Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22966.t1 | XP_003625919.2 | 96.5 | 346 | 7 | 1 | 1 | 346 | 1 | 341 | 4.00E-194 | 687.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22966.t1 | Q9C942 | 38.5 | 283 | 171 | 3 | 9 | 289 | 41 | 322 | 5.0e-52 | 206.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22966.t1 | G7KRW6 | 96.5 | 346 | 7 | 1 | 1 | 346 | 1 | 341 | 2.9e-194 | 687.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22966 | MS.gene92221 | PPI |
| MS.gene54469 | MS.gene22966 | PPI |
| MS.gene22966 | MS.gene80965 | PPI |
| MS.gene22966 | MS.gene76909 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22966.t1 | MTR_7g108770 | 96.532 | 346 | 7 | 1 | 1 | 346 | 1 | 341 | 0.0 | 693 |
| MS.gene22966.t1 | MTR_1g088470 | 71.383 | 311 | 87 | 2 | 1 | 309 | 1 | 311 | 9.57e-169 | 473 |
| MS.gene22966.t1 | MTR_1g115535 | 51.903 | 289 | 138 | 1 | 2 | 289 | 4 | 292 | 1.95e-113 | 332 |
| MS.gene22966.t1 | MTR_1g115535 | 51.903 | 289 | 138 | 1 | 2 | 289 | 8 | 296 | 2.87e-113 | 332 |
| MS.gene22966.t1 | MTR_6g018490 | 48.264 | 288 | 148 | 1 | 5 | 291 | 51 | 338 | 1.10e-97 | 293 |
| MS.gene22966.t1 | MTR_6g025610 | 48.264 | 288 | 148 | 1 | 5 | 291 | 41 | 328 | 1.70e-97 | 292 |
| MS.gene22966.t1 | MTR_7g007260 | 45.455 | 286 | 155 | 1 | 5 | 289 | 52 | 337 | 9.04e-92 | 278 |
| MS.gene22966.t1 | MTR_1g110670 | 42.756 | 283 | 160 | 1 | 8 | 288 | 73 | 355 | 4.87e-87 | 266 |
| MS.gene22966.t1 | MTR_6g084420 | 44.444 | 288 | 157 | 3 | 9 | 293 | 54 | 341 | 4.27e-86 | 263 |
| MS.gene22966.t1 | MTR_5g056550 | 43.816 | 283 | 157 | 1 | 8 | 288 | 107 | 389 | 1.17e-84 | 261 |
| MS.gene22966.t1 | MTR_4g089170 | 45.520 | 279 | 150 | 1 | 12 | 288 | 43 | 321 | 8.28e-81 | 249 |
| MS.gene22966.t1 | MTR_7g007260 | 42.308 | 286 | 151 | 2 | 5 | 289 | 52 | 324 | 1.18e-79 | 246 |
| MS.gene22966.t1 | MTR_7g007260 | 42.160 | 287 | 151 | 3 | 5 | 289 | 52 | 325 | 1.42e-78 | 244 |
| MS.gene22966.t1 | MTR_5g056550 | 39.223 | 283 | 137 | 2 | 8 | 288 | 107 | 356 | 2.26e-68 | 218 |
| MS.gene22966.t1 | MTR_1g095110 | 38.047 | 297 | 178 | 5 | 7 | 299 | 30 | 324 | 1.82e-63 | 205 |
| MS.gene22966.t1 | MTR_4g127220 | 37.143 | 280 | 173 | 3 | 12 | 289 | 35 | 313 | 1.03e-61 | 200 |
| MS.gene22966.t1 | MTR_6g071475 | 34.155 | 284 | 173 | 9 | 10 | 288 | 114 | 388 | 1.15e-34 | 131 |
| MS.gene22966.t1 | MTR_5g056550 | 40.397 | 151 | 86 | 2 | 8 | 156 | 107 | 255 | 2.15e-32 | 122 |
| MS.gene22966.t1 | MTR_5g056550 | 41.007 | 139 | 80 | 1 | 8 | 144 | 107 | 245 | 3.81e-31 | 118 |
| MS.gene22966.t1 | MTR_3g109870 | 28.520 | 277 | 167 | 9 | 16 | 288 | 103 | 352 | 2.37e-24 | 102 |
| MS.gene22966.t1 | MTR_1g110680 | 41.489 | 94 | 47 | 2 | 197 | 288 | 15 | 102 | 4.75e-16 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22966.t1 | AT3G62860 | 67.723 | 347 | 109 | 2 | 1 | 345 | 2 | 347 | 0.0 | 510 |
| MS.gene22966.t1 | AT2G47630 | 66.476 | 349 | 107 | 3 | 4 | 345 | 5 | 350 | 4.28e-174 | 487 |
| MS.gene22966.t1 | AT3G62860 | 68.197 | 305 | 94 | 2 | 43 | 345 | 1 | 304 | 5.32e-159 | 447 |
| MS.gene22966.t1 | AT2G47630 | 65.909 | 308 | 97 | 2 | 43 | 345 | 1 | 305 | 2.02e-150 | 426 |
| MS.gene22966.t1 | AT2G47630 | 65.347 | 303 | 97 | 2 | 48 | 345 | 26 | 325 | 2.47e-146 | 416 |
| MS.gene22966.t1 | AT2G39420 | 57.877 | 292 | 122 | 1 | 5 | 295 | 8 | 299 | 1.81e-123 | 358 |
| MS.gene22966.t1 | AT2G39410 | 55.517 | 290 | 128 | 1 | 4 | 292 | 7 | 296 | 4.24e-119 | 347 |
| MS.gene22966.t1 | AT3G55180 | 56.597 | 288 | 123 | 1 | 7 | 292 | 4 | 291 | 5.71e-118 | 343 |
| MS.gene22966.t1 | AT2G39400 | 55.017 | 289 | 129 | 1 | 7 | 294 | 4 | 292 | 6.77e-116 | 338 |
| MS.gene22966.t1 | AT3G55190 | 46.417 | 321 | 164 | 3 | 1 | 319 | 4 | 318 | 4.78e-104 | 308 |
| MS.gene22966.t1 | AT5G16120 | 46.622 | 296 | 157 | 1 | 5 | 299 | 53 | 348 | 2.83e-94 | 285 |
| MS.gene22966.t1 | AT5G16120 | 46.622 | 296 | 157 | 1 | 5 | 299 | 53 | 348 | 2.83e-94 | 285 |
| MS.gene22966.t1 | AT5G16120 | 46.622 | 296 | 157 | 1 | 5 | 299 | 71 | 366 | 7.35e-94 | 284 |
| MS.gene22966.t1 | AT5G16120 | 46.622 | 296 | 157 | 1 | 5 | 299 | 85 | 380 | 8.83e-94 | 285 |
| MS.gene22966.t1 | AT1G11090 | 46.099 | 282 | 150 | 1 | 9 | 288 | 31 | 312 | 4.48e-87 | 265 |
| MS.gene22966.t1 | AT2G39400 | 53.881 | 219 | 100 | 1 | 6 | 223 | 3 | 221 | 7.68e-83 | 252 |
| MS.gene22966.t1 | AT1G77420 | 41.115 | 287 | 167 | 1 | 8 | 292 | 94 | 380 | 9.65e-78 | 243 |
| MS.gene22966.t1 | AT5G14980 | 38.768 | 276 | 166 | 3 | 14 | 287 | 38 | 312 | 1.35e-65 | 210 |
| MS.gene22966.t1 | AT1G52760 | 38.516 | 283 | 171 | 3 | 9 | 289 | 41 | 322 | 4.00e-65 | 209 |
| MS.gene22966.t1 | AT5G19290 | 34.471 | 293 | 188 | 3 | 6 | 295 | 30 | 321 | 6.77e-61 | 198 |
| MS.gene22966.t1 | AT1G73480 | 33.214 | 280 | 171 | 9 | 16 | 290 | 194 | 462 | 8.82e-39 | 143 |
| MS.gene22966.t1 | AT1G18360 | 33.333 | 279 | 173 | 7 | 16 | 290 | 112 | 381 | 3.35e-37 | 137 |
| MS.gene22966.t1 | AT5G11650 | 32.130 | 277 | 172 | 9 | 16 | 287 | 110 | 375 | 8.98e-35 | 131 |
| MS.gene22966.t1 | AT2G39410 | 55.682 | 88 | 38 | 1 | 4 | 90 | 7 | 94 | 8.56e-30 | 110 |
| MS.gene22966.t1 | AT5G11650 | 25.510 | 196 | 133 | 7 | 16 | 206 | 110 | 297 | 7.11e-14 | 71.6 |
Find 67 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAATGCCCTGCTTACTTC+TGG | 0.212230 | 7.3:-6162952 | None:intergenic |
| TTCAGTTCTCCAAGAGTATA+AGG | 0.225869 | 7.3:+6161513 | MS.gene22966:intron |
| TACACCATACACAGCATATT+TGG | 0.251718 | 7.3:-6161308 | None:intergenic |
| TGCTGGTTCTTAACATTTCT+AGG | 0.256347 | 7.3:-6162145 | None:intergenic |
| AAACCTCACCCTTTCTCGTT+TGG | 0.334146 | 7.3:-6161942 | None:intergenic |
| TGCATAGTTAACCTTGTATA+AGG | 0.346053 | 7.3:-6162183 | None:intergenic |
| ACATAATGGCAACCATTTAC+AGG | 0.354248 | 7.3:-6157812 | None:intergenic |
| GTAACATGCATCAGGAGTTC+TGG | 0.390797 | 7.3:+6157761 | MS.gene22966:intron |
| TCGTTTGGCCGGATCTTTGA+AGG | 0.412045 | 7.3:-6161927 | None:intergenic |
| GTTAAACCATGCCACATTCC+AGG | 0.412914 | 7.3:-6163015 | None:intergenic |
| TCAGTTCTCCAAGAGTATAA+GGG | 0.415803 | 7.3:+6161514 | MS.gene22966:intron |
| ATAATGCCCTGCTTACTTCT+GGG | 0.425265 | 7.3:-6162951 | None:intergenic |
| TCATGGTTACAAGTCTCAAT+TGG | 0.427472 | 7.3:-6163135 | None:intergenic |
| CCTTGTCGCGCCCATGTGTA+AGG | 0.433319 | 7.3:+6161627 | MS.gene22966:CDS |
| ATTATGTTCTCCAAAGGCTC+TGG | 0.439440 | 7.3:+6157828 | MS.gene22966:CDS |
| AAAATTGATGACATCCTTTG+TGG | 0.443208 | 7.3:-6161903 | None:intergenic |
| AGACTATGAAACAATCTCAT+AGG | 0.443501 | 7.3:+6163193 | MS.gene22966:CDS |
| GTTCTTGTATGGAGAGTCCA+TGG | 0.446963 | 7.3:+6161546 | MS.gene22966:CDS |
| AATTGGATGTGTAGAATCAT+AGG | 0.453394 | 7.3:-6163118 | None:intergenic |
| GCTGGTTCTTAACATTTCTA+GGG | 0.456674 | 7.3:-6162144 | None:intergenic |
| CTCACCCTTTCTCGTTTGGC+CGG | 0.464749 | 7.3:-6161938 | None:intergenic |
| TGAAAAGTTGCACTCCCCTT+GGG | 0.467830 | 7.3:-6157789 | None:intergenic |
| GGAAAAGCTAGGTTCTTGTA+TGG | 0.474126 | 7.3:+6161535 | MS.gene22966:CDS |
| GTGAAAAGTTGCACTCCCCT+TGG | 0.475498 | 7.3:-6157790 | None:intergenic |
| AGAGCCTTTGGAGAACATAA+TGG | 0.478092 | 7.3:-6157826 | None:intergenic |
| AAGATCCGGCCAAACGAGAA+AGG | 0.479104 | 7.3:+6161933 | MS.gene22966:CDS |
| AGTTATCTTTGTGGCTTGAA+AGG | 0.484287 | 7.3:+6163222 | MS.gene22966:CDS |
| TGACAGACCCAGAAGTAAGC+AGG | 0.496194 | 7.3:+6162944 | MS.gene22966:CDS |
| GTCTTTGCTGATGATACAAC+TGG | 0.500765 | 7.3:-6163174 | None:intergenic |
| AGAATCATAGGCAGCATTGT+TGG | 0.502217 | 7.3:-6163106 | None:intergenic |
| GTGGGAACTATCTTCCACTT+TGG | 0.507430 | 7.3:-6161884 | None:intergenic |
| ATGTGGCATGGTTTAACATC+TGG | 0.519462 | 7.3:+6163021 | MS.gene22966:CDS |
| TGATATACCAGGACAAGCCC+AGG | 0.533416 | 7.3:+6162111 | MS.gene22966:CDS |
| AGATCCGGCCAAACGAGAAA+GGG | 0.539898 | 7.3:+6161934 | MS.gene22966:CDS |
| AAATTGATGACATCCTTTGT+GGG | 0.543046 | 7.3:-6161902 | None:intergenic |
| ATCTGTTGCAGGTTATGGCA+TGG | 0.558684 | 7.3:+6158142 | MS.gene22966:intron |
| GGTGTCTTCAAGATTCATGC+TGG | 0.560620 | 7.3:-6162162 | None:intergenic |
| TCTTGAAGACACCTTATACA+AGG | 0.565278 | 7.3:+6162172 | MS.gene22966:CDS |
| TTAAACCATGCCACATTCCA+GGG | 0.567753 | 7.3:-6163014 | None:intergenic |
| TACAACGTGTACCTTACACA+TGG | 0.570866 | 7.3:-6161638 | None:intergenic |
| AGGAGTTCTGGAGGAACCCA+AGG | 0.572295 | 7.3:+6157773 | MS.gene22966:intron |
| GACAGACCCAGAAGTAAGCA+GGG | 0.576720 | 7.3:+6162945 | MS.gene22966:CDS |
| TGTGCCAAATATGCTGTGTA+TGG | 0.584688 | 7.3:+6161304 | MS.gene22966:CDS |
| AAGAGTATAAGGGAAAAGCT+AGG | 0.585965 | 7.3:+6161524 | MS.gene22966:CDS |
| TAGACTAACTGCTCCACCCA+TGG | 0.587925 | 7.3:-6161563 | None:intergenic |
| TTTCATTCTAATTTGCTGAG+TGG | 0.595665 | 7.3:-6163260 | None:intergenic |
| CCTTACACATGGGCGCGACA+AGG | 0.597684 | 7.3:-6161627 | None:intergenic |
| GTTGCCATTATGTTCTCCAA+AGG | 0.597843 | 7.3:+6157822 | MS.gene22966:CDS |
| TTCTTGTATGGAGAGTCCAT+GGG | 0.602502 | 7.3:+6161547 | MS.gene22966:CDS |
| GAGTGCAGTCGTTTCATGAG+AGG | 0.608720 | 7.3:+6158164 | MS.gene22966:CDS |
| GAAGGACATGGACAATCTGA+AGG | 0.609980 | 7.3:+6161337 | MS.gene22966:CDS |
| TTGTATGGAGAGTCCATGGG+TGG | 0.611978 | 7.3:+6161550 | MS.gene22966:CDS |
| TTGAAGATATCATACCAAAG+TGG | 0.612746 | 7.3:+6161870 | MS.gene22966:CDS |
| TTAAATTGTACCCTGGAATG+TGG | 0.615904 | 7.3:+6163004 | MS.gene22966:CDS |
| ACAACGTGTACCTTACACAT+GGG | 0.623130 | 7.3:-6161637 | None:intergenic |
| TCAATATGTTGATGACAACT+TGG | 0.624135 | 7.3:-6161841 | None:intergenic |
| GTGTCAATGTCTCATTGTCA+TGG | 0.624411 | 7.3:-6163152 | None:intergenic |
| AAGACAATTAAATTGTACCC+TGG | 0.629319 | 7.3:+6162997 | MS.gene22966:CDS |
| GTGTATGGTGTAGATTATGA+AGG | 0.634571 | 7.3:+6161319 | MS.gene22966:CDS |
| GGTGTAGATTATGAAGGACA+TGG | 0.638840 | 7.3:+6161325 | MS.gene22966:CDS |
| TTGTACCCTGGAATGTGGCA+TGG | 0.642467 | 7.3:+6163009 | MS.gene22966:CDS |
| GGAGTTCTGGAGGAACCCAA+GGG | 0.647003 | 7.3:+6157774 | MS.gene22966:intron |
| ACATGCATCAGGAGTTCTGG+AGG | 0.672710 | 7.3:+6157764 | MS.gene22966:intron |
| GTGGAAGATAGTTCCCACAA+AGG | 0.681811 | 7.3:+6161889 | MS.gene22966:CDS |
| ATGTTGATGACAACTTGGTG+TGG | 0.690265 | 7.3:-6161836 | None:intergenic |
| GTACTACAGAATGTGGAGTG+CGG | 0.724286 | 7.3:+6161275 | MS.gene22966:intron |
| GAGTTCTGGAGGAACCCAAG+GGG | 0.724868 | 7.3:+6157775 | MS.gene22966:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAACATATAGAATTA+TGG | + | chr7.3:6160819-6160838 | MS.gene22966:intron | 10.0% |
| !! | AAAAAAACATATAGAATTAT+GGG | + | chr7.3:6160820-6160839 | MS.gene22966:intron | 10.0% |
| !! | AAAATGTATTATTATCTATA+CGG | - | chr7.3:6158839-6158858 | None:intergenic | 10.0% |
| !! | AAAATGTATTATTATCTATA+TGG | - | chr7.3:6158839-6158858 | None:intergenic | 10.0% |
| !! | AAATGTATTATTATCTATAT+GGG | - | chr7.3:6158838-6158857 | None:intergenic | 10.0% |
| !! | AATTAGAGATAAATAAAATT+TGG | - | chr7.3:6158074-6158093 | None:intergenic | 10.0% |
| !! | AATTATAATAAATAAAGAAG+GGG | - | chr7.3:6158537-6158556 | None:intergenic | 10.0% |
| !! | ATAAAAAAAAATCTTAAATG+AGG | - | chr7.3:6160427-6160446 | None:intergenic | 10.0% |
| !! | ATAAAGATTAAAACAATAAA+AGG | + | chr7.3:6158577-6158596 | MS.gene22966:intron | 10.0% |
| !! | ATTAGAGATAAATAAAATTT+GGG | - | chr7.3:6158073-6158092 | None:intergenic | 10.0% |
| !! | GCTAATTAATATTAATATTA+TGG | + | chr7.3:6157721-6157740 | MS.gene22966:intron | 10.0% |
| !! | TGTAAAAAAAAAAATCTATA+TGG | - | chr7.3:6158809-6158828 | None:intergenic | 10.0% |
| !! | TTTCAAAAAAAAAAAAAGTA+TGG | - | chr7.3:6160511-6160530 | None:intergenic | 10.0% |
| !!! | AAAAATAGTTTATCATTTTT+TGG | - | chr7.3:6160750-6160769 | None:intergenic | 10.0% |
| !!! | AGTTTAAATTTTTTATGAAA+TGG | + | chr7.3:6157648-6157667 | MS.gene22966:intron | 10.0% |
| !!! | ATACTTTTTTTTTTTTTGAA+AGG | + | chr7.3:6160510-6160529 | MS.gene22966:intron | 10.0% |
| !!! | ATATAGATAATAATACATTT+TGG | + | chr7.3:6158838-6158857 | MS.gene22966:intron | 10.0% |
| !!! | ATGGTTAATTTTTTTTTTTT+GGG | + | chr7.3:6161113-6161132 | MS.gene22966:intron | 10.0% |
| !!! | TGTCTATTAATAAAATTTTA+TGG | + | chr7.3:6157879-6157898 | MS.gene22966:intron | 10.0% |
| !!! | TTTAATTGATTTTACATTTA+GGG | + | chr7.3:6160034-6160053 | MS.gene22966:intron | 10.0% |
| !!! | TTTTAATTGATTTTACATTT+AGG | + | chr7.3:6160033-6160052 | MS.gene22966:intron | 10.0% |
| !!! | TTTTATTGTTTTAATCTTTA+TGG | - | chr7.3:6158578-6158597 | None:intergenic | 10.0% |
| !!! | TTTTATTTAATCTATAATTG+AGG | + | chr7.3:6161997-6162016 | MS.gene22966:intron | 10.0% |
| !! | AAATGTATTATTATCTATAC+GGG | - | chr7.3:6158873-6158892 | None:intergenic | 15.0% |
| !! | AATATTTAATCAATACAGTT+TGG | + | chr7.3:6160578-6160597 | MS.gene22966:intron | 15.0% |
| !! | ATATGGATTTATAATTAACT+TGG | - | chr7.3:6161733-6161752 | None:intergenic | 15.0% |
| !! | ATTAAAATTTAAACATGCTT+TGG | + | chr7.3:6159314-6159333 | MS.gene22966:intron | 15.0% |
| !! | TAAACAATTTAACGTTTATT+TGG | - | chr7.3:6162750-6162769 | None:intergenic | 15.0% |
| !! | TTAAAATTTAAACATGCTTT+GGG | + | chr7.3:6159315-6159334 | MS.gene22966:intron | 15.0% |
| !! | TTCAAATATAACCAAAAAAA+GGG | - | chr7.3:6158251-6158270 | None:intergenic | 15.0% |
| !!! | ATTTCTCTAAAAAAAATTGA+TGG | - | chr7.3:6158721-6158740 | None:intergenic | 15.0% |
| !!! | CATGGTTAATTTTTTTTTTT+TGG | + | chr7.3:6161112-6161131 | MS.gene22966:intron | 15.0% |
| !!! | GTACTAGTTTAATTTTATAA+TGG | + | chr7.3:6159738-6159757 | MS.gene22966:intron | 15.0% |
| !!! | GTATAGATAATAATACATTT+TGG | + | chr7.3:6158873-6158892 | MS.gene22966:intron | 15.0% |
| !!! | TATTTCAAATTTTCCTTTTT+TGG | + | chr7.3:6158010-6158029 | MS.gene22966:intron | 15.0% |
| !!! | TCATATGCATATTTTTTTTA+AGG | + | chr7.3:6159215-6159234 | MS.gene22966:intron | 15.0% |
| !!! | TGAAATTTTTCTTTGAAATT+TGG | + | chr7.3:6160085-6160104 | MS.gene22966:intron | 15.0% |
| !!! | TTTTCTAAACAAAAAGTATA+TGG | - | chr7.3:6161750-6161769 | None:intergenic | 15.0% |
| !! | AAAATCAATCCTATTCAAAA+AGG | - | chr7.3:6162560-6162579 | None:intergenic | 20.0% |
| !! | AAAATTCGTCATCTAATAAA+TGG | - | chr7.3:6159817-6159836 | None:intergenic | 20.0% |
| !! | AAACAGTTATCGTAAAAAAA+TGG | - | chr7.3:6158676-6158695 | None:intergenic | 20.0% |
| !! | AAGATAGACTTAAATCTTTA+TGG | + | chr7.3:6159532-6159551 | MS.gene22966:intron | 20.0% |
| !! | AATGAATGATGAAACTATAA+TGG | - | chr7.3:6161482-6161501 | None:intergenic | 20.0% |
| !! | ACAATAAAAGGAATAATTCT+AGG | + | chr7.3:6158589-6158608 | MS.gene22966:intron | 20.0% |
| !! | AGTACTATAGATATATGTTT+AGG | + | chr7.3:6161219-6161238 | MS.gene22966:intron | 20.0% |
| !! | ATTGTTCTACAAATTTACTT+AGG | - | chr7.3:6160662-6160681 | None:intergenic | 20.0% |
| !! | CATATCATACCTAATTTATT+TGG | + | chr7.3:6162854-6162873 | MS.gene22966:intron | 20.0% |
| !! | CATTTCTTATGAAGTAATTA+AGG | + | chr7.3:6160970-6160989 | MS.gene22966:intron | 20.0% |
| !! | CTTCAAATATAACCAAAAAA+AGG | - | chr7.3:6158252-6158271 | None:intergenic | 20.0% |
| !! | GGATTTACATAAAACAAAAA+GGG | - | chr7.3:6158507-6158526 | None:intergenic | 20.0% |
| !! | GTAAAAAATCTTTACATTAC+AGG | + | chr7.3:6161699-6161718 | MS.gene22966:intron | 20.0% |
| !! | GTACTATAGATATATGTTTA+GGG | + | chr7.3:6161220-6161239 | MS.gene22966:intron | 20.0% |
| !! | GTTTAAAGGAAATAAACTAA+GGG | + | chr7.3:6158275-6158294 | MS.gene22966:intron | 20.0% |
| !! | GTTTGGAAAATAGAATAAAT+TGG | + | chr7.3:6160595-6160614 | MS.gene22966:intron | 20.0% |
| !! | TAAAACAAAAAGGGTAATAA+TGG | - | chr7.3:6158498-6158517 | None:intergenic | 20.0% |
| !! | TAAAATTTAAACATGCTTTG+GGG | + | chr7.3:6159316-6159335 | MS.gene22966:intron | 20.0% |
| !! | TAAATGTAAAATGACAACAA+AGG | - | chr7.3:6159031-6159050 | None:intergenic | 20.0% |
| !! | TATTACCTCAAAAATCTATA+TGG | - | chr7.3:6158784-6158803 | None:intergenic | 20.0% |
| !! | TCAAATATAACCAAAAAAAG+GGG | - | chr7.3:6158250-6158269 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAGTATGGTATGT+TGG | - | chr7.3:6160503-6160522 | None:intergenic | 20.0% |
| !!! | AAAATCAAACTATTTTCACT+GGG | - | chr7.3:6157612-6157631 | None:intergenic | 20.0% |
| !!! | AATTTTTCTTTGAAATTTGG+TGG | + | chr7.3:6160088-6160107 | MS.gene22966:intron | 20.0% |
| !!! | ACTTATTTCTATAAATTCTC+CGG | + | chr7.3:6162366-6162385 | MS.gene22966:intron | 20.0% |
| !!! | ACTTATTTGAACTTTTTTTG+AGG | + | chr7.3:6162252-6162271 | MS.gene22966:intron | 20.0% |
| !!! | AGAGAGATATATTTACATTT+TGG | + | chr7.3:6160007-6160026 | MS.gene22966:intron | 20.0% |
| !!! | ATAAGACACATTTTTTTCTA+AGG | - | chr7.3:6161154-6161173 | None:intergenic | 20.0% |
| !!! | ATAATCAAGTTACCTTTTTT+CGG | + | chr7.3:6162783-6162802 | MS.gene22966:intron | 20.0% |
| !!! | ATATTCCATATAGATTTTTG+AGG | + | chr7.3:6158776-6158795 | MS.gene22966:intron | 20.0% |
| !!! | ATCACTTTTAGTTTTTGTTA+CGG | + | chr7.3:6162719-6162738 | MS.gene22966:intron | 20.0% |
| !!! | ATTTTCTCATGAAAAATTCA+TGG | + | chr7.3:6161094-6161113 | MS.gene22966:intron | 20.0% |
| !!! | CAAATTGTTTTTCTTTTAAC+CGG | + | chr7.3:6162531-6162550 | MS.gene22966:intron | 20.0% |
| !!! | CTTATTTGAACTTTTTTTGA+GGG | + | chr7.3:6162253-6162272 | MS.gene22966:intron | 20.0% |
| !!! | GTGTTAATTTGAATATTTGT+TGG | - | chr7.3:6162813-6162832 | None:intergenic | 20.0% |
| !!! | TAATTTTAAGTATGGTATGT+TGG | - | chr7.3:6160537-6160556 | None:intergenic | 20.0% |
| !!! | TAGCATAGTAATTTTAAGTA+TGG | - | chr7.3:6160545-6160564 | None:intergenic | 20.0% |
| !!! | TCATATAAATAAGAGTATTG+TGG | - | chr7.3:6160175-6160194 | None:intergenic | 20.0% |
| !!! | TCTTTTTTGAACAAGAAAAA+TGG | - | chr7.3:6159990-6160009 | None:intergenic | 20.0% |
| !!! | TTCTTTTTACAATTTGAAAG+TGG | + | chr7.3:6160213-6160232 | MS.gene22966:intron | 20.0% |
| !!! | TTTTTCTTTCTTTTTTTGAG+AGG | - | chr7.3:6159509-6159528 | None:intergenic | 20.0% |
| !!! | TTTTTGGTTATATTTGAAGT+CGG | + | chr7.3:6158253-6158272 | MS.gene22966:intron | 20.0% |
| ! | AAAACATATAGAATTATGGG+AGG | + | chr7.3:6160823-6160842 | MS.gene22966:intron | 25.0% |
| ! | AAACATATAGAATTATGGGA+GGG | + | chr7.3:6160824-6160843 | MS.gene22966:intron | 25.0% |
| ! | AAATAAAGAAGGGGTAAAAA+CGG | - | chr7.3:6158528-6158547 | None:intergenic | 25.0% |
| ! | AAATATAACCAAAAAAAGGG+GGG | - | chr7.3:6158248-6158267 | None:intergenic | 25.0% |
| ! | AAATTTAAACTCCGTTCATA+AGG | - | chr7.3:6157639-6157658 | None:intergenic | 25.0% |
| ! | AACAAAATTCATCACTTAGT+TGG | - | chr7.3:6159848-6159867 | None:intergenic | 25.0% |
| ! | AACCCTGAAAAAACAAAATA+TGG | + | chr7.3:6160912-6160931 | MS.gene22966:intron | 25.0% |
| ! | AATACAAATGAGCACTAATT+TGG | + | chr7.3:6159638-6159657 | MS.gene22966:intron | 25.0% |
| ! | AATGTGAATCACTTTATGTT+TGG | - | chr7.3:6162695-6162714 | None:intergenic | 25.0% |
| ! | ACCTAATTTATTTGGTACTT+TGG | + | chr7.3:6162862-6162881 | MS.gene22966:intron | 25.0% |
| ! | ATGCAATACAAAAAATGGAA+AGG | - | chr7.3:6162908-6162927 | None:intergenic | 25.0% |
| ! | CAAATATAACCAAAAAAAGG+GGG | - | chr7.3:6158249-6158268 | None:intergenic | 25.0% |
| ! | CCTAATTTATTTGGTACTTT+GGG | + | chr7.3:6162863-6162882 | MS.gene22966:intron | 25.0% |
| ! | CGGATTTACATAAAACAAAA+AGG | - | chr7.3:6158508-6158527 | None:intergenic | 25.0% |
| ! | CGGTTAAAAGAAAAACAATT+TGG | - | chr7.3:6162533-6162552 | None:intergenic | 25.0% |
| ! | GGCTAAAAATCAAAATTTAG+AGG | - | chr7.3:6162629-6162648 | None:intergenic | 25.0% |
| ! | GGTTTAAAGGAAATAAACTA+AGG | + | chr7.3:6158274-6158293 | MS.gene22966:intron | 25.0% |
| ! | TTCAGATATATTTACGAGAA+AGG | - | chr7.3:6161975-6161994 | None:intergenic | 25.0% |
| ! | TTGATTGATAAACAAGTTAC+TGG | - | chr7.3:6158204-6158223 | None:intergenic | 25.0% |
| ! | TTTCATTAAATATCTGTTGC+AGG | + | chr7.3:6158131-6158150 | MS.gene22966:intron | 25.0% |
| ! | TTTGACAAAAAAACTCTGTT+TGG | + | chr7.3:6158350-6158369 | MS.gene22966:intron | 25.0% |
| !! | AAGTTAGAATCAATTTTGGA+AGG | - | chr7.3:6162583-6162602 | None:intergenic | 25.0% |
| !! | CAAAATCAAACTATTTTCAC+TGG | - | chr7.3:6157613-6157632 | None:intergenic | 25.0% |
| !! | CATTTGTATTCTTTTCTCAT+TGG | - | chr7.3:6159628-6159647 | None:intergenic | 25.0% |
| !! | TATATTTGAAGTCGGTTTAA+AGG | + | chr7.3:6158261-6158280 | MS.gene22966:intron | 25.0% |
| !! | TGATTTTGTAACCTTATGAA+CGG | + | chr7.3:6157625-6157644 | MS.gene22966:intron | 25.0% |
| !!! | AATTCTAGGATGTTTTTTCA+GGG | + | chr7.3:6158603-6158622 | MS.gene22966:intron | 25.0% |
| !!! | CTTATTTCTATAAATTCTCC+GGG | + | chr7.3:6162367-6162386 | MS.gene22966:intron | 25.0% |
| !!! | CTTCAAGTTAGAATCAATTT+TGG | - | chr7.3:6162587-6162606 | None:intergenic | 25.0% |
| !!! | GTGTATGTTTGTTTCTATTT+TGG | + | chr7.3:6162501-6162520 | MS.gene22966:intron | 25.0% |
| !!! | TAATTCTAGGATGTTTTTTC+AGG | + | chr7.3:6158602-6158621 | MS.gene22966:intron | 25.0% |
| !!! | TATGTTTGTTTCTATTTTGG+AGG | + | chr7.3:6162504-6162523 | MS.gene22966:intron | 25.0% |
| !!! | TGCCATATTTTGTTTTTTCA+GGG | - | chr7.3:6160917-6160936 | None:intergenic | 25.0% |
| !!! | TTGTGCATTTTTTTTCCAAT+CGG | - | chr7.3:6159678-6159697 | None:intergenic | 25.0% |
| !!! | TTTCCATTTTTTGTATTGCA+TGG | + | chr7.3:6162907-6162926 | MS.gene22966:CDS | 25.0% |
| !!! | TTTTTGAAGACATCATAACA+TGG | + | chr7.3:6163070-6163089 | MS.gene22966:CDS | 25.0% |
| AAATAAACTAAGGGTCTGTT+TGG | + | chr7.3:6158284-6158303 | MS.gene22966:intron | 30.0% | |
| AACATATAGAATTATGGGAG+GGG | + | chr7.3:6160825-6160844 | MS.gene22966:intron | 30.0% | |
| AAGACAATTAAATTGTACCC+TGG | + | chr7.3:6162997-6163016 | MS.gene22966:CDS | 30.0% | |
| AATATAACCAAAAAAAGGGG+GGG | - | chr7.3:6158247-6158266 | None:intergenic | 30.0% | |
| AATGAGCACTAATTTGGTAA+CGG | + | chr7.3:6159644-6159663 | MS.gene22966:intron | 30.0% | |
| AATGGATGTCTACCTATATT+TGG | + | chr7.3:6159756-6159775 | MS.gene22966:intron | 30.0% | |
| AATTGGATGTGTAGAATCAT+AGG | - | chr7.3:6163121-6163140 | None:intergenic | 30.0% | |
| AATTTATTTGGTACTTTGGG+TGG | + | chr7.3:6162866-6162885 | MS.gene22966:intron | 30.0% | |
| ACTCTGTTTGGTAAAAATAG+CGG | - | chr7.3:6159186-6159205 | None:intergenic | 30.0% | |
| AGACAGTGAATTAATTACCA+TGG | - | chr7.3:6157864-6157883 | None:intergenic | 30.0% | |
| AGACTATGAAACAATCTCAT+AGG | + | chr7.3:6163193-6163212 | MS.gene22966:CDS | 30.0% | |
| CTAGTTAAGGAATCCAAAAA+AGG | - | chr7.3:6158026-6158045 | None:intergenic | 30.0% | |
| GCTGAACTAAAACCAAATAT+AGG | - | chr7.3:6159771-6159790 | None:intergenic | 30.0% | |
| GGTTTATCTCTAGCTAATTA+TGG | + | chr7.3:6161241-6161260 | MS.gene22966:intron | 30.0% | |
| TAAATATCTGTTGCAGGTTA+TGG | + | chr7.3:6158137-6158156 | MS.gene22966:intron | 30.0% | |
| TAACGACTACATATTGAGTT+GGG | - | chr7.3:6160332-6160351 | None:intergenic | 30.0% | |
| TACACTCAAAAGATTAGACA+AGG | - | chr7.3:6161448-6161467 | None:intergenic | 30.0% | |
| TATATTCTTAGAGTACGAGA+AGG | + | chr7.3:6161171-6161190 | MS.gene22966:intron | 30.0% | |
| TATTATGTTTATGTGTTCCG+AGG | + | chr7.3:6157568-6157587 | MS.gene22966:intron | 30.0% | |
| TCTATATGTGTTATCAACGA+CGG | - | chr7.3:6158747-6158766 | None:intergenic | 30.0% | |
| TCTCCATGCAATACAAAAAA+TGG | - | chr7.3:6162913-6162932 | None:intergenic | 30.0% | |
| TGCATAGTTAACCTTGTATA+AGG | - | chr7.3:6162186-6162205 | None:intergenic | 30.0% | |
| TTATATACGTAACATGCATC+AGG | + | chr7.3:6157753-6157772 | MS.gene22966:intron | 30.0% | |
| TTGAAGATATCATACCAAAG+TGG | + | chr7.3:6161870-6161889 | MS.gene22966:CDS | 30.0% | |
| ! | AAAATTGATGACATCCTTTG+TGG | - | chr7.3:6161906-6161925 | None:intergenic | 30.0% |
| ! | AAATTGATGACATCCTTTGT+GGG | - | chr7.3:6161905-6161924 | None:intergenic | 30.0% |
| ! | CCCAAAGTACCAAATAAATT+AGG | - | chr7.3:6162866-6162885 | None:intergenic | 30.0% |
| ! | CTATAAGCTATAAGCTCTTT+TGG | - | chr7.3:6158318-6158337 | None:intergenic | 30.0% |
| ! | GAAGTGTTTGGTAAAATTAG+CGG | - | chr7.3:6159067-6159086 | None:intergenic | 30.0% |
| ! | TGAGTTGAACAAGAAAATTG+AGG | - | chr7.3:6162650-6162669 | None:intergenic | 30.0% |
| ! | TTACTTGTCAGTTTTCTAGA+AGG | + | chr7.3:6159589-6159608 | MS.gene22966:intron | 30.0% |
| ! | TTTTCTCTCTCTATCTTAGA+AGG | + | chr7.3:6158092-6158111 | MS.gene22966:intron | 30.0% |
| !! | GAAAAACAAGTTGATATACC+AGG | + | chr7.3:6162100-6162119 | MS.gene22966:CDS | 30.0% |
| !! | TAGTCTACTTTTGCATCAAA+AGG | + | chr7.3:6161579-6161598 | MS.gene22966:CDS | 30.0% |
| !! | TCAATATGTTGATGACAACT+TGG | - | chr7.3:6161844-6161863 | None:intergenic | 30.0% |
| !! | TCGTTGATAACACATATAGA+TGG | + | chr7.3:6158747-6158766 | MS.gene22966:intron | 30.0% |
| !! | TGATTTGTTTAGACTCTGTT+TGG | - | chr7.3:6159198-6159217 | None:intergenic | 30.0% |
| !!! | ACTTTTTCAATGTTGTCATC+TGG | - | chr7.3:6163051-6163070 | None:intergenic | 30.0% |
| !!! | ATTGCACTTCTTTTTTGACA+AGG | - | chr7.3:6158650-6158669 | None:intergenic | 30.0% |
| !!! | CTGCCATATTTTGTTTTTTC+AGG | - | chr7.3:6160918-6160937 | None:intergenic | 30.0% |
| AAATGCTCATGTCGTCAAAT+TGG | + | chr7.3:6159256-6159275 | MS.gene22966:intron | 35.0% | |
| AAATGTTAACCAATGTCCCT+TGG | + | chr7.3:6157903-6157922 | MS.gene22966:intron | 35.0% | |
| AATGTTAACCAATGTCCCTT+GGG | + | chr7.3:6157904-6157923 | MS.gene22966:intron | 35.0% | |
| ACATAATGGCAACCATTTAC+AGG | - | chr7.3:6157815-6157834 | None:intergenic | 35.0% | |
| ACATATAGAATTATGGGAGG+GGG | + | chr7.3:6160826-6160845 | MS.gene22966:intron | 35.0% | |
| AGCTAATTATGGTAGCATGA+TGG | + | chr7.3:6161252-6161271 | MS.gene22966:intron | 35.0% | |
| AGGCGAAAAAGTTATCTTTG+TGG | + | chr7.3:6163213-6163232 | MS.gene22966:CDS | 35.0% | |
| AGTTATCTTTGTGGCTTGAA+AGG | + | chr7.3:6163222-6163241 | MS.gene22966:CDS | 35.0% | |
| CTAATAAATGGACACCAGAT+CGG | - | chr7.3:6159805-6159824 | None:intergenic | 35.0% | |
| GCTAATTATGGTAGCATGAT+GGG | + | chr7.3:6161253-6161272 | MS.gene22966:intron | 35.0% | |
| GGAACAGTTTAACAGTAAGA+AGG | + | chr7.3:6161017-6161036 | MS.gene22966:intron | 35.0% | |
| GTAACGACTACATATTGAGT+TGG | - | chr7.3:6160333-6160352 | None:intergenic | 35.0% | |
| GTGTATGGTGTAGATTATGA+AGG | + | chr7.3:6161319-6161338 | MS.gene22966:CDS | 35.0% | |
| TACACCATACACAGCATATT+TGG | - | chr7.3:6161311-6161330 | None:intergenic | 35.0% | |
| TATACCACTTCCTTTGACAA+TGG | + | chr7.3:6162066-6162085 | MS.gene22966:intron | 35.0% | |
| TCATGGTTACAAGTCTCAAT+TGG | - | chr7.3:6163138-6163157 | None:intergenic | 35.0% | |
| TCTTGAAGACACCTTATACA+AGG | + | chr7.3:6162172-6162191 | MS.gene22966:CDS | 35.0% | |
| TTAAATTGTACCCTGGAATG+TGG | + | chr7.3:6163004-6163023 | MS.gene22966:CDS | 35.0% | |
| TTATCTGCAACCATTGTCAA+AGG | - | chr7.3:6162079-6162098 | None:intergenic | 35.0% | |
| TTTAACAGTAAGAAGGACGA+TGG | + | chr7.3:6161024-6161043 | MS.gene22966:intron | 35.0% | |
| TTTGACAATGGTTGCAGATA+AGG | + | chr7.3:6162078-6162097 | MS.gene22966:intron | 35.0% | |
| ! | AAGAGTATAAGGGAAAAGCT+AGG | + | chr7.3:6161524-6161543 | MS.gene22966:CDS | 35.0% |
| ! | ACGATGGTTGTTTGTGTTTT+TGG | + | chr7.3:6161040-6161059 | MS.gene22966:intron | 35.0% |
| ! | ATCAAAAGGACCCTTCTTTT+TGG | + | chr7.3:6161593-6161612 | MS.gene22966:CDS | 35.0% |
| ! | CAATTTTGCCTTCAAAGATC+CGG | + | chr7.3:6161919-6161938 | MS.gene22966:CDS | 35.0% |
| ! | CTGACACTAGATTTTTCGTT+GGG | - | chr7.3:6160864-6160883 | None:intergenic | 35.0% |
| ! | GATAAGCTAGTTGAAGTGTT+TGG | - | chr7.3:6159079-6159098 | None:intergenic | 35.0% |
| ! | GCTGGTTCTTAACATTTCTA+GGG | - | chr7.3:6162147-6162166 | None:intergenic | 35.0% |
| ! | GTATTCTTTTCTCATTGGAG+AGG | - | chr7.3:6159623-6159642 | None:intergenic | 35.0% |
| ! | TAAGCATTGTTGAGACTGTT+TGG | + | chr7.3:6162305-6162324 | MS.gene22966:intron | 35.0% |
| ! | TAAGCTATAAGCTCTTTTGG+TGG | - | chr7.3:6158315-6158334 | None:intergenic | 35.0% |
| ! | TAGCTTTTCCCTTATACTCT+TGG | - | chr7.3:6161525-6161544 | None:intergenic | 35.0% |
| ! | TCAAAAGGACCCTTCTTTTT+GGG | + | chr7.3:6161594-6161613 | MS.gene22966:CDS | 35.0% |
| ! | TCAGTTCTCCAAGAGTATAA+GGG | + | chr7.3:6161514-6161533 | MS.gene22966:intron | 35.0% |
| ! | TGCAACTTTTCACCTGTAAA+TGG | + | chr7.3:6157800-6157819 | MS.gene22966:CDS | 35.0% |
| ! | TTCAGTTCTCCAAGAGTATA+AGG | + | chr7.3:6161513-6161532 | MS.gene22966:intron | 35.0% |
| ! | TTCGTACACCATTTTCTGAT+GGG | - | chr7.3:6160248-6160267 | None:intergenic | 35.0% |
| ! | TTTCAAGTCAGTTAGTGGTA+TGG | + | chr7.3:6161414-6161433 | MS.gene22966:intron | 35.0% |
| ! | TTTCGTACACCATTTTCTGA+TGG | - | chr7.3:6160249-6160268 | None:intergenic | 35.0% |
| !! | ATCCTATTCAAAAAGGCATC+CGG | - | chr7.3:6162553-6162572 | None:intergenic | 35.0% |
| !! | TATAACTCGTGAAAGTACCT+CGG | - | chr7.3:6157588-6157607 | None:intergenic | 35.0% |
| !! | TCCGGGATAACTTTTGAAAA+CGG | + | chr7.3:6162384-6162403 | MS.gene22966:intron | 35.0% |
| !! | TGCTGGTTCTTAACATTTCT+AGG | - | chr7.3:6162148-6162167 | None:intergenic | 35.0% |
| !!! | GACTTTTTCAAGTCAGTTAG+TGG | + | chr7.3:6161409-6161428 | MS.gene22966:CDS | 35.0% |
| !!! | TGCATTTTTTTTCCAATCGG+AGG | - | chr7.3:6159675-6159694 | None:intergenic | 35.0% |
| AAAAAGGGGGGGAATAGAAA+AGG | - | chr7.3:6158236-6158255 | None:intergenic | 40.0% | |
| AACTAAGGGTCTGTTTGGTA+AGG | + | chr7.3:6158289-6158308 | MS.gene22966:intron | 40.0% | |
| ACAACGTGTACCTTACACAT+GGG | - | chr7.3:6161640-6161659 | None:intergenic | 40.0% | |
| ACACCAGATCGGTATCTTTA+TGG | - | chr7.3:6159794-6159813 | None:intergenic | 40.0% | |
| AGAATCATAGGCAGCATTGT+TGG | - | chr7.3:6163109-6163128 | None:intergenic | 40.0% | |
| ATAATGCCCTGCTTACTTCT+GGG | - | chr7.3:6162954-6162973 | None:intergenic | 40.0% | |
| ATACCCTGAAGTTCTGTTGT+TGG | - | chr7.3:6160062-6160081 | None:intergenic | 40.0% | |
| ATGTGGCATGGTTTAACATC+TGG | + | chr7.3:6163021-6163040 | MS.gene22966:CDS | 40.0% | |
| ATTATGTTCTCCAAAGGCTC+TGG | + | chr7.3:6157828-6157847 | MS.gene22966:CDS | 40.0% | |
| CAAAGAAAAACCAGAGCCTT+TGG | - | chr7.3:6157841-6157860 | None:intergenic | 40.0% | |
| CACCAGATCGGTATCTTTAT+GGG | - | chr7.3:6159793-6159812 | None:intergenic | 40.0% | |
| CGAAAAATCTAGTGTCAGCT+TGG | + | chr7.3:6160866-6160885 | MS.gene22966:intron | 40.0% | |
| GGAAAAGCTAGGTTCTTGTA+TGG | + | chr7.3:6161535-6161554 | MS.gene22966:CDS | 40.0% | |
| GGTGTAGATTATGAAGGACA+TGG | + | chr7.3:6161325-6161344 | MS.gene22966:CDS | 40.0% | |
| GTACCAACAACAGAACTTCA+GGG | + | chr7.3:6160056-6160075 | MS.gene22966:intron | 40.0% | |
| GTCTTTGCTGATGATACAAC+TGG | - | chr7.3:6163177-6163196 | None:intergenic | 40.0% | |
| GTGGGAATGGTTTAATGGTA+GGG | - | chr7.3:6160283-6160302 | None:intergenic | 40.0% | |
| GTGTCAATGTCTCATTGTCA+TGG | - | chr7.3:6163155-6163174 | None:intergenic | 40.0% | |
| GTTGCCATTATGTTCTCCAA+AGG | + | chr7.3:6157822-6157841 | MS.gene22966:CDS | 40.0% | |
| TACAACGTGTACCTTACACA+TGG | - | chr7.3:6161641-6161660 | None:intergenic | 40.0% | |
| TATAATGCCCTGCTTACTTC+TGG | - | chr7.3:6162955-6162974 | None:intergenic | 40.0% | |
| TCATGAGAAAATGTGACGAC+AGG | - | chr7.3:6161086-6161105 | None:intergenic | 40.0% | |
| TCTTCGTGGGAATGGTTTAA+TGG | - | chr7.3:6160288-6160307 | None:intergenic | 40.0% | |
| TGTATAGACGTGTCTCAAGT+AGG | + | chr7.3:6160377-6160396 | MS.gene22966:intron | 40.0% | |
| TGTGCCAAATATGCTGTGTA+TGG | + | chr7.3:6161304-6161323 | MS.gene22966:CDS | 40.0% | |
| TTAAACCATGCCACATTCCA+GGG | - | chr7.3:6163017-6163036 | None:intergenic | 40.0% | |
| TTCTTGTATGGAGAGTCCAT+GGG | + | chr7.3:6161547-6161566 | MS.gene22966:CDS | 40.0% | |
| TTTCCTTAACCAATGCCCAA+GGG | - | chr7.3:6157922-6157941 | None:intergenic | 40.0% | |
| TTTGTTGGCAAGCCGAAAAA+AGG | - | chr7.3:6162798-6162817 | None:intergenic | 40.0% | |
| ! | AACCGGATGCCTTTTTGAAT+AGG | + | chr7.3:6162548-6162567 | MS.gene22966:intron | 40.0% |
| ! | AGAGCCTTTGGAGAACATAA+TGG | - | chr7.3:6157829-6157848 | None:intergenic | 40.0% |
| ! | GATCTAGAATGATCGTTGGT+TGG | + | chr7.3:6160943-6160962 | MS.gene22966:intron | 40.0% |
| ! | GCTGACACTAGATTTTTCGT+TGG | - | chr7.3:6160865-6160884 | None:intergenic | 40.0% |
| ! | GGTACTATGTCCTTTTGCTA+CGG | + | chr7.3:6160991-6161010 | MS.gene22966:intron | 40.0% |
| ! | TATGTCCTTTTGCTACGGAA+GGG | + | chr7.3:6160996-6161015 | MS.gene22966:intron | 40.0% |
| ! | TCGAGATCTAGAATGATCGT+TGG | + | chr7.3:6160939-6160958 | MS.gene22966:intron | 40.0% |
| ! | TTTGGTGGTTCAAGCTTTCA+AGG | + | chr7.3:6160103-6160122 | MS.gene22966:intron | 40.0% |
| !! | ATGATGGGTACTACAGAATG+TGG | + | chr7.3:6161268-6161287 | MS.gene22966:intron | 40.0% |
| !! | ATGTTGATGACAACTTGGTG+TGG | - | chr7.3:6161839-6161858 | None:intergenic | 40.0% |
| !! | CATGCTTTGGGGTCAATTAT+TGG | + | chr7.3:6159327-6159346 | MS.gene22966:intron | 40.0% |
| !! | CTTGTCAGTTTTCTAGAAGG+TGG | + | chr7.3:6159592-6159611 | MS.gene22966:intron | 40.0% |
| !! | GACTACATATTGAGTTGGGT+TGG | - | chr7.3:6160328-6160347 | None:intergenic | 40.0% |
| !! | GCCGTTTTCAAAAGTTATCC+CGG | - | chr7.3:6162388-6162407 | None:intergenic | 40.0% |
| !!! | TCTAGGGCTGTTTTTAACCT+GGG | - | chr7.3:6162131-6162150 | None:intergenic | 40.0% |
| !!! | TTCTAGGGCTGTTTTTAACC+TGG | - | chr7.3:6162132-6162151 | None:intergenic | 40.0% |
| !!! | TTCTATTCCCCCCCTTTTTT+TGG | + | chr7.3:6158237-6158256 | MS.gene22966:intron | 40.0% |
| AAACCTCACCCTTTCTCGTT+TGG | - | chr7.3:6161945-6161964 | None:intergenic | 45.0% | |
| AGAAAATGTGACGACAGGAG+AGG | - | chr7.3:6161081-6161100 | None:intergenic | 45.0% | |
| AGCCCATAAAGATACCGATC+TGG | + | chr7.3:6159788-6159807 | MS.gene22966:intron | 45.0% | |
| AGCTAATCAAGAGCTCTTCG+TGG | - | chr7.3:6160302-6160321 | None:intergenic | 45.0% | |
| ATCTGTTGCAGGTTATGGCA+TGG | + | chr7.3:6158142-6158161 | MS.gene22966:intron | 45.0% | |
| CGTGGGAATGGTTTAATGGT+AGG | - | chr7.3:6160284-6160303 | None:intergenic | 45.0% | |
| GAAGGACATGGACAATCTGA+AGG | + | chr7.3:6161337-6161356 | MS.gene22966:CDS | 45.0% | |
| GCAACCATTGTCAAAGGAAG+TGG | - | chr7.3:6162073-6162092 | None:intergenic | 45.0% | |
| GCTAATCAAGAGCTCTTCGT+GGG | - | chr7.3:6160301-6160320 | None:intergenic | 45.0% | |
| GGTACCAACAACAGAACTTC+AGG | + | chr7.3:6160055-6160074 | MS.gene22966:intron | 45.0% | |
| GGTGTCTTCAAGATTCATGC+TGG | - | chr7.3:6162165-6162184 | None:intergenic | 45.0% | |
| GTAACATGCATCAGGAGTTC+TGG | + | chr7.3:6157761-6157780 | MS.gene22966:intron | 45.0% | |
| GTACTACAGAATGTGGAGTG+CGG | + | chr7.3:6161275-6161294 | MS.gene22966:intron | 45.0% | |
| GTGGAAGATAGTTCCCACAA+AGG | + | chr7.3:6161889-6161908 | MS.gene22966:CDS | 45.0% | |
| GTGGGAACTATCTTCCACTT+TGG | - | chr7.3:6161887-6161906 | None:intergenic | 45.0% | |
| GTTAAACCATGCCACATTCC+AGG | - | chr7.3:6163018-6163037 | None:intergenic | 45.0% | |
| GTTCTTGTATGGAGAGTCCA+TGG | + | chr7.3:6161546-6161565 | MS.gene22966:CDS | 45.0% | |
| GTTTCCTTAACCAATGCCCA+AGG | - | chr7.3:6157923-6157942 | None:intergenic | 45.0% | |
| TGAAAAGTTGCACTCCCCTT+GGG | - | chr7.3:6157792-6157811 | None:intergenic | 45.0% | |
| TGGTTTAATGGTAGGGACGA+AGG | - | chr7.3:6160276-6160295 | None:intergenic | 45.0% | |
| ! | CTATGTCCTTTTGCTACGGA+AGG | + | chr7.3:6160995-6161014 | MS.gene22966:intron | 45.0% |
| ! | CTTTGGGTGGAATTTTGAGC+AGG | + | chr7.3:6162879-6162898 | MS.gene22966:intron | 45.0% |
| ! | GTACACCATTTTCTGATGGG+TGG | - | chr7.3:6160245-6160264 | None:intergenic | 45.0% |
| ! | TTTTTAACCTGGGCTTGTCC+TGG | - | chr7.3:6162121-6162140 | None:intergenic | 45.0% |
| !! | AAGGACCCTTCTTTTTGGGA+TGG | + | chr7.3:6161598-6161617 | MS.gene22966:CDS | 45.0% |
| !!! | GCTCTGGTTTTTCTTTGCCA+TGG | + | chr7.3:6157844-6157863 | MS.gene22966:CDS | 45.0% |
| !! | AAATTATAATAAATAAAGAA+GGG | - | chr7.3:6158538-6158557 | None:intergenic | 5.0% |
| !! | AATAAAAATATAACAATAAA+TGG | + | chr7.3:6160785-6160804 | MS.gene22966:intron | 5.0% |
| !! | TAAATTATAATAAATAAAGA+AGG | - | chr7.3:6158539-6158558 | None:intergenic | 5.0% |
| !!! | TTTATTTTTTATTTTTTTGT+AGG | + | chr7.3:6159956-6159975 | MS.gene22966:intron | 5.0% |
| AACCAATGCCCAAGGGACAT+TGG | - | chr7.3:6157915-6157934 | None:intergenic | 50.0% | |
| AACCAATGTCCCTTGGGCAT+TGG | + | chr7.3:6157910-6157929 | MS.gene22966:intron | 50.0% | |
| AAGATCCGGCCAAACGAGAA+AGG | + | chr7.3:6161933-6161952 | MS.gene22966:CDS | 50.0% | |
| ACAGCGCCATCCCAAAAAGA+AGG | - | chr7.3:6161607-6161626 | None:intergenic | 50.0% | |
| ACGACAGGAGAGGATCTACA+TGG | - | chr7.3:6161071-6161090 | None:intergenic | 50.0% | |
| AGATCCGGCCAAACGAGAAA+GGG | + | chr7.3:6161934-6161953 | MS.gene22966:CDS | 50.0% | |
| CAGCGCCATCCCAAAAAGAA+GGG | - | chr7.3:6161606-6161625 | None:intergenic | 50.0% | |
| CGAAGCCACCCATCAGAAAA+TGG | + | chr7.3:6160237-6160256 | MS.gene22966:intron | 50.0% | |
| CTGTTCCCTTCCGTAGCAAA+AGG | - | chr7.3:6161004-6161023 | None:intergenic | 50.0% | |
| GACAGACCCAGAAGTAAGCA+GGG | + | chr7.3:6162945-6162964 | MS.gene22966:CDS | 50.0% | |
| GAGTGCAGTCGTTTCATGAG+AGG | + | chr7.3:6158164-6158183 | MS.gene22966:CDS | 50.0% | |
| GGGTCATGTTAACCAGTGCA+CGG | - | chr7.3:6158053-6158072 | None:intergenic | 50.0% | |
| GGTCATGTTAACCAGTGCAC+GGG | - | chr7.3:6158052-6158071 | None:intergenic | 50.0% | |
| GTAACGGTTGAACCTCCGAT+TGG | + | chr7.3:6159660-6159679 | MS.gene22966:intron | 50.0% | |
| GTCATGTTAACCAGTGCACG+GGG | - | chr7.3:6158051-6158070 | None:intergenic | 50.0% | |
| GTGAAAAGTTGCACTCCCCT+TGG | - | chr7.3:6157793-6157812 | None:intergenic | 50.0% | |
| TAGACTAACTGCTCCACCCA+TGG | - | chr7.3:6161566-6161585 | None:intergenic | 50.0% | |
| TCAAGAGCTCTTCGTGGGAA+TGG | - | chr7.3:6160296-6160315 | None:intergenic | 50.0% | |
| TCGTTTGGCCGGATCTTTGA+AGG | - | chr7.3:6161930-6161949 | None:intergenic | 50.0% | |
| TGACAGACCCAGAAGTAAGC+AGG | + | chr7.3:6162944-6162963 | MS.gene22966:CDS | 50.0% | |
| TGATATACCAGGACAAGCCC+AGG | + | chr7.3:6162111-6162130 | MS.gene22966:CDS | 50.0% | |
| TTGTACCCTGGAATGTGGCA+TGG | + | chr7.3:6163009-6163028 | MS.gene22966:CDS | 50.0% | |
| TTGTATGGAGAGTCCATGGG+TGG | + | chr7.3:6161550-6161569 | MS.gene22966:CDS | 50.0% | |
| ! | ACATGCATCAGGAGTTCTGG+AGG | + | chr7.3:6157764-6157783 | MS.gene22966:intron | 50.0% |
| !! | TGTCCCTTGGGCATTGGTTA+AGG | + | chr7.3:6157916-6157935 | MS.gene22966:intron | 50.0% |
| CTCACCCTTTCTCGTTTGGC+CGG | - | chr7.3:6161941-6161960 | None:intergenic | 55.0% | |
| TTAACTAGTGCCCCGTGCAC+TGG | + | chr7.3:6158038-6158057 | MS.gene22966:intron | 55.0% | |
| ! | AGTGCACGGGGCACTAGTTA+AGG | - | chr7.3:6158039-6158058 | None:intergenic | 55.0% |
| !! | AGGAGTTCTGGAGGAACCCA+AGG | + | chr7.3:6157773-6157792 | MS.gene22966:intron | 55.0% |
| !! | GAGTTCTGGAGGAACCCAAG+GGG | + | chr7.3:6157775-6157794 | MS.gene22966:CDS | 55.0% |
| !! | GGAGTTCTGGAGGAACCCAA+GGG | + | chr7.3:6157774-6157793 | MS.gene22966:intron | 55.0% |
| CCTTACACATGGGCGCGACA+AGG | - | chr7.3:6161630-6161649 | None:intergenic | 60.0% | |
| CCTTGTCGCGCCCATGTGTA+AGG | + | chr7.3:6161627-6161646 | MS.gene22966:CDS | 60.0% | |
| CGGCCAAACGAGAAAGGGTG+AGG | + | chr7.3:6161939-6161958 | MS.gene22966:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 6157487 | 6163275 | 6157487 | ID=MS.gene22966 |
| chr7.3 | mRNA | 6157487 | 6163275 | 6157487 | ID=MS.gene22966.t1;Parent=MS.gene22966 |
| chr7.3 | exon | 6157487 | 6157513 | 6157487 | ID=MS.gene22966.t1.exon1;Parent=MS.gene22966.t1 |
| chr7.3 | CDS | 6157487 | 6157513 | 6157487 | ID=cds.MS.gene22966.t1;Parent=MS.gene22966.t1 |
| chr7.3 | exon | 6157775 | 6157865 | 6157775 | ID=MS.gene22966.t1.exon2;Parent=MS.gene22966.t1 |
| chr7.3 | CDS | 6157775 | 6157865 | 6157775 | ID=cds.MS.gene22966.t1;Parent=MS.gene22966.t1 |
| chr7.3 | exon | 6158153 | 6158185 | 6158153 | ID=MS.gene22966.t1.exon3;Parent=MS.gene22966.t1 |
| chr7.3 | CDS | 6158153 | 6158185 | 6158153 | ID=cds.MS.gene22966.t1;Parent=MS.gene22966.t1 |
| chr7.3 | exon | 6161284 | 6161430 | 6161284 | ID=MS.gene22966.t1.exon4;Parent=MS.gene22966.t1 |
| chr7.3 | CDS | 6161284 | 6161430 | 6161284 | ID=cds.MS.gene22966.t1;Parent=MS.gene22966.t1 |
| chr7.3 | exon | 6161518 | 6161648 | 6161518 | ID=MS.gene22966.t1.exon5;Parent=MS.gene22966.t1 |
| chr7.3 | CDS | 6161518 | 6161648 | 6161518 | ID=cds.MS.gene22966.t1;Parent=MS.gene22966.t1 |
| chr7.3 | exon | 6161818 | 6161955 | 6161818 | ID=MS.gene22966.t1.exon6;Parent=MS.gene22966.t1 |
| chr7.3 | CDS | 6161818 | 6161955 | 6161818 | ID=cds.MS.gene22966.t1;Parent=MS.gene22966.t1 |
| chr7.3 | exon | 6162095 | 6162193 | 6162095 | ID=MS.gene22966.t1.exon7;Parent=MS.gene22966.t1 |
| chr7.3 | CDS | 6162095 | 6162193 | 6162095 | ID=cds.MS.gene22966.t1;Parent=MS.gene22966.t1 |
| chr7.3 | exon | 6162901 | 6163275 | 6162901 | ID=MS.gene22966.t1.exon8;Parent=MS.gene22966.t1 |
| chr7.3 | CDS | 6162901 | 6163275 | 6162901 | ID=cds.MS.gene22966.t1;Parent=MS.gene22966.t1 |
| Gene Sequence |
| Protein sequence |
