Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22701.t1 | XP_013450605.1 | 99.2 | 595 | 5 | 0 | 1 | 595 | 1 | 595 | 0.00E+00 | 1185.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22701.t1 | Q9ZPY9 | 59.5 | 592 | 205 | 10 | 1 | 588 | 1 | 561 | 4.2e-192 | 672.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22701.t1 | A0A072U655 | 99.2 | 595 | 5 | 0 | 1 | 595 | 1 | 595 | 0.0e+00 | 1185.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050651 | MS.gene22701 | 0.970757 | 4.19E-132 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22701.t1 | MTR_7g117395 | 99.160 | 595 | 5 | 0 | 1 | 595 | 1 | 595 | 0.0 | 1215 |
MS.gene22701.t1 | MTR_8g027610 | 70.687 | 597 | 161 | 5 | 1 | 590 | 1 | 590 | 0.0 | 847 |
MS.gene22701.t1 | MTR_3g091400 | 57.143 | 567 | 220 | 7 | 35 | 591 | 25 | 578 | 0.0 | 642 |
MS.gene22701.t1 | MTR_8g099565 | 57.867 | 572 | 216 | 9 | 37 | 590 | 27 | 591 | 0.0 | 640 |
MS.gene22701.t1 | MTR_5g009120 | 55.652 | 575 | 225 | 10 | 29 | 590 | 23 | 580 | 0.0 | 630 |
MS.gene22701.t1 | MTR_8g066090 | 39.189 | 296 | 150 | 6 | 266 | 547 | 146 | 425 | 2.87e-59 | 209 |
MS.gene22701.t1 | MTR_0009s0120 | 40.000 | 300 | 146 | 7 | 266 | 547 | 148 | 431 | 8.56e-59 | 207 |
MS.gene22701.t1 | MTR_7g017360 | 40.214 | 281 | 135 | 8 | 284 | 547 | 162 | 426 | 6.51e-55 | 197 |
MS.gene22701.t1 | MTR_1g066390 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.33e-14 | 73.9 |
MS.gene22701.t1 | MTR_1g066390 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.33e-14 | 73.9 |
MS.gene22701.t1 | MTR_7g116360 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.43e-14 | 73.9 |
MS.gene22701.t1 | MTR_7g116360 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.43e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g080920 | 31.646 | 158 | 101 | 5 | 37 | 193 | 1 | 152 | 1.60e-14 | 73.6 |
MS.gene22701.t1 | MTR_6g061930 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 3.15e-14 | 73.9 |
MS.gene22701.t1 | MTR_6g061930 | 30.380 | 158 | 88 | 5 | 37 | 193 | 77 | 213 | 3.67e-12 | 67.8 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 3.17e-14 | 73.6 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 3.17e-14 | 73.6 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.03e-14 | 73.6 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.03e-14 | 73.6 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.45e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.45e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 4.45e-14 | 73.9 |
MS.gene22701.t1 | MTR_5g092700 | 34.074 | 135 | 83 | 4 | 37 | 170 | 1 | 130 | 5.30e-14 | 70.1 |
MS.gene22701.t1 | MTR_4g073580 | 34.074 | 135 | 83 | 4 | 37 | 170 | 1 | 130 | 5.30e-14 | 70.1 |
MS.gene22701.t1 | MTR_4g091580 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 5.98e-14 | 74.3 |
MS.gene22701.t1 | MTR_4g091580 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 8.20e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g091580 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 9.21e-14 | 73.6 |
MS.gene22701.t1 | MTR_4g091580 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 9.21e-14 | 73.6 |
MS.gene22701.t1 | MTR_7g116360 | 32.278 | 158 | 100 | 5 | 37 | 193 | 49 | 200 | 7.15e-14 | 72.8 |
MS.gene22701.t1 | MTR_7g116360 | 32.278 | 158 | 100 | 5 | 37 | 193 | 125 | 276 | 7.15e-14 | 72.8 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 8.12e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 8.12e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 8.12e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 8.12e-14 | 73.9 |
MS.gene22701.t1 | MTR_8g081020 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 8.50e-14 | 73.9 |
MS.gene22701.t1 | MTR_8g081020 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 8.50e-14 | 73.9 |
MS.gene22701.t1 | MTR_8g081020 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 8.50e-14 | 73.9 |
MS.gene22701.t1 | MTR_8g081020 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 8.50e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g080797 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 8.65e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g080797 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 8.65e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g080797 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 8.65e-14 | 73.9 |
MS.gene22701.t1 | MTR_4g080797 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 8.65e-14 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 8.65e-14 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 8.65e-14 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 8.65e-14 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 8.65e-14 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 305 | 456 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 305 | 456 | 1.19e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g091580 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 1.29e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g091580 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.49e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g091580 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.49e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g091580 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 1.49e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g091580 | 32.278 | 158 | 100 | 5 | 37 | 193 | 381 | 532 | 1.49e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g091580 | 31.646 | 158 | 101 | 5 | 37 | 193 | 305 | 456 | 1.43e-12 | 70.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.60e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.60e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 1.60e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 1.60e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 305 | 456 | 1.60e-13 | 73.9 |
MS.gene22701.t1 | MTR_4g081010 | 32.278 | 158 | 100 | 5 | 37 | 193 | 381 | 532 | 1.60e-13 | 73.9 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.66e-13 | 73.6 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.66e-13 | 73.6 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 1.66e-13 | 73.6 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 1.66e-13 | 73.6 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 305 | 456 | 1.66e-13 | 73.6 |
MS.gene22701.t1 | MTR_8g018230 | 32.278 | 158 | 100 | 5 | 37 | 193 | 381 | 532 | 1.66e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 2.46e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 2.46e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 2.46e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 305 | 456 | 2.46e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 381 | 532 | 2.46e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 457 | 608 | 2.46e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 533 | 684 | 2.46e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 609 | 760 | 2.46e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 685 | 836 | 2.46e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g088495 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 2.80e-13 | 73.6 |
MS.gene22701.t1 | MTR_4g073580 | 35.398 | 113 | 69 | 3 | 37 | 148 | 1 | 110 | 1.18e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22701.t1 | AT2G46500 | 58.784 | 592 | 209 | 8 | 1 | 588 | 1 | 561 | 0.0 | 689 |
MS.gene22701.t1 | AT2G46500 | 58.784 | 592 | 209 | 8 | 1 | 588 | 1 | 561 | 0.0 | 689 |
MS.gene22701.t1 | AT5G24240 | 55.338 | 562 | 224 | 8 | 34 | 589 | 30 | 570 | 0.0 | 618 |
MS.gene22701.t1 | AT5G24240 | 55.338 | 562 | 224 | 8 | 34 | 589 | 30 | 570 | 0.0 | 618 |
MS.gene22701.t1 | AT2G46500 | 52.009 | 423 | 169 | 7 | 1 | 419 | 1 | 393 | 4.40e-143 | 421 |
MS.gene22701.t1 | AT2G03890 | 38.739 | 333 | 168 | 9 | 254 | 566 | 139 | 455 | 4.13e-59 | 209 |
MS.gene22701.t1 | AT1G13640 | 39.404 | 302 | 146 | 7 | 267 | 547 | 144 | 429 | 4.80e-57 | 202 |
MS.gene22701.t1 | AT1G13640 | 39.404 | 302 | 146 | 7 | 267 | 547 | 144 | 429 | 4.80e-57 | 202 |
MS.gene22701.t1 | AT3G56600 | 36.503 | 326 | 174 | 7 | 257 | 562 | 72 | 384 | 1.55e-56 | 199 |
MS.gene22701.t1 | AT3G56600 | 36.503 | 326 | 174 | 7 | 257 | 562 | 75 | 387 | 1.56e-56 | 199 |
MS.gene22701.t1 | AT3G56600 | 36.503 | 326 | 174 | 7 | 257 | 562 | 75 | 387 | 1.56e-56 | 199 |
MS.gene22701.t1 | AT2G40850 | 36.716 | 335 | 177 | 8 | 259 | 572 | 94 | 414 | 9.65e-56 | 198 |
MS.gene22701.t1 | AT1G26270 | 38.333 | 300 | 152 | 8 | 265 | 547 | 146 | 429 | 1.07e-55 | 199 |
MS.gene22701.t1 | AT2G03890 | 41.304 | 230 | 104 | 6 | 334 | 547 | 99 | 313 | 6.78e-45 | 167 |
MS.gene22701.t1 | AT1G27570 | 30.806 | 211 | 128 | 5 | 344 | 543 | 396 | 599 | 2.85e-22 | 101 |
MS.gene22701.t1 | AT1G27570 | 30.806 | 211 | 128 | 5 | 344 | 543 | 387 | 590 | 3.21e-22 | 101 |
MS.gene22701.t1 | AT4G05050 | 32.692 | 156 | 98 | 5 | 37 | 191 | 1 | 150 | 1.99e-15 | 74.3 |
MS.gene22701.t1 | AT4G05320 | 32.692 | 156 | 98 | 5 | 37 | 191 | 1 | 150 | 1.99e-15 | 74.3 |
MS.gene22701.t1 | AT2G35635 | 32.692 | 156 | 98 | 5 | 37 | 191 | 1 | 150 | 7.95e-15 | 72.8 |
MS.gene22701.t1 | AT4G05050 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT4G05050 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT4G05050 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT4G05050 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT4G05050 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT4G05050 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.50e-14 | 73.9 |
MS.gene22701.t1 | AT1G31340 | 32.692 | 156 | 98 | 5 | 37 | 191 | 1 | 150 | 1.70e-14 | 71.6 |
MS.gene22701.t1 | AT5G03240 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G03240 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G03240 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G03240 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G03240 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G03240 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G03240 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G03240 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G03240 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G20620 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G20620 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT5G20620 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 4.46e-14 | 73.9 |
MS.gene22701.t1 | AT1G55060 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.66e-14 | 72.4 |
MS.gene22701.t1 | AT1G55060 | 30.233 | 172 | 103 | 5 | 33 | 193 | 63 | 228 | 5.22e-14 | 72.4 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT4G02890 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 4.66e-14 | 73.9 |
MS.gene22701.t1 | AT1G65350 | 32.911 | 158 | 98 | 5 | 37 | 193 | 1 | 151 | 5.42e-14 | 73.9 |
MS.gene22701.t1 | AT1G65350 | 29.747 | 158 | 103 | 5 | 37 | 193 | 77 | 227 | 5.90e-12 | 67.8 |
MS.gene22701.t1 | AT3G43950 | 34.815 | 135 | 79 | 4 | 347 | 478 | 78 | 206 | 7.98e-14 | 71.6 |
MS.gene22701.t1 | AT5G20620 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 8.80e-14 | 73.9 |
MS.gene22701.t1 | AT5G20620 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 8.80e-14 | 73.9 |
MS.gene22701.t1 | AT5G20620 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 8.80e-14 | 73.9 |
MS.gene22701.t1 | AT5G20620 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 8.80e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 9.06e-14 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 305 | 456 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 1 | 152 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 77 | 228 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 153 | 304 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 229 | 380 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT4G05320 | 32.278 | 158 | 100 | 5 | 37 | 193 | 305 | 456 | 1.24e-13 | 73.9 |
MS.gene22701.t1 | AT5G37640 | 30.120 | 166 | 104 | 5 | 52 | 211 | 19 | 178 | 2.95e-12 | 68.6 |
MS.gene22701.t1 | AT5G37640 | 30.675 | 163 | 105 | 6 | 29 | 189 | 70 | 226 | 3.46e-11 | 65.5 |
MS.gene22701.t1 | AT5G37640 | 30.189 | 159 | 105 | 4 | 37 | 194 | 155 | 308 | 4.54e-11 | 65.1 |
Find 128 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTGCGACGTCCACTTAT+TGG | 0.166902 | 7.4:-1000179 | None:intergenic |
AGCTTCAGTGATTCGAAATA+TGG | 0.237481 | 7.4:+999902 | MS.gene22701:CDS |
TCTCTATCGGGAAGCTTTCT+TGG | 0.255627 | 7.4:-999837 | None:intergenic |
GGAAGTTGCTGCTTATGTTT+TGG | 0.257385 | 7.4:+1000151 | MS.gene22701:CDS |
AGTGGACGTCGCAAGTTATT+TGG | 0.265630 | 7.4:+1000185 | MS.gene22701:CDS |
CAAGCGAAGGATTGCTAAAA+AGG | 0.268222 | 7.4:+999533 | MS.gene22701:CDS |
TGCATCTGTTTGTTCGAAAA+AGG | 0.284524 | 7.4:+999664 | MS.gene22701:CDS |
TTCAATATTTCTCTCGTTCT+CGG | 0.303158 | 7.4:+999224 | MS.gene22701:CDS |
CCGTATTCTGCTGAAACTAT+TGG | 0.313231 | 7.4:+1000963 | MS.gene22701:CDS |
TATCGGTCCTGGGGCTTTCC+CGG | 0.316239 | 7.4:+1000346 | MS.gene22701:CDS |
CAGAATACGGCTGGCGAGCT+TGG | 0.326056 | 7.4:-1000950 | None:intergenic |
GATACTCTACTTAAGGATTA+TGG | 0.332495 | 7.4:+999384 | MS.gene22701:CDS |
CCTTCACCGTCTAATGATAA+TGG | 0.336135 | 7.4:-1000089 | None:intergenic |
AGAATACGGCTGGCGAGCTT+GGG | 0.336231 | 7.4:-1000949 | None:intergenic |
GCATTTGAGTCTGTTCTTCC+TGG | 0.336546 | 7.4:+1001197 | MS.gene22701:CDS |
AAGACAAGTGAGATGGTAAA+TGG | 0.339437 | 7.4:-999185 | None:intergenic |
AGCAGGAACTTGTGTGTAAT+GGG | 0.346405 | 7.4:+999580 | MS.gene22701:CDS |
AGCTGTGAAGATATCGGTCC+TGG | 0.357604 | 7.4:+1000335 | MS.gene22701:CDS |
ATCAATGTCAAAACATCTTC+GGG | 0.363524 | 7.4:+999462 | MS.gene22701:CDS |
TACTTTATGCTTGATTCAAC+TGG | 0.367790 | 7.4:+999996 | MS.gene22701:CDS |
GGACAATGACCAGTCTGTTC+TGG | 0.368416 | 7.4:+1000457 | MS.gene22701:CDS |
TAACCATCCAGGAGACTTGA+TGG | 0.377723 | 7.4:+1000271 | MS.gene22701:CDS |
ATGGAAGACTCTCACACCTT+TGG | 0.377727 | 7.4:-999308 | None:intergenic |
CGTATTCTGCTGAAACTATT+GGG | 0.383361 | 7.4:+1000964 | MS.gene22701:CDS |
GTACCTTCTGCAGATCCTAT+TGG | 0.386108 | 7.4:-999963 | None:intergenic |
CATCAATGTCAAAACATCTT+CGG | 0.391195 | 7.4:+999461 | MS.gene22701:CDS |
ATCAAGTTTCCAATTGCAAA+AGG | 0.400969 | 7.4:-1001122 | None:intergenic |
AATTAAATGCTTACACTTGT+GGG | 0.404724 | 7.4:-1000506 | None:intergenic |
TAGTTGGTCAAGGAGCGTTC+AGG | 0.416347 | 7.4:+1000129 | MS.gene22701:CDS |
GATGGTAAATGGAATGCATT+TGG | 0.428711 | 7.4:-999174 | None:intergenic |
TTTAACTAACAAACAGAAGT+TGG | 0.431926 | 7.4:+999332 | MS.gene22701:CDS |
TGGTGTTCCTCCAACATTGA+TGG | 0.433858 | 7.4:+1000226 | MS.gene22701:CDS |
TCTTGGCACCGCTCTCTGAA+TGG | 0.434707 | 7.4:-999820 | None:intergenic |
TCAATATTTCTCTCGTTCTC+GGG | 0.438311 | 7.4:+999225 | MS.gene22701:CDS |
TCGAAGTGATACTCTACTTA+AGG | 0.438824 | 7.4:+999377 | MS.gene22701:CDS |
GATGGTCAAGTGCTTGCATA+AGG | 0.443223 | 7.4:+1000244 | MS.gene22701:CDS |
CAATTGGAAACTTGATGTGC+AGG | 0.450882 | 7.4:+1001129 | MS.gene22701:CDS |
AGAGTTCGAGCACATTCAAT+TGG | 0.454661 | 7.4:-1001050 | None:intergenic |
GAACGAGAGAAATATTGAAA+TGG | 0.459276 | 7.4:-999220 | None:intergenic |
GTTCTGGTTCCAATTGATCA+TGG | 0.461509 | 7.4:+1000473 | MS.gene22701:CDS |
ATCTTAGCCATCAAGTCTCC+TGG | 0.464083 | 7.4:-1000278 | None:intergenic |
CTCCAAAAGAAAATCTCTAT+CGG | 0.467054 | 7.4:-999850 | None:intergenic |
GTTTGATGATCTTGAGGAGC+AGG | 0.472677 | 7.4:+999563 | MS.gene22701:CDS |
GCTAGCGAATACTATCCAAT+AGG | 0.473031 | 7.4:+999948 | MS.gene22701:CDS |
TAATGATAATGGAAGACCTC+GGG | 0.474414 | 7.4:-1000078 | None:intergenic |
TTGAAGAAAGGGGTTGAGAG+AGG | 0.478531 | 7.4:+1001092 | MS.gene22701:CDS |
CCAATAGTTTCAGCAGAATA+CGG | 0.480969 | 7.4:-1000963 | None:intergenic |
TCCCATTCCATAACACGAAA+AGG | 0.482974 | 7.4:-999258 | None:intergenic |
AAATTAAATGCTTACACTTG+TGG | 0.484991 | 7.4:-1000507 | None:intergenic |
CATAAGGGATTTAACCATCC+AGG | 0.485124 | 7.4:+1000260 | MS.gene22701:CDS |
AAGCAGTATCCATGATCAAT+TGG | 0.485316 | 7.4:-1000482 | None:intergenic |
AGTTGGTCAAGGAGCGTTCA+GGG | 0.486553 | 7.4:+1000130 | MS.gene22701:CDS |
GAACAAGGAATCTGTGATAG+AGG | 0.486875 | 7.4:+1001160 | MS.gene22701:CDS |
TCAAGTTTCCAATTGCAAAA+GGG | 0.487387 | 7.4:-1001121 | None:intergenic |
AACCCCTTTCTTCAAAAGCA+TGG | 0.489309 | 7.4:-1001084 | None:intergenic |
AATGGCTCAGTGGGATCCAC+TGG | 0.494737 | 7.4:-999144 | None:intergenic |
GGAGACTTGATGGCTAAGAT+TGG | 0.495959 | 7.4:+1000281 | MS.gene22701:CDS |
ATAGGATCTGCAGAAGGTAC+CGG | 0.497760 | 7.4:+999966 | MS.gene22701:CDS |
TATCACTTCGAGCGAGTTCA+CGG | 0.499648 | 7.4:-999365 | None:intergenic |
AGATGCTGTTTCTCAAATCA+TGG | 0.499783 | 7.4:+1001241 | MS.gene22701:CDS |
TTCTTGTGGAAGAAAATTTG+AGG | 0.501544 | 7.4:+999773 | MS.gene22701:CDS |
GCAAATGCAGATAGGCATGC+TGG | 0.503643 | 7.4:+1000410 | MS.gene22701:CDS |
AAACAGAAGTTGGTTTATGC+TGG | 0.505699 | 7.4:+999342 | MS.gene22701:CDS |
AGTACACAAAATTAGTGTAC+TGG | 0.506035 | 7.4:+1000376 | MS.gene22701:CDS |
CAAGTTATTTGGTGATGTGA+AGG | 0.508171 | 7.4:+1000196 | MS.gene22701:CDS |
TCCAAAAGAAAATCTCTATC+GGG | 0.509865 | 7.4:-999849 | None:intergenic |
GCCATTGGCTCTTCGTCGAT+AGG | 0.511038 | 7.4:-1000044 | None:intergenic |
TAGTGTACTGGACATAAGAT+TGG | 0.513283 | 7.4:+1000388 | MS.gene22701:CDS |
GAGAGTTGAAAATCTTATCA+AGG | 0.515143 | 7.4:-1001271 | None:intergenic |
TAAGATTGGCAAATGCAGAT+AGG | 0.515290 | 7.4:+1000402 | MS.gene22701:CDS |
CAAGTTTCCAATTGCAAAAG+GGG | 0.516578 | 7.4:-1001120 | None:intergenic |
CCATTATCATTAGACGGTGA+AGG | 0.523513 | 7.4:+1000089 | MS.gene22701:CDS |
TAGGATCTGCAGAAGGTACC+GGG | 0.527750 | 7.4:+999967 | MS.gene22701:CDS |
TGTGGAAGAAAATTTGAGGT+TGG | 0.531735 | 7.4:+999777 | MS.gene22701:CDS |
GTGTAATGGGGAACGGTTGG+AGG | 0.532109 | 7.4:+999593 | MS.gene22701:CDS |
AAGTTATTTGGTGATGTGAA+GGG | 0.535843 | 7.4:+1000197 | MS.gene22701:CDS |
CACCGCTCTCTGAATGGCAT+CGG | 0.538669 | 7.4:-999814 | None:intergenic |
GCTGTGAAGATATCGGTCCT+GGG | 0.539152 | 7.4:+1000336 | MS.gene22701:CDS |
GAAACAGTTTGATGATCTTG+AGG | 0.541679 | 7.4:+999557 | MS.gene22701:CDS |
TCATTTACCGGGAAAGCCCC+AGG | 0.542503 | 7.4:-1000353 | None:intergenic |
GGAAGAAAATTTGAGGTTGG+TGG | 0.542977 | 7.4:+999780 | MS.gene22701:CDS |
GAGCAGGAACTTGTGTGTAA+TGG | 0.543660 | 7.4:+999579 | MS.gene22701:CDS |
AATGTAGCTTCACTTGTGCC+AGG | 0.546538 | 7.4:-1001215 | None:intergenic |
TATTGGGTACATAAAGTCAC+TGG | 0.549010 | 7.4:+1000980 | MS.gene22701:CDS |
TAGTTTCAGCAGAATACGGC+TGG | 0.549860 | 7.4:-1000959 | None:intergenic |
GGAGACAACAATGGCTCAGT+GGG | 0.550782 | 7.4:-999153 | None:intergenic |
TGAAAATCTTATCAAGGCGC+TGG | 0.555048 | 7.4:-1001265 | None:intergenic |
ATGGTCAAGTGCTTGCATAA+GGG | 0.559797 | 7.4:+1000245 | MS.gene22701:CDS |
AATGGGAGCTGTGAAGATAT+CGG | 0.559895 | 7.4:+1000329 | MS.gene22701:CDS |
GCCTATCGACGAAGAGCCAA+TGG | 0.563365 | 7.4:+1000043 | MS.gene22701:CDS |
GTTACAATGGACAACTCAAA+GGG | 0.565579 | 7.4:-999708 | None:intergenic |
TGTCAAAACATCTTCGGGGA+AGG | 0.565717 | 7.4:+999467 | MS.gene22701:CDS |
AAGGATTATGGAGTAACTGA+TGG | 0.571025 | 7.4:+999396 | MS.gene22701:CDS |
AGTTACAATGGACAACTCAA+AGG | 0.571959 | 7.4:-999709 | None:intergenic |
CAAATGCAGATAGGCATGCT+GGG | 0.572744 | 7.4:+1000411 | MS.gene22701:CDS |
CACTTGACCATCAATGTTGG+AGG | 0.573274 | 7.4:-1000233 | None:intergenic |
GAATACGGCTGGCGAGCTTG+GGG | 0.573463 | 7.4:-1000948 | None:intergenic |
TGTGTGTAATGGGGAACGGT+TGG | 0.578859 | 7.4:+999590 | MS.gene22701:CDS |
AAGCATAAAGTAAGCTCCCC+CGG | 0.581274 | 7.4:-999985 | None:intergenic |
GTCCATTGTAACTACAGACT+TGG | 0.582693 | 7.4:+999719 | MS.gene22701:CDS |
TGTTAGTACTCTTAGTCCAG+TGG | 0.584156 | 7.4:+999128 | MS.gene22701:CDS |
GGTCTTCCATTATCATTAGA+CGG | 0.588994 | 7.4:+1000083 | MS.gene22701:CDS |
TCCTCAAAAGACAAGTGAGA+TGG | 0.590743 | 7.4:-999192 | None:intergenic |
AGCCAAGTCTGTAGTTACAA+TGG | 0.593929 | 7.4:-999721 | None:intergenic |
AAGGGTACAATAGTTGGTCA+AGG | 0.598430 | 7.4:+1000119 | MS.gene22701:CDS |
TTAGTGAAAATGTCATCTGC+TGG | 0.606185 | 7.4:+999105 | None:intergenic |
ATGTAAAATACATCAAGCGA+AGG | 0.618575 | 7.4:+999520 | MS.gene22701:CDS |
ATGGTAAACTCTGCATACGA+TGG | 0.619677 | 7.4:+999921 | MS.gene22701:CDS |
AAGCACTTGACCATCAATGT+TGG | 0.627426 | 7.4:-1000236 | None:intergenic |
TACCGATGCCATTCAGAGAG+CGG | 0.639607 | 7.4:+999812 | MS.gene22701:CDS |
CTGTGAAGATATCGGTCCTG+GGG | 0.640174 | 7.4:+1000337 | MS.gene22701:CDS |
TAGCCATCAAGTCTCCTGGA+TGG | 0.640520 | 7.4:-1000274 | None:intergenic |
CTGCAAGCATAATGATGCAG+TGG | 0.641116 | 7.4:+999641 | MS.gene22701:CDS |
CTAATGATAATGGAAGACCT+CGG | 0.646268 | 7.4:-1000079 | None:intergenic |
AACTTGTGTGTAATGGGGAA+CGG | 0.646813 | 7.4:+999586 | MS.gene22701:CDS |
TGGAGACAACAATGGCTCAG+TGG | 0.649706 | 7.4:-999154 | None:intergenic |
AATTGGAAACTTGATGTGCA+GGG | 0.653610 | 7.4:+1001130 | MS.gene22701:CDS |
GTGCAGGGAATCATTGAACA+AGG | 0.654835 | 7.4:+1001145 | MS.gene22701:CDS |
CTGTTAAGTTCAAAATCCAA+AGG | 0.656079 | 7.4:+999292 | MS.gene22701:CDS |
AATGCATTTGGAGACAACAA+TGG | 0.660019 | 7.4:-999162 | None:intergenic |
AATGATAATGGAAGACCTCG+GGG | 0.661241 | 7.4:-1000077 | None:intergenic |
CAATTGGAACCAGAACAGAC+TGG | 0.671066 | 7.4:-1000466 | None:intergenic |
AGGATCTGCAGAAGGTACCG+GGG | 0.678821 | 7.4:+999968 | MS.gene22701:CDS |
GCAGGAACTTGTGTGTAATG+GGG | 0.680555 | 7.4:+999581 | MS.gene22701:CDS |
TATCCAATAGGATCTGCAGA+AGG | 0.683129 | 7.4:+999960 | MS.gene22701:CDS |
TCAATGTCAAAACATCTTCG+GGG | 0.701785 | 7.4:+999463 | MS.gene22701:CDS |
GGATCTGCAGAAGGTACCGG+GGG | 0.709644 | 7.4:+999969 | MS.gene22701:CDS |
ATGATAATGGAAGACCTCGG+GGG | 0.745031 | 7.4:-1000076 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATGACTTAAAAAATGAAT+TGG | + | chr7.4:1000763-1000782 | MS.gene22701:intron | 15.0% |
!!! | AACATAATGTTTTCAAATAG+TGG | + | chr7.4:1000589-1000608 | MS.gene22701:intron | 20.0% |
!!! | ATTTTAGGGTTAACTATAAT+TGG | - | chr7.4:999876-999895 | None:intergenic | 20.0% |
!!! | TTCTGTTTGTTAGTTAAAAA+TGG | - | chr7.4:999330-999349 | None:intergenic | 20.0% |
! | AAATTAAATGCTTACACTTG+TGG | - | chr7.4:1000510-1000529 | None:intergenic | 25.0% |
! | AATTAAATGCTTACACTTGT+GGG | - | chr7.4:1000509-1000528 | None:intergenic | 25.0% |
! | ACTTAAAAAATGAATTGGCT+AGG | + | chr7.4:1000768-1000787 | MS.gene22701:intron | 25.0% |
! | AGATGTTTGTGAAAAACAAT+GGG | + | chr7.4:1000312-1000331 | MS.gene22701:CDS | 25.0% |
! | TGTATTGAAATAATGAAGTC+TGG | + | chr7.4:1000809-1000828 | MS.gene22701:intron | 25.0% |
! | TTTAACTAACAAACAGAAGT+TGG | + | chr7.4:999332-999351 | MS.gene22701:CDS | 25.0% |
! | TTTGTGCAATCTACAATATA+TGG | + | chr7.4:1000727-1000746 | MS.gene22701:intron | 25.0% |
!! | ATTTTGTGTACTTCATTTAC+CGG | - | chr7.4:1000368-1000387 | None:intergenic | 25.0% |
!! | TTAAAAAAGGGTACAATAGT+TGG | + | chr7.4:1000113-1000132 | MS.gene22701:CDS | 25.0% |
!! | TTGAAGATTGTACTTTTGAA+TGG | + | chr7.4:1000916-1000935 | MS.gene22701:CDS | 25.0% |
!! | TTTTCAAATAGTGGTTATAG+CGG | + | chr7.4:1000598-1000617 | MS.gene22701:intron | 25.0% |
!!! | GATGTTTTTGAAAATTCTTG+TGG | + | chr7.4:999759-999778 | MS.gene22701:CDS | 25.0% |
AGTACACAAAATTAGTGTAC+TGG | + | chr7.4:1000376-1000395 | MS.gene22701:CDS | 30.0% | |
ATCAAGTTTCCAATTGCAAA+AGG | - | chr7.4:1001125-1001144 | None:intergenic | 30.0% | |
ATCAATGTCAAAACATCTTC+GGG | + | chr7.4:999462-999481 | MS.gene22701:CDS | 30.0% | |
ATGTAAAATACATCAAGCGA+AGG | + | chr7.4:999520-999539 | MS.gene22701:CDS | 30.0% | |
CAGATGTTTGTGAAAAACAA+TGG | + | chr7.4:1000311-1000330 | MS.gene22701:CDS | 30.0% | |
CATCAATGTCAAAACATCTT+CGG | + | chr7.4:999461-999480 | MS.gene22701:CDS | 30.0% | |
CTCCAAAAGAAAATCTCTAT+CGG | - | chr7.4:999853-999872 | None:intergenic | 30.0% | |
CTGTTAAGTTCAAAATCCAA+AGG | + | chr7.4:999292-999311 | MS.gene22701:CDS | 30.0% | |
GAACGAGAGAAATATTGAAA+TGG | - | chr7.4:999223-999242 | None:intergenic | 30.0% | |
GAGAGTTGAAAATCTTATCA+AGG | - | chr7.4:1001274-1001293 | None:intergenic | 30.0% | |
GATACTCTACTTAAGGATTA+TGG | + | chr7.4:999384-999403 | MS.gene22701:CDS | 30.0% | |
TACTTTATGCTTGATTCAAC+TGG | + | chr7.4:999996-1000015 | MS.gene22701:CDS | 30.0% | |
TCAAGTTTCCAATTGCAAAA+GGG | - | chr7.4:1001124-1001143 | None:intergenic | 30.0% | |
TCCAAAAGAAAATCTCTATC+GGG | - | chr7.4:999852-999871 | None:intergenic | 30.0% | |
TTCAATATTTCTCTCGTTCT+CGG | + | chr7.4:999224-999243 | MS.gene22701:CDS | 30.0% | |
TTCTTGTGGAAGAAAATTTG+AGG | + | chr7.4:999773-999792 | MS.gene22701:CDS | 30.0% | |
TTGAAATAATGAAGTCTGGT+TGG | + | chr7.4:1000813-1000832 | MS.gene22701:intron | 30.0% | |
! | ACTGAAGCTAACTCAATTTT+AGG | - | chr7.4:999891-999910 | None:intergenic | 30.0% |
! | CTGAAGCTAACTCAATTTTA+GGG | - | chr7.4:999890-999909 | None:intergenic | 30.0% |
! | TTTTGTGTACTTCATTTACC+GGG | - | chr7.4:1000367-1000386 | None:intergenic | 30.0% |
!! | AAGTTATTTGGTGATGTGAA+GGG | + | chr7.4:1000197-1000216 | MS.gene22701:CDS | 30.0% |
!!! | ACTTTTGAAGTTTCATGGAT+GGG | + | chr7.4:1001022-1001041 | MS.gene22701:CDS | 30.0% |
!!! | ATTGCACTTTTGAAGTTTCA+TGG | + | chr7.4:1001017-1001036 | MS.gene22701:CDS | 30.0% |
AAGACAAGTGAGATGGTAAA+TGG | - | chr7.4:999188-999207 | None:intergenic | 35.0% | |
AAGCAGTATCCATGATCAAT+TGG | - | chr7.4:1000485-1000504 | None:intergenic | 35.0% | |
AAGGATTATGGAGTAACTGA+TGG | + | chr7.4:999396-999415 | MS.gene22701:CDS | 35.0% | |
AATGCATTTGGAGACAACAA+TGG | - | chr7.4:999165-999184 | None:intergenic | 35.0% | |
AATTGGAAACTTGATGTGCA+GGG | + | chr7.4:1001130-1001149 | MS.gene22701:CDS | 35.0% | |
ACATAGAAGAATTGCCACAT+CGG | - | chr7.4:1000691-1000710 | None:intergenic | 35.0% | |
AGCAACAACTGTTAAACGAT+TGG | - | chr7.4:1000885-1000904 | None:intergenic | 35.0% | |
AGCTTCAGTGATTCGAAATA+TGG | + | chr7.4:999902-999921 | MS.gene22701:CDS | 35.0% | |
AGTTACAATGGACAACTCAA+AGG | - | chr7.4:999712-999731 | None:intergenic | 35.0% | |
CAAGTTTCCAATTGCAAAAG+GGG | - | chr7.4:1001123-1001142 | None:intergenic | 35.0% | |
CCAATAGTTTCAGCAGAATA+CGG | - | chr7.4:1000966-1000985 | None:intergenic | 35.0% | |
CGTATTCTGCTGAAACTATT+GGG | + | chr7.4:1000964-1000983 | MS.gene22701:CDS | 35.0% | |
GATGGTAAATGGAATGCATT+TGG | - | chr7.4:999177-999196 | None:intergenic | 35.0% | |
GGTCTTCCATTATCATTAGA+CGG | + | chr7.4:1000083-1000102 | MS.gene22701:CDS | 35.0% | |
GTGTTGTCAATTGCAAATGA+TGG | - | chr7.4:1000669-1000688 | None:intergenic | 35.0% | |
GTTACAATGGACAACTCAAA+GGG | - | chr7.4:999711-999730 | None:intergenic | 35.0% | |
TAAGATTGGCAAATGCAGAT+AGG | + | chr7.4:1000402-1000421 | MS.gene22701:CDS | 35.0% | |
TAGTGTACTGGACATAAGAT+TGG | + | chr7.4:1000388-1000407 | MS.gene22701:CDS | 35.0% | |
TATTGGGTACATAAAGTCAC+TGG | + | chr7.4:1000980-1000999 | MS.gene22701:CDS | 35.0% | |
TCAATATTTCTCTCGTTCTC+GGG | + | chr7.4:999225-999244 | MS.gene22701:CDS | 35.0% | |
TCAATGTCAAAACATCTTCG+GGG | + | chr7.4:999463-999482 | MS.gene22701:CDS | 35.0% | |
TCGAAGTGATACTCTACTTA+AGG | + | chr7.4:999377-999396 | MS.gene22701:CDS | 35.0% | |
TGCATCTGTTTGTTCGAAAA+AGG | + | chr7.4:999664-999683 | MS.gene22701:CDS | 35.0% | |
! | AAACAGAAGTTGGTTTATGC+TGG | + | chr7.4:999342-999361 | MS.gene22701:CDS | 35.0% |
! | GAAACAGTTTGATGATCTTG+AGG | + | chr7.4:999557-999576 | MS.gene22701:CDS | 35.0% |
! | GTTTTTCACAAACATCTGCA+TGG | - | chr7.4:1000309-1000328 | None:intergenic | 35.0% |
! | TCCCGATAGAGATTTTCTTT+TGG | + | chr7.4:999848-999867 | MS.gene22701:CDS | 35.0% |
! | TCCTTTTCGTGTTATGGAAT+GGG | + | chr7.4:999257-999276 | MS.gene22701:CDS | 35.0% |
! | TGTGGAAGAAAATTTGAGGT+TGG | + | chr7.4:999777-999796 | MS.gene22701:CDS | 35.0% |
!! | AACCATGCTTTTGAAGAAAG+GGG | + | chr7.4:1001082-1001101 | MS.gene22701:CDS | 35.0% |
!! | AGATGCTGTTTCTCAAATCA+TGG | + | chr7.4:1001241-1001260 | MS.gene22701:CDS | 35.0% |
!! | CAACCATGCTTTTGAAGAAA+GGG | + | chr7.4:1001081-1001100 | MS.gene22701:CDS | 35.0% |
!! | CAAGTTATTTGGTGATGTGA+AGG | + | chr7.4:1000196-1000215 | MS.gene22701:CDS | 35.0% |
!! | CTAATGATAATGGAAGACCT+CGG | - | chr7.4:1000082-1000101 | None:intergenic | 35.0% |
!! | GTACTTTTGAATGGCTTTAC+TGG | + | chr7.4:1000925-1000944 | MS.gene22701:CDS | 35.0% |
!! | GTTTTGGATCATCCAATAAG+TGG | + | chr7.4:1000167-1000186 | MS.gene22701:CDS | 35.0% |
!! | TAATGATAATGGAAGACCTC+GGG | - | chr7.4:1000081-1000100 | None:intergenic | 35.0% |
!! | TCAACCATGCTTTTGAAGAA+AGG | + | chr7.4:1001080-1001099 | MS.gene22701:CDS | 35.0% |
!!! | CACTTTTGAAGTTTCATGGA+TGG | + | chr7.4:1001021-1001040 | MS.gene22701:CDS | 35.0% |
!!! | GAATATTTTGATCAGCACAG+TGG | + | chr7.4:1000433-1000452 | MS.gene22701:CDS | 35.0% |
AACCCCTTTCTTCAAAAGCA+TGG | - | chr7.4:1001087-1001106 | None:intergenic | 40.0% | |
AAGCACTTGACCATCAATGT+TGG | - | chr7.4:1000239-1000258 | None:intergenic | 40.0% | |
AATGGGAGCTGTGAAGATAT+CGG | + | chr7.4:1000329-1000348 | MS.gene22701:CDS | 40.0% | |
AGACGGTGAAGGCTTAAAAA+AGG | + | chr7.4:1000100-1000119 | MS.gene22701:CDS | 40.0% | |
AGAGTTCGAGCACATTCAAT+TGG | - | chr7.4:1001053-1001072 | None:intergenic | 40.0% | |
AGCAGGAACTTGTGTGTAAT+GGG | + | chr7.4:999580-999599 | MS.gene22701:CDS | 40.0% | |
AGCCAAGTCTGTAGTTACAA+TGG | - | chr7.4:999724-999743 | None:intergenic | 40.0% | |
ATGGTAAACTCTGCATACGA+TGG | + | chr7.4:999921-999940 | MS.gene22701:CDS | 40.0% | |
ATGGTCAAGTGCTTGCATAA+GGG | + | chr7.4:1000245-1000264 | MS.gene22701:CDS | 40.0% | |
CAAGCGAAGGATTGCTAAAA+AGG | + | chr7.4:999533-999552 | MS.gene22701:CDS | 40.0% | |
CAATTGGAAACTTGATGTGC+AGG | + | chr7.4:1001129-1001148 | MS.gene22701:CDS | 40.0% | |
CATAAGGGATTTAACCATCC+AGG | + | chr7.4:1000260-1000279 | MS.gene22701:CDS | 40.0% | |
CCATTATCATTAGACGGTGA+AGG | + | chr7.4:1000089-1000108 | MS.gene22701:CDS | 40.0% | |
CCGTATTCTGCTGAAACTAT+TGG | + | chr7.4:1000963-1000982 | MS.gene22701:CDS | 40.0% | |
CCTTCACCGTCTAATGATAA+TGG | - | chr7.4:1000092-1000111 | None:intergenic | 40.0% | |
GAACAAGGAATCTGTGATAG+AGG | + | chr7.4:1001160-1001179 | MS.gene22701:CDS | 40.0% | |
GACGGTGAAGGCTTAAAAAA+GGG | + | chr7.4:1000101-1000120 | MS.gene22701:CDS | 40.0% | |
GCTAGCGAATACTATCCAAT+AGG | + | chr7.4:999948-999967 | MS.gene22701:CDS | 40.0% | |
GTCCATTGTAACTACAGACT+TGG | + | chr7.4:999719-999738 | MS.gene22701:CDS | 40.0% | |
TATCCAATAGGATCTGCAGA+AGG | + | chr7.4:999960-999979 | MS.gene22701:CDS | 40.0% | |
TCCCATTCCATAACACGAAA+AGG | - | chr7.4:999261-999280 | None:intergenic | 40.0% | |
TCCTCAAAAGACAAGTGAGA+TGG | - | chr7.4:999195-999214 | None:intergenic | 40.0% | |
TGAAAATCTTATCAAGGCGC+TGG | - | chr7.4:1001268-1001287 | None:intergenic | 40.0% | |
TGTTAGTACTCTTAGTCCAG+TGG | + | chr7.4:999128-999147 | MS.gene22701:CDS | 40.0% | |
! | AACTTGTGTGTAATGGGGAA+CGG | + | chr7.4:999586-999605 | MS.gene22701:CDS | 40.0% |
! | AAGGGTACAATAGTTGGTCA+AGG | + | chr7.4:1000119-1000138 | MS.gene22701:CDS | 40.0% |
! | ACCATCTCACTTGTCTTTTG+AGG | + | chr7.4:999191-999210 | MS.gene22701:CDS | 40.0% |
! | CTCCTTTTCGTGTTATGGAA+TGG | + | chr7.4:999256-999275 | MS.gene22701:CDS | 40.0% |
! | GGAAGAAAATTTGAGGTTGG+TGG | + | chr7.4:999780-999799 | MS.gene22701:CDS | 40.0% |
! | GGGGAAGGAATTTTCTTTTC+AGG | + | chr7.4:999482-999501 | MS.gene22701:CDS | 40.0% |
!! | AATGATAATGGAAGACCTCG+GGG | - | chr7.4:1000080-1000099 | None:intergenic | 40.0% |
!! | GGAAGTTGCTGCTTATGTTT+TGG | + | chr7.4:1000151-1000170 | MS.gene22701:CDS | 40.0% |
!! | GTTCTGGTTCCAATTGATCA+TGG | + | chr7.4:1000473-1000492 | MS.gene22701:CDS | 40.0% |
!! | GTTGACTCCTTTTCGTGTTA+TGG | + | chr7.4:999251-999270 | MS.gene22701:CDS | 40.0% |
!!! | TATTTTGATCAGCACAGTGG+AGG | + | chr7.4:1000436-1000455 | MS.gene22701:CDS | 40.0% |
!!! | TTTTCTTTTCAGGTCGAACG+AGG | + | chr7.4:999492-999511 | MS.gene22701:CDS | 40.0% |
AACTTGCGACGTCCACTTAT+TGG | - | chr7.4:1000182-1000201 | None:intergenic | 45.0% | |
AAGCATAAAGTAAGCTCCCC+CGG | - | chr7.4:999988-1000007 | None:intergenic | 45.0% | |
AATGTAGCTTCACTTGTGCC+AGG | - | chr7.4:1001218-1001237 | None:intergenic | 45.0% | |
AGTGGACGTCGCAAGTTATT+TGG | + | chr7.4:1000185-1000204 | MS.gene22701:CDS | 45.0% | |
ATCTTAGCCATCAAGTCTCC+TGG | - | chr7.4:1000281-1000300 | None:intergenic | 45.0% | |
ATGGAAGACTCTCACACCTT+TGG | - | chr7.4:999311-999330 | None:intergenic | 45.0% | |
CAAATGCAGATAGGCATGCT+GGG | + | chr7.4:1000411-1000430 | MS.gene22701:CDS | 45.0% | |
CAATTGGAACCAGAACAGAC+TGG | - | chr7.4:1000469-1000488 | None:intergenic | 45.0% | |
CACTTGACCATCAATGTTGG+AGG | - | chr7.4:1000236-1000255 | None:intergenic | 45.0% | |
CTGCAAGCATAATGATGCAG+TGG | + | chr7.4:999641-999660 | MS.gene22701:CDS | 45.0% | |
GAGCAGGAACTTGTGTGTAA+TGG | + | chr7.4:999579-999598 | MS.gene22701:CDS | 45.0% | |
GATGGTCAAGTGCTTGCATA+AGG | + | chr7.4:1000244-1000263 | MS.gene22701:CDS | 45.0% | |
GCAGGAACTTGTGTGTAATG+GGG | + | chr7.4:999581-999600 | MS.gene22701:CDS | 45.0% | |
GCATTTGAGTCTGTTCTTCC+TGG | + | chr7.4:1001197-1001216 | MS.gene22701:CDS | 45.0% | |
GTACCTTCTGCAGATCCTAT+TGG | - | chr7.4:999966-999985 | None:intergenic | 45.0% | |
GTGCAGGGAATCATTGAACA+AGG | + | chr7.4:1001145-1001164 | MS.gene22701:CDS | 45.0% | |
TAACCATCCAGGAGACTTGA+TGG | + | chr7.4:1000271-1000290 | MS.gene22701:CDS | 45.0% | |
TAGTTTCAGCAGAATACGGC+TGG | - | chr7.4:1000962-1000981 | None:intergenic | 45.0% | |
TATCACTTCGAGCGAGTTCA+CGG | - | chr7.4:999368-999387 | None:intergenic | 45.0% | |
TCTCTATCGGGAAGCTTTCT+TGG | - | chr7.4:999840-999859 | None:intergenic | 45.0% | |
TGCAATTGACAACACCGATG+TGG | + | chr7.4:1000674-1000693 | MS.gene22701:intron | 45.0% | |
TGGTGTTCCTCCAACATTGA+TGG | + | chr7.4:1000226-1000245 | MS.gene22701:CDS | 45.0% | |
TGTCAAAACATCTTCGGGGA+AGG | + | chr7.4:999467-999486 | MS.gene22701:CDS | 45.0% | |
TTGAAGAAAGGGGTTGAGAG+AGG | + | chr7.4:1001092-1001111 | MS.gene22701:CDS | 45.0% | |
! | ATAGGATCTGCAGAAGGTAC+CGG | + | chr7.4:999966-999985 | MS.gene22701:CDS | 45.0% |
! | GGAGACTTGATGGCTAAGAT+TGG | + | chr7.4:1000281-1000300 | MS.gene22701:CDS | 45.0% |
! | GGATTGACCCCTTTTGCAAT+TGG | + | chr7.4:1001113-1001132 | MS.gene22701:CDS | 45.0% |
! | GTTTGATGATCTTGAGGAGC+AGG | + | chr7.4:999563-999582 | MS.gene22701:CDS | 45.0% |
!! | ATGATAATGGAAGACCTCGG+GGG | - | chr7.4:1000079-1000098 | None:intergenic | 45.0% |
!!! | TTTTCAGGTCGAACGAGGTA+GGG | + | chr7.4:999497-999516 | MS.gene22701:CDS | 45.0% |
AGCTGTGAAGATATCGGTCC+TGG | + | chr7.4:1000335-1000354 | MS.gene22701:CDS | 50.0% | |
CTGTGAAGATATCGGTCCTG+GGG | + | chr7.4:1000337-1000356 | MS.gene22701:CDS | 50.0% | |
GCAAATGCAGATAGGCATGC+TGG | + | chr7.4:1000410-1000429 | MS.gene22701:CDS | 50.0% | |
GCTGTGAAGATATCGGTCCT+GGG | + | chr7.4:1000336-1000355 | MS.gene22701:CDS | 50.0% | |
GGACAATGACCAGTCTGTTC+TGG | + | chr7.4:1000457-1000476 | MS.gene22701:CDS | 50.0% | |
GGAGACAACAATGGCTCAGT+GGG | - | chr7.4:999156-999175 | None:intergenic | 50.0% | |
TACCGATGCCATTCAGAGAG+CGG | + | chr7.4:999812-999831 | MS.gene22701:CDS | 50.0% | |
TAGCCATCAAGTCTCCTGGA+TGG | - | chr7.4:1000277-1000296 | None:intergenic | 50.0% | |
TGGAGACAACAATGGCTCAG+TGG | - | chr7.4:999157-999176 | None:intergenic | 50.0% | |
! | GGTGATGTGAAGGGTTTTGC+TGG | + | chr7.4:1000206-1000225 | MS.gene22701:CDS | 50.0% |
! | TGTGTGTAATGGGGAACGGT+TGG | + | chr7.4:999590-999609 | MS.gene22701:CDS | 50.0% |
!! | AGTTGGTCAAGGAGCGTTCA+GGG | + | chr7.4:1000130-1000149 | MS.gene22701:CDS | 50.0% |
!! | TAGGATCTGCAGAAGGTACC+GGG | + | chr7.4:999967-999986 | MS.gene22701:CDS | 50.0% |
!! | TAGTTGGTCAAGGAGCGTTC+AGG | + | chr7.4:1000129-1000148 | MS.gene22701:CDS | 50.0% |
!!! | CTTTTCAGGTCGAACGAGGT+AGG | + | chr7.4:999496-999515 | MS.gene22701:CDS | 50.0% |
AATGGCTCAGTGGGATCCAC+TGG | - | chr7.4:999147-999166 | None:intergenic | 55.0% | |
AGAATACGGCTGGCGAGCTT+GGG | - | chr7.4:1000952-1000971 | None:intergenic | 55.0% | |
ATGGCTGTGAATAACCCCCG+AGG | + | chr7.4:1000062-1000081 | MS.gene22701:CDS | 55.0% | |
CACCGCTCTCTGAATGGCAT+CGG | - | chr7.4:999817-999836 | None:intergenic | 55.0% | |
CGGGGGTTATTCACAGCCAT+TGG | - | chr7.4:1000062-1000081 | None:intergenic | 55.0% | |
GCCTATCGACGAAGAGCCAA+TGG | + | chr7.4:1000043-1000062 | MS.gene22701:CDS | 55.0% | |
TCATTTACCGGGAAAGCCCC+AGG | - | chr7.4:1000356-1000375 | None:intergenic | 55.0% | |
TCTTGGCACCGCTCTCTGAA+TGG | - | chr7.4:999823-999842 | None:intergenic | 55.0% | |
! | GTGTAATGGGGAACGGTTGG+AGG | + | chr7.4:999593-999612 | MS.gene22701:CDS | 55.0% |
!! | AGGATCTGCAGAAGGTACCG+GGG | + | chr7.4:999968-999987 | MS.gene22701:CDS | 55.0% |
!! | GCCATTGGCTCTTCGTCGAT+AGG | - | chr7.4:1000047-1000066 | None:intergenic | 55.0% |
CAGAATACGGCTGGCGAGCT+TGG | - | chr7.4:1000953-1000972 | None:intergenic | 60.0% | |
GAATACGGCTGGCGAGCTTG+GGG | - | chr7.4:1000951-1000970 | None:intergenic | 60.0% | |
TATCGGTCCTGGGGCTTTCC+CGG | + | chr7.4:1000346-1000365 | MS.gene22701:CDS | 60.0% | |
!! | GGATCTGCAGAAGGTACCGG+GGG | + | chr7.4:999969-999988 | MS.gene22701:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 999114 | 1001301 | 999114 | ID=MS.gene22701 |
chr7.4 | mRNA | 999114 | 1001301 | 999114 | ID=MS.gene22701.t1;Parent=MS.gene22701 |
chr7.4 | exon | 999114 | 1000514 | 999114 | ID=MS.gene22701.t1.exon1;Parent=MS.gene22701.t1 |
chr7.4 | CDS | 999114 | 1000514 | 999114 | ID=cds.MS.gene22701.t1;Parent=MS.gene22701.t1 |
chr7.4 | exon | 1000915 | 1001301 | 1000915 | ID=MS.gene22701.t1.exon2;Parent=MS.gene22701.t1 |
chr7.4 | CDS | 1000915 | 1001301 | 1000915 | ID=cds.MS.gene22701.t1;Parent=MS.gene22701.t1 |
Gene Sequence |
Protein sequence |