AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22701


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22701.t1 MTR_7g117395 99.160 595 5 0 1 595 1 595 0.0 1215
MS.gene22701.t1 MTR_8g027610 70.687 597 161 5 1 590 1 590 0.0 847
MS.gene22701.t1 MTR_3g091400 57.143 567 220 7 35 591 25 578 0.0 642
MS.gene22701.t1 MTR_8g099565 57.867 572 216 9 37 590 27 591 0.0 640
MS.gene22701.t1 MTR_5g009120 55.652 575 225 10 29 590 23 580 0.0 630
MS.gene22701.t1 MTR_8g066090 39.189 296 150 6 266 547 146 425 2.87e-59 209
MS.gene22701.t1 MTR_0009s0120 40.000 300 146 7 266 547 148 431 8.56e-59 207
MS.gene22701.t1 MTR_7g017360 40.214 281 135 8 284 547 162 426 6.51e-55 197
MS.gene22701.t1 MTR_1g066390 32.278 158 100 5 37 193 1 152 1.33e-14 73.9
MS.gene22701.t1 MTR_1g066390 32.278 158 100 5 37 193 77 228 1.33e-14 73.9
MS.gene22701.t1 MTR_7g116360 32.278 158 100 5 37 193 1 152 1.43e-14 73.9
MS.gene22701.t1 MTR_7g116360 32.278 158 100 5 37 193 77 228 1.43e-14 73.9
MS.gene22701.t1 MTR_4g080920 31.646 158 101 5 37 193 1 152 1.60e-14 73.6
MS.gene22701.t1 MTR_6g061930 32.278 158 100 5 37 193 1 152 3.15e-14 73.9
MS.gene22701.t1 MTR_6g061930 30.380 158 88 5 37 193 77 213 3.67e-12 67.8
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 1 152 3.17e-14 73.6
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 77 228 3.17e-14 73.6
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 1 152 4.03e-14 73.6
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 77 228 4.03e-14 73.6
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 1 152 4.45e-14 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 77 228 4.45e-14 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 153 304 4.45e-14 73.9
MS.gene22701.t1 MTR_5g092700 34.074 135 83 4 37 170 1 130 5.30e-14 70.1
MS.gene22701.t1 MTR_4g073580 34.074 135 83 4 37 170 1 130 5.30e-14 70.1
MS.gene22701.t1 MTR_4g091580 32.278 158 100 5 37 193 153 304 5.98e-14 74.3
MS.gene22701.t1 MTR_4g091580 32.278 158 100 5 37 193 229 380 8.20e-14 73.9
MS.gene22701.t1 MTR_4g091580 32.278 158 100 5 37 193 1 152 9.21e-14 73.6
MS.gene22701.t1 MTR_4g091580 32.278 158 100 5 37 193 77 228 9.21e-14 73.6
MS.gene22701.t1 MTR_7g116360 32.278 158 100 5 37 193 49 200 7.15e-14 72.8
MS.gene22701.t1 MTR_7g116360 32.278 158 100 5 37 193 125 276 7.15e-14 72.8
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 1 152 8.12e-14 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 77 228 8.12e-14 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 153 304 8.12e-14 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 229 380 8.12e-14 73.9
MS.gene22701.t1 MTR_8g081020 32.278 158 100 5 37 193 1 152 8.50e-14 73.9
MS.gene22701.t1 MTR_8g081020 32.278 158 100 5 37 193 77 228 8.50e-14 73.9
MS.gene22701.t1 MTR_8g081020 32.278 158 100 5 37 193 153 304 8.50e-14 73.9
MS.gene22701.t1 MTR_8g081020 32.278 158 100 5 37 193 229 380 8.50e-14 73.9
MS.gene22701.t1 MTR_4g080797 32.278 158 100 5 37 193 1 152 8.65e-14 73.9
MS.gene22701.t1 MTR_4g080797 32.278 158 100 5 37 193 77 228 8.65e-14 73.9
MS.gene22701.t1 MTR_4g080797 32.278 158 100 5 37 193 153 304 8.65e-14 73.9
MS.gene22701.t1 MTR_4g080797 32.278 158 100 5 37 193 229 380 8.65e-14 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 1 152 8.65e-14 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 77 228 8.65e-14 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 153 304 8.65e-14 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 229 380 8.65e-14 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 1 152 1.19e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 77 228 1.19e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 153 304 1.19e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 229 380 1.19e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 305 456 1.19e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 1 152 1.19e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 77 228 1.19e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 153 304 1.19e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 229 380 1.19e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 305 456 1.19e-13 73.9
MS.gene22701.t1 MTR_4g091580 32.278 158 100 5 37 193 229 380 1.29e-13 73.9
MS.gene22701.t1 MTR_4g091580 32.278 158 100 5 37 193 1 152 1.49e-13 73.9
MS.gene22701.t1 MTR_4g091580 32.278 158 100 5 37 193 77 228 1.49e-13 73.9
MS.gene22701.t1 MTR_4g091580 32.278 158 100 5 37 193 153 304 1.49e-13 73.9
MS.gene22701.t1 MTR_4g091580 32.278 158 100 5 37 193 381 532 1.49e-13 73.9
MS.gene22701.t1 MTR_4g091580 31.646 158 101 5 37 193 305 456 1.43e-12 70.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 1 152 1.60e-13 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 77 228 1.60e-13 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 153 304 1.60e-13 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 229 380 1.60e-13 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 305 456 1.60e-13 73.9
MS.gene22701.t1 MTR_4g081010 32.278 158 100 5 37 193 381 532 1.60e-13 73.9
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 1 152 1.66e-13 73.6
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 77 228 1.66e-13 73.6
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 153 304 1.66e-13 73.6
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 229 380 1.66e-13 73.6
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 305 456 1.66e-13 73.6
MS.gene22701.t1 MTR_8g018230 32.278 158 100 5 37 193 381 532 1.66e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 77 228 2.46e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 153 304 2.46e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 229 380 2.46e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 305 456 2.46e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 381 532 2.46e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 457 608 2.46e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 533 684 2.46e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 609 760 2.46e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 685 836 2.46e-13 73.6
MS.gene22701.t1 MTR_4g088495 32.278 158 100 5 37 193 1 152 2.80e-13 73.6
MS.gene22701.t1 MTR_4g073580 35.398 113 69 3 37 148 1 110 1.18e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22701.t1 AT2G46500 58.784 592 209 8 1 588 1 561 0.0 689
MS.gene22701.t1 AT2G46500 58.784 592 209 8 1 588 1 561 0.0 689
MS.gene22701.t1 AT5G24240 55.338 562 224 8 34 589 30 570 0.0 618
MS.gene22701.t1 AT5G24240 55.338 562 224 8 34 589 30 570 0.0 618
MS.gene22701.t1 AT2G46500 52.009 423 169 7 1 419 1 393 4.40e-143 421
MS.gene22701.t1 AT2G03890 38.739 333 168 9 254 566 139 455 4.13e-59 209
MS.gene22701.t1 AT1G13640 39.404 302 146 7 267 547 144 429 4.80e-57 202
MS.gene22701.t1 AT1G13640 39.404 302 146 7 267 547 144 429 4.80e-57 202
MS.gene22701.t1 AT3G56600 36.503 326 174 7 257 562 72 384 1.55e-56 199
MS.gene22701.t1 AT3G56600 36.503 326 174 7 257 562 75 387 1.56e-56 199
MS.gene22701.t1 AT3G56600 36.503 326 174 7 257 562 75 387 1.56e-56 199
MS.gene22701.t1 AT2G40850 36.716 335 177 8 259 572 94 414 9.65e-56 198
MS.gene22701.t1 AT1G26270 38.333 300 152 8 265 547 146 429 1.07e-55 199
MS.gene22701.t1 AT2G03890 41.304 230 104 6 334 547 99 313 6.78e-45 167
MS.gene22701.t1 AT1G27570 30.806 211 128 5 344 543 396 599 2.85e-22 101
MS.gene22701.t1 AT1G27570 30.806 211 128 5 344 543 387 590 3.21e-22 101
MS.gene22701.t1 AT4G05050 32.692 156 98 5 37 191 1 150 1.99e-15 74.3
MS.gene22701.t1 AT4G05320 32.692 156 98 5 37 191 1 150 1.99e-15 74.3
MS.gene22701.t1 AT2G35635 32.692 156 98 5 37 191 1 150 7.95e-15 72.8
MS.gene22701.t1 AT4G05050 32.278 158 100 5 37 193 1 152 1.50e-14 73.9
MS.gene22701.t1 AT4G05050 32.278 158 100 5 37 193 77 228 1.50e-14 73.9
MS.gene22701.t1 AT4G05050 32.278 158 100 5 37 193 1 152 1.50e-14 73.9
MS.gene22701.t1 AT4G05050 32.278 158 100 5 37 193 77 228 1.50e-14 73.9
MS.gene22701.t1 AT4G05050 32.278 158 100 5 37 193 1 152 1.50e-14 73.9
MS.gene22701.t1 AT4G05050 32.278 158 100 5 37 193 77 228 1.50e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 1 152 1.50e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 77 228 1.50e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 1 152 1.50e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 77 228 1.50e-14 73.9
MS.gene22701.t1 AT1G31340 32.692 156 98 5 37 191 1 150 1.70e-14 71.6
MS.gene22701.t1 AT5G03240 32.278 158 100 5 37 193 1 152 4.46e-14 73.9
MS.gene22701.t1 AT5G03240 32.278 158 100 5 37 193 77 228 4.46e-14 73.9
MS.gene22701.t1 AT5G03240 32.278 158 100 5 37 193 153 304 4.46e-14 73.9
MS.gene22701.t1 AT5G03240 32.278 158 100 5 37 193 1 152 4.46e-14 73.9
MS.gene22701.t1 AT5G03240 32.278 158 100 5 37 193 77 228 4.46e-14 73.9
MS.gene22701.t1 AT5G03240 32.278 158 100 5 37 193 153 304 4.46e-14 73.9
MS.gene22701.t1 AT5G03240 32.278 158 100 5 37 193 1 152 4.46e-14 73.9
MS.gene22701.t1 AT5G03240 32.278 158 100 5 37 193 77 228 4.46e-14 73.9
MS.gene22701.t1 AT5G03240 32.278 158 100 5 37 193 153 304 4.46e-14 73.9
MS.gene22701.t1 AT5G20620 32.278 158 100 5 37 193 1 152 4.46e-14 73.9
MS.gene22701.t1 AT5G20620 32.278 158 100 5 37 193 77 228 4.46e-14 73.9
MS.gene22701.t1 AT5G20620 32.278 158 100 5 37 193 153 304 4.46e-14 73.9
MS.gene22701.t1 AT1G55060 32.278 158 100 5 37 193 1 152 4.66e-14 72.4
MS.gene22701.t1 AT1G55060 30.233 172 103 5 33 193 63 228 5.22e-14 72.4
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 1 152 4.66e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 77 228 4.66e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 153 304 4.66e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 1 152 4.66e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 77 228 4.66e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 153 304 4.66e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 1 152 4.66e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 77 228 4.66e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 153 304 4.66e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 1 152 4.66e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 77 228 4.66e-14 73.9
MS.gene22701.t1 AT4G02890 32.278 158 100 5 37 193 153 304 4.66e-14 73.9
MS.gene22701.t1 AT1G65350 32.911 158 98 5 37 193 1 151 5.42e-14 73.9
MS.gene22701.t1 AT1G65350 29.747 158 103 5 37 193 77 227 5.90e-12 67.8
MS.gene22701.t1 AT3G43950 34.815 135 79 4 347 478 78 206 7.98e-14 71.6
MS.gene22701.t1 AT5G20620 32.278 158 100 5 37 193 1 152 8.80e-14 73.9
MS.gene22701.t1 AT5G20620 32.278 158 100 5 37 193 77 228 8.80e-14 73.9
MS.gene22701.t1 AT5G20620 32.278 158 100 5 37 193 153 304 8.80e-14 73.9
MS.gene22701.t1 AT5G20620 32.278 158 100 5 37 193 229 380 8.80e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 1 152 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 77 228 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 153 304 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 229 380 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 1 152 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 77 228 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 153 304 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 229 380 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 1 152 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 77 228 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 153 304 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 229 380 9.06e-14 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 1 152 1.24e-13 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 77 228 1.24e-13 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 153 304 1.24e-13 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 229 380 1.24e-13 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 305 456 1.24e-13 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 1 152 1.24e-13 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 77 228 1.24e-13 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 153 304 1.24e-13 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 229 380 1.24e-13 73.9
MS.gene22701.t1 AT4G05320 32.278 158 100 5 37 193 305 456 1.24e-13 73.9
MS.gene22701.t1 AT5G37640 30.120 166 104 5 52 211 19 178 2.95e-12 68.6
MS.gene22701.t1 AT5G37640 30.675 163 105 6 29 189 70 226 3.46e-11 65.5
MS.gene22701.t1 AT5G37640 30.189 159 105 4 37 194 155 308 4.54e-11 65.1

Find 128 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTGCGACGTCCACTTAT+TGG 0.166902 7.4:-1000179 None:intergenic
AGCTTCAGTGATTCGAAATA+TGG 0.237481 7.4:+999902 MS.gene22701:CDS
TCTCTATCGGGAAGCTTTCT+TGG 0.255627 7.4:-999837 None:intergenic
GGAAGTTGCTGCTTATGTTT+TGG 0.257385 7.4:+1000151 MS.gene22701:CDS
AGTGGACGTCGCAAGTTATT+TGG 0.265630 7.4:+1000185 MS.gene22701:CDS
CAAGCGAAGGATTGCTAAAA+AGG 0.268222 7.4:+999533 MS.gene22701:CDS
TGCATCTGTTTGTTCGAAAA+AGG 0.284524 7.4:+999664 MS.gene22701:CDS
TTCAATATTTCTCTCGTTCT+CGG 0.303158 7.4:+999224 MS.gene22701:CDS
CCGTATTCTGCTGAAACTAT+TGG 0.313231 7.4:+1000963 MS.gene22701:CDS
TATCGGTCCTGGGGCTTTCC+CGG 0.316239 7.4:+1000346 MS.gene22701:CDS
CAGAATACGGCTGGCGAGCT+TGG 0.326056 7.4:-1000950 None:intergenic
GATACTCTACTTAAGGATTA+TGG 0.332495 7.4:+999384 MS.gene22701:CDS
CCTTCACCGTCTAATGATAA+TGG 0.336135 7.4:-1000089 None:intergenic
AGAATACGGCTGGCGAGCTT+GGG 0.336231 7.4:-1000949 None:intergenic
GCATTTGAGTCTGTTCTTCC+TGG 0.336546 7.4:+1001197 MS.gene22701:CDS
AAGACAAGTGAGATGGTAAA+TGG 0.339437 7.4:-999185 None:intergenic
AGCAGGAACTTGTGTGTAAT+GGG 0.346405 7.4:+999580 MS.gene22701:CDS
AGCTGTGAAGATATCGGTCC+TGG 0.357604 7.4:+1000335 MS.gene22701:CDS
ATCAATGTCAAAACATCTTC+GGG 0.363524 7.4:+999462 MS.gene22701:CDS
TACTTTATGCTTGATTCAAC+TGG 0.367790 7.4:+999996 MS.gene22701:CDS
GGACAATGACCAGTCTGTTC+TGG 0.368416 7.4:+1000457 MS.gene22701:CDS
TAACCATCCAGGAGACTTGA+TGG 0.377723 7.4:+1000271 MS.gene22701:CDS
ATGGAAGACTCTCACACCTT+TGG 0.377727 7.4:-999308 None:intergenic
CGTATTCTGCTGAAACTATT+GGG 0.383361 7.4:+1000964 MS.gene22701:CDS
GTACCTTCTGCAGATCCTAT+TGG 0.386108 7.4:-999963 None:intergenic
CATCAATGTCAAAACATCTT+CGG 0.391195 7.4:+999461 MS.gene22701:CDS
ATCAAGTTTCCAATTGCAAA+AGG 0.400969 7.4:-1001122 None:intergenic
AATTAAATGCTTACACTTGT+GGG 0.404724 7.4:-1000506 None:intergenic
TAGTTGGTCAAGGAGCGTTC+AGG 0.416347 7.4:+1000129 MS.gene22701:CDS
GATGGTAAATGGAATGCATT+TGG 0.428711 7.4:-999174 None:intergenic
TTTAACTAACAAACAGAAGT+TGG 0.431926 7.4:+999332 MS.gene22701:CDS
TGGTGTTCCTCCAACATTGA+TGG 0.433858 7.4:+1000226 MS.gene22701:CDS
TCTTGGCACCGCTCTCTGAA+TGG 0.434707 7.4:-999820 None:intergenic
TCAATATTTCTCTCGTTCTC+GGG 0.438311 7.4:+999225 MS.gene22701:CDS
TCGAAGTGATACTCTACTTA+AGG 0.438824 7.4:+999377 MS.gene22701:CDS
GATGGTCAAGTGCTTGCATA+AGG 0.443223 7.4:+1000244 MS.gene22701:CDS
CAATTGGAAACTTGATGTGC+AGG 0.450882 7.4:+1001129 MS.gene22701:CDS
AGAGTTCGAGCACATTCAAT+TGG 0.454661 7.4:-1001050 None:intergenic
GAACGAGAGAAATATTGAAA+TGG 0.459276 7.4:-999220 None:intergenic
GTTCTGGTTCCAATTGATCA+TGG 0.461509 7.4:+1000473 MS.gene22701:CDS
ATCTTAGCCATCAAGTCTCC+TGG 0.464083 7.4:-1000278 None:intergenic
CTCCAAAAGAAAATCTCTAT+CGG 0.467054 7.4:-999850 None:intergenic
GTTTGATGATCTTGAGGAGC+AGG 0.472677 7.4:+999563 MS.gene22701:CDS
GCTAGCGAATACTATCCAAT+AGG 0.473031 7.4:+999948 MS.gene22701:CDS
TAATGATAATGGAAGACCTC+GGG 0.474414 7.4:-1000078 None:intergenic
TTGAAGAAAGGGGTTGAGAG+AGG 0.478531 7.4:+1001092 MS.gene22701:CDS
CCAATAGTTTCAGCAGAATA+CGG 0.480969 7.4:-1000963 None:intergenic
TCCCATTCCATAACACGAAA+AGG 0.482974 7.4:-999258 None:intergenic
AAATTAAATGCTTACACTTG+TGG 0.484991 7.4:-1000507 None:intergenic
CATAAGGGATTTAACCATCC+AGG 0.485124 7.4:+1000260 MS.gene22701:CDS
AAGCAGTATCCATGATCAAT+TGG 0.485316 7.4:-1000482 None:intergenic
AGTTGGTCAAGGAGCGTTCA+GGG 0.486553 7.4:+1000130 MS.gene22701:CDS
GAACAAGGAATCTGTGATAG+AGG 0.486875 7.4:+1001160 MS.gene22701:CDS
TCAAGTTTCCAATTGCAAAA+GGG 0.487387 7.4:-1001121 None:intergenic
AACCCCTTTCTTCAAAAGCA+TGG 0.489309 7.4:-1001084 None:intergenic
AATGGCTCAGTGGGATCCAC+TGG 0.494737 7.4:-999144 None:intergenic
GGAGACTTGATGGCTAAGAT+TGG 0.495959 7.4:+1000281 MS.gene22701:CDS
ATAGGATCTGCAGAAGGTAC+CGG 0.497760 7.4:+999966 MS.gene22701:CDS
TATCACTTCGAGCGAGTTCA+CGG 0.499648 7.4:-999365 None:intergenic
AGATGCTGTTTCTCAAATCA+TGG 0.499783 7.4:+1001241 MS.gene22701:CDS
TTCTTGTGGAAGAAAATTTG+AGG 0.501544 7.4:+999773 MS.gene22701:CDS
GCAAATGCAGATAGGCATGC+TGG 0.503643 7.4:+1000410 MS.gene22701:CDS
AAACAGAAGTTGGTTTATGC+TGG 0.505699 7.4:+999342 MS.gene22701:CDS
AGTACACAAAATTAGTGTAC+TGG 0.506035 7.4:+1000376 MS.gene22701:CDS
CAAGTTATTTGGTGATGTGA+AGG 0.508171 7.4:+1000196 MS.gene22701:CDS
TCCAAAAGAAAATCTCTATC+GGG 0.509865 7.4:-999849 None:intergenic
GCCATTGGCTCTTCGTCGAT+AGG 0.511038 7.4:-1000044 None:intergenic
TAGTGTACTGGACATAAGAT+TGG 0.513283 7.4:+1000388 MS.gene22701:CDS
GAGAGTTGAAAATCTTATCA+AGG 0.515143 7.4:-1001271 None:intergenic
TAAGATTGGCAAATGCAGAT+AGG 0.515290 7.4:+1000402 MS.gene22701:CDS
CAAGTTTCCAATTGCAAAAG+GGG 0.516578 7.4:-1001120 None:intergenic
CCATTATCATTAGACGGTGA+AGG 0.523513 7.4:+1000089 MS.gene22701:CDS
TAGGATCTGCAGAAGGTACC+GGG 0.527750 7.4:+999967 MS.gene22701:CDS
TGTGGAAGAAAATTTGAGGT+TGG 0.531735 7.4:+999777 MS.gene22701:CDS
GTGTAATGGGGAACGGTTGG+AGG 0.532109 7.4:+999593 MS.gene22701:CDS
AAGTTATTTGGTGATGTGAA+GGG 0.535843 7.4:+1000197 MS.gene22701:CDS
CACCGCTCTCTGAATGGCAT+CGG 0.538669 7.4:-999814 None:intergenic
GCTGTGAAGATATCGGTCCT+GGG 0.539152 7.4:+1000336 MS.gene22701:CDS
GAAACAGTTTGATGATCTTG+AGG 0.541679 7.4:+999557 MS.gene22701:CDS
TCATTTACCGGGAAAGCCCC+AGG 0.542503 7.4:-1000353 None:intergenic
GGAAGAAAATTTGAGGTTGG+TGG 0.542977 7.4:+999780 MS.gene22701:CDS
GAGCAGGAACTTGTGTGTAA+TGG 0.543660 7.4:+999579 MS.gene22701:CDS
AATGTAGCTTCACTTGTGCC+AGG 0.546538 7.4:-1001215 None:intergenic
TATTGGGTACATAAAGTCAC+TGG 0.549010 7.4:+1000980 MS.gene22701:CDS
TAGTTTCAGCAGAATACGGC+TGG 0.549860 7.4:-1000959 None:intergenic
GGAGACAACAATGGCTCAGT+GGG 0.550782 7.4:-999153 None:intergenic
TGAAAATCTTATCAAGGCGC+TGG 0.555048 7.4:-1001265 None:intergenic
ATGGTCAAGTGCTTGCATAA+GGG 0.559797 7.4:+1000245 MS.gene22701:CDS
AATGGGAGCTGTGAAGATAT+CGG 0.559895 7.4:+1000329 MS.gene22701:CDS
GCCTATCGACGAAGAGCCAA+TGG 0.563365 7.4:+1000043 MS.gene22701:CDS
GTTACAATGGACAACTCAAA+GGG 0.565579 7.4:-999708 None:intergenic
TGTCAAAACATCTTCGGGGA+AGG 0.565717 7.4:+999467 MS.gene22701:CDS
AAGGATTATGGAGTAACTGA+TGG 0.571025 7.4:+999396 MS.gene22701:CDS
AGTTACAATGGACAACTCAA+AGG 0.571959 7.4:-999709 None:intergenic
CAAATGCAGATAGGCATGCT+GGG 0.572744 7.4:+1000411 MS.gene22701:CDS
CACTTGACCATCAATGTTGG+AGG 0.573274 7.4:-1000233 None:intergenic
GAATACGGCTGGCGAGCTTG+GGG 0.573463 7.4:-1000948 None:intergenic
TGTGTGTAATGGGGAACGGT+TGG 0.578859 7.4:+999590 MS.gene22701:CDS
AAGCATAAAGTAAGCTCCCC+CGG 0.581274 7.4:-999985 None:intergenic
GTCCATTGTAACTACAGACT+TGG 0.582693 7.4:+999719 MS.gene22701:CDS
TGTTAGTACTCTTAGTCCAG+TGG 0.584156 7.4:+999128 MS.gene22701:CDS
GGTCTTCCATTATCATTAGA+CGG 0.588994 7.4:+1000083 MS.gene22701:CDS
TCCTCAAAAGACAAGTGAGA+TGG 0.590743 7.4:-999192 None:intergenic
AGCCAAGTCTGTAGTTACAA+TGG 0.593929 7.4:-999721 None:intergenic
AAGGGTACAATAGTTGGTCA+AGG 0.598430 7.4:+1000119 MS.gene22701:CDS
TTAGTGAAAATGTCATCTGC+TGG 0.606185 7.4:+999105 None:intergenic
ATGTAAAATACATCAAGCGA+AGG 0.618575 7.4:+999520 MS.gene22701:CDS
ATGGTAAACTCTGCATACGA+TGG 0.619677 7.4:+999921 MS.gene22701:CDS
AAGCACTTGACCATCAATGT+TGG 0.627426 7.4:-1000236 None:intergenic
TACCGATGCCATTCAGAGAG+CGG 0.639607 7.4:+999812 MS.gene22701:CDS
CTGTGAAGATATCGGTCCTG+GGG 0.640174 7.4:+1000337 MS.gene22701:CDS
TAGCCATCAAGTCTCCTGGA+TGG 0.640520 7.4:-1000274 None:intergenic
CTGCAAGCATAATGATGCAG+TGG 0.641116 7.4:+999641 MS.gene22701:CDS
CTAATGATAATGGAAGACCT+CGG 0.646268 7.4:-1000079 None:intergenic
AACTTGTGTGTAATGGGGAA+CGG 0.646813 7.4:+999586 MS.gene22701:CDS
TGGAGACAACAATGGCTCAG+TGG 0.649706 7.4:-999154 None:intergenic
AATTGGAAACTTGATGTGCA+GGG 0.653610 7.4:+1001130 MS.gene22701:CDS
GTGCAGGGAATCATTGAACA+AGG 0.654835 7.4:+1001145 MS.gene22701:CDS
CTGTTAAGTTCAAAATCCAA+AGG 0.656079 7.4:+999292 MS.gene22701:CDS
AATGCATTTGGAGACAACAA+TGG 0.660019 7.4:-999162 None:intergenic
AATGATAATGGAAGACCTCG+GGG 0.661241 7.4:-1000077 None:intergenic
CAATTGGAACCAGAACAGAC+TGG 0.671066 7.4:-1000466 None:intergenic
AGGATCTGCAGAAGGTACCG+GGG 0.678821 7.4:+999968 MS.gene22701:CDS
GCAGGAACTTGTGTGTAATG+GGG 0.680555 7.4:+999581 MS.gene22701:CDS
TATCCAATAGGATCTGCAGA+AGG 0.683129 7.4:+999960 MS.gene22701:CDS
TCAATGTCAAAACATCTTCG+GGG 0.701785 7.4:+999463 MS.gene22701:CDS
GGATCTGCAGAAGGTACCGG+GGG 0.709644 7.4:+999969 MS.gene22701:CDS
ATGATAATGGAAGACCTCGG+GGG 0.745031 7.4:-1000076 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGACTTAAAAAATGAAT+TGG + chr7.4:1000763-1000782 MS.gene22701:intron 15.0%
!!! AACATAATGTTTTCAAATAG+TGG + chr7.4:1000589-1000608 MS.gene22701:intron 20.0%
!!! ATTTTAGGGTTAACTATAAT+TGG - chr7.4:999876-999895 None:intergenic 20.0%
!!! TTCTGTTTGTTAGTTAAAAA+TGG - chr7.4:999330-999349 None:intergenic 20.0%
! AAATTAAATGCTTACACTTG+TGG - chr7.4:1000510-1000529 None:intergenic 25.0%
! AATTAAATGCTTACACTTGT+GGG - chr7.4:1000509-1000528 None:intergenic 25.0%
! ACTTAAAAAATGAATTGGCT+AGG + chr7.4:1000768-1000787 MS.gene22701:intron 25.0%
! AGATGTTTGTGAAAAACAAT+GGG + chr7.4:1000312-1000331 MS.gene22701:CDS 25.0%
! TGTATTGAAATAATGAAGTC+TGG + chr7.4:1000809-1000828 MS.gene22701:intron 25.0%
! TTTAACTAACAAACAGAAGT+TGG + chr7.4:999332-999351 MS.gene22701:CDS 25.0%
! TTTGTGCAATCTACAATATA+TGG + chr7.4:1000727-1000746 MS.gene22701:intron 25.0%
!! ATTTTGTGTACTTCATTTAC+CGG - chr7.4:1000368-1000387 None:intergenic 25.0%
!! TTAAAAAAGGGTACAATAGT+TGG + chr7.4:1000113-1000132 MS.gene22701:CDS 25.0%
!! TTGAAGATTGTACTTTTGAA+TGG + chr7.4:1000916-1000935 MS.gene22701:CDS 25.0%
!! TTTTCAAATAGTGGTTATAG+CGG + chr7.4:1000598-1000617 MS.gene22701:intron 25.0%
!!! GATGTTTTTGAAAATTCTTG+TGG + chr7.4:999759-999778 MS.gene22701:CDS 25.0%
AGTACACAAAATTAGTGTAC+TGG + chr7.4:1000376-1000395 MS.gene22701:CDS 30.0%
ATCAAGTTTCCAATTGCAAA+AGG - chr7.4:1001125-1001144 None:intergenic 30.0%
ATCAATGTCAAAACATCTTC+GGG + chr7.4:999462-999481 MS.gene22701:CDS 30.0%
ATGTAAAATACATCAAGCGA+AGG + chr7.4:999520-999539 MS.gene22701:CDS 30.0%
CAGATGTTTGTGAAAAACAA+TGG + chr7.4:1000311-1000330 MS.gene22701:CDS 30.0%
CATCAATGTCAAAACATCTT+CGG + chr7.4:999461-999480 MS.gene22701:CDS 30.0%
CTCCAAAAGAAAATCTCTAT+CGG - chr7.4:999853-999872 None:intergenic 30.0%
CTGTTAAGTTCAAAATCCAA+AGG + chr7.4:999292-999311 MS.gene22701:CDS 30.0%
GAACGAGAGAAATATTGAAA+TGG - chr7.4:999223-999242 None:intergenic 30.0%
GAGAGTTGAAAATCTTATCA+AGG - chr7.4:1001274-1001293 None:intergenic 30.0%
GATACTCTACTTAAGGATTA+TGG + chr7.4:999384-999403 MS.gene22701:CDS 30.0%
TACTTTATGCTTGATTCAAC+TGG + chr7.4:999996-1000015 MS.gene22701:CDS 30.0%
TCAAGTTTCCAATTGCAAAA+GGG - chr7.4:1001124-1001143 None:intergenic 30.0%
TCCAAAAGAAAATCTCTATC+GGG - chr7.4:999852-999871 None:intergenic 30.0%
TTCAATATTTCTCTCGTTCT+CGG + chr7.4:999224-999243 MS.gene22701:CDS 30.0%
TTCTTGTGGAAGAAAATTTG+AGG + chr7.4:999773-999792 MS.gene22701:CDS 30.0%
TTGAAATAATGAAGTCTGGT+TGG + chr7.4:1000813-1000832 MS.gene22701:intron 30.0%
! ACTGAAGCTAACTCAATTTT+AGG - chr7.4:999891-999910 None:intergenic 30.0%
! CTGAAGCTAACTCAATTTTA+GGG - chr7.4:999890-999909 None:intergenic 30.0%
! TTTTGTGTACTTCATTTACC+GGG - chr7.4:1000367-1000386 None:intergenic 30.0%
!! AAGTTATTTGGTGATGTGAA+GGG + chr7.4:1000197-1000216 MS.gene22701:CDS 30.0%
!!! ACTTTTGAAGTTTCATGGAT+GGG + chr7.4:1001022-1001041 MS.gene22701:CDS 30.0%
!!! ATTGCACTTTTGAAGTTTCA+TGG + chr7.4:1001017-1001036 MS.gene22701:CDS 30.0%
AAGACAAGTGAGATGGTAAA+TGG - chr7.4:999188-999207 None:intergenic 35.0%
AAGCAGTATCCATGATCAAT+TGG - chr7.4:1000485-1000504 None:intergenic 35.0%
AAGGATTATGGAGTAACTGA+TGG + chr7.4:999396-999415 MS.gene22701:CDS 35.0%
AATGCATTTGGAGACAACAA+TGG - chr7.4:999165-999184 None:intergenic 35.0%
AATTGGAAACTTGATGTGCA+GGG + chr7.4:1001130-1001149 MS.gene22701:CDS 35.0%
ACATAGAAGAATTGCCACAT+CGG - chr7.4:1000691-1000710 None:intergenic 35.0%
AGCAACAACTGTTAAACGAT+TGG - chr7.4:1000885-1000904 None:intergenic 35.0%
AGCTTCAGTGATTCGAAATA+TGG + chr7.4:999902-999921 MS.gene22701:CDS 35.0%
AGTTACAATGGACAACTCAA+AGG - chr7.4:999712-999731 None:intergenic 35.0%
CAAGTTTCCAATTGCAAAAG+GGG - chr7.4:1001123-1001142 None:intergenic 35.0%
CCAATAGTTTCAGCAGAATA+CGG - chr7.4:1000966-1000985 None:intergenic 35.0%
CGTATTCTGCTGAAACTATT+GGG + chr7.4:1000964-1000983 MS.gene22701:CDS 35.0%
GATGGTAAATGGAATGCATT+TGG - chr7.4:999177-999196 None:intergenic 35.0%
GGTCTTCCATTATCATTAGA+CGG + chr7.4:1000083-1000102 MS.gene22701:CDS 35.0%
GTGTTGTCAATTGCAAATGA+TGG - chr7.4:1000669-1000688 None:intergenic 35.0%
GTTACAATGGACAACTCAAA+GGG - chr7.4:999711-999730 None:intergenic 35.0%
TAAGATTGGCAAATGCAGAT+AGG + chr7.4:1000402-1000421 MS.gene22701:CDS 35.0%
TAGTGTACTGGACATAAGAT+TGG + chr7.4:1000388-1000407 MS.gene22701:CDS 35.0%
TATTGGGTACATAAAGTCAC+TGG + chr7.4:1000980-1000999 MS.gene22701:CDS 35.0%
TCAATATTTCTCTCGTTCTC+GGG + chr7.4:999225-999244 MS.gene22701:CDS 35.0%
TCAATGTCAAAACATCTTCG+GGG + chr7.4:999463-999482 MS.gene22701:CDS 35.0%
TCGAAGTGATACTCTACTTA+AGG + chr7.4:999377-999396 MS.gene22701:CDS 35.0%
TGCATCTGTTTGTTCGAAAA+AGG + chr7.4:999664-999683 MS.gene22701:CDS 35.0%
! AAACAGAAGTTGGTTTATGC+TGG + chr7.4:999342-999361 MS.gene22701:CDS 35.0%
! GAAACAGTTTGATGATCTTG+AGG + chr7.4:999557-999576 MS.gene22701:CDS 35.0%
! GTTTTTCACAAACATCTGCA+TGG - chr7.4:1000309-1000328 None:intergenic 35.0%
! TCCCGATAGAGATTTTCTTT+TGG + chr7.4:999848-999867 MS.gene22701:CDS 35.0%
! TCCTTTTCGTGTTATGGAAT+GGG + chr7.4:999257-999276 MS.gene22701:CDS 35.0%
! TGTGGAAGAAAATTTGAGGT+TGG + chr7.4:999777-999796 MS.gene22701:CDS 35.0%
!! AACCATGCTTTTGAAGAAAG+GGG + chr7.4:1001082-1001101 MS.gene22701:CDS 35.0%
!! AGATGCTGTTTCTCAAATCA+TGG + chr7.4:1001241-1001260 MS.gene22701:CDS 35.0%
!! CAACCATGCTTTTGAAGAAA+GGG + chr7.4:1001081-1001100 MS.gene22701:CDS 35.0%
!! CAAGTTATTTGGTGATGTGA+AGG + chr7.4:1000196-1000215 MS.gene22701:CDS 35.0%
!! CTAATGATAATGGAAGACCT+CGG - chr7.4:1000082-1000101 None:intergenic 35.0%
!! GTACTTTTGAATGGCTTTAC+TGG + chr7.4:1000925-1000944 MS.gene22701:CDS 35.0%
!! GTTTTGGATCATCCAATAAG+TGG + chr7.4:1000167-1000186 MS.gene22701:CDS 35.0%
!! TAATGATAATGGAAGACCTC+GGG - chr7.4:1000081-1000100 None:intergenic 35.0%
!! TCAACCATGCTTTTGAAGAA+AGG + chr7.4:1001080-1001099 MS.gene22701:CDS 35.0%
!!! CACTTTTGAAGTTTCATGGA+TGG + chr7.4:1001021-1001040 MS.gene22701:CDS 35.0%
!!! GAATATTTTGATCAGCACAG+TGG + chr7.4:1000433-1000452 MS.gene22701:CDS 35.0%
AACCCCTTTCTTCAAAAGCA+TGG - chr7.4:1001087-1001106 None:intergenic 40.0%
AAGCACTTGACCATCAATGT+TGG - chr7.4:1000239-1000258 None:intergenic 40.0%
AATGGGAGCTGTGAAGATAT+CGG + chr7.4:1000329-1000348 MS.gene22701:CDS 40.0%
AGACGGTGAAGGCTTAAAAA+AGG + chr7.4:1000100-1000119 MS.gene22701:CDS 40.0%
AGAGTTCGAGCACATTCAAT+TGG - chr7.4:1001053-1001072 None:intergenic 40.0%
AGCAGGAACTTGTGTGTAAT+GGG + chr7.4:999580-999599 MS.gene22701:CDS 40.0%
AGCCAAGTCTGTAGTTACAA+TGG - chr7.4:999724-999743 None:intergenic 40.0%
ATGGTAAACTCTGCATACGA+TGG + chr7.4:999921-999940 MS.gene22701:CDS 40.0%
ATGGTCAAGTGCTTGCATAA+GGG + chr7.4:1000245-1000264 MS.gene22701:CDS 40.0%
CAAGCGAAGGATTGCTAAAA+AGG + chr7.4:999533-999552 MS.gene22701:CDS 40.0%
CAATTGGAAACTTGATGTGC+AGG + chr7.4:1001129-1001148 MS.gene22701:CDS 40.0%
CATAAGGGATTTAACCATCC+AGG + chr7.4:1000260-1000279 MS.gene22701:CDS 40.0%
CCATTATCATTAGACGGTGA+AGG + chr7.4:1000089-1000108 MS.gene22701:CDS 40.0%
CCGTATTCTGCTGAAACTAT+TGG + chr7.4:1000963-1000982 MS.gene22701:CDS 40.0%
CCTTCACCGTCTAATGATAA+TGG - chr7.4:1000092-1000111 None:intergenic 40.0%
GAACAAGGAATCTGTGATAG+AGG + chr7.4:1001160-1001179 MS.gene22701:CDS 40.0%
GACGGTGAAGGCTTAAAAAA+GGG + chr7.4:1000101-1000120 MS.gene22701:CDS 40.0%
GCTAGCGAATACTATCCAAT+AGG + chr7.4:999948-999967 MS.gene22701:CDS 40.0%
GTCCATTGTAACTACAGACT+TGG + chr7.4:999719-999738 MS.gene22701:CDS 40.0%
TATCCAATAGGATCTGCAGA+AGG + chr7.4:999960-999979 MS.gene22701:CDS 40.0%
TCCCATTCCATAACACGAAA+AGG - chr7.4:999261-999280 None:intergenic 40.0%
TCCTCAAAAGACAAGTGAGA+TGG - chr7.4:999195-999214 None:intergenic 40.0%
TGAAAATCTTATCAAGGCGC+TGG - chr7.4:1001268-1001287 None:intergenic 40.0%
TGTTAGTACTCTTAGTCCAG+TGG + chr7.4:999128-999147 MS.gene22701:CDS 40.0%
! AACTTGTGTGTAATGGGGAA+CGG + chr7.4:999586-999605 MS.gene22701:CDS 40.0%
! AAGGGTACAATAGTTGGTCA+AGG + chr7.4:1000119-1000138 MS.gene22701:CDS 40.0%
! ACCATCTCACTTGTCTTTTG+AGG + chr7.4:999191-999210 MS.gene22701:CDS 40.0%
! CTCCTTTTCGTGTTATGGAA+TGG + chr7.4:999256-999275 MS.gene22701:CDS 40.0%
! GGAAGAAAATTTGAGGTTGG+TGG + chr7.4:999780-999799 MS.gene22701:CDS 40.0%
! GGGGAAGGAATTTTCTTTTC+AGG + chr7.4:999482-999501 MS.gene22701:CDS 40.0%
!! AATGATAATGGAAGACCTCG+GGG - chr7.4:1000080-1000099 None:intergenic 40.0%
!! GGAAGTTGCTGCTTATGTTT+TGG + chr7.4:1000151-1000170 MS.gene22701:CDS 40.0%
!! GTTCTGGTTCCAATTGATCA+TGG + chr7.4:1000473-1000492 MS.gene22701:CDS 40.0%
!! GTTGACTCCTTTTCGTGTTA+TGG + chr7.4:999251-999270 MS.gene22701:CDS 40.0%
!!! TATTTTGATCAGCACAGTGG+AGG + chr7.4:1000436-1000455 MS.gene22701:CDS 40.0%
!!! TTTTCTTTTCAGGTCGAACG+AGG + chr7.4:999492-999511 MS.gene22701:CDS 40.0%
AACTTGCGACGTCCACTTAT+TGG - chr7.4:1000182-1000201 None:intergenic 45.0%
AAGCATAAAGTAAGCTCCCC+CGG - chr7.4:999988-1000007 None:intergenic 45.0%
AATGTAGCTTCACTTGTGCC+AGG - chr7.4:1001218-1001237 None:intergenic 45.0%
AGTGGACGTCGCAAGTTATT+TGG + chr7.4:1000185-1000204 MS.gene22701:CDS 45.0%
ATCTTAGCCATCAAGTCTCC+TGG - chr7.4:1000281-1000300 None:intergenic 45.0%
ATGGAAGACTCTCACACCTT+TGG - chr7.4:999311-999330 None:intergenic 45.0%
CAAATGCAGATAGGCATGCT+GGG + chr7.4:1000411-1000430 MS.gene22701:CDS 45.0%
CAATTGGAACCAGAACAGAC+TGG - chr7.4:1000469-1000488 None:intergenic 45.0%
CACTTGACCATCAATGTTGG+AGG - chr7.4:1000236-1000255 None:intergenic 45.0%
CTGCAAGCATAATGATGCAG+TGG + chr7.4:999641-999660 MS.gene22701:CDS 45.0%
GAGCAGGAACTTGTGTGTAA+TGG + chr7.4:999579-999598 MS.gene22701:CDS 45.0%
GATGGTCAAGTGCTTGCATA+AGG + chr7.4:1000244-1000263 MS.gene22701:CDS 45.0%
GCAGGAACTTGTGTGTAATG+GGG + chr7.4:999581-999600 MS.gene22701:CDS 45.0%
GCATTTGAGTCTGTTCTTCC+TGG + chr7.4:1001197-1001216 MS.gene22701:CDS 45.0%
GTACCTTCTGCAGATCCTAT+TGG - chr7.4:999966-999985 None:intergenic 45.0%
GTGCAGGGAATCATTGAACA+AGG + chr7.4:1001145-1001164 MS.gene22701:CDS 45.0%
TAACCATCCAGGAGACTTGA+TGG + chr7.4:1000271-1000290 MS.gene22701:CDS 45.0%
TAGTTTCAGCAGAATACGGC+TGG - chr7.4:1000962-1000981 None:intergenic 45.0%
TATCACTTCGAGCGAGTTCA+CGG - chr7.4:999368-999387 None:intergenic 45.0%
TCTCTATCGGGAAGCTTTCT+TGG - chr7.4:999840-999859 None:intergenic 45.0%
TGCAATTGACAACACCGATG+TGG + chr7.4:1000674-1000693 MS.gene22701:intron 45.0%
TGGTGTTCCTCCAACATTGA+TGG + chr7.4:1000226-1000245 MS.gene22701:CDS 45.0%
TGTCAAAACATCTTCGGGGA+AGG + chr7.4:999467-999486 MS.gene22701:CDS 45.0%
TTGAAGAAAGGGGTTGAGAG+AGG + chr7.4:1001092-1001111 MS.gene22701:CDS 45.0%
! ATAGGATCTGCAGAAGGTAC+CGG + chr7.4:999966-999985 MS.gene22701:CDS 45.0%
! GGAGACTTGATGGCTAAGAT+TGG + chr7.4:1000281-1000300 MS.gene22701:CDS 45.0%
! GGATTGACCCCTTTTGCAAT+TGG + chr7.4:1001113-1001132 MS.gene22701:CDS 45.0%
! GTTTGATGATCTTGAGGAGC+AGG + chr7.4:999563-999582 MS.gene22701:CDS 45.0%
!! ATGATAATGGAAGACCTCGG+GGG - chr7.4:1000079-1000098 None:intergenic 45.0%
!!! TTTTCAGGTCGAACGAGGTA+GGG + chr7.4:999497-999516 MS.gene22701:CDS 45.0%
AGCTGTGAAGATATCGGTCC+TGG + chr7.4:1000335-1000354 MS.gene22701:CDS 50.0%
CTGTGAAGATATCGGTCCTG+GGG + chr7.4:1000337-1000356 MS.gene22701:CDS 50.0%
GCAAATGCAGATAGGCATGC+TGG + chr7.4:1000410-1000429 MS.gene22701:CDS 50.0%
GCTGTGAAGATATCGGTCCT+GGG + chr7.4:1000336-1000355 MS.gene22701:CDS 50.0%
GGACAATGACCAGTCTGTTC+TGG + chr7.4:1000457-1000476 MS.gene22701:CDS 50.0%
GGAGACAACAATGGCTCAGT+GGG - chr7.4:999156-999175 None:intergenic 50.0%
TACCGATGCCATTCAGAGAG+CGG + chr7.4:999812-999831 MS.gene22701:CDS 50.0%
TAGCCATCAAGTCTCCTGGA+TGG - chr7.4:1000277-1000296 None:intergenic 50.0%
TGGAGACAACAATGGCTCAG+TGG - chr7.4:999157-999176 None:intergenic 50.0%
! GGTGATGTGAAGGGTTTTGC+TGG + chr7.4:1000206-1000225 MS.gene22701:CDS 50.0%
! TGTGTGTAATGGGGAACGGT+TGG + chr7.4:999590-999609 MS.gene22701:CDS 50.0%
!! AGTTGGTCAAGGAGCGTTCA+GGG + chr7.4:1000130-1000149 MS.gene22701:CDS 50.0%
!! TAGGATCTGCAGAAGGTACC+GGG + chr7.4:999967-999986 MS.gene22701:CDS 50.0%
!! TAGTTGGTCAAGGAGCGTTC+AGG + chr7.4:1000129-1000148 MS.gene22701:CDS 50.0%
!!! CTTTTCAGGTCGAACGAGGT+AGG + chr7.4:999496-999515 MS.gene22701:CDS 50.0%
AATGGCTCAGTGGGATCCAC+TGG - chr7.4:999147-999166 None:intergenic 55.0%
AGAATACGGCTGGCGAGCTT+GGG - chr7.4:1000952-1000971 None:intergenic 55.0%
ATGGCTGTGAATAACCCCCG+AGG + chr7.4:1000062-1000081 MS.gene22701:CDS 55.0%
CACCGCTCTCTGAATGGCAT+CGG - chr7.4:999817-999836 None:intergenic 55.0%
CGGGGGTTATTCACAGCCAT+TGG - chr7.4:1000062-1000081 None:intergenic 55.0%
GCCTATCGACGAAGAGCCAA+TGG + chr7.4:1000043-1000062 MS.gene22701:CDS 55.0%
TCATTTACCGGGAAAGCCCC+AGG - chr7.4:1000356-1000375 None:intergenic 55.0%
TCTTGGCACCGCTCTCTGAA+TGG - chr7.4:999823-999842 None:intergenic 55.0%
! GTGTAATGGGGAACGGTTGG+AGG + chr7.4:999593-999612 MS.gene22701:CDS 55.0%
!! AGGATCTGCAGAAGGTACCG+GGG + chr7.4:999968-999987 MS.gene22701:CDS 55.0%
!! GCCATTGGCTCTTCGTCGAT+AGG - chr7.4:1000047-1000066 None:intergenic 55.0%
CAGAATACGGCTGGCGAGCT+TGG - chr7.4:1000953-1000972 None:intergenic 60.0%
GAATACGGCTGGCGAGCTTG+GGG - chr7.4:1000951-1000970 None:intergenic 60.0%
TATCGGTCCTGGGGCTTTCC+CGG + chr7.4:1000346-1000365 MS.gene22701:CDS 60.0%
!! GGATCTGCAGAAGGTACCGG+GGG + chr7.4:999969-999988 MS.gene22701:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 999114 1001301 999114 ID=MS.gene22701
chr7.4 mRNA 999114 1001301 999114 ID=MS.gene22701.t1;Parent=MS.gene22701
chr7.4 exon 999114 1000514 999114 ID=MS.gene22701.t1.exon1;Parent=MS.gene22701.t1
chr7.4 CDS 999114 1000514 999114 ID=cds.MS.gene22701.t1;Parent=MS.gene22701.t1
chr7.4 exon 1000915 1001301 1000915 ID=MS.gene22701.t1.exon2;Parent=MS.gene22701.t1
chr7.4 CDS 1000915 1001301 1000915 ID=cds.MS.gene22701.t1;Parent=MS.gene22701.t1
Gene Sequence

>MS.gene22701

ATGTCATCTGCTGGTGTTAGTACTCTTAGTCCAGTGGATCCCACTGAGCCATTGTTGTCTCCAAATGCATTCCATTTACCATCTCACTTGTCTTTTGAGGACAAATCCATTTCAATATTTCTCTCGTTCTCGGGTTCGTTGACTCCTTTTCGTGTTATGGAATGGGATACTATTGAGTCTGTTAAGTTCAAAATCCAAAGGTGTGAGAGTCTTCCATTTTTAACTAACAAACAGAAGTTGGTTTATGCTGGCCGTGAACTCGCTCGAAGTGATACTCTACTTAAGGATTATGGAGTAACTGATGGAAATGTTTTGCATTTGATAATCAAATTATCAGATCTTCAACTCATCAATGTCAAAACATCTTCGGGGAAGGAATTTTCTTTTCAGGTCGAACGAGGTAGGGATGTAAAATACATCAAGCGAAGGATTGCTAAAAAGGAGAAACAGTTTGATGATCTTGAGGAGCAGGAACTTGTGTGTAATGGGGAACGGTTGGAGGATCAGAAGCTTATTGATGACATCTGCTGCAAGCATAATGATGCAGTGGTGCATCTGTTTGTTCGAAAAAGGAATGCAAAAGTTCATAGAAGACCCTTTGAGTTGTCCATTGTAACTACAGACTTGGCTGATACGAAAACTGACGATGTTTTTGAAAATTCTTGTGGAAGAAAATTTGAGGTTGGTGGTGTAGAAGATACCGATGCCATTCAGAGAGCGGTGCCAAGAAAGCTTCCCGATAGAGATTTTCTTTTGGAGCCAATTATAGTTAACCCTAAAATTGAGTTAGCTTCAGTGATTCGAAATATGGTAAACTCTGCATACGATGGACTAGCTAGCGAATACTATCCAATAGGATCTGCAGAAGGTACCGGGGGAGCTTACTTTATGCTTGATTCAACTGGTCAGAAGTATGTGTCTGTTTTTAAGCCTATCGACGAAGAGCCAATGGCTGTGAATAACCCCCGAGGTCTTCCATTATCATTAGACGGTGAAGGCTTAAAAAAGGGTACAATAGTTGGTCAAGGAGCGTTCAGGGAAGTTGCTGCTTATGTTTTGGATCATCCAATAAGTGGACGTCGCAAGTTATTTGGTGATGTGAAGGGTTTTGCTGGTGTTCCTCCAACATTGATGGTCAAGTGCTTGCATAAGGGATTTAACCATCCAGGAGACTTGATGGCTAAGATTGGATCCATGCAGATGTTTGTGAAAAACAATGGGAGCTGTGAAGATATCGGTCCTGGGGCTTTCCCGGTAAATGAAGTACACAAAATTAGTGTACTGGACATAAGATTGGCAAATGCAGATAGGCATGCTGGGAATATTTTGATCAGCACAGTGGAGGACAATGACCAGTCTGTTCTGGTTCCAATTGATCATGGATACTGCTTGCCCACAAGTGTAAGCATTTAATTTTATGTTCTCTTTGTTGTTTTTAATGCATTTGATGCAGTATTGTTATAGAAATATAGCTAAACATAATGTTTTCAAATAGTGGTTATAGCGGCGCTATAGCAATGTTGTATAGCGAAATTTGAACAAACGCTATTTTCCATCATTTGCAATTGACAACACCGATGTGGCAATTCTTCTATGTTATATTTTTGCTTTCATTTGTGCAATCTACAATATATGGAATCAAATTATATTTATGACTTAAAAAATGAATTGGCTAGGATTGCAATTAGATTTATGTGTATTGAAATAATGAAGTCTGGTTGGCATACAAGTAGACATAGATTGTAGACGTAGTTGAGTTTTGTTTAAACCAATCGTTTAACAGTTGTTGCTATTCTGACAGTTTGAAGATTGTACTTTTGAATGGCTTTACTGGCCCCAAGCTCGCCAGCCGTATTCTGCTGAAACTATTGGGTACATAAAGTCACTGGATGCTGAAGAAGATATTGCACTTTTGAAGTTTCATGGATGGGATCTGCCAATTGAATGTGCTCGAACTCTTAGAATCTCAACCATGCTTTTGAAGAAAGGGGTTGAGAGAGGATTGACCCCTTTTGCAATTGGAAACTTGATGTGCAGGGAATCATTGAACAAGGAATCTGTGATAGAGGAAATAGTTGAAGAAGCATTTGAGTCTGTTCTTCCTGGCACAAGTGAAGCTACATTGCTAGATGCTGTTTCTCAAATCATGGACCAGCGCCTTGATAAGATTTTCAACTCTCTTTTTTAA

Protein sequence

>MS.gene22701.t1

MSSAGVSTLSPVDPTEPLLSPNAFHLPSHLSFEDKSISIFLSFSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKRNAKVHRRPFELSIVTTDLADTKTDDVFENSCGRKFEVGGVEDTDAIQRAVPRKLPDRDFLLEPIIVNPKIELASVIRNMVNSAYDGLASEYYPIGSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTIVGQGAFREVAAYVLDHPISGRRKLFGDVKGFAGVPPTLMVKCLHKGFNHPGDLMAKIGSMQMFVKNNGSCEDIGPGAFPVNEVHKISVLDIRLANADRHAGNILISTVEDNDQSVLVPIDHGYCLPTSFEDCTFEWLYWPQARQPYSAETIGYIKSLDAEEDIALLKFHGWDLPIECARTLRISTMLLKKGVERGLTPFAIGNLMCRESLNKESVIEEIVEEAFESVLPGTSEATLLDAVSQIMDQRLDKIFNSLF