AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22603


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22603.t1 MTR_5g011000 96.354 1536 39 1 1 1536 1 1519 0.0 3063
MS.gene22603.t1 MTR_8g038990 27.841 528 327 14 821 1325 769 1265 1.04e-42 172
MS.gene22603.t1 MTR_8g038990 26.275 647 390 20 50 656 54 653 1.80e-36 152
MS.gene22603.t1 MTR_5g023020 26.949 590 339 22 340 890 350 886 3.89e-39 160
MS.gene22603.t1 MTR_4g061700 25.621 644 370 21 342 930 354 943 1.38e-36 152
MS.gene22603.t1 MTR_4g061800 25.963 597 345 18 342 890 355 902 1.42e-35 148
MS.gene22603.t1 MTR_4g086290 24.164 658 349 20 340 890 409 1023 1.22e-26 119
MS.gene22603.t1 MTR_4g086290 24.387 652 355 19 340 890 409 1023 3.61e-26 117
MS.gene22603.t1 MTR_8g066100 26.577 222 135 6 297 511 23 223 1.65e-15 78.6
MS.gene22603.t1 MTR_3g101770 45.122 82 42 1 1388 1466 120 201 8.85e-14 72.8
MS.gene22603.t1 MTR_3g102270 41.379 87 48 2 1379 1462 91 177 2.38e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22603.t1 AT1G63020 51.228 1466 653 21 47 1493 28 1450 0.0 1402
MS.gene22603.t1 AT1G63020 51.228 1466 653 21 47 1493 28 1450 0.0 1402
MS.gene22603.t1 AT1G63020 50.682 1466 647 22 47 1493 28 1436 0.0 1374
MS.gene22603.t1 AT1G63020 53.713 1212 512 18 47 1245 28 1203 0.0 1235
MS.gene22603.t1 AT1G63020 53.037 1169 511 13 336 1493 1 1142 0.0 1169
MS.gene22603.t1 AT2G40030 27.837 1031 614 34 336 1326 311 1251 6.09e-86 311
MS.gene22603.t1 AT2G40030 27.837 1031 614 34 336 1326 311 1251 2.37e-85 310
MS.gene22603.t1 AT2G40030 39.080 87 50 2 1379 1462 1741 1827 6.08e-11 68.2
MS.gene22603.t1 AT5G60040 24.266 919 521 32 66 890 66 903 5.05e-42 169
MS.gene22603.t1 AT4G35800 27.288 590 337 21 340 890 351 887 7.23e-42 169
MS.gene22603.t1 AT4G35800 27.288 590 337 21 340 890 351 887 7.23e-42 169
MS.gene22603.t1 AT5G60040 23.906 937 519 33 66 890 66 920 5.62e-39 159
MS.gene22603.t1 AT3G57660 26.990 289 156 7 340 577 428 712 2.48e-16 85.9
MS.gene22603.t1 AT3G57660 26.990 289 156 7 340 577 441 725 2.51e-16 85.9
MS.gene22603.t1 AT1G45230 48.148 81 39 2 1389 1466 116 196 7.09e-13 70.1
MS.gene22603.t1 AT3G46630 34.906 106 64 3 1360 1462 79 182 1.71e-11 65.9
MS.gene22603.t1 AT1G45230 46.341 82 41 2 1388 1466 115 196 2.73e-11 65.5

Find 304 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTCCTTGCTATGTTTA+AGG 0.068251 5.1:+4594189 MS.gene22603:CDS
TTTAAATAAGAAAAGAAATT+TGG 0.108907 5.1:+4591480 MS.gene22603:CDS
TTCCACTGCTTAGGCTCTTT+TGG 0.149039 5.1:-4599704 None:intergenic
GAAGTCCCTCATCGACTTTC+AGG 0.160626 5.1:+4592530 MS.gene22603:CDS
GACCTTGAGCTTAGTGAAAT+TGG 0.184871 5.1:+4593014 MS.gene22603:CDS
TCGATTATTTCAGGTCATTT+TGG 0.188941 5.1:+4590638 MS.gene22603:intron
GCAAGAAATTGGTTGATTTC+AGG 0.189595 5.1:+4592692 MS.gene22603:CDS
GGACTTCCAAATTCTTCTTA+TGG 0.194957 5.1:+4590491 MS.gene22603:CDS
GAGGATTACCTGCCGATTAT+TGG 0.215609 5.1:+4591506 MS.gene22603:CDS
ATATCTTGTTCCGAGGCTTC+TGG 0.216542 5.1:+4593734 MS.gene22603:CDS
ACTAGAAGTTAAGAATTATT+TGG 0.227005 5.1:+4594879 MS.gene22603:CDS
TTTCCTTGTCTAAATGAAAA+TGG 0.230009 5.1:-4594993 None:intergenic
TTGGACAGGCAACTGATTAA+TGG 0.248893 5.1:+4593443 MS.gene22603:CDS
GGTTGGTCTCAGTTGCTTCT+TGG 0.249095 5.1:+4592481 MS.gene22603:CDS
TCATACCGCAAATGCATTCT+TGG 0.268520 5.1:+4601572 MS.gene22603:CDS
GTGCACCCATAAGAAGAATT+TGG 0.272747 5.1:-4590497 None:intergenic
GACCAGGGCTTGCAAGAAAT+TGG 0.277678 5.1:+4592681 MS.gene22603:CDS
TTAAATAAGAAAAGAAATTT+GGG 0.287779 5.1:+4591481 MS.gene22603:CDS
TCAAATTGCAGAAGCTTTGC+AGG 0.290475 5.1:+4593046 MS.gene22603:CDS
AAATCTTATAATGGTTCTTC+TGG 0.291454 5.1:+4597885 MS.gene22603:CDS
GACTTCCAAATTCTTCTTAT+GGG 0.295172 5.1:+4590492 MS.gene22603:CDS
ACAGCAATATTTGCAACCTT+TGG 0.303749 5.1:-4591241 None:intergenic
GCAATCTCTGCCATGAAGTA+TGG 0.304427 5.1:-4590692 None:intergenic
TATGGATGTAAAATGGTAAA+AGG 0.307882 5.1:-4590674 None:intergenic
CGATGATTGCTCTCACAGTT+AGG 0.309258 5.1:+4593282 MS.gene22603:CDS
GGGACAAAGTGTTGATAAAT+AGG 0.313397 5.1:+4593237 MS.gene22603:CDS
AGTATGTCAATCGGCAAAAT+AGG 0.314657 5.1:+4593075 MS.gene22603:CDS
CTTCTGCAAACAGCTATAAA+AGG 0.318730 5.1:+4597313 MS.gene22603:CDS
TTCCCGACCATCTATTCCTT+TGG 0.324024 5.1:-4601631 None:intergenic
CCTTGGACTGCAACATTCTC+TGG 0.325028 5.1:+4594258 MS.gene22603:CDS
TTATAAGATTTCGTTACTTT+TGG 0.331519 5.1:-4597873 None:intergenic
TTAAATACTTATAGGATAAT+AGG 0.331600 5.1:+4592659 MS.gene22603:intron
TTTCATCCAATGATTTCTTC+AGG 0.331811 5.1:+4591422 MS.gene22603:CDS
GTTTATTCCAAGCATGGATT+TGG 0.335605 5.1:+4592460 MS.gene22603:CDS
CACCATTTCTGCTCAGCCTT+TGG 0.336965 5.1:+4598035 MS.gene22603:CDS
GCTTAATGAGCTGGTTGCTT+TGG 0.339186 5.1:+4593424 MS.gene22603:CDS
GGATGAAACTCTGAATTTCA+TGG 0.343280 5.1:-4591407 None:intergenic
ATTGTTTGCCACTCCAAAAC+GGG 0.344019 5.1:-4593634 None:intergenic
CAGATAAATGTTCGCAGAAA+TGG 0.344254 5.1:+4593143 MS.gene22603:CDS
AGGATTACCTGCCGATTATT+GGG 0.345739 5.1:+4591507 MS.gene22603:CDS
GCAATGACAATGGTACATTC+TGG 0.347220 5.1:+4597940 MS.gene22603:CDS
TGAGTTAAGTTCTCGTGTTT+TGG 0.354801 5.1:+4592726 MS.gene22603:CDS
AAAATTGGTAAACAAAGAAA+TGG 0.355562 5.1:+4594841 MS.gene22603:CDS
CATAAAAGCGATAAAGTTTG+AGG 0.357208 5.1:+4590092 MS.gene22603:CDS
TTGTGATTTCAACCAGTTAT+TGG 0.359411 5.1:+4593979 MS.gene22603:CDS
TCATCTGCAACTTCTGATAC+TGG 0.362171 5.1:+4598192 MS.gene22603:CDS
TTGGTCCATCTGGTTAAAAC+TGG 0.364486 5.1:-4599600 None:intergenic
GATGCTTCAAGTAGACTAAT+AGG 0.367103 5.1:-4594733 None:intergenic
ACAAGTCACTTGTTCTGATC+TGG 0.368529 5.1:+4590469 MS.gene22603:CDS
TGGACAGGCAACTGATTAAT+GGG 0.370621 5.1:+4593444 MS.gene22603:CDS
TATCTTGTTCCGAGGCTTCT+GGG 0.372030 5.1:+4593735 MS.gene22603:CDS
TGGATGAAAGACGTCGTTCT+TGG 0.373338 5.1:+4592945 MS.gene22603:CDS
TTCAGCTAGTGGAGAGTTTG+TGG 0.382492 5.1:+4598260 MS.gene22603:CDS
CAATCTAGATGCATTGGCTT+GGG 0.387250 5.1:+4598545 MS.gene22603:CDS
CATGAAGTATGGATGTAAAA+TGG 0.387461 5.1:-4590681 None:intergenic
TCAAGAAGGTTGACATTCTC+TGG 0.390421 5.1:+4597841 MS.gene22603:CDS
CAGAAATGGTGAATATTATC+AGG 0.392369 5.1:-4598023 None:intergenic
TTGGGGAAACTGTCTGCCCA+TGG 0.393744 5.1:+4598563 MS.gene22603:CDS
AACTGTCTGCCCATGGGGAC+AGG 0.394184 5.1:+4598570 MS.gene22603:CDS
CAGCAATATTTGCAACCTTT+GGG 0.396290 5.1:-4591240 None:intergenic
CAAGAAATTGGTTGATTTCA+GGG 0.399414 5.1:+4592693 MS.gene22603:CDS
CCCCGTGAACTTTCATGTGC+TGG 0.401216 5.1:+4594301 MS.gene22603:CDS
TATTAATCTCTTGGTCCATC+TGG 0.402596 5.1:-4599610 None:intergenic
TTTGATGGTGACTGCCTTCA+CGG 0.405921 5.1:+4593368 MS.gene22603:CDS
GTCAAGTCAAATACAGTCCT+TGG 0.406221 5.1:+4594965 MS.gene22603:CDS
TTCCAAAGGCTGAGCAGAAA+TGG 0.408120 5.1:-4598037 None:intergenic
GAAAATGTTCCACAAGACTT+TGG 0.410243 5.1:-4593787 None:intergenic
CTCTGGACCACAAGACATAA+AGG 0.411401 5.1:+4600261 MS.gene22603:CDS
AGTAATGATCTACCAATAAC+TGG 0.412687 5.1:-4593991 None:intergenic
CTCTAAGAATTCTGTACTAC+TGG 0.412788 5.1:+4597261 MS.gene22603:CDS
TGGGGAAACTGTCTGCCCAT+GGG 0.413350 5.1:+4598564 MS.gene22603:CDS
GAATAATGCCGTTGATTGAC+TGG 0.413930 5.1:+4597988 MS.gene22603:CDS
AGTGACAACGCAGACCTTCC+TGG 0.414558 5.1:+4594487 MS.gene22603:CDS
CTTCAAGTAATACCCCGTTT+TGG 0.414732 5.1:+4593621 MS.gene22603:CDS
ATGGTCGGGAAATGGTGATA+TGG 0.416767 5.1:+4601643 MS.gene22603:CDS
ATCAAAATAGGGAAATGGTA+TGG 0.420088 5.1:+4591372 MS.gene22603:intron
ATAGATACTACAGAAGATAT+TGG 0.420170 5.1:-4593311 None:intergenic
CAATCTCGCAAATATTCATC+TGG 0.420397 5.1:+4599638 MS.gene22603:CDS
GGAACAGTGAGAAACTTATA+TGG 0.423338 5.1:+4594565 MS.gene22603:CDS
GATTATTGGGACTTTATCCT+TGG 0.424725 5.1:+4591520 MS.gene22603:CDS
AAAGTAACGAAATCTTATAA+TGG 0.425151 5.1:+4597876 MS.gene22603:CDS
TCGACAAGAATTACGTGTTA+AGG 0.425487 5.1:+4590754 MS.gene22603:CDS
CCTCGTAGAGATGAGAAGTT+TGG 0.426581 5.1:+4600238 MS.gene22603:CDS
TGTAAAAGTATTACCTGAAC+GGG 0.427703 5.1:-4591589 None:intergenic
TCTGTCACACGATGACAATT+CGG 0.431347 5.1:-4592509 None:intergenic
ATTGAAGGGTATTAATCTCT+TGG 0.432033 5.1:-4599619 None:intergenic
CGCAGAGGTGAACAGCAGAT+TGG 0.432250 5.1:-4593338 None:intergenic
TCAGCCTTTGGAATCGATGC+AGG 0.432958 5.1:+4598047 MS.gene22603:CDS
TCAGCTAGTGGAGAGTTTGT+GGG 0.433030 5.1:+4598261 MS.gene22603:CDS
GTGCAGCAGTTAAACTATCC+TGG 0.433101 5.1:-4593496 None:intergenic
AAGGATAAAGTCCCAATAAT+CGG 0.435976 5.1:-4591518 None:intergenic
GAAAATGCTTGCAATTCGTC+TGG 0.436937 5.1:+4592915 MS.gene22603:CDS
TTCTGAAGGAGTCATATTGC+TGG 0.436964 5.1:-4595065 None:intergenic
AAGGCATAGTCAAATTTAGA+AGG 0.437146 5.1:-4593674 None:intergenic
CAAAGCTTCTGCAATTTGAC+AGG 0.437923 5.1:-4593042 None:intergenic
ATATTAACTGGCGTTCTGTC+AGG 0.443311 5.1:-4592861 None:intergenic
TTCCTTGCTATGTTTAAGGC+TGG 0.445099 5.1:+4594193 MS.gene22603:CDS
TGTGAGTGGTTGTCTATGAC+AGG 0.446262 5.1:+4593854 MS.gene22603:CDS
CAGGCAGAAAGCGCTCCGAC+TGG 0.448913 5.1:-4594673 None:intergenic
TATGCATCAAAATAGGGAAA+TGG 0.449961 5.1:+4591367 MS.gene22603:intron
TTTATCGGCCTCTTGTTGAT+GGG 0.453246 5.1:+4593216 MS.gene22603:CDS
ATGAATATTTGCGAGATTGA+AGG 0.455447 5.1:-4599634 None:intergenic
CAATGACAATGGTACATTCT+GGG 0.455481 5.1:+4597941 MS.gene22603:CDS
ATGAGCTGGTTGCTTTGGAC+AGG 0.456391 5.1:+4593429 MS.gene22603:CDS
GCAATTCGTCTGGTTTAAGA+TGG 0.462733 5.1:+4592925 MS.gene22603:CDS
AACTTGCCTTGGAAAATCTC+AGG 0.463750 5.1:-4592753 None:intergenic
AATTGTTTGCCACTCCAAAA+CGG 0.464029 5.1:-4593635 None:intergenic
GCACTTTGTGCACTGTAGCC+AGG 0.465310 5.1:-4590059 None:intergenic
GCATTTCAAGCTGCTGCACT+TGG 0.465552 5.1:-4593556 None:intergenic
AAATTTGCTTTCACTTTCCC+AGG 0.466210 5.1:+4593478 MS.gene22603:CDS
ATCCAAAGGAATAGATGGTC+GGG 0.470130 5.1:+4601629 MS.gene22603:CDS
TTTGTGGGATTAAATGCTAA+AGG 0.473356 5.1:+4598276 MS.gene22603:CDS
TGAGCAATGTAAGACTGGTT+TGG 0.473908 5.1:-4594379 None:intergenic
GCAACAAGACGCAGATGCTT+AGG 0.474004 5.1:-4598228 None:intergenic
AACCAATTTCTTGCAAGCCC+TGG 0.474313 5.1:-4592683 None:intergenic
AGTTCTCCTGAAGAAATCAT+TGG 0.475110 5.1:-4591428 None:intergenic
AAATTGGTAAACAAAGAAAT+GGG 0.475636 5.1:+4594842 MS.gene22603:CDS
CAAAGATCCAAAGGAATAGA+TGG 0.475920 5.1:+4601624 MS.gene22603:CDS
TGTCGAATAGATTTACATGC+AGG 0.477791 5.1:-4590737 None:intergenic
AAGGAAGCTAAGAAATGGTC+AGG 0.478002 5.1:+4601728 MS.gene22603:CDS
GCAGAGGTGAACAGCAGATT+GGG 0.478220 5.1:-4593337 None:intergenic
ACTTCCACATCATTATTTCC+CGG 0.478350 5.1:-4601779 None:intergenic
TGGAGTTGTGGATAATCTCC+AGG 0.480292 5.1:+4598521 MS.gene22603:CDS
CAAGTCACTTGTTCTGATCT+GGG 0.481047 5.1:+4590470 MS.gene22603:CDS
TGAGCTGCGTTTGTTAGAGA+AGG 0.483606 5.1:+4593118 MS.gene22603:CDS
TGCTGGTTGGAACAGTCAAA+AGG 0.483843 5.1:+4594318 MS.gene22603:CDS
TGAAAAGTTTATTCCAAGCA+TGG 0.484092 5.1:+4592454 MS.gene22603:CDS
ATGTTCATCCACACCTTCAC+AGG 0.485697 5.1:-4590546 None:intergenic
AGGAATAGATGGTCGGGAAA+TGG 0.488750 5.1:+4601635 MS.gene22603:CDS
TGGCTTACGAGTAGCAGAAC+AGG 0.491124 5.1:+4593955 MS.gene22603:CDS
AATCATCGAGTGTTGGTGTA+TGG 0.492737 5.1:-4593267 None:intergenic
GTGCAACATTCCATGTGCCT+TGG 0.493283 5.1:+4594241 MS.gene22603:CDS
TCTGCTGTTCACCTCTGCGT+GGG 0.494173 5.1:+4593342 MS.gene22603:CDS
GCAATCTAGATGCATTGGCT+TGG 0.495208 5.1:+4598544 MS.gene22603:CDS
AGAAAATCATGTAAATAGAA+AGG 0.495810 5.1:+4591558 MS.gene22603:CDS
ATGACAAGGAAGCTAAGAAA+TGG 0.497395 5.1:+4601723 MS.gene22603:CDS
GGACAAGTTAACAATAATGA+AGG 0.497681 5.1:+4600201 MS.gene22603:CDS
CAAAACGGGGTATTACTTGA+AGG 0.500907 5.1:-4593620 None:intergenic
TGGGCTGATTATTGTATCCA+AGG 0.501083 5.1:-4591221 None:intergenic
TGACTTGACTGCAATGCTGT+GGG 0.501511 5.1:-4594951 None:intergenic
CGCTGGACATAGTAACCCTC+AGG 0.501989 5.1:-4597917 None:intergenic
AAGTCCCTCATCGACTTTCA+GGG 0.501992 5.1:+4592531 MS.gene22603:CDS
GATGATTGCTCTCACAGTTA+GGG 0.502840 5.1:+4593283 MS.gene22603:CDS
GAGCACCAAGAATGCATTTG+CGG 0.503799 5.1:-4601577 None:intergenic
ATCACAAGATGAATCCTCTT+CGG 0.503984 5.1:-4594617 None:intergenic
AACTGCTGCACATTTGCTGT+TGG 0.505905 5.1:+4593508 MS.gene22603:CDS
TGGTCTCAGTTGCTTCTTGG+TGG 0.507317 5.1:+4592484 MS.gene22603:CDS
GTGACAACGCAGACCTTCCT+GGG 0.507371 5.1:+4594488 MS.gene22603:CDS
AATACACTTACGAAACTCAA+TGG 0.507710 5.1:-4592560 None:intergenic
ATTCCAAGCATGGATTTGGT+TGG 0.508111 5.1:+4592464 MS.gene22603:CDS
TCCAGGTGCATTTATCTCCA+AGG 0.508480 5.1:-4590447 None:intergenic
TCAAGTCAAATACAGTCCTT+GGG 0.508664 5.1:+4594966 MS.gene22603:CDS
AGAGATGAGAAGTTTGGCTC+TGG 0.509525 5.1:+4600244 MS.gene22603:CDS
GCACATTTGCTGTTGGAAGA+TGG 0.510207 5.1:+4593515 MS.gene22603:CDS
CCAGGGCAATCTAGATGCAT+TGG 0.513278 5.1:+4598539 MS.gene22603:CDS
TTGACTTGACTGCAATGCTG+TGG 0.514852 5.1:-4594952 None:intergenic
AAGAAAAGAAATTTGGGGCG+AGG 0.514854 5.1:+4591487 MS.gene22603:CDS
GCAGGAGAAGATCTCAGCCT+TGG 0.515473 5.1:+4590430 MS.gene22603:intron
GCTGGTTGGAACAGTCAAAA+GGG 0.516736 5.1:+4594319 MS.gene22603:CDS
ACTCTTGCACCAACAGATTG+TGG 0.517257 5.1:-4593398 None:intergenic
CAACGGCTGTCTGTAAACTT+AGG 0.518783 5.1:-4601509 None:intergenic
TCAGAACAAGTGACTTGTCC+AGG 0.520715 5.1:-4590464 None:intergenic
GCCAACAGTCTTTCAGCTAG+TGG 0.522257 5.1:+4598249 MS.gene22603:CDS
GAAAAGCATGCTTGCACGAA+GGG 0.523798 5.1:-4598336 None:intergenic
ATTTCACTAAGCTCAAGGTC+TGG 0.524366 5.1:-4593011 None:intergenic
GATAAGTCTGTAGATGTGTA+TGG 0.524627 5.1:+4599566 MS.gene22603:CDS
ATGTCTACTCACAGGTTGGA+TGG 0.524848 5.1:+4601483 MS.gene22603:intron
TGCAGCAGTTAAACTATCCT+GGG 0.526315 5.1:-4593495 None:intergenic
AGTCTACGGGTCAATGTCCC+AGG 0.527003 5.1:-4594505 None:intergenic
ATGTTCTAGAGTGTGGTTCA+AGG 0.527139 5.1:+4594776 MS.gene22603:CDS
AGCTGCGAAGTCTGGAGTTG+TGG 0.529515 5.1:+4598509 MS.gene22603:CDS
ACCAGCACATGAAAGTTCAC+GGG 0.530210 5.1:-4594302 None:intergenic
TGTACCATTGTCATTGCCGC+TGG 0.530768 5.1:-4597934 None:intergenic
TTCTGCCTGTGCGGTTTCTG+AGG 0.530871 5.1:+4594687 MS.gene22603:CDS
GGTTAAAACTGGTTTCTAGC+AGG 0.531854 5.1:-4599589 None:intergenic
AGCTGATAAGCATGCGTGCA+AGG 0.532192 5.1:+4594162 MS.gene22603:CDS
ATGATGGAGGAAATCTCCTA+TGG 0.533841 5.1:+4593935 MS.gene22603:CDS
AACTGTCCACCTGTCCCCAT+GGG 0.534121 5.1:-4598579 None:intergenic
GAGCTGCGTTTGTTAGAGAA+GGG 0.534843 5.1:+4593119 MS.gene22603:CDS
TGAATATTTGCGAGATTGAA+GGG 0.536189 5.1:-4599633 None:intergenic
AAACTGTCCACCTGTCCCCA+TGG 0.537607 5.1:-4598580 None:intergenic
CAGCATGAGCAATGTAAGAC+TGG 0.539126 5.1:-4594384 None:intergenic
AACCAGCACATGAAAGTTCA+CGG 0.541175 5.1:-4594303 None:intergenic
CAGCGTGCTAAATCACTCCT+TGG 0.543747 5.1:+4591204 MS.gene22603:intron
TCTTATGGGTGCACAACATG+TGG 0.545300 5.1:+4590506 MS.gene22603:CDS
GCATGAAGAACATAAGTCTA+CGG 0.545627 5.1:-4594519 None:intergenic
TATGTTTAAGGCTGGAAGCA+AGG 0.546067 5.1:+4594201 MS.gene22603:CDS
ACGTTCCGTACTGTGGTTGT+TGG 0.546782 5.1:+4592984 MS.gene22603:CDS
ATAGCTGTTTGCAGAAGGAA+AGG 0.548165 5.1:-4597307 None:intergenic
AGCCAGGTCTTCATCATCCA+TGG 0.548286 5.1:-4590043 None:intergenic
CTGATTAATGGGCAAAGTGG+TGG 0.548486 5.1:+4593455 MS.gene22603:CDS
CCAGAGAATGTTGCAGTCCA+AGG 0.548500 5.1:-4594258 None:intergenic
GAGTTGCAACAAAGAAAAGT+TGG 0.549595 5.1:+4592891 MS.gene22603:CDS
ACAATCTGTTGGTGCAAGAG+TGG 0.549785 5.1:+4593400 MS.gene22603:CDS
TTGATGGTGACTGCCTTCAC+GGG 0.551285 5.1:+4593369 MS.gene22603:CDS
TCAAAATAGGGAAATGGTAT+GGG 0.552158 5.1:+4591373 MS.gene22603:intron
TTATCGGCCTCTTGTTGATG+GGG 0.553311 5.1:+4593217 MS.gene22603:CDS
ATAAAGTCCCAATAATCGGC+AGG 0.555863 5.1:-4591514 None:intergenic
GTCTTACATTGCTCATGCTG+TGG 0.557888 5.1:+4594387 MS.gene22603:CDS
GGAATCATATCGCAGAATCC+TGG 0.558934 5.1:+4598471 MS.gene22603:intron
AGACCAACCAAATCCATGCT+TGG 0.560056 5.1:-4592467 None:intergenic
ATGTTTAAGGCTGGAAGCAA+GGG 0.561534 5.1:+4594202 MS.gene22603:CDS
GAATGAACAAAACATTCAAG+TGG 0.562268 5.1:-4594439 None:intergenic
ACACATACCTTTATGTCTTG+TGG 0.563349 5.1:-4600268 None:intergenic
CTTCTTGTTGAACATCTCCA+AGG 0.564498 5.1:-4591537 None:intergenic
TCAAAAGGGGCTTCATTCAG+TGG 0.565101 5.1:+4594333 MS.gene22603:CDS
GATATGTATGATGCATATGA+TGG 0.565366 5.1:+4594544 MS.gene22603:CDS
TACCAATTTCACTAAGCTCA+AGG 0.566332 5.1:-4593016 None:intergenic
TTCCAGCCTTAAACATAGCA+AGG 0.567520 5.1:-4594195 None:intergenic
GATTACTGTTAGTTTAGCAG+TGG 0.567917 5.1:+4590202 MS.gene22603:intron
ACGTAACCACCCAGAAGCCT+CGG 0.569914 5.1:-4593744 None:intergenic
GCATGTACTTGCATGTAAGA+TGG 0.572057 5.1:+4590238 MS.gene22603:CDS
TGCTGCTCTAAGTCAAGCGT+CGG 0.572451 5.1:+4594099 MS.gene22603:CDS
ATGTAAAAGTATTACCTGAA+CGG 0.573895 5.1:-4591590 None:intergenic
GATCCAAAGGAATAGATGGT+CGG 0.576137 5.1:+4601628 MS.gene22603:CDS
AGGTTTCTGAGTATGTCAAT+CGG 0.576936 5.1:+4593066 MS.gene22603:CDS
GTAGATTACAAGGCTAATGA+AGG 0.577115 5.1:+4597172 MS.gene22603:CDS
TTCCATGGATGATGAAGACC+TGG 0.577323 5.1:+4590041 None:intergenic
GTCGAATAGATTTACATGCA+GGG 0.578084 5.1:-4590736 None:intergenic
GAAACTCTGAATTTCATGGC+AGG 0.578125 5.1:-4591403 None:intergenic
TGTCTGCCCATGGGGACAGG+TGG 0.578269 5.1:+4598573 MS.gene22603:CDS
AAGAAATTGGTTGATTTCAG+GGG 0.579708 5.1:+4592694 MS.gene22603:CDS
ATCGAGTGTTGGTGTATGGA+AGG 0.580065 5.1:-4593263 None:intergenic
GGGGAAACTGTCTGCCCATG+GGG 0.581263 5.1:+4598565 MS.gene22603:CDS
TCCACTAGCTGAAAGACTGT+TGG 0.585210 5.1:-4598250 None:intergenic
GCCTTGGAGATAAATGCACC+TGG 0.587059 5.1:+4590446 MS.gene22603:CDS
AGAAAGGTACAGATCTGAGA+GGG 0.587444 5.1:-4593888 None:intergenic
CAGGTTGAGAATTTATTGAG+TGG 0.590029 5.1:+4592413 MS.gene22603:intron
AAGACTTTGGACGTATTGCA+TGG 0.591011 5.1:+4593815 MS.gene22603:CDS
AAGAAAGGTACAGATCTGAG+AGG 0.591758 5.1:-4593889 None:intergenic
TTTCGAGAGGATATTATAGG+TGG 0.591930 5.1:+4594646 MS.gene22603:CDS
ATGTTGCAGTCCAAGGCACA+TGG 0.594030 5.1:-4594251 None:intergenic
ATCTGCTGTTCACCTCTGCG+TGG 0.594457 5.1:+4593341 MS.gene22603:CDS
TGTCACTGAAAGAGCTATCA+CGG 0.595023 5.1:-4594471 None:intergenic
AATCTAGATGCATTGGCTTG+GGG 0.595974 5.1:+4598546 MS.gene22603:CDS
CGACAGTACGTTCCGTACTG+TGG 0.596264 5.1:+4592977 MS.gene22603:CDS
AAAGATAGAAAGTCCTGTGA+AGG 0.597271 5.1:+4590533 MS.gene22603:CDS
GAAGGTTGACATTCTCTGGA+AGG 0.597340 5.1:+4597845 MS.gene22603:CDS
CATGAAGAACATAAGTCTAC+GGG 0.599915 5.1:-4594518 None:intergenic
ACTTATAGGATAATAGGACC+AGG 0.600610 5.1:+4592665 MS.gene22603:intron
CTTCTGGTGAACTATACCTG+AGG 0.600978 5.1:+4597901 MS.gene22603:CDS
CAGCCTTTGGAATCGATGCA+GGG 0.601191 5.1:+4598048 MS.gene22603:CDS
GAAATGGTGTGTAGATTACA+AGG 0.602564 5.1:+4597162 MS.gene22603:CDS
AGCTGCGTTTGTTAGAGAAG+GGG 0.603425 5.1:+4593120 MS.gene22603:CDS
CCACCCTGCATCGATTCCAA+AGG 0.603437 5.1:-4598051 None:intergenic
TTGCACGAAGGGTGATGAAA+CGG 0.604147 5.1:-4598325 None:intergenic
CTTCGTGTCCAGTCAATCAA+CGG 0.604908 5.1:-4597996 None:intergenic
ACAATGGTACATTCTGGGGT+AGG 0.605563 5.1:+4597946 MS.gene22603:CDS
CACAGAAAGCTCTTTGTGAG+TGG 0.606040 5.1:+4593840 MS.gene22603:CDS
CGGAGCGCTTTCTGCCTGTG+CGG 0.606596 5.1:+4594678 MS.gene22603:CDS
GATTACAAGGCTAATGAAGG+TGG 0.608968 5.1:+4597175 MS.gene22603:CDS
AAGAGTGGAGCTTAATGAGC+TGG 0.610194 5.1:+4593415 MS.gene22603:CDS
GCGCATAGGAATCAGAAGAA+AGG 0.612948 5.1:-4593904 None:intergenic
AGAAAAGCATGCTTGCACGA+AGG 0.614031 5.1:-4598337 None:intergenic
AATGACAATGGTACATTCTG+GGG 0.614211 5.1:+4597942 MS.gene22603:CDS
TTCTGCTACTCGTAAGCCAT+AGG 0.614340 5.1:-4593951 None:intergenic
CTGCTGTTCACCTCTGCGTG+GGG 0.615902 5.1:+4593343 MS.gene22603:CDS
AAATGAAAATGGCAAACCCA+AGG 0.616087 5.1:-4594982 None:intergenic
TGCAGCCTCAGAAACCGCAC+AGG 0.617889 5.1:-4594692 None:intergenic
TAAATAAGAAAAGAAATTTG+GGG 0.618902 5.1:+4591482 MS.gene22603:CDS
TAAGATGGAAACACAGTGGA+GGG 0.620322 5.1:+4590253 MS.gene22603:CDS
TTCTGGTGAACTATACCTGA+GGG 0.621953 5.1:+4597902 MS.gene22603:CDS
TGACTGCAAATGATATTCAG+AGG 0.622105 5.1:+4599747 MS.gene22603:CDS
TTGCTGTTGGAAGATGGTGT+AGG 0.623248 5.1:+4593521 MS.gene22603:CDS
GTGAACTTTCATGTGCTGGT+TGG 0.624208 5.1:+4594305 MS.gene22603:CDS
CCAATGCATCTAGATTGCCC+TGG 0.625626 5.1:-4598539 None:intergenic
ATGTCCAGCGGCAATGACAA+TGG 0.626224 5.1:+4597930 MS.gene22603:CDS
GATCACCAACAACCACAGTA+CGG 0.628291 5.1:-4592989 None:intergenic
TGATATCATATACTCAGAGA+AGG 0.632502 5.1:+4598602 MS.gene22603:CDS
ATTGTGGAATATACCCGTGA+AGG 0.633278 5.1:-4593382 None:intergenic
ATGGTCAGGAAATGATGACA+TGG 0.634506 5.1:+4601742 MS.gene22603:CDS
CAACTGATTAATGGGCAAAG+TGG 0.635243 5.1:+4593452 MS.gene22603:CDS
AGTCCCTCATCGACTTTCAG+GGG 0.635892 5.1:+4592532 MS.gene22603:CDS
ACTTTGTCCCCATCAACAAG+AGG 0.637655 5.1:-4593224 None:intergenic
GGGTATATTCCACAATCTGT+TGG 0.639665 5.1:+4593389 MS.gene22603:CDS
TGGATCGTCTGAATCATGAA+AGG 0.640285 5.1:+4594068 MS.gene22603:CDS
TGATCAGACACTAAGTGAGA+CGG 0.642559 5.1:+4600180 MS.gene22603:CDS
AAAGCTTCTGCAATTTGACA+GGG 0.645312 5.1:-4593041 None:intergenic
TACGGGTCAATGTCCCAGGA+AGG 0.649365 5.1:-4594501 None:intergenic
GTGAGTGGTTGTCTATGACA+GGG 0.649548 5.1:+4593855 MS.gene22603:CDS
CCCCAAAAGAGCCTAAGCAG+TGG 0.650394 5.1:+4599702 MS.gene22603:CDS
GGATACAATAATCAGCCCAA+AGG 0.652493 5.1:+4591225 MS.gene22603:CDS
CTGGTTGGAACAGTCAAAAG+GGG 0.654096 5.1:+4594320 MS.gene22603:CDS
TGAGAGCAATCATCGAGTGT+TGG 0.655705 5.1:-4593274 None:intergenic
TTGTTTGCCACTCCAAAACG+GGG 0.657316 5.1:-4593633 None:intergenic
GACTTGACTGCAATGCTGTG+GGG 0.657362 5.1:-4594950 None:intergenic
TTGGCCGGGAAATAATGATG+TGG 0.663064 5.1:+4601775 MS.gene22603:CDS
GAGTGTTGGTGTATGGAAGG+AGG 0.664798 5.1:-4593260 None:intergenic
GGAGCTGATATCTTGTTCCG+AGG 0.666220 5.1:+4593727 MS.gene22603:CDS
GTCCCTCATCGACTTTCAGG+GGG 0.671305 5.1:+4592533 MS.gene22603:CDS
ATTATAGGTGGCGAGCCAGT+CGG 0.673261 5.1:+4594658 MS.gene22603:CDS
GGAGTTGTGGATAATCTCCA+GGG 0.675539 5.1:+4598522 MS.gene22603:CDS
CTTATAGGATAATAGGACCA+GGG 0.676685 5.1:+4592666 MS.gene22603:intron
CCAGCACATGAAAGTTCACG+GGG 0.676940 5.1:-4594301 None:intergenic
ATGGTCGCAAAGTTATGACA+AGG 0.678703 5.1:+4601709 MS.gene22603:CDS
GTAAGATGGAAACACAGTGG+AGG 0.681070 5.1:+4590252 MS.gene22603:CDS
CCATCAAAATCCCCACGCAG+AGG 0.684429 5.1:-4593353 None:intergenic
CTGAGGGTTACTATGTCCAG+CGG 0.685559 5.1:+4597918 MS.gene22603:CDS
CTTGTTCCGAGGCTTCTGGG+TGG 0.698988 5.1:+4593738 MS.gene22603:CDS
ATGGTCGGGAAGTTATGACA+AGG 0.704571 5.1:+4601676 MS.gene22603:CDS
CCAAACTTCTCATCTCTACG+AGG 0.721582 5.1:-4600238 None:intergenic
CCTTTGGAATCGATGCAGGG+TGG 0.723625 5.1:+4598051 MS.gene22603:CDS
CATGTAAGATGGAAACACAG+TGG 0.747038 5.1:+4590249 MS.gene22603:CDS
TAAATGCTAAAGGAATGACG+CGG 0.814027 5.1:+4598286 MS.gene22603:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.1 gene 4590045 4601814 4590045 ID=MS.gene22603
chr5.1 mRNA 4590045 4601814 4590045 ID=MS.gene22603.t1;Parent=MS.gene22603
chr5.1 exon 4590045 4590113 4590045 ID=MS.gene22603.t1.exon1;Parent=MS.gene22603.t1
chr5.1 CDS 4590045 4590113 4590045 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4590203 4590274 4590203 ID=MS.gene22603.t1.exon2;Parent=MS.gene22603.t1
chr5.1 CDS 4590203 4590274 4590203 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4590434 4590554 4590434 ID=MS.gene22603.t1.exon3;Parent=MS.gene22603.t1
chr5.1 CDS 4590434 4590554 4590434 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4590651 4590775 4590651 ID=MS.gene22603.t1.exon4;Parent=MS.gene22603.t1
chr5.1 CDS 4590651 4590775 4590651 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4591207 4591263 4591207 ID=MS.gene22603.t1.exon5;Parent=MS.gene22603.t1
chr5.1 CDS 4591207 4591263 4591207 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4591382 4591597 4591382 ID=MS.gene22603.t1.exon6;Parent=MS.gene22603.t1
chr5.1 CDS 4591382 4591597 4591382 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4592416 4592571 4592416 ID=MS.gene22603.t1.exon7;Parent=MS.gene22603.t1
chr5.1 CDS 4592416 4592571 4592416 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4592673 4592768 4592673 ID=MS.gene22603.t1.exon8;Parent=MS.gene22603.t1
chr5.1 CDS 4592673 4592768 4592673 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4592855 4595130 4592855 ID=MS.gene22603.t1.exon9;Parent=MS.gene22603.t1
chr5.1 CDS 4592855 4595130 4592855 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4597162 4597334 4597162 ID=MS.gene22603.t1.exon10;Parent=MS.gene22603.t1
chr5.1 CDS 4597162 4597334 4597162 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4597829 4598088 4597829 ID=MS.gene22603.t1.exon11;Parent=MS.gene22603.t1
chr5.1 CDS 4597829 4598088 4597829 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4598186 4598359 4598186 ID=MS.gene22603.t1.exon12;Parent=MS.gene22603.t1
chr5.1 CDS 4598186 4598359 4598186 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4598486 4598623 4598486 ID=MS.gene22603.t1.exon13;Parent=MS.gene22603.t1
chr5.1 CDS 4598486 4598623 4598486 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4599554 4599801 4599554 ID=MS.gene22603.t1.exon14;Parent=MS.gene22603.t1
chr5.1 CDS 4599554 4599801 4599554 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4600171 4600282 4600171 ID=MS.gene22603.t1.exon15;Parent=MS.gene22603.t1
chr5.1 CDS 4600171 4600282 4600171 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
chr5.1 exon 4601497 4601814 4601497 ID=MS.gene22603.t1.exon16;Parent=MS.gene22603.t1
chr5.1 CDS 4601497 4601814 4601497 ID=cds.MS.gene22603.t1;Parent=MS.gene22603.t1
Gene Sequence

>MS.gene22603

ATGGATGATGAAGACCTGGCTACAGTGCACAAAGTGCCATCTGCTCTCATAAAAGCGATAAAGTTTGAGGTTTTAACTGGAGAAGATATAGTTAAGTGTATTCTTGTTTATATATATATATATATATATATCAACTCTGCAGTTATTGTGTGTATCAGATTACTGTTAGTTTAGCAGTGGAATTAGTTCACTTGCATGTACTTGCATGTAAGATGGAAACACAGTGGAGGGTGGGTTGAAAATACATTCTTGTTTGGGTGGATTGGTTACCTTTAACCTATAAAGGGAGACAAGCCTATTTTGCGGAATGGATTATCGATCATAAATCATTTTGATTGACATGTAACTTATTAATCTCATATTTATGTTATTTAGTTTTACGCCTGCAGGAGAAGATCTCAGCCTTGGAGATAAATGCACCTGGACAAGTCACTTGTTCTGATCTGGGACTTCCAAATTCTTCTTATGGGTGCACAACATGTGGTTCAAAAGATAGAAAGTCCTGTGAAGGTGTGGATGAACATATTATATGGAAAATTGGTTTAGAGATTTGTGGTATGATTTTTGAAATCTACTAGATGTTGATCAATTAGTCGATTATTTCAGGTCATTTTGGAGCTATCAAATTTCCTTTTACCATTTTACATCCATACTTCATGGCAGAGATTGCAGAAATCTTGCAAAAGATTTGCCCTGCATGTAAATCTATTCGACAAGAATTACGTGTTAAGGTCTGGTATCTTTTACTTCTACAACATTCGAACAGTTTATCTGGTTTTGTTATAACACAGACCTGGTTTTAGACCACGTCATTTTGCATAGAATTTCATATAATCAATTTTCCATTCTATCTTGAGATGCTTAAATTATATGGCAACTTATCAGGGTTTTATTTATCTTTCCAAAATATTTCCCAAGTTTTAAGTTATATGAGATTCTCAAGTACAATAAGACATCCACTGAAGAAGTATGCATGCTTAAGTACAATGGTACATTGGTACCTGTAGTCTTTGCTCCCAACTGTCCAAAAAAATAATCCTATAATTTTGGATTTTCTACGGATGTTTGTTTGCATGTTACTTTTATGTAGGTTGTCCGTTTGGATTTGCAATTTTTCTTGTTATCTGCTTCCTATTGTTAAGGTTCTATTTCATGCTTACAGCGTGCTAAATCACTCCTTGGATACAATAATCAGCCCAAAGGTTGCAAATATTGCTGTGTAAGTTTATTTTAGGATCTTCCTTGATTCACTCTGAAATAAATTTATTTACTTCCCCTCTTTTTTTTTTTTTTATATTATTTTCTGCCACTCTAAGACAGCTTATGCATCAAAATAGGGAAATGGTATGGGTCGTTATCCTGCCATGAAATTCAGAGTTTCATCCAATGATTTCTTCAGGAGAACTGCAATCATTGTTGAAGTAAATGATATATCTTTAAATAAGAAAAGAAATTTGGGGCGAGGATTACCTGCCGATTATTGGGACTTTATCCTTGGAGATGTTCAACAAGAAGAAAATCATGTAAATAGAAAGGTTTTATCACCCGTTCAGGTAATACTTTTACATTCATGTTGTACTTTTGTATCATTATCCTTTGGTACTATGAATTTGCACTATATTAAAATTCATTCTTTGCTAGAAGGGTACTGGTATGTATGCTCCTTGATAATATAATTGATAACGAATGGAGTTATGTGCTGTGTTCAGCTCAACTGCTTGTTAGCACCTCTAATGAAGACGTTGCTTCAAAAGCCTAAATTAGCGTCACATTTAATGTATACAAATTGTTTATCATATGCAAATTTGAGAAGTCCAAAAACATTCATGTGATGATTTTTATGCCTGCTACAAATGAGACAGGGATGGTACTATTATATATCTAATCTTAAAATGGTCCGAAACAAATTTATTCATTACTGACTGAAAAAGTAGGATTCCAACTTGTTAGTTAGACTTTAGTTACTTGGTCTGTTTTTATTACTTTATTGATGATTTTTACGCTTGCTACAAATGAGACAGGGATGGTACTATTATATATCTAATCTTAAAATGGTCCGAAACAAATTTATTCATTACTGATTGAAAAAGTAGGATTCCAACTTGTTAGTTAGACTTTAGTTACTTGGTCTGTATTTATTACTTTATTGTGATCCACCATACCTTGGAGAGTACCTATTGATGTTTTATGGATTGACTGGGAATGACTTGCTGAAATAAACAGTCCATTTCTTTCAATAGAAGAAAATTCCCCTTTTCAAGGTCCTGAATCTTATGATATTCTAATTTGTTGACTCATTTTACTTCTGTGGTCATTCTTTTTTTCTGGTGCTTGACTAATGTAAATTTTATATTTCCTTTTTGATATTCAGGTTGAGAATTTATTGAGTGGTGTTGATCCGAACTTCATTGAAAAGTTTATTCCAAGCATGGATTTGGTTGGTCTCAGTTGCTTCTTGGTGGCGCCGAATTGTCATCGTGTGACAGAAGTCCCTCATCGACTTTCAGGGGGATATCCATTGAGTTTCGTAAGTGTATTCTTCCTCTTTCTAGTAGTCCTTAATATTTATAAGCCGTCACTCGAGTTCCAATTTTTAATATGGTATTCTGTCCGGTTAAATACTTATAGGATAATAGGACCAGGGCTTGCAAGAAATTGGTTGATTTCAGGGGTACAGCAAATGAGTTAAGTTCTCGTGTTTTGGATTGCCTGAGATTTTCCAAGGCAAGTTTCTCTGTTGCTTCATCCTTTGTTTTTCCCACTTAGTCAAAATTACACTTTTTGCTTATGGTTTTACCTTTAAAATGCAGATAAATCCTGACAGAACGCCAGTTAATATTTTTACTGAGTTGCAACAAAGAAAAGTTGGAGAAAATGCTTGCAATTCGTCTGGTTTAAGATGGATGAAAGACGTCGTTCTTGGAAAACGCAACGACAGTACGTTCCGTACTGTGGTTGTTGGTGATCCAGACCTTGAGCTTAGTGAAATTGGTATACCCTGTCAAATTGCAGAAGCTTTGCAGGTTTCTGAGTATGTCAATCGGCAAAATAGGCAAAATTTGCTTTATTGTTGTGAGCTGCGTTTGTTAGAGAAGGGGCAGATAAATGTTCGCAGAAATGGTAATCCAGTAGTTTTGTATAAAAAACAAGATTTGCAGATAGGAGACATATTTTATCGGCCTCTTGTTGATGGGGACAAAGTGTTGATAAATAGGCCTCCTTCCATACACCAACACTCGATGATTGCTCTCACAGTTAGGGTTCTTCCAATATCTTCTGTAGTATCTATTAACCCAATCTGCTGTTCACCTCTGCGTGGGGATTTTGATGGTGACTGCCTTCACGGGTATATTCCACAATCTGTTGGTGCAAGAGTGGAGCTTAATGAGCTGGTTGCTTTGGACAGGCAACTGATTAATGGGCAAAGTGGTGGAAATTTGCTTTCACTTTCCCAGGATAGTTTAACTGCTGCACATTTGCTGTTGGAAGATGGTGTAGGTTTTAATATTTACCAAGTGCAGCAGCTTGAAATGCTCTGTGATAAAGAATTAACATCTCCTGCAATTTTTAAAGCTCCTTCAAGTAATACCCCGTTTTGGAGTGGCAAACAATTGTTCAGCATGCTTTTGCCTTCTAAATTTGACTATGCCTTTCCTTCAAATGATGTTTTTGTTAAAGACGGGGAGCTGATATCTTGTTCCGAGGCTTCTGGGTGGTTACGTGATTCAGAGAACAATGTTTTCCAAAGTCTTGTGGAACATTTTCAAGGGAAGACTTTGGACGTATTGCATGGTGCACAGAAAGCTCTTTGTGAGTGGTTGTCTATGACAGGGTTTAGTGTTTCCCTCTCAGATCTGTACCTTTCTTCTGATTCCTATGCGCGTAAAAACATGATGGAGGAAATCTCCTATGGCTTACGAGTAGCAGAACAGGCTTGTGATTTCAACCAGTTATTGGTAGATCATTACTCTGATTTTCTTTCAGCAAGTCCAGAAGAGAATGAAAATTTTGTGACTGTTGATGTGGATCGTCTGAATCATGAAAGGCAAATATCTGCTGCTCTAAGTCAAGCGTCGGTCGATGCTTTTAGACATGTTTTTCGCAATATTCAGAGTTTAGCTGATAAGCATGCGTGCAAGGACAATTCTTTCCTTGCTATGTTTAAGGCTGGAAGCAAGGGTAATTTACTGAAATTAGTGCAACATTCCATGTGCCTTGGACTGCAACATTCTCTGGTTCGCTTGTCATACAGAATTCCCCGTGAACTTTCATGTGCTGGTTGGAACAGTCAAAAGGGGCTTCATTCAGTGGAGATGTCTTCAGATACTCTTGAACCAAACCAGTCTTACATTGCTCATGCTGTGGTTGAGAGCTCTTTTCTTACTGGGTTGAATCCACTTGAATGTTTTGTTCATTCAGTGACAAACCGTGATAGCTCTTTCAGTGACAACGCAGACCTTCCTGGGACATTGACCCGTAGACTTATGTTCTTCATGCGTGATATGTATGATGCATATGATGGAACAGTGAGAAACTTATATGGCAATCAACTTATACAGTTTTCTTATGATGCCGAAGAGGATTCATCTTGTGATAGCTATTTTCGAGAGGATATTATAGGTGGCGAGCCAGTCGGAGCGCTTTCTGCCTGTGCGGTTTCTGAGGCTGCATACAGTGCTTTGAGTCAACCTATTAGTCTACTTGAAGCATCACCGTTGCTGAACTTAAAAAATGTTCTAGAGTGTGGTTCAAGGAAAAAAGGTGGTGATCAGACCGTGTCTTTATTTTTGTCTGAGAAAATTGGTAAACAAAGAAATGGGTTTGAGTATGCAGCACTAGAAGTTAAGAATTATTTGGAAAGATATATGTTCTCAAACATTGTTTCTACTGTCATGATAATATTCACCCCACAGCATTGCAGTCAAGTCAAATACAGTCCTTGGGTTTGCCATTTTCATTTAGACAAGGAAAATGTAACAAGAAGAAAATTAGAAGTGCATTCTATCATTGACTCTCTTTACCAGCAATATGACTCCTTCAGAAGAGAGTCAAAAGTCATTCTTCCCAGTTTGAAAATATCAAGCAAGTAAGTTTCTTCCATTCTGGTACTTCAAGCGTTGTCTTTTGTCATTGATTGAGATATTCACTGTTCATAATGACTTTAAAAACATTGTTGCTTTATAAATTTCTGATTCTTCCCACTGTCTCTTATCCCAGAGTTCTATATTTGCTTTGCTTTGTATTCTCAGCATTGAATGTTATTTAGATTACATCTAGGCATATTCTTCCTCTGTTTTCCTTATATTATATCATGATTCAGTAACTTGTCTTCCTTTCTACATTTCATGAAAACTTTGGGACTTTTAATTATTTTGGTACCACCCTCCCTTAAGTAAAACTGAAGTCCTCTTGCTTTGGTAAAATTTGATACAGAACTAAAAGAACCTTCTCAAATAATAGAATGGAAGAGAAAGGTTGAAAATCAGAAATTAGGGTAGACAAGTACTGGATAATCTAAAACTATGATTTAGTTTAATGCAATTACGCACTCAAAATTTCAATTACAACAAGGCCACTACAGAGGAATTTGGATATTTTAGTCTAATAATTTTCAATATCAATTGCGGGTTAACTTTTTTACATTCAGTATTGTTTTATAGACCAGATACATGTTGTATGGAATAAATCTTTTATAAGAGTGTGTTTGGCCCTATTTTTTTGAGGTTTTAAAGTTACTTTTAGGATAAAGTTAAAAATTAGAACTTAGAAGTTAAAAGTTGTTTGCTATTTGTCGTTTTTTTTCAACTTTGTTAGTATTTTTAGGTTAAAATCTGTTTGGTAATTAATTCTTAAAGAGCTTTGAGATTTTATTATAAATTATCATAAATCAAATAAAAGCCATTTTTTTTTTATAAAAAAACTAAATTCTAAACAGACCTGATTTTTGTCGGGGACGGCCCTGTTAATATTGTTTGATCTCTACATCTTTATTATAAAAAATGTACTGTCAAACACTGATATTATTGTCTAAATCCAAACCCAAATTTACATACAAAATAAAATAGTATAAATATGTAAGCGCCAAATTTTTTTTTTTTATAAATACATAGAATTAGGGTATGGCAGGTTTGGTGGGAACTCCTATAAAATAAATAAAAGGTTTAGTGGGAATTGTGTAATGAGATACACAATAAAGTAGAATAAAAGAAAAAATGTCCCCTGAGGAAATCGAATGGTGAAGCATTCTGCAAAGTGCCATGTAAGTTGGTTTGAAGTTGATTTCAACATCTTATTTTGAAAGTCACTTCTATTTGGTTTTCTTCATTACAAATGAGATACTTTTTATTTTTTTATTTTTTATAAAGAGCTGTATTAAAATTGTGTTTGGCCCTACTTCTCTGTAGAAGTGGAAGAGAAGTAGAAAATAAGGAGGGCCAAACATGCTCTAAGTGTCAAGGTAGTTTTGAGTTTCAATTTTGATCAAGAATAGAGGACATGGGTGATTGACTAAACTATAATTTTGTGACTCTTCATGAAAAATGATATTTTGCCGATATTCAATGAATTTTGTGAACTTTATGAAGTTATAATTCTATATGGTCATAGAAGAACATAGAAGAATAACCAAAGCTATTATTCTTATTGTAGTTGATTCTGAAGGAATCTTTGTTTATCTTTTAGCATTGAAGTTACTATTGCCACAATTGCTGAAATTGGGACCAGTCACTTCTCAACAAGAGAAATACTGTGTTCTTGCTGTATATAACAAATAAAGAATCATATATTCAGTAGTTACACGTGCACACACATCCATGACCCAGTACCTACTGAAATGTAATCCCTTGCTGATATGTTGAGGGATTGGATAACTTTTGTTTCATTGATATTTTTCAAATTTGTTGTTGTTTATGTTTCTTTATGTTTTATTTTCAAGTTAAGAAGGGAGCCCTTTTCCTTCTAACCACGTTTAATTTATATTCTCTGTCTTAATGAGTTTCTTCTTTTATCAAAATGATTATGATTTTAACAGTTTCTATTATCTTAGTTTTTCTGCTTAAATTCTCATTCCTGCTTGGAGCTTTTACCATGGCTACTAACCAAGTCAATGAAATAGCAGGAAATGGTGTGTAGATTACAAGGCTAATGAAGGTGGAGAAACCTCTGTTTGTAATGAAAAAGATGGTGAAGATTGCATCACTGTTGCAGTTGTCGAAGACTCTAAGAATTCTGTACTACTGGACTCTGTTCGCAAGAGTCTGATACCTTTCCTTCTGCAAACAGCTATAAAAGGTCTGTAGTAATATAATCAGAATATCACCTGGAGGTTAAAATGATTAAATGAGCCTTTTAGAGAATCTATTTCCAGGACATTTCTTTAACTGTTGTTCTAGTTCAAATTTTGTTTCCGCTACATAATGACGGTTGAGCTTTTCTGTATCATCATATCTATTTGATGTTTCCAACTTCAATTCAATAAACTCTTGCTTAATTGGCTATTTTGAAATCTTGGTGGAGCTAAAAATGTGTTTTTTTCCTCTTTTCTTTTTGGGTCATGGAGTTGAAGCGTAGTTGTATAAATAAGCCAGGTTCGTCCTGGTCACGGGACTAGGTCACTAAATGATCAGATTATAATATTCAGTTTTTATCACAACTCCACTACATCTTGTTTGATATATACGTGAATCTGGTTTGATACATACATGAATACTTATCGCTTGTTATTTATAGTGAAGTAAAAAATGCTAATACTTAGTACTATCATGAATTTCCTAAATGTCCTTTAGGATTTTTGGAGATCAAGAAGGTTGACATTCTCTGGAAGGATCTGCCAAAAGTAACGAAATCTTATAATGGTTCTTCTGGTGAACTATACCTGAGGGTTACTATGTCCAGCGGCAATGACAATGGTACATTCTGGGGTAGGCTGATAAATCACTGTCACAGAATAATGCCGTTGATTGACTGGACACGAAGTCATCCTGATAATATTCACCATTTCTGCTCAGCCTTTGGAATCGATGCAGGGTGGCAGCATTATTTCCATGTATGATTAAATAAATTTCCTTCCTTTGTATTATGTTCCGATCTGAACGTTATGGAGATGTGTATTTAATTTGCTAGAATATGATTTTTACATGTAGAATTTGTCATCTGCAACTTCTGATACTGGCAAGTCAATTCTTCCTAAGCATCTGCGTCTTGTTGCCAACAGTCTTTCAGCTAGTGGAGAGTTTGTGGGATTAAATGCTAAAGGAATGACGCGGCAAAGAAAACATGCATCCGTTTCATCACCCTTCGTGCAAGCATGCTTTTCTGTCAGTTTTTGCATTCATATTCCAAACAAATGCTTCATATATATATATATTTTTTTTTTATGTAATGGGATTATAATTTATGATAACCTCTAAAATTCATGCTGAAATTGTGGAATCATATCGCAGAATCCTGGTAGTTCCTTTTTAAAAGCTGCGAAGTCTGGAGTTGTGGATAATCTCCAGGGCAATCTAGATGCATTGGCTTGGGGAAACTGTCTGCCCATGGGGACAGGTGGACAGTTTGATATCATATACTCAGAGAAGGTGAAGTTATGAATTTTCTTATCTATTAAAATATTAAACTTTTAGCTTCCAATGACCTTTTGATTGATCATTCATATGTCTTCATTTTCAAAAACCCCTAGAATGTGCTGAGCAGCTGTGCGAAGGTTTTATTGTATAATTAAATTTCATTGTCCCAAAACATTAATTTTTTTCTTATTTTTGAAAAATTTAATTGAAAATTGATTTCAATGACATCAAAGTTATGATGCATAGGTACGGGTACGGTACCCGGTACATAATACGGCAAATTTTAAAAAATGACGGTACGGGTACGTTGATATAAAACATCAAAAAAGAAAAAATTTCAAGTACCATTTTTGTTGTAAAAACATGCTTAGAAAAAAATCAATTATAATAAAAAATAGTAGCGTTATTCGTATTTTGATCATGTGTTTAACACACTTCTATCATCATGTTGCTTAAGAGTTTTACTTTTTTGTGCACCCCCTCTACTATTTTCATCAAAAGCAAGAGAGAGAATTGAAATACAATAAAAAAGCAAAATAATTTTGGTTATTTTTCCACCGCCCGTACGTTTTTGCCGCAACAACTACGGCGAAACAACTAAGTAAAAATGGTATGGTTCAGTACGTAAGTTACGAGTACCGTACGCGTACCTGCTATGGGTGCATACCCGGTACCAGTACTTCTCCATGTTTGGAGTACCCATGCTTTAGAGCATACAAGTCATTTTAATTTTCTGTTGTAAATTTTTGTCAACTGTTCTAAATGAAAAGCAGCATCCTGGCACTTACCGCAGGCTTTCTTATTGTTCATTTCCCTTTCCAAATATAGCCATATATAATGAATAATATGAACTTCCAGTTAAATTTCTTATTGTACCACTTCCTTCTCCAATTTTAATTATCAATTAATTAATTTAAATTTTACCATGGTTGTTTTTAACAGGTAGAGGAGATTGATAAGTCTGTAGATGTGTATGGCCTGCTAGAAACCAGTTTTAACCAGATGGACCAAGAGATTAATACCCTTCAATCTCGCAAATATTCATCTGGAAAATGCAGTTCAGATTTTAGGTCTAAAAATGGGGGTTACACCCCAAAAGAGCCTAAGCAGTGGAAAAGTGTTTTAAGAAATTTCATGACTGCAAATGATATTCAGAGGCTTACTTTTGATGCAAGGGTCATACTGAACAAGTAAGATAACATATATCTTTTCTATGGGTTGATAAGGCTGTCTGTGCATTTGATGGCATGTAGCATTGTATCTATTTATTGATATTGACATTACAATATATAGGATGCATTTATATCATATACTGCATTTATGTAGTGATTTGTCCTATTATTTCAAATTTATAAATAACCCCCTGTAGTTTGAAAGCTTCGTAGCGGGGTTTCCTTGGTTTTTAATAGCTGCTTGTTTTCTGTTTATTGCTACTAAATTTGAGGTATATATATTTTTTTGGACATGGTTTTATTTGGTTGTCTAGGTTGGTTCCCTTAGCTTAATCTGTGATCTCTGCTTTACAGAATAATTTTCAACTTTGGATGTTGTCTTTGTAGGTATCAGATTGATCAGACACTAAGTGAGACGGACAAGTTAACAATAATGAAGGTTTTGCATTTTCATCCTCGTAGAGATGAGAAGTTTGGCTCTGGACCACAAGACATAAAGGTATGTGTGCTTGCATGAAAGTGGTTTATACATGTGCTCAATTATTATTTTTGTTTCATTTCTTCATGCTAGCGTGTTTAAGTATTGGCAATGAGTAGTAAATTGTAACGCCTGACATCAAAATTGGGAAATTTTTCTATATTTTCACTGAAGAAAATTATTATCTCTGCTTAAAGAAAATTTCCTTGGAATACATTATTCTTCCTTTCCTCTTGTGTGGCAATTAGATATGGTGCCATTATAAGCTAAACGACACTGGTACATGGGCTGATGATAGCATTTTATGCATCGAGGAATTTTTCAAGTTTTTTGTTAACATCTTAGTACATTATCATCGGATAATCTTGTTTAAAAGATTATGCTTATTTGTTCTTCATTCCAAAACTCGTATTTGTTTAACTTCAAAACTAGGTTAAAGCTGCCAAATATTATAATGAAAGCAAAATGAACATTACACAGCCATTTTATGTGAAAATAAGAATGAAGAGAAATATTCAAGTGTTGGTGACCTTAAATTGATGGGTCAGAAATTTTTCCCACACTTGTATAAAATCTGTAAACTGAAAAACTGTAGATGGCTATTAACTTTCCTACAAGGAAAACTTGCATTCCATAGAATCATTTGTGGTGTAAACCGTTTCAATGATATGGAAGCTATAGTAAAGAATATTTTTAACTTTCAAATGCAACGGGCCTCTTTATTAGGATTATGGCCCAATTGGGATTAGCTTCTAGTTTATTGGAGCTTCTAAGTTAAAATGGGTATTAGTGTATGTTTCCTATGAAAAAAATCCTTATAAACATAACGATATTTATGGAAAAGTTAAATGGGAACTTCTGAAGAAATTGAGACGCAGTTCAAAATTATTTAAAAAACTCTGGCAGTGGAAGGGAAGAACAGGCTTGTGGTCTTCTGAAAACCCCGGTAATATGCCCCTCCCCCATCCCCCCACCCAAATTGGGGGTTTATCCTTTCCAAACAAGGTGATGGATCATCCTCCCTTCCTCTTCTCACTCAAACATAGGCTTAGTATATTTTGCAAGTACTTTTTTAGCAGTCTTGTTTTTCAGTTTATCCAAATAGCTCTAGGAAAGAGGTGCTTGTTTGCATTTTGGTTGTTTTCCACCAATGTCTTTACCAGTTAAATGCTCCGTGTTATAAAGTTCCCTTCATGCTTGTGGTTGCCCATGCATTTTTTCATGTCTACTCACAGGTTGGATGGCATCCTAAGTTTACAGACAGCCGTTGCTTTTTTATAATACGAAAGGACGGGTCTGTTGAAGATTTTTCATACCGCAAATGCATTCTTGGTGCTCTTGATATTATTGATCCGAAAAAGTCAAAGATCCAAAGGAATAGATGGTCGGGAAATGGTGATATGGAAGCTAAAAAATGGTCGGGAAGTTATGACAAGGAAGCTAAAAAATGGTCGCAAAGTTATGACAAGGAAGCTAAGAAATGGTCAGGAAATGATGACATGGAAGCTAAAAATTGGCCGGGAAATAATGATGTGGAAGTGACTAGCATCTGA

Protein sequence

>MS.gene22603.t1

MDDEDLATVHKVPSALIKAIKFEITVSLAVELVHLHVLACKMETQWREKISALEINAPGQVTCSDLGLPNSSYGCTTCGSKDRKSCEGHFGAIKFPFTILHPYFMAEIAEILQKICPACKSIRQELRVKRAKSLLGYNNQPKGCKYCCGNGMGRYPAMKFRVSSNDFFRRTAIIVEVNDISLNKKRNLGRGLPADYWDFILGDVQQEENHVNRKVLSPVQVENLLSGVDPNFIEKFIPSMDLVGLSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPDRTPVNIFTELQQRKVGENACNSSGLRWMKDVVLGKRNDSTFRTVVVGDPDLELSEIGIPCQIAEALQVSEYVNRQNRQNLLYCCELRLLEKGQINVRRNGNPVVLYKKQDLQIGDIFYRPLVDGDKVLINRPPSIHQHSMIALTVRVLPISSVVSINPICCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDRQLINGQSGGNLLSLSQDSLTAAHLLLEDGVGFNIYQVQQLEMLCDKELTSPAIFKAPSSNTPFWSGKQLFSMLLPSKFDYAFPSNDVFVKDGELISCSEASGWLRDSENNVFQSLVEHFQGKTLDVLHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMMEEISYGLRVAEQACDFNQLLVDHYSDFLSASPEENENFVTVDVDRLNHERQISAALSQASVDAFRHVFRNIQSLADKHACKDNSFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLSYRIPRELSCAGWNSQKGLHSVEMSSDTLEPNQSYIAHAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSYFREDIIGGEPVGALSACAVSEAAYSALSQPISLLEASPLLNLKNVLECGSRKKGGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERYMFSNIVSTVMIIFTPQHCSQVKYSPWVCHFHLDKENVTRRKLEVHSIIDSLYQQYDSFRRESKVILPSLKISSKKWCVDYKANEGGETSVCNEKDGEDCITVAVVEDSKNSVLLDSVRKSLIPFLLQTAIKGFLEIKKVDILWKDLPKVTKSYNGSSGELYLRVTMSSGNDNGTFWGRLINHCHRIMPLIDWTRSHPDNIHHFCSAFGIDAGWQHYFHNLSSATSDTGKSILPKHLRLVANSLSASGEFVGLNAKGMTRQRKHASVSSPFVQACFSNPGSSFLKAAKSGVVDNLQGNLDALAWGNCLPMGTGGQFDIIYSEKVEEIDKSVDVYGLLETSFNQMDQEINTLQSRKYSSGKCSSDFRSKNGGYTPKEPKQWKSVLRNFMTANDIQRLTFDARVILNKYQIDQTLSETDKLTIMKVLHFHPRRDEKFGSGPQDIKVGWHPKFTDSRCFFIIRKDGSVEDFSYRKCILGALDIIDPKKSKIQRNRWSGNGDMEAKKWSGSYDKEAKKWSQSYDKEAKKWSGNDDMEAKNWPGNNDVEVTSI