Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22125.t1 | XP_013459546.1 | 93.5 | 371 | 24 | 0 | 1 | 371 | 1 | 371 | 1.70E-203 | 718.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22125.t1 | Q9FJ45 | 45.2 | 374 | 189 | 9 | 1 | 362 | 1 | 370 | 6.4e-82 | 305.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22125.t1 | A0A072UVC7 | 93.5 | 371 | 24 | 0 | 1 | 371 | 1 | 371 | 1.2e-203 | 718.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene002553 | MS.gene22125 | PPI |
MS.gene004227 | MS.gene22125 | PPI |
MS.gene01535 | MS.gene22125 | PPI |
MS.gene22125 | MS.gene54326 | PPI |
MS.gene54325 | MS.gene22125 | PPI |
MS.gene22125 | MS.gene002554 | PPI |
MS.gene004228 | MS.gene22125 | PPI |
MS.gene01536 | MS.gene22125 | PPI |
MS.gene22125 | MS.gene002555 | PPI |
MS.gene54327 | MS.gene22125 | PPI |
MS.gene01537 | MS.gene22125 | PPI |
MS.gene22125 | MS.gene004229 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22125.t1 | MTR_3g448360 | 93.531 | 371 | 24 | 0 | 1 | 371 | 1 | 371 | 0.0 | 721 |
MS.gene22125.t1 | MTR_3g069780 | 79.893 | 373 | 71 | 3 | 1 | 371 | 1 | 371 | 0.0 | 600 |
MS.gene22125.t1 | MTR_3g438030 | 79.357 | 373 | 73 | 3 | 1 | 371 | 1 | 371 | 0.0 | 597 |
MS.gene22125.t1 | MTR_3g069520 | 77.419 | 372 | 80 | 3 | 1 | 371 | 1 | 369 | 0.0 | 582 |
MS.gene22125.t1 | MTR_3g463960 | 66.667 | 387 | 111 | 5 | 1 | 370 | 2 | 387 | 0.0 | 517 |
MS.gene22125.t1 | MTR_3g463950 | 66.667 | 387 | 111 | 5 | 1 | 370 | 2 | 387 | 0.0 | 517 |
MS.gene22125.t1 | MTR_3g463970 | 66.667 | 387 | 111 | 5 | 1 | 370 | 2 | 387 | 0.0 | 517 |
MS.gene22125.t1 | MTR_3g463940 | 66.667 | 387 | 111 | 5 | 1 | 370 | 2 | 387 | 0.0 | 517 |
MS.gene22125.t1 | MTR_2g079090 | 68.548 | 372 | 101 | 6 | 1 | 370 | 1 | 358 | 5.99e-178 | 498 |
MS.gene22125.t1 | MTR_3g463930 | 64.557 | 395 | 113 | 7 | 1 | 370 | 2 | 394 | 7.45e-177 | 497 |
MS.gene22125.t1 | MTR_0029s0050 | 68.280 | 372 | 102 | 6 | 1 | 370 | 1 | 358 | 5.68e-176 | 493 |
MS.gene22125.t1 | MTR_2g079080 | 67.473 | 372 | 105 | 6 | 1 | 370 | 1 | 358 | 5.59e-175 | 491 |
MS.gene22125.t1 | MTR_0029s0100 | 67.742 | 372 | 104 | 6 | 1 | 370 | 1 | 358 | 7.64e-174 | 488 |
MS.gene22125.t1 | MTR_2g043980 | 60.322 | 373 | 128 | 6 | 1 | 371 | 7 | 361 | 6.24e-152 | 432 |
MS.gene22125.t1 | MTR_2g015650 | 51.467 | 375 | 168 | 7 | 5 | 371 | 6 | 374 | 8.93e-126 | 367 |
MS.gene22125.t1 | MTR_2g015670 | 50.696 | 359 | 154 | 8 | 17 | 370 | 19 | 359 | 3.28e-114 | 337 |
MS.gene22125.t1 | MTR_2g015630 | 47.839 | 347 | 166 | 7 | 34 | 371 | 36 | 376 | 4.51e-101 | 304 |
MS.gene22125.t1 | MTR_2g015580 | 43.902 | 369 | 186 | 7 | 10 | 364 | 22 | 383 | 2.30e-99 | 300 |
MS.gene22125.t1 | MTR_2g043990 | 53.401 | 294 | 110 | 5 | 1 | 292 | 69 | 337 | 5.73e-97 | 292 |
MS.gene22125.t1 | MTR_2g015590 | 44.282 | 341 | 180 | 5 | 27 | 361 | 29 | 365 | 2.37e-92 | 281 |
MS.gene22125.t1 | MTR_3g466240 | 59.276 | 221 | 59 | 2 | 102 | 319 | 2 | 194 | 1.79e-81 | 247 |
MS.gene22125.t1 | MTR_2g015590 | 44.485 | 272 | 145 | 3 | 27 | 293 | 29 | 299 | 3.54e-70 | 223 |
MS.gene22125.t1 | MTR_4g104240 | 35.967 | 367 | 208 | 13 | 5 | 361 | 18 | 367 | 2.47e-62 | 204 |
MS.gene22125.t1 | MTR_3g466190 | 60.571 | 175 | 44 | 4 | 56 | 226 | 7 | 160 | 3.37e-60 | 194 |
MS.gene22125.t1 | MTR_3g466190 | 78.205 | 78 | 17 | 0 | 294 | 371 | 152 | 229 | 3.21e-35 | 129 |
MS.gene22125.t1 | MTR_7g087190 | 34.031 | 382 | 197 | 16 | 19 | 370 | 33 | 389 | 3.93e-52 | 178 |
MS.gene22125.t1 | MTR_1g030220 | 35.574 | 357 | 194 | 11 | 27 | 363 | 38 | 378 | 2.60e-49 | 171 |
MS.gene22125.t1 | MTR_8g028160 | 34.903 | 361 | 207 | 12 | 18 | 361 | 25 | 374 | 8.66e-48 | 166 |
MS.gene22125.t1 | MTR_6g007090 | 31.759 | 381 | 223 | 10 | 1 | 361 | 7 | 370 | 1.48e-46 | 163 |
MS.gene22125.t1 | MTR_1g030268 | 35.112 | 356 | 195 | 13 | 27 | 363 | 38 | 376 | 6.05e-46 | 162 |
MS.gene22125.t1 | MTR_7g116870 | 33.241 | 361 | 204 | 13 | 27 | 369 | 31 | 372 | 1.18e-45 | 160 |
MS.gene22125.t1 | MTR_1g030340 | 33.163 | 392 | 213 | 15 | 4 | 370 | 18 | 385 | 1.68e-45 | 160 |
MS.gene22125.t1 | MTR_8g089805 | 32.283 | 381 | 207 | 15 | 15 | 363 | 20 | 381 | 3.17e-45 | 160 |
MS.gene22125.t1 | MTR_7g111780 | 34.985 | 343 | 195 | 13 | 29 | 363 | 36 | 358 | 5.78e-45 | 158 |
MS.gene22125.t1 | MTR_7g033165 | 34.174 | 357 | 198 | 12 | 27 | 362 | 31 | 371 | 6.55e-45 | 159 |
MS.gene22125.t1 | MTR_1g030275 | 34.746 | 354 | 191 | 13 | 27 | 357 | 37 | 373 | 1.49e-42 | 152 |
MS.gene22125.t1 | MTR_1g030230 | 33.151 | 365 | 208 | 12 | 19 | 363 | 22 | 370 | 3.50e-41 | 149 |
MS.gene22125.t1 | MTR_7g113860 | 31.452 | 372 | 202 | 15 | 19 | 361 | 25 | 372 | 1.20e-40 | 147 |
MS.gene22125.t1 | MTR_7g033150 | 32.090 | 402 | 216 | 16 | 1 | 366 | 1 | 381 | 7.90e-40 | 145 |
MS.gene22125.t1 | MTR_7g113860 | 32.086 | 374 | 205 | 15 | 15 | 361 | 15 | 366 | 7.96e-40 | 145 |
MS.gene22125.t1 | MTR_6g007095 | 30.769 | 390 | 226 | 11 | 1 | 367 | 7 | 375 | 8.30e-39 | 147 |
MS.gene22125.t1 | MTR_6g007095 | 28.375 | 363 | 211 | 11 | 22 | 363 | 356 | 690 | 4.40e-26 | 110 |
MS.gene22125.t1 | MTR_7g033155 | 32.300 | 387 | 200 | 15 | 21 | 366 | 30 | 395 | 2.23e-38 | 142 |
MS.gene22125.t1 | MTR_1g030268 | 35.612 | 278 | 156 | 9 | 27 | 293 | 38 | 303 | 4.45e-36 | 134 |
MS.gene22125.t1 | MTR_1g082390 | 30.053 | 376 | 227 | 14 | 5 | 363 | 13 | 369 | 5.73e-36 | 134 |
MS.gene22125.t1 | MTR_8g031420 | 29.919 | 371 | 216 | 14 | 2 | 356 | 5 | 347 | 1.70e-32 | 125 |
MS.gene22125.t1 | MTR_7g033165 | 35.472 | 265 | 152 | 8 | 27 | 280 | 31 | 287 | 1.76e-32 | 124 |
MS.gene22125.t1 | MTR_8g031390 | 29.240 | 342 | 208 | 14 | 24 | 356 | 32 | 348 | 3.49e-32 | 124 |
MS.gene22125.t1 | MTR_8g038680 | 28.691 | 359 | 212 | 12 | 27 | 361 | 26 | 364 | 1.06e-31 | 123 |
MS.gene22125.t1 | MTR_8g031430 | 29.885 | 348 | 199 | 15 | 24 | 356 | 32 | 349 | 1.08e-31 | 123 |
MS.gene22125.t1 | MTR_8g022810 | 30.791 | 354 | 192 | 16 | 28 | 360 | 40 | 361 | 4.18e-31 | 122 |
MS.gene22125.t1 | MTR_6g007100 | 30.233 | 387 | 213 | 18 | 1 | 367 | 7 | 356 | 9.54e-31 | 120 |
MS.gene22125.t1 | MTR_8g031400 | 30.058 | 346 | 201 | 13 | 24 | 356 | 32 | 349 | 2.71e-30 | 119 |
MS.gene22125.t1 | MTR_7g111780 | 33.582 | 268 | 154 | 10 | 103 | 363 | 9 | 259 | 6.97e-30 | 115 |
MS.gene22125.t1 | MTR_4g056160 | 29.970 | 337 | 206 | 11 | 29 | 354 | 27 | 344 | 3.47e-28 | 113 |
MS.gene22125.t1 | MTR_4g056280 | 29.839 | 372 | 224 | 13 | 1 | 363 | 8 | 351 | 2.02e-27 | 111 |
MS.gene22125.t1 | MTR_8g031390 | 29.492 | 295 | 179 | 12 | 24 | 313 | 32 | 302 | 4.47e-27 | 109 |
MS.gene22125.t1 | MTR_1g025780 | 28.533 | 368 | 222 | 16 | 1 | 355 | 15 | 354 | 4.98e-27 | 110 |
MS.gene22125.t1 | MTR_8g014910 | 29.296 | 355 | 211 | 13 | 15 | 354 | 18 | 347 | 7.02e-26 | 107 |
MS.gene22125.t1 | MTR_1g030265 | 31.683 | 303 | 169 | 12 | 79 | 357 | 53 | 341 | 1.87e-25 | 105 |
MS.gene22125.t1 | MTR_2g033930 | 27.763 | 371 | 234 | 11 | 1 | 362 | 8 | 353 | 1.96e-25 | 105 |
MS.gene22125.t1 | MTR_2g044100 | 27.614 | 373 | 223 | 14 | 3 | 356 | 17 | 361 | 3.10e-25 | 105 |
MS.gene22125.t1 | MTR_1g025680 | 29.855 | 345 | 195 | 15 | 29 | 355 | 34 | 349 | 7.45e-25 | 105 |
MS.gene22125.t1 | MTR_8g089805 | 28.289 | 304 | 179 | 12 | 84 | 363 | 25 | 313 | 1.61e-24 | 102 |
MS.gene22125.t1 | MTR_3g052490 | 28.495 | 372 | 219 | 16 | 3 | 358 | 12 | 352 | 1.72e-24 | 103 |
MS.gene22125.t1 | MTR_2g100620 | 27.219 | 338 | 212 | 11 | 29 | 354 | 31 | 346 | 1.86e-24 | 103 |
MS.gene22125.t1 | MTR_2g015080 | 27.717 | 368 | 218 | 16 | 3 | 349 | 16 | 356 | 2.25e-24 | 103 |
MS.gene22125.t1 | MTR_5g078210 | 27.164 | 335 | 199 | 13 | 33 | 351 | 29 | 334 | 3.14e-23 | 99.8 |
MS.gene22125.t1 | MTR_5g022630 | 29.096 | 354 | 214 | 13 | 9 | 349 | 25 | 354 | 3.93e-23 | 99.8 |
MS.gene22125.t1 | MTR_1g025700 | 29.462 | 353 | 208 | 15 | 16 | 355 | 40 | 364 | 5.31e-23 | 99.4 |
MS.gene22125.t1 | MTR_8g079050 | 28.647 | 377 | 215 | 17 | 3 | 356 | 15 | 360 | 1.36e-22 | 98.2 |
MS.gene22125.t1 | MTR_1g025720 | 29.248 | 359 | 209 | 16 | 3 | 347 | 16 | 343 | 1.67e-22 | 97.8 |
MS.gene22125.t1 | MTR_3g098270 | 27.968 | 379 | 224 | 18 | 1 | 357 | 3 | 354 | 2.05e-22 | 97.8 |
MS.gene22125.t1 | MTR_8g012540 | 28.383 | 303 | 196 | 9 | 27 | 320 | 26 | 316 | 2.14e-22 | 97.1 |
MS.gene22125.t1 | MTR_7g113860 | 28.296 | 311 | 177 | 13 | 77 | 361 | 8 | 298 | 6.99e-22 | 95.1 |
MS.gene22125.t1 | MTR_1g025760 | 29.412 | 340 | 203 | 14 | 29 | 355 | 80 | 395 | 1.43e-21 | 95.5 |
MS.gene22125.t1 | MTR_2g033920 | 29.213 | 356 | 200 | 14 | 28 | 362 | 34 | 358 | 1.72e-21 | 94.7 |
MS.gene22125.t1 | MTR_5g009100 | 26.844 | 339 | 217 | 12 | 31 | 359 | 48 | 365 | 1.82e-21 | 95.1 |
MS.gene22125.t1 | MTR_4g035353 | 26.124 | 356 | 224 | 14 | 16 | 357 | 18 | 348 | 3.17e-21 | 94.0 |
MS.gene22125.t1 | MTR_5g078210 | 27.327 | 333 | 185 | 12 | 33 | 351 | 29 | 318 | 3.90e-21 | 93.2 |
MS.gene22125.t1 | MTR_3g052580 | 27.763 | 371 | 221 | 17 | 3 | 358 | 9 | 347 | 6.60e-21 | 93.6 |
MS.gene22125.t1 | MTR_5g074270 | 28.487 | 337 | 208 | 14 | 27 | 351 | 31 | 346 | 9.13e-21 | 92.8 |
MS.gene22125.t1 | MTR_3g052580 | 27.763 | 371 | 221 | 17 | 3 | 358 | 8 | 346 | 1.01e-20 | 93.2 |
MS.gene22125.t1 | MTR_8g022790 | 25.364 | 343 | 217 | 9 | 24 | 356 | 32 | 345 | 1.04e-20 | 92.4 |
MS.gene22125.t1 | MTR_3g435540 | 27.348 | 362 | 213 | 13 | 31 | 367 | 25 | 361 | 1.28e-20 | 92.4 |
MS.gene22125.t1 | MTR_4g108690 | 26.979 | 341 | 206 | 13 | 31 | 355 | 29 | 342 | 1.36e-20 | 92.4 |
MS.gene22125.t1 | MTR_5g084750 | 27.327 | 333 | 195 | 14 | 29 | 343 | 30 | 333 | 4.22e-20 | 90.9 |
MS.gene22125.t1 | MTR_5g084790 | 29.226 | 349 | 192 | 17 | 29 | 355 | 32 | 347 | 7.12e-20 | 90.1 |
MS.gene22125.t1 | MTR_4g087985 | 27.966 | 354 | 206 | 15 | 29 | 356 | 36 | 366 | 7.58e-20 | 90.1 |
MS.gene22125.t1 | MTR_3g082830 | 27.429 | 350 | 205 | 14 | 29 | 359 | 38 | 357 | 8.02e-20 | 90.1 |
MS.gene22125.t1 | MTR_5g084770 | 27.882 | 373 | 215 | 16 | 3 | 354 | 4 | 343 | 1.05e-19 | 89.7 |
MS.gene22125.t1 | MTR_5g083040 | 28.190 | 337 | 213 | 13 | 29 | 353 | 32 | 351 | 2.24e-19 | 88.6 |
MS.gene22125.t1 | MTR_5g093090 | 26.790 | 377 | 223 | 16 | 4 | 362 | 11 | 352 | 3.04e-19 | 88.2 |
MS.gene22125.t1 | MTR_3g464730 | 26.273 | 373 | 227 | 14 | 1 | 355 | 2 | 344 | 3.09e-19 | 88.2 |
MS.gene22125.t1 | MTR_3g114090 | 29.023 | 348 | 198 | 18 | 27 | 355 | 34 | 351 | 3.90e-19 | 88.2 |
MS.gene22125.t1 | MTR_0009s0250 | 26.899 | 316 | 191 | 11 | 4 | 306 | 5 | 293 | 6.03e-19 | 87.4 |
MS.gene22125.t1 | MTR_3g005650 | 27.576 | 330 | 197 | 15 | 29 | 345 | 30 | 330 | 1.08e-18 | 86.7 |
MS.gene22125.t1 | MTR_5g022640 | 27.671 | 365 | 227 | 14 | 6 | 355 | 17 | 359 | 4.70e-18 | 85.1 |
MS.gene22125.t1 | MTR_4g122200 | 27.949 | 390 | 219 | 19 | 1 | 369 | 15 | 363 | 7.18e-18 | 84.3 |
MS.gene22125.t1 | MTR_1g060490 | 24.260 | 338 | 213 | 11 | 26 | 353 | 34 | 338 | 3.33e-17 | 82.4 |
MS.gene22125.t1 | MTR_1g060500 | 25.073 | 343 | 212 | 14 | 26 | 353 | 37 | 349 | 6.68e-17 | 81.6 |
MS.gene22125.t1 | MTR_8g022810 | 33.816 | 207 | 109 | 10 | 28 | 221 | 40 | 231 | 7.02e-17 | 80.9 |
MS.gene22125.t1 | MTR_2g084585 | 26.190 | 336 | 217 | 11 | 29 | 354 | 30 | 344 | 8.14e-17 | 81.3 |
MS.gene22125.t1 | MTR_1g024890 | 25.858 | 379 | 217 | 18 | 8 | 356 | 4 | 348 | 1.00e-16 | 80.9 |
MS.gene22125.t1 | MTR_7g116520 | 26.437 | 348 | 207 | 16 | 28 | 356 | 33 | 350 | 1.10e-16 | 80.9 |
MS.gene22125.t1 | MTR_1g092750 | 24.848 | 330 | 206 | 11 | 30 | 349 | 41 | 338 | 1.27e-16 | 80.5 |
MS.gene22125.t1 | MTR_3g021460 | 24.484 | 339 | 217 | 9 | 29 | 359 | 31 | 338 | 1.52e-16 | 80.5 |
MS.gene22125.t1 | MTR_3g114120 | 27.941 | 340 | 197 | 15 | 29 | 350 | 47 | 356 | 1.91e-16 | 80.1 |
MS.gene22125.t1 | MTR_8g075220 | 24.479 | 384 | 237 | 13 | 1 | 355 | 1 | 360 | 2.30e-15 | 77.0 |
MS.gene22125.t1 | MTR_1g069175 | 26.146 | 371 | 227 | 15 | 9 | 358 | 9 | 353 | 3.24e-15 | 76.6 |
MS.gene22125.t1 | MTR_2g033920 | 28.470 | 281 | 167 | 11 | 28 | 293 | 34 | 295 | 2.98e-14 | 73.2 |
MS.gene22125.t1 | MTR_2g461580 | 23.181 | 371 | 240 | 11 | 1 | 359 | 1 | 338 | 3.27e-14 | 73.6 |
MS.gene22125.t1 | MTR_5g093090 | 26.452 | 310 | 182 | 13 | 4 | 295 | 11 | 292 | 4.03e-14 | 72.8 |
MS.gene22125.t1 | MTR_1g092740 | 24.478 | 335 | 212 | 12 | 30 | 353 | 39 | 343 | 5.34e-14 | 72.8 |
MS.gene22125.t1 | MTR_3g023220 | 24.695 | 328 | 199 | 11 | 30 | 345 | 34 | 325 | 1.20e-12 | 68.9 |
MS.gene22125.t1 | MTR_1g060520 | 23.894 | 339 | 185 | 13 | 26 | 353 | 37 | 313 | 4.79e-12 | 66.6 |
MS.gene22125.t1 | MTR_2g017965 | 25.000 | 340 | 200 | 15 | 30 | 350 | 34 | 337 | 5.33e-12 | 67.0 |
MS.gene22125.t1 | MTR_8g074580 | 24.155 | 414 | 225 | 15 | 3 | 356 | 19 | 403 | 8.71e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22125.t1 | AT5G45910 | 45.187 | 374 | 189 | 9 | 1 | 362 | 1 | 370 | 7.03e-102 | 306 |
MS.gene22125.t1 | AT1G31550 | 42.318 | 371 | 193 | 11 | 1 | 361 | 10 | 369 | 5.27e-87 | 268 |
MS.gene22125.t1 | AT1G28600 | 42.778 | 360 | 190 | 10 | 11 | 361 | 12 | 364 | 6.42e-87 | 268 |
MS.gene22125.t1 | AT1G28610 | 41.689 | 367 | 198 | 9 | 6 | 363 | 7 | 366 | 8.26e-87 | 268 |
MS.gene22125.t1 | AT1G28590 | 41.618 | 346 | 188 | 7 | 27 | 364 | 34 | 373 | 5.44e-85 | 263 |
MS.gene22125.t1 | AT1G28570 | 40.701 | 371 | 202 | 9 | 1 | 361 | 6 | 368 | 1.21e-84 | 262 |
MS.gene22125.t1 | AT2G27360 | 42.319 | 345 | 182 | 9 | 27 | 361 | 31 | 368 | 1.69e-83 | 259 |
MS.gene22125.t1 | AT1G31550 | 41.779 | 371 | 192 | 12 | 1 | 361 | 10 | 366 | 2.49e-83 | 259 |
MS.gene22125.t1 | AT1G28580 | 41.618 | 346 | 182 | 8 | 27 | 361 | 35 | 371 | 1.35e-82 | 257 |
MS.gene22125.t1 | AT1G28640 | 40.462 | 346 | 190 | 8 | 27 | 363 | 33 | 371 | 6.50e-80 | 250 |
MS.gene22125.t1 | AT1G28670 | 41.429 | 350 | 182 | 10 | 27 | 363 | 33 | 372 | 5.46e-79 | 248 |
MS.gene22125.t1 | AT1G28660 | 39.678 | 373 | 199 | 11 | 3 | 363 | 13 | 371 | 4.58e-78 | 245 |
MS.gene22125.t1 | AT1G28660 | 39.678 | 373 | 198 | 12 | 3 | 363 | 13 | 370 | 3.33e-77 | 243 |
MS.gene22125.t1 | AT1G28650 | 41.143 | 350 | 182 | 11 | 27 | 363 | 35 | 373 | 4.22e-77 | 243 |
MS.gene22125.t1 | AT1G28580 | 39.661 | 295 | 162 | 7 | 74 | 361 | 5 | 290 | 5.69e-65 | 209 |
MS.gene22125.t1 | AT3G48460 | 37.714 | 350 | 188 | 11 | 26 | 361 | 35 | 368 | 7.24e-62 | 203 |
MS.gene22125.t1 | AT5G03980 | 36.628 | 344 | 165 | 12 | 15 | 353 | 15 | 310 | 2.60e-54 | 182 |
MS.gene22125.t1 | AT5G14450 | 32.987 | 385 | 214 | 13 | 3 | 367 | 21 | 381 | 7.56e-47 | 164 |
MS.gene22125.t1 | AT1G56670 | 32.398 | 392 | 216 | 15 | 1 | 368 | 1 | 367 | 8.62e-46 | 161 |
MS.gene22125.t1 | AT1G28570 | 39.720 | 214 | 118 | 5 | 154 | 361 | 88 | 296 | 1.37e-45 | 159 |
MS.gene22125.t1 | AT1G28570 | 43.902 | 82 | 42 | 2 | 1 | 78 | 6 | 87 | 7.26e-11 | 63.2 |
MS.gene22125.t1 | AT1G28570 | 40.000 | 210 | 115 | 5 | 158 | 361 | 1 | 205 | 2.92e-45 | 155 |
MS.gene22125.t1 | AT4G01130 | 32.773 | 357 | 202 | 12 | 27 | 361 | 32 | 372 | 5.98e-44 | 156 |
MS.gene22125.t1 | AT1G67830 | 33.978 | 362 | 194 | 15 | 20 | 353 | 21 | 365 | 9.10e-44 | 155 |
MS.gene22125.t1 | AT1G54790 | 32.632 | 380 | 213 | 16 | 3 | 361 | 12 | 369 | 4.39e-42 | 151 |
MS.gene22125.t1 | AT1G09390 | 31.909 | 351 | 205 | 13 | 29 | 368 | 37 | 364 | 8.64e-40 | 145 |
MS.gene22125.t1 | AT3G62280 | 31.638 | 354 | 203 | 12 | 20 | 361 | 31 | 357 | 1.05e-39 | 144 |
MS.gene22125.t1 | AT3G26430 | 31.653 | 357 | 211 | 12 | 27 | 363 | 29 | 372 | 1.57e-39 | 144 |
MS.gene22125.t1 | AT1G28600 | 42.289 | 201 | 105 | 7 | 11 | 204 | 12 | 208 | 8.21e-39 | 138 |
MS.gene22125.t1 | AT3G05180 | 31.609 | 348 | 207 | 12 | 27 | 356 | 34 | 368 | 4.04e-38 | 140 |
MS.gene22125.t1 | AT1G54790 | 31.538 | 390 | 211 | 17 | 1 | 361 | 6 | 368 | 1.13e-37 | 139 |
MS.gene22125.t1 | AT1G28610 | 40.580 | 207 | 107 | 8 | 6 | 204 | 7 | 205 | 4.77e-35 | 129 |
MS.gene22125.t1 | AT1G54790 | 29.854 | 412 | 215 | 18 | 1 | 361 | 6 | 394 | 5.51e-35 | 133 |
MS.gene22125.t1 | AT3G27950 | 31.016 | 374 | 219 | 13 | 9 | 363 | 11 | 364 | 5.03e-34 | 129 |
MS.gene22125.t1 | AT4G01130 | 33.692 | 279 | 161 | 8 | 27 | 293 | 32 | 298 | 8.13e-34 | 128 |
MS.gene22125.t1 | AT1G56670 | 31.429 | 315 | 176 | 11 | 1 | 293 | 1 | 297 | 2.42e-32 | 123 |
MS.gene22125.t1 | AT5G40990 | 30.645 | 372 | 218 | 14 | 4 | 358 | 11 | 359 | 5.48e-31 | 121 |
MS.gene22125.t1 | AT3G14225 | 27.907 | 344 | 211 | 11 | 29 | 357 | 37 | 358 | 4.15e-30 | 119 |
MS.gene22125.t1 | AT5G45950 | 30.904 | 343 | 194 | 13 | 29 | 358 | 40 | 352 | 7.04e-30 | 118 |
MS.gene22125.t1 | AT2G40250 | 29.041 | 365 | 219 | 13 | 3 | 350 | 9 | 350 | 1.34e-29 | 117 |
MS.gene22125.t1 | AT3G14225 | 27.907 | 344 | 215 | 11 | 29 | 357 | 37 | 362 | 2.45e-29 | 117 |
MS.gene22125.t1 | AT1G71120 | 26.765 | 340 | 209 | 11 | 29 | 356 | 31 | 342 | 5.04e-29 | 115 |
MS.gene22125.t1 | AT1G06990 | 28.652 | 356 | 224 | 13 | 10 | 355 | 18 | 353 | 2.91e-27 | 110 |
MS.gene22125.t1 | AT1G53940 | 30.814 | 344 | 203 | 14 | 29 | 358 | 39 | 361 | 3.49e-27 | 111 |
MS.gene22125.t1 | AT4G10950 | 27.616 | 344 | 215 | 13 | 25 | 356 | 66 | 387 | 3.56e-27 | 111 |
MS.gene22125.t1 | AT1G75920 | 29.679 | 374 | 201 | 16 | 1 | 355 | 6 | 336 | 4.12e-27 | 110 |
MS.gene22125.t1 | AT1G53920 | 28.852 | 357 | 213 | 15 | 29 | 370 | 48 | 378 | 4.77e-27 | 110 |
MS.gene22125.t1 | AT1G53990 | 26.738 | 374 | 227 | 13 | 1 | 357 | 6 | 349 | 5.48e-27 | 110 |
MS.gene22125.t1 | AT3G62280 | 30.035 | 283 | 167 | 9 | 20 | 293 | 31 | 291 | 2.06e-26 | 107 |
MS.gene22125.t1 | AT1G20120 | 28.696 | 345 | 203 | 12 | 27 | 355 | 76 | 393 | 2.21e-25 | 106 |
MS.gene22125.t1 | AT1G20132 | 29.204 | 339 | 205 | 13 | 29 | 355 | 61 | 376 | 9.58e-25 | 104 |
MS.gene22125.t1 | AT4G10950 | 27.326 | 344 | 212 | 14 | 25 | 356 | 66 | 383 | 1.53e-24 | 103 |
MS.gene22125.t1 | AT1G73610 | 27.415 | 383 | 212 | 16 | 1 | 359 | 1 | 341 | 1.13e-23 | 100 |
MS.gene22125.t1 | AT1G75920 | 29.156 | 391 | 196 | 18 | 1 | 355 | 1 | 346 | 1.57e-23 | 100 |
MS.gene22125.t1 | AT1G23500 | 26.934 | 349 | 200 | 13 | 28 | 360 | 34 | 343 | 2.66e-23 | 99.8 |
MS.gene22125.t1 | AT2G03980 | 29.573 | 328 | 200 | 13 | 27 | 345 | 41 | 346 | 1.58e-22 | 97.8 |
MS.gene22125.t1 | AT2G03980 | 29.573 | 328 | 200 | 13 | 27 | 345 | 41 | 346 | 1.58e-22 | 97.8 |
MS.gene22125.t1 | AT2G03980 | 29.573 | 328 | 200 | 13 | 27 | 345 | 41 | 346 | 1.58e-22 | 97.8 |
MS.gene22125.t1 | AT2G03980 | 29.573 | 328 | 200 | 13 | 27 | 345 | 41 | 346 | 1.58e-22 | 97.8 |
MS.gene22125.t1 | AT2G04570 | 26.431 | 367 | 221 | 14 | 6 | 354 | 7 | 342 | 7.41e-22 | 95.9 |
MS.gene22125.t1 | AT3G09930 | 26.409 | 337 | 216 | 10 | 20 | 349 | 30 | 341 | 8.17e-22 | 95.5 |
MS.gene22125.t1 | AT3G09930 | 26.409 | 337 | 216 | 10 | 20 | 349 | 30 | 341 | 8.17e-22 | 95.5 |
MS.gene22125.t1 | AT5G45960 | 25.788 | 349 | 204 | 15 | 29 | 353 | 47 | 364 | 9.11e-22 | 95.9 |
MS.gene22125.t1 | AT2G42990 | 29.448 | 326 | 197 | 13 | 29 | 343 | 28 | 331 | 1.44e-21 | 95.1 |
MS.gene22125.t1 | AT5G42170 | 29.217 | 332 | 209 | 10 | 29 | 354 | 50 | 361 | 1.48e-21 | 95.1 |
MS.gene22125.t1 | AT1G75920 | 28.972 | 321 | 168 | 14 | 55 | 355 | 28 | 308 | 1.51e-21 | 94.4 |
MS.gene22125.t1 | AT4G01130 | 26.846 | 298 | 186 | 10 | 84 | 361 | 1 | 286 | 8.22e-21 | 92.0 |
MS.gene22125.t1 | AT3G16370 | 26.488 | 336 | 217 | 11 | 29 | 354 | 30 | 345 | 1.89e-20 | 91.7 |
MS.gene22125.t1 | AT1G71250 | 25.882 | 340 | 225 | 11 | 29 | 360 | 41 | 361 | 1.90e-20 | 92.0 |
MS.gene22125.t1 | AT1G58430 | 27.869 | 366 | 224 | 17 | 4 | 353 | 9 | 350 | 2.70e-20 | 91.3 |
MS.gene22125.t1 | AT5G15720 | 26.801 | 347 | 195 | 15 | 29 | 350 | 30 | 342 | 4.63e-20 | 90.9 |
MS.gene22125.t1 | AT1G75930 | 27.966 | 354 | 190 | 16 | 27 | 353 | 27 | 342 | 4.80e-20 | 90.5 |
MS.gene22125.t1 | AT3G14820 | 28.909 | 339 | 200 | 14 | 29 | 354 | 32 | 342 | 7.01e-20 | 90.1 |
MS.gene22125.t1 | AT5G08460 | 26.807 | 332 | 208 | 11 | 27 | 344 | 47 | 357 | 1.13e-19 | 90.1 |
MS.gene22125.t1 | AT5G03610 | 23.577 | 369 | 247 | 11 | 3 | 360 | 11 | 355 | 2.19e-19 | 89.0 |
MS.gene22125.t1 | AT1G20130 | 26.934 | 349 | 207 | 14 | 29 | 355 | 204 | 526 | 2.32e-19 | 90.1 |
MS.gene22125.t1 | AT1G20130 | 26.934 | 349 | 207 | 14 | 29 | 355 | 184 | 506 | 2.42e-19 | 89.7 |
MS.gene22125.t1 | AT2G23540 | 29.345 | 351 | 198 | 16 | 29 | 356 | 48 | 371 | 2.56e-19 | 89.0 |
MS.gene22125.t1 | AT1G75880 | 27.297 | 370 | 230 | 14 | 4 | 355 | 20 | 368 | 3.83e-19 | 88.2 |
MS.gene22125.t1 | AT2G30310 | 28.846 | 364 | 218 | 18 | 3 | 350 | 8 | 346 | 3.89e-19 | 88.2 |
MS.gene22125.t1 | AT1G75910 | 26.542 | 373 | 210 | 16 | 3 | 355 | 8 | 336 | 4.12e-19 | 87.8 |
MS.gene22125.t1 | AT1G75900 | 26.944 | 360 | 229 | 12 | 6 | 354 | 20 | 356 | 1.12e-18 | 86.7 |
MS.gene22125.t1 | AT3G04290 | 27.322 | 366 | 224 | 14 | 6 | 358 | 11 | 347 | 1.34e-18 | 86.7 |
MS.gene22125.t1 | AT1G75880 | 27.688 | 372 | 225 | 16 | 4 | 355 | 20 | 367 | 1.44e-18 | 86.7 |
MS.gene22125.t1 | AT1G20135 | 25.595 | 336 | 201 | 12 | 27 | 349 | 27 | 326 | 1.54e-18 | 85.9 |
MS.gene22125.t1 | AT1G75890 | 27.381 | 336 | 216 | 12 | 29 | 355 | 47 | 363 | 1.55e-18 | 86.3 |
MS.gene22125.t1 | AT1G75890 | 27.381 | 336 | 216 | 12 | 29 | 355 | 76 | 392 | 3.08e-18 | 85.9 |
MS.gene22125.t1 | AT1G59406 | 27.224 | 371 | 225 | 15 | 1 | 355 | 1 | 342 | 3.21e-18 | 85.1 |
MS.gene22125.t1 | AT1G59030 | 27.224 | 371 | 225 | 15 | 1 | 355 | 1 | 342 | 3.21e-18 | 85.1 |
MS.gene22125.t1 | AT1G58725 | 27.224 | 371 | 225 | 15 | 1 | 355 | 1 | 342 | 3.21e-18 | 85.1 |
MS.gene22125.t1 | AT5G22810 | 26.776 | 366 | 234 | 14 | 1 | 354 | 8 | 351 | 3.95e-18 | 85.1 |
MS.gene22125.t1 | AT1G75920 | 26.776 | 366 | 191 | 14 | 1 | 355 | 6 | 305 | 4.67e-18 | 84.3 |
MS.gene22125.t1 | AT2G31540 | 28.571 | 350 | 210 | 16 | 20 | 353 | 25 | 350 | 5.99e-18 | 84.7 |
MS.gene22125.t1 | AT5G63170 | 25.305 | 328 | 202 | 12 | 29 | 346 | 28 | 322 | 6.85e-18 | 84.3 |
MS.gene22125.t1 | AT4G26790 | 25.872 | 344 | 214 | 12 | 27 | 355 | 27 | 344 | 8.55e-18 | 84.0 |
MS.gene22125.t1 | AT4G26790 | 25.872 | 344 | 214 | 12 | 27 | 355 | 27 | 344 | 8.55e-18 | 84.0 |
MS.gene22125.t1 | AT2G24560 | 26.074 | 349 | 220 | 14 | 20 | 353 | 24 | 349 | 9.77e-18 | 84.0 |
MS.gene22125.t1 | AT1G74460 | 26.329 | 395 | 218 | 17 | 3 | 367 | 6 | 357 | 1.43e-17 | 83.6 |
MS.gene22125.t1 | AT5G03820 | 26.230 | 366 | 238 | 15 | 1 | 354 | 4 | 349 | 3.18e-17 | 82.4 |
MS.gene22125.t1 | AT1G54020 | 25.706 | 354 | 216 | 17 | 16 | 360 | 21 | 336 | 3.48e-17 | 82.4 |
MS.gene22125.t1 | AT1G29670 | 28.150 | 373 | 216 | 18 | 5 | 359 | 11 | 349 | 3.96e-17 | 82.4 |
MS.gene22125.t1 | AT1G29670 | 27.151 | 372 | 221 | 17 | 5 | 359 | 79 | 417 | 5.45e-17 | 82.4 |
MS.gene22125.t1 | AT5G03820 | 25.956 | 366 | 239 | 15 | 1 | 354 | 32 | 377 | 7.21e-17 | 81.6 |
MS.gene22125.t1 | AT2G30220 | 27.913 | 369 | 214 | 17 | 3 | 350 | 8 | 345 | 9.57e-17 | 81.3 |
MS.gene22125.t1 | AT1G53940 | 29.496 | 278 | 166 | 10 | 28 | 293 | 38 | 297 | 1.08e-16 | 80.1 |
MS.gene22125.t1 | AT5G15720 | 25.965 | 285 | 169 | 11 | 29 | 293 | 30 | 292 | 1.92e-16 | 79.7 |
MS.gene22125.t1 | AT2G19010 | 28.116 | 345 | 197 | 16 | 31 | 361 | 62 | 369 | 2.07e-16 | 80.1 |
MS.gene22125.t1 | AT2G19010 | 28.116 | 345 | 197 | 16 | 31 | 361 | 32 | 339 | 2.35e-16 | 79.7 |
MS.gene22125.t1 | AT5G55050 | 27.515 | 338 | 205 | 15 | 29 | 349 | 39 | 353 | 2.79e-16 | 79.7 |
MS.gene22125.t1 | AT3G53100 | 26.331 | 338 | 214 | 14 | 29 | 354 | 29 | 343 | 2.90e-16 | 79.7 |
MS.gene22125.t1 | AT1G71691 | 27.273 | 352 | 193 | 15 | 29 | 356 | 55 | 367 | 3.81e-16 | 79.7 |
MS.gene22125.t1 | AT2G19060 | 26.801 | 347 | 201 | 15 | 31 | 361 | 32 | 341 | 1.20e-15 | 77.8 |
MS.gene22125.t1 | AT5G41890 | 26.377 | 345 | 217 | 11 | 31 | 356 | 33 | 359 | 1.35e-15 | 77.8 |
MS.gene22125.t1 | AT5G03810 | 26.087 | 368 | 235 | 15 | 1 | 354 | 1 | 345 | 4.71e-15 | 75.9 |
MS.gene22125.t1 | AT1G58520 | 25.806 | 341 | 204 | 12 | 29 | 355 | 30 | 335 | 5.90e-15 | 75.5 |
MS.gene22125.t1 | AT1G58525 | 25.806 | 341 | 204 | 12 | 29 | 355 | 30 | 335 | 5.90e-15 | 75.5 |
MS.gene22125.t1 | AT3G14210 | 24.425 | 348 | 219 | 12 | 18 | 353 | 25 | 340 | 1.02e-14 | 75.5 |
MS.gene22125.t1 | AT5G37690 | 23.582 | 335 | 215 | 13 | 33 | 353 | 31 | 338 | 1.77e-14 | 74.3 |
MS.gene22125.t1 | AT1G54010 | 24.251 | 334 | 205 | 15 | 25 | 345 | 32 | 330 | 2.32e-14 | 74.3 |
MS.gene22125.t1 | AT5G03600 | 24.405 | 336 | 207 | 13 | 24 | 349 | 9 | 307 | 5.98e-14 | 72.4 |
MS.gene22125.t1 | AT5G03600 | 24.405 | 336 | 207 | 13 | 24 | 349 | 44 | 342 | 1.17e-13 | 72.0 |
MS.gene22125.t1 | AT1G29660 | 26.426 | 333 | 209 | 16 | 31 | 351 | 34 | 342 | 1.36e-13 | 71.6 |
MS.gene22125.t1 | AT1G33811 | 23.656 | 372 | 238 | 17 | 1 | 351 | 4 | 350 | 1.71e-13 | 71.6 |
MS.gene22125.t1 | AT1G54030 | 23.171 | 328 | 208 | 12 | 28 | 349 | 51 | 340 | 5.27e-13 | 70.1 |
MS.gene22125.t1 | AT2G36325 | 24.405 | 336 | 211 | 11 | 30 | 354 | 48 | 351 | 5.32e-13 | 70.1 |
MS.gene22125.t1 | AT1G71691 | 27.839 | 273 | 141 | 11 | 29 | 277 | 55 | 295 | 9.69e-13 | 68.6 |
MS.gene22125.t1 | AT3G43550 | 27.240 | 279 | 167 | 11 | 29 | 293 | 30 | 286 | 3.19e-11 | 63.9 |
MS.gene22125.t1 | AT1G53970 | 51.515 | 66 | 29 | 1 | 29 | 91 | 20 | 85 | 3.73e-11 | 59.7 |
MS.gene22125.t1 | AT1G53970 | 51.515 | 66 | 29 | 1 | 29 | 91 | 20 | 85 | 3.73e-11 | 59.7 |
Find 73 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGAAAGGAGCAGGTTTA+AGG | 0.171469 | 3.4:-42880055 | None:intergenic |
AAAGAGGATTATGATGAATT+TGG | 0.194125 | 3.4:+42879567 | MS.gene22125:CDS |
CATCATAATCCTCTTTCTTC+TGG | 0.251095 | 3.4:-42879560 | None:intergenic |
CATACCACCGTGACGCTAAT+TGG | 0.297782 | 3.4:+42879901 | MS.gene22125:CDS |
TACGAAGCCATCTTTAACTT+TGG | 0.316279 | 3.4:+42878604 | MS.gene22125:CDS |
CAAACAATCATTATTTATAG+TGG | 0.326230 | 3.4:+42879210 | MS.gene22125:CDS |
TTTAGTATTACCTTTGCATA+TGG | 0.350608 | 3.4:+42878544 | MS.gene22125:CDS |
TGCTTTCGGCAGAACATCTA+TGG | 0.352248 | 3.4:+42878654 | MS.gene22125:CDS |
AAAGCATGTTGTGGAGGAAT+TGG | 0.363705 | 3.4:+42879876 | MS.gene22125:CDS |
TCCCTTCTTTGTATCACCTT+GGG | 0.363775 | 3.4:-42878924 | None:intergenic |
CGTAATTGATTCAACTATCA+AGG | 0.368396 | 3.4:-42879302 | None:intergenic |
AAAGAGAATGAAAATCTTCA+TGG | 0.368824 | 3.4:-42878524 | None:intergenic |
CTTGAAAGGAGCAGGTTTAA+GGG | 0.370952 | 3.4:-42880054 | None:intergenic |
AGGACCTTCAATTAAACCTT+TGG | 0.383976 | 3.4:-42880018 | None:intergenic |
TTTCTGTCGTAATGTCTCTA+TGG | 0.389347 | 3.4:-42879646 | None:intergenic |
CTCCCTTCTTTGTATCACCT+TGG | 0.391599 | 3.4:-42878925 | None:intergenic |
ATGGATAAAAGAAGTCCTTA+TGG | 0.404744 | 3.4:+42878673 | MS.gene22125:CDS |
TTATTTATAGTGGGAGAGAT+TGG | 0.406970 | 3.4:+42879220 | MS.gene22125:CDS |
TATGAAGCACCACAACAATA+TGG | 0.415657 | 3.4:+42879723 | MS.gene22125:CDS |
TTGAAATACGTTGAACCATA+AGG | 0.431464 | 3.4:-42878688 | None:intergenic |
TAGACTATCTTGAAAGGAGC+AGG | 0.441952 | 3.4:-42880062 | None:intergenic |
GCAGTTGAGCTAGTGGTTCC+AGG | 0.445047 | 3.4:+42879489 | MS.gene22125:CDS |
CGACTCATCATAGATTTCAT+AGG | 0.447348 | 3.4:+42878739 | MS.gene22125:CDS |
CATCCCATTGGAAAGTTACC+TGG | 0.451479 | 3.4:-42879507 | None:intergenic |
TATCAGGCATTAATTGAAGA+AGG | 0.457017 | 3.4:+42879465 | MS.gene22125:intron |
ATAGCCAAAGGTTTAATTGA+AGG | 0.457396 | 3.4:+42880014 | MS.gene22125:CDS |
TGTAGGCTTTACTTCTGATA+AGG | 0.458739 | 3.4:+42879842 | MS.gene22125:intron |
TGGTGCTTCATATAAACGTT+TGG | 0.458875 | 3.4:-42879712 | None:intergenic |
TATTTGCTTATATGCTGCTT+CGG | 0.461985 | 3.4:-42879994 | None:intergenic |
GACACGGGAAACGCTGCTTT+CGG | 0.463262 | 3.4:+42878640 | MS.gene22125:CDS |
TTAAATGTAGCTGAGGCATA+CGG | 0.480816 | 3.4:+42878863 | MS.gene22125:intron |
TTATTGTGTAAAAGCAAAGA+AGG | 0.488816 | 3.4:+42879076 | MS.gene22125:CDS |
ACGTATTTCAAACATCCAAC+GGG | 0.490382 | 3.4:+42878700 | MS.gene22125:CDS |
CGTTGAGTGTGCAATTTGAC+TGG | 0.498847 | 3.4:+42879035 | MS.gene22125:CDS |
AAACAATCATTATTTATAGT+GGG | 0.503187 | 3.4:+42879211 | MS.gene22125:CDS |
CAATTAGCGTCACGGTGGTA+TGG | 0.513008 | 3.4:-42879900 | None:intergenic |
AGAGTCACCAAAGTTAAAGA+TGG | 0.513197 | 3.4:-42878611 | None:intergenic |
TTTATAGTGGGAGAGATTGG+TGG | 0.518109 | 3.4:+42879223 | MS.gene22125:CDS |
AAAGGAGCAGGTTTAAGGGA+TGG | 0.527635 | 3.4:-42880050 | None:intergenic |
GTTCCAGGTAACTTTCCAAT+GGG | 0.527784 | 3.4:+42879504 | MS.gene22125:CDS |
TTGTTGACATTTAAAGAGGC+CGG | 0.532940 | 3.4:-42878899 | None:intergenic |
AACCCAAGGTGATACAAAGA+AGG | 0.534379 | 3.4:+42878922 | MS.gene22125:CDS |
AACGTATTTCAAACATCCAA+CGG | 0.542080 | 3.4:+42878699 | MS.gene22125:CDS |
AAAGATTAGCCAGAAGAAAG+AGG | 0.542962 | 3.4:+42879551 | MS.gene22125:CDS |
AAGATGGCTTCGTATGGTAG+AGG | 0.549261 | 3.4:-42878595 | None:intergenic |
GCTAATTGGTGTGGAATGGC+TGG | 0.549385 | 3.4:+42879915 | MS.gene22125:CDS |
GGTTCCAGGTAACTTTCCAA+TGG | 0.550612 | 3.4:+42879503 | MS.gene22125:CDS |
ATGTCAACATTGCATCCCAT+TGG | 0.563361 | 3.4:-42879519 | None:intergenic |
TTAAGGGATGGATTTGCAGA+AGG | 0.566452 | 3.4:-42880038 | None:intergenic |
CCATCTGACATGCGTCCCGT+TGG | 0.567012 | 3.4:-42878715 | None:intergenic |
TAAATGTAGCTGAGGCATAC+GGG | 0.568105 | 3.4:+42878864 | MS.gene22125:intron |
CCAACGGGACGCATGTCAGA+TGG | 0.570122 | 3.4:+42878715 | MS.gene22125:CDS |
GTAATTGATTCAACTATCAA+GGG | 0.575388 | 3.4:-42879301 | None:intergenic |
TGAGATATAACATACATTGG+TGG | 0.578047 | 3.4:-42879329 | None:intergenic |
CACCGTGACGCTAATTGGTG+TGG | 0.579361 | 3.4:+42879906 | MS.gene22125:CDS |
CAATTCTAGACTATCTTGAA+AGG | 0.579606 | 3.4:-42880068 | None:intergenic |
AGAAGGTGCAGTTGAGCTAG+TGG | 0.586681 | 3.4:+42879482 | MS.gene22125:CDS |
CTTTACACACCATATTGTTG+TGG | 0.589049 | 3.4:-42879732 | None:intergenic |
CTCAACGAGTTATTTGTCGC+GGG | 0.589753 | 3.4:-42879019 | None:intergenic |
AAGTTAAAGATGGCTTCGTA+TGG | 0.591022 | 3.4:-42878601 | None:intergenic |
AAATATTATTATGATCATAG+TGG | 0.607839 | 3.4:+42878986 | MS.gene22125:CDS |
TTAAATGTCAACAAAACCCA+AGG | 0.608608 | 3.4:+42878908 | MS.gene22125:CDS |
TGGTGACTCTACAAGTGACA+CGG | 0.631100 | 3.4:+42878624 | MS.gene22125:CDS |
TGACGCTAATTGGTGTGGAA+TGG | 0.634399 | 3.4:+42879911 | MS.gene22125:CDS |
AAATATACTATCTTAGCTTG+AGG | 0.634484 | 3.4:-42879672 | None:intergenic |
GCATATAAGCAAATAGCCAA+AGG | 0.635574 | 3.4:+42880002 | MS.gene22125:CDS |
TATGCTGCTTCGGTTAAGTG+AGG | 0.639327 | 3.4:-42879984 | None:intergenic |
ACCCAAGGTGATACAAAGAA+GGG | 0.642631 | 3.4:+42878923 | MS.gene22125:CDS |
TTCCACACCAATTAGCGTCA+CGG | 0.646318 | 3.4:-42879908 | None:intergenic |
TTATTATGATCATAGTGGAG+TGG | 0.656693 | 3.4:+42878991 | MS.gene22125:CDS |
ACTCAACGAGTTATTTGTCG+CGG | 0.663418 | 3.4:-42879020 | None:intergenic |
GGTGACTCTACAAGTGACAC+GGG | 0.677598 | 3.4:+42878625 | MS.gene22125:CDS |
CACACCAATTAGCGTCACGG+TGG | 0.757662 | 3.4:-42879905 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTTAATTTTTCTTATC+AGG | + | chr3.4:42879449-42879468 | MS.gene22125:intron | 10.0% |
!! | AAACAATCATTATTTATAGT+GGG | + | chr3.4:42879211-42879230 | MS.gene22125:CDS | 15.0% |
!! | AAATATTATTATGATCATAG+TGG | + | chr3.4:42878986-42879005 | MS.gene22125:CDS | 15.0% |
!! | ATATAATCTATAACTTAAAG+AGG | - | chr3.4:42879395-42879414 | None:intergenic | 15.0% |
!!! | TCAAAACTAATAAATTTTGA+TGG | + | chr3.4:42879960-42879979 | MS.gene22125:CDS | 15.0% |
!!! | TCAAAATTTATTAGTTTTGA+AGG | - | chr3.4:42879960-42879979 | None:intergenic | 15.0% |
!! | AATAAATTGTAAGCTTAACA+AGG | - | chr3.4:42879772-42879791 | None:intergenic | 20.0% |
!! | CAAACAATCATTATTTATAG+TGG | + | chr3.4:42879210-42879229 | MS.gene22125:CDS | 20.0% |
!! | TATTATTTGTGTCAAATTCA+TGG | + | chr3.4:42879120-42879139 | MS.gene22125:intron | 20.0% |
!!! | TTTTAAAAATCCATATGCAA+AGG | - | chr3.4:42878557-42878576 | None:intergenic | 20.0% |
! | AAAGAGGATTATGATGAATT+TGG | + | chr3.4:42879567-42879586 | MS.gene22125:CDS | 25.0% |
! | TTATTGTGTAAAAGCAAAGA+AGG | + | chr3.4:42879076-42879095 | MS.gene22125:CDS | 25.0% |
! | TTTAGTATTACCTTTGCATA+TGG | + | chr3.4:42878544-42878563 | MS.gene22125:CDS | 25.0% |
! | TTTATGTGCATTAATGATGT+AGG | + | chr3.4:42879825-42879844 | MS.gene22125:intron | 25.0% |
!! | AAATATACTATCTTAGCTTG+AGG | - | chr3.4:42879675-42879694 | None:intergenic | 25.0% |
!! | ATCTGAGATATAACATACAT+TGG | - | chr3.4:42879335-42879354 | None:intergenic | 25.0% |
!! | GTAATTGATTCAACTATCAA+GGG | - | chr3.4:42879304-42879323 | None:intergenic | 25.0% |
!!! | TCTTTGCTTTTACACAATAA+GGG | - | chr3.4:42879076-42879095 | None:intergenic | 25.0% |
!!! | TGTTATTTTAAATGTAGCTG+AGG | + | chr3.4:42878856-42878875 | MS.gene22125:intron | 25.0% |
!!! | TTCTTTGCTTTTACACAATA+AGG | - | chr3.4:42879077-42879096 | None:intergenic | 25.0% |
AACGTATTTCAAACATCCAA+CGG | + | chr3.4:42878699-42878718 | MS.gene22125:CDS | 30.0% | |
ATAGCCAAAGGTTTAATTGA+AGG | + | chr3.4:42880014-42880033 | MS.gene22125:CDS | 30.0% | |
ATGGATAAAAGAAGTCCTTA+TGG | + | chr3.4:42878673-42878692 | MS.gene22125:CDS | 30.0% | |
CAAATAATATGCAAGAAGGT+AGG | - | chr3.4:42879109-42879128 | None:intergenic | 30.0% | |
GACACAAATAATATGCAAGA+AGG | - | chr3.4:42879113-42879132 | None:intergenic | 30.0% | |
TATCAGGCATTAATTGAAGA+AGG | + | chr3.4:42879465-42879484 | MS.gene22125:intron | 30.0% | |
TGAGATATAACATACATTGG+TGG | - | chr3.4:42879332-42879351 | None:intergenic | 30.0% | |
TTAAATGTCAACAAAACCCA+AGG | + | chr3.4:42878908-42878927 | MS.gene22125:CDS | 30.0% | |
TTAATGCACATAAACTAGTG+AGG | - | chr3.4:42879819-42879838 | None:intergenic | 30.0% | |
TTGAAATACGTTGAACCATA+AGG | - | chr3.4:42878691-42878710 | None:intergenic | 30.0% | |
! | AAGGGAGTTAATTTTGCTTT+TGG | + | chr3.4:42878941-42878960 | MS.gene22125:CDS | 30.0% |
! | CGTAATTGATTCAACTATCA+AGG | - | chr3.4:42879305-42879324 | None:intergenic | 30.0% |
! | TATTTGCTTATATGCTGCTT+CGG | - | chr3.4:42879997-42880016 | None:intergenic | 30.0% |
! | TTATTATGATCATAGTGGAG+TGG | + | chr3.4:42878991-42879010 | MS.gene22125:CDS | 30.0% |
! | TTATTTATAGTGGGAGAGAT+TGG | + | chr3.4:42879220-42879239 | MS.gene22125:CDS | 30.0% |
!!! | GGTTTTGTTGACATTTAAAG+AGG | - | chr3.4:42878906-42878925 | None:intergenic | 30.0% |
AAGTTAAAGATGGCTTCGTA+TGG | - | chr3.4:42878604-42878623 | None:intergenic | 35.0% | |
ACGTATTTCAAACATCCAAC+GGG | + | chr3.4:42878700-42878719 | MS.gene22125:CDS | 35.0% | |
AGAGTCACCAAAGTTAAAGA+TGG | - | chr3.4:42878614-42878633 | None:intergenic | 35.0% | |
AGGACCTTCAATTAAACCTT+TGG | - | chr3.4:42880021-42880040 | None:intergenic | 35.0% | |
CATCATAATCCTCTTTCTTC+TGG | - | chr3.4:42879563-42879582 | None:intergenic | 35.0% | |
CGACTCATCATAGATTTCAT+AGG | + | chr3.4:42878739-42878758 | MS.gene22125:CDS | 35.0% | |
CTTTACACACCATATTGTTG+TGG | - | chr3.4:42879735-42879754 | None:intergenic | 35.0% | |
GCATATAAGCAAATAGCCAA+AGG | + | chr3.4:42880002-42880021 | MS.gene22125:CDS | 35.0% | |
TGGTGCTTCATATAAACGTT+TGG | - | chr3.4:42879715-42879734 | None:intergenic | 35.0% | |
TGTAGGCTTTACTTCTGATA+AGG | + | chr3.4:42879842-42879861 | MS.gene22125:intron | 35.0% | |
TTAAATGTAGCTGAGGCATA+CGG | + | chr3.4:42878863-42878882 | MS.gene22125:intron | 35.0% | |
TTGTTGACATTTAAAGAGGC+CGG | - | chr3.4:42878902-42878921 | None:intergenic | 35.0% | |
TTTCTGTCGTAATGTCTCTA+TGG | - | chr3.4:42879649-42879668 | None:intergenic | 35.0% | |
! | AAAGATTAGCCAGAAGAAAG+AGG | + | chr3.4:42879551-42879570 | MS.gene22125:CDS | 35.0% |
! | TACGAAGCCATCTTTAACTT+TGG | + | chr3.4:42878604-42878623 | MS.gene22125:CDS | 35.0% |
! | TATGAAGCACCACAACAATA+TGG | + | chr3.4:42879723-42879742 | MS.gene22125:CDS | 35.0% |
!! | ATTTTGAAAGCATGTTGTGG+AGG | + | chr3.4:42879870-42879889 | MS.gene22125:CDS | 35.0% |
!! | GAGATTTTGAAAGCATGTTG+TGG | + | chr3.4:42879867-42879886 | MS.gene22125:CDS | 35.0% |
!! | GGAGTTAATTTTGCTTTTGG+AGG | + | chr3.4:42878944-42878963 | MS.gene22125:CDS | 35.0% |
AAAGCATGTTGTGGAGGAAT+TGG | + | chr3.4:42879876-42879895 | MS.gene22125:CDS | 40.0% | |
AACCCAAGGTGATACAAAGA+AGG | + | chr3.4:42878922-42878941 | MS.gene22125:CDS | 40.0% | |
ACCCAAGGTGATACAAAGAA+GGG | + | chr3.4:42878923-42878942 | MS.gene22125:CDS | 40.0% | |
ACTCAACGAGTTATTTGTCG+CGG | - | chr3.4:42879023-42879042 | None:intergenic | 40.0% | |
ATGTCAACATTGCATCCCAT+TGG | - | chr3.4:42879522-42879541 | None:intergenic | 40.0% | |
CTTGAAAGGAGCAGGTTTAA+GGG | - | chr3.4:42880057-42880076 | None:intergenic | 40.0% | |
GCACATAAACTAGTGAGGAT+GGG | - | chr3.4:42879814-42879833 | None:intergenic | 40.0% | |
GTTCCAGGTAACTTTCCAAT+GGG | + | chr3.4:42879504-42879523 | MS.gene22125:CDS | 40.0% | |
TAAATGTAGCTGAGGCATAC+GGG | + | chr3.4:42878864-42878883 | MS.gene22125:intron | 40.0% | |
TAGACTATCTTGAAAGGAGC+AGG | - | chr3.4:42880065-42880084 | None:intergenic | 40.0% | |
TCCCTTCTTTGTATCACCTT+GGG | - | chr3.4:42878927-42878946 | None:intergenic | 40.0% | |
TCTTGAAAGGAGCAGGTTTA+AGG | - | chr3.4:42880058-42880077 | None:intergenic | 40.0% | |
TGCACATAAACTAGTGAGGA+TGG | - | chr3.4:42879815-42879834 | None:intergenic | 40.0% | |
TTTAAAGAGGCCGGCAAAAA+TGG | - | chr3.4:42878893-42878912 | None:intergenic | 40.0% | |
! | TTAAGGGATGGATTTGCAGA+AGG | - | chr3.4:42880041-42880060 | None:intergenic | 40.0% |
! | TTTATAGTGGGAGAGATTGG+TGG | + | chr3.4:42879223-42879242 | MS.gene22125:CDS | 40.0% |
AAAGGAGCAGGTTTAAGGGA+TGG | - | chr3.4:42880053-42880072 | None:intergenic | 45.0% | |
AAGATGGCTTCGTATGGTAG+AGG | - | chr3.4:42878598-42878617 | None:intergenic | 45.0% | |
CATCCCATTGGAAAGTTACC+TGG | - | chr3.4:42879510-42879529 | None:intergenic | 45.0% | |
CGTTGAGTGTGCAATTTGAC+TGG | + | chr3.4:42879035-42879054 | MS.gene22125:CDS | 45.0% | |
CTCAACGAGTTATTTGTCGC+GGG | - | chr3.4:42879022-42879041 | None:intergenic | 45.0% | |
CTCCCTTCTTTGTATCACCT+TGG | - | chr3.4:42878928-42878947 | None:intergenic | 45.0% | |
GGTTCCAGGTAACTTTCCAA+TGG | + | chr3.4:42879503-42879522 | MS.gene22125:CDS | 45.0% | |
TGACGCTAATTGGTGTGGAA+TGG | + | chr3.4:42879911-42879930 | MS.gene22125:CDS | 45.0% | |
TGCTTTCGGCAGAACATCTA+TGG | + | chr3.4:42878654-42878673 | MS.gene22125:CDS | 45.0% | |
TGGTGACTCTACAAGTGACA+CGG | + | chr3.4:42878624-42878643 | MS.gene22125:CDS | 45.0% | |
TTCCACACCAATTAGCGTCA+CGG | - | chr3.4:42879911-42879930 | None:intergenic | 45.0% | |
! | TATGCTGCTTCGGTTAAGTG+AGG | - | chr3.4:42879987-42880006 | None:intergenic | 45.0% |
!!! | ATACGGGTTGCCATTTTTGC+CGG | + | chr3.4:42878880-42878899 | MS.gene22125:CDS | 45.0% |
CAATTAGCGTCACGGTGGTA+TGG | - | chr3.4:42879903-42879922 | None:intergenic | 50.0% | |
CATACCACCGTGACGCTAAT+TGG | + | chr3.4:42879901-42879920 | MS.gene22125:CDS | 50.0% | |
GCTAATTGGTGTGGAATGGC+TGG | + | chr3.4:42879915-42879934 | MS.gene22125:CDS | 50.0% | |
GGTGACTCTACAAGTGACAC+GGG | + | chr3.4:42878625-42878644 | MS.gene22125:CDS | 50.0% | |
! | AGAAGGTGCAGTTGAGCTAG+TGG | + | chr3.4:42879482-42879501 | MS.gene22125:CDS | 50.0% |
CACACCAATTAGCGTCACGG+TGG | - | chr3.4:42879908-42879927 | None:intergenic | 55.0% | |
CACCGTGACGCTAATTGGTG+TGG | + | chr3.4:42879906-42879925 | MS.gene22125:CDS | 55.0% | |
GCAGTTGAGCTAGTGGTTCC+AGG | + | chr3.4:42879489-42879508 | MS.gene22125:CDS | 55.0% | |
! | GACACGGGAAACGCTGCTTT+CGG | + | chr3.4:42878640-42878659 | MS.gene22125:CDS | 55.0% |
CCAACGGGACGCATGTCAGA+TGG | + | chr3.4:42878715-42878734 | MS.gene22125:CDS | 60.0% | |
CCATCTGACATGCGTCCCGT+TGG | - | chr3.4:42878718-42878737 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 42878526 | 42880085 | 42878526 | ID=MS.gene22125 |
chr3.4 | mRNA | 42878526 | 42880085 | 42878526 | ID=MS.gene22125.t1;Parent=MS.gene22125 |
chr3.4 | exon | 42878526 | 42878760 | 42878526 | ID=MS.gene22125.t1.exon1;Parent=MS.gene22125.t1 |
chr3.4 | CDS | 42878526 | 42878760 | 42878526 | ID=cds.MS.gene22125.t1;Parent=MS.gene22125.t1 |
chr3.4 | exon | 42878873 | 42879097 | 42878873 | ID=MS.gene22125.t1.exon2;Parent=MS.gene22125.t1 |
chr3.4 | CDS | 42878873 | 42879097 | 42878873 | ID=cds.MS.gene22125.t1;Parent=MS.gene22125.t1 |
chr3.4 | exon | 42879194 | 42879336 | 42879194 | ID=MS.gene22125.t1.exon3;Parent=MS.gene22125.t1 |
chr3.4 | CDS | 42879194 | 42879336 | 42879194 | ID=cds.MS.gene22125.t1;Parent=MS.gene22125.t1 |
chr3.4 | exon | 42879471 | 42879744 | 42879471 | ID=MS.gene22125.t1.exon4;Parent=MS.gene22125.t1 |
chr3.4 | CDS | 42879471 | 42879744 | 42879471 | ID=cds.MS.gene22125.t1;Parent=MS.gene22125.t1 |
chr3.4 | exon | 42879847 | 42880085 | 42879847 | ID=MS.gene22125.t1.exon5;Parent=MS.gene22125.t1 |
chr3.4 | CDS | 42879847 | 42880085 | 42879847 | ID=cds.MS.gene22125.t1;Parent=MS.gene22125.t1 |
Gene Sequence |
Protein sequence |