Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23020.t1 | XP_013450331.1 | 74.7 | 1130 | 105 | 4 | 1 | 1130 | 1 | 949 | 0.00E+00 | 1535.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23020.t1 | Q6ZW49 | 33.9 | 189 | 121 | 1 | 917 | 1101 | 879 | 1067 | 1.8e-26 | 123.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23020.t1 | A0A072U3S8 | 74.7 | 1130 | 105 | 4 | 1 | 1130 | 1 | 949 | 0.0e+00 | 1535.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050648 | MS.gene23020 | 0.800057 | 1.72E-48 | -1.69E-46 |
MS.gene059300 | MS.gene23020 | 0.80361 | 3.21E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23020.t1 | MTR_7g107650 | 87.286 | 700 | 62 | 3 | 431 | 1130 | 277 | 949 | 0.0 | 1212 |
MS.gene23020.t1 | MTR_7g107650 | 87.007 | 431 | 51 | 1 | 1 | 431 | 1 | 426 | 0.0 | 766 |
MS.gene23020.t1 | MTR_3g113850 | 82.805 | 442 | 49 | 1 | 674 | 1115 | 1 | 415 | 0.0 | 730 |
MS.gene23020.t1 | MTR_3g113860 | 77.644 | 331 | 39 | 2 | 13 | 343 | 9 | 304 | 2.31e-176 | 519 |
MS.gene23020.t1 | MTR_3g113860 | 88.060 | 67 | 8 | 0 | 431 | 497 | 238 | 304 | 2.59e-32 | 128 |
MS.gene23020.t1 | MTR_2g020440 | 55.516 | 281 | 114 | 2 | 858 | 1130 | 875 | 1152 | 2.44e-90 | 316 |
MS.gene23020.t1 | MTR_2g020440 | 57.368 | 190 | 73 | 1 | 858 | 1039 | 875 | 1064 | 7.45e-63 | 233 |
MS.gene23020.t1 | MTR_7g090680 | 24.490 | 196 | 141 | 2 | 905 | 1098 | 449 | 639 | 6.83e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23020.t1 | AT4G03130 | 54.032 | 248 | 109 | 3 | 865 | 1111 | 521 | 764 | 1.17e-76 | 269 |
MS.gene23020.t1 | AT4G03130 | 54.032 | 248 | 109 | 3 | 865 | 1111 | 525 | 768 | 1.38e-76 | 269 |
MS.gene23020.t1 | AT3G21480 | 50.558 | 269 | 130 | 2 | 858 | 1124 | 772 | 1039 | 1.67e-72 | 262 |
MS.gene23020.t1 | AT4G03130 | 57.062 | 177 | 74 | 2 | 865 | 1040 | 525 | 700 | 1.35e-55 | 207 |
MS.gene23020.t1 | AT4G03130 | 59.732 | 149 | 58 | 2 | 865 | 1012 | 525 | 672 | 4.64e-47 | 181 |
MS.gene23020.t1 | AT2G41450 | 21.256 | 207 | 156 | 2 | 894 | 1098 | 403 | 604 | 6.14e-12 | 70.5 |
MS.gene23020.t1 | AT2G41450 | 21.256 | 207 | 156 | 2 | 894 | 1098 | 340 | 541 | 8.26e-12 | 69.7 |
Find 208 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTGCTCTTATTCTGGATTT+TGG | 0.082734 | 7.2:-6859556 | None:intergenic |
CATGAAGCATCTTTCAATTT+TGG | 0.104496 | 7.2:+6858367 | MS.gene23020:CDS |
CAGCTGCCATTGTTGGTTCT+TGG | 0.154534 | 7.2:-6858531 | None:intergenic |
CAGCTGCCATTGTTGGTTCT+TGG | 0.154534 | 7.2:-6858993 | None:intergenic |
CTTGCAACTACTTCCTTATT+AGG | 0.175756 | 7.2:-6860856 | None:intergenic |
CATCATTTCTGATGTGGATT+TGG | 0.193779 | 7.2:-6860270 | None:intergenic |
TTTCTGGCTTCTTCTCTTAT+AGG | 0.200318 | 7.2:-6858404 | None:intergenic |
ACCTCTCGAGTTCCAACTTC+TGG | 0.226667 | 7.2:-6861280 | None:intergenic |
AGCTAATGCCCCAAGAGTTT+TGG | 0.247172 | 7.2:+6859914 | MS.gene23020:CDS |
CTATTTCAAGGGTTTCAAAA+TGG | 0.266684 | 7.2:+6858184 | MS.gene23020:CDS |
ATAAACTAGGTAGATGTAAT+TGG | 0.272449 | 7.2:+6861848 | MS.gene23020:CDS |
GATGGTCCATTCACCGAAAC+TGG | 0.290747 | 7.2:+6857532 | MS.gene23020:CDS |
ATCATTTCTGATGTGGATTT+GGG | 0.318357 | 7.2:-6860269 | None:intergenic |
ACCACACATCAAACCTAATA+AGG | 0.320008 | 7.2:+6860843 | MS.gene23020:CDS |
ATCAAACACTTTCTCTGGTT+GGG | 0.324734 | 7.2:-6859202 | None:intergenic |
TGCTAAATGTATCTTCTTGT+AGG | 0.333450 | 7.2:+6859316 | MS.gene23020:CDS |
ATAGCATCACCAGCTGAAAC+TGG | 0.335241 | 7.2:-6860017 | None:intergenic |
TGCGAAATGTATCTTCTTGT+AGG | 0.341650 | 7.2:+6858854 | MS.gene23020:CDS |
AAATCTTGTCTCAGGGGAAA+TGG | 0.343357 | 7.2:+6859392 | MS.gene23020:CDS |
TCCAACCCAGTTTCGGTGAA+TGG | 0.347792 | 7.2:-6857538 | None:intergenic |
TGCTGAAGCTATGGATGCTT+TGG | 0.357532 | 7.2:+6858678 | MS.gene23020:CDS |
TGCTGAAGCTATGGATGCTT+TGG | 0.357532 | 7.2:+6859140 | MS.gene23020:CDS |
TTACTGTCAGCTGCCATTGT+TGG | 0.362346 | 7.2:-6858538 | None:intergenic |
TTACTGTCAGCTGCCATTGT+TGG | 0.362346 | 7.2:-6859000 | None:intergenic |
AGTTCTGTTTAGTCAACATT+TGG | 0.370660 | 7.2:+6860334 | MS.gene23020:CDS |
CAACCTTCATCTGCACCTTC+TGG | 0.370828 | 7.2:+6856810 | MS.gene23020:CDS |
CTAGGTAGATGTAATTGGTT+TGG | 0.373613 | 7.2:+6861853 | MS.gene23020:CDS |
CAAAACCTCTCTTAAGGAAA+TGG | 0.375300 | 7.2:-6861129 | None:intergenic |
TTCACTGCATATTGATGAAC+TGG | 0.376157 | 7.2:-6859466 | None:intergenic |
GCCACAGCTTGTGGGAAATC+TGG | 0.377629 | 7.2:+6857817 | MS.gene23020:CDS |
AAGATTTACGCACAGCATTT+CGG | 0.378878 | 7.2:-6859986 | None:intergenic |
GATGCATCAAACACTTTCTC+TGG | 0.379971 | 7.2:-6858745 | None:intergenic |
GATGCATCAAACACTTTCTC+TGG | 0.379971 | 7.2:-6859207 | None:intergenic |
TTGAAGGAACTTAGCAGGTT+AGG | 0.381476 | 7.2:+6860242 | MS.gene23020:CDS |
CTTGCTCGAGCAAGAGAAAC+TGG | 0.381869 | 7.2:-6860698 | None:intergenic |
TATTGTTCTTCTTTCTAGAA+TGG | 0.383852 | 7.2:-6859605 | None:intergenic |
CAAGACTCAAATCTTGTCTC+AGG | 0.383943 | 7.2:+6859384 | MS.gene23020:CDS |
TTCTTCTCTCTAGGATGGCT+TGG | 0.384027 | 7.2:-6859651 | None:intergenic |
TGCGGTGCTCATTGCGTGTA+TGG | 0.386216 | 7.2:-6860181 | None:intergenic |
ACAGAAGACATGTCTGATAT+TGG | 0.393606 | 7.2:+6858637 | MS.gene23020:CDS |
ACAGAAGACATGTCTGATAT+TGG | 0.393606 | 7.2:+6859099 | MS.gene23020:CDS |
CATCAATACCCAAAACTCTT+GGG | 0.395811 | 7.2:-6859923 | None:intergenic |
TCATCAATACCCAAAACTCT+TGG | 0.404699 | 7.2:-6859924 | None:intergenic |
TAGGTAGATGTAATTGGTTT+GGG | 0.408948 | 7.2:+6861854 | MS.gene23020:CDS |
AGTTTATCTACTAGCTCATA+TGG | 0.411842 | 7.2:+6859768 | MS.gene23020:CDS |
TGCTGGAAGCAATGGCTCTT+GGG | 0.412266 | 7.2:+6860558 | MS.gene23020:CDS |
TCCAGTGGTGTCAGACGTTA+AGG | 0.412381 | 7.2:+6859734 | MS.gene23020:CDS |
AAGATAAAGACCCTTTCAAA+TGG | 0.413596 | 7.2:+6858296 | MS.gene23020:CDS |
TTCTTCTTTCTAGAATGGCT+TGG | 0.415937 | 7.2:-6859600 | None:intergenic |
GGTTACTGCTGTTCATGGTC+AGG | 0.420488 | 7.2:+6860882 | MS.gene23020:CDS |
TGGAATTATAATCCAGAAGT+TGG | 0.421404 | 7.2:+6861268 | MS.gene23020:CDS |
TGTCTTCTCCCAGTTTCAGC+TGG | 0.422404 | 7.2:+6860008 | MS.gene23020:CDS |
AGCTTGGTTACTGCTGTTCA+TGG | 0.423956 | 7.2:+6860877 | MS.gene23020:CDS |
ATGCTGGAAGCAATGGCTCT+TGG | 0.424127 | 7.2:+6860557 | MS.gene23020:CDS |
CCTGTAGAGGATATGATAAC+TGG | 0.424865 | 7.2:+6857604 | MS.gene23020:CDS |
AGTTGGTGAAAGATTTCTTC+AGG | 0.425535 | 7.2:+6857702 | MS.gene23020:CDS |
GGAAGTAAGTTAACTATTGA+AGG | 0.425993 | 7.2:+6859426 | MS.gene23020:CDS |
AACTTGCACTATAGTTTCCT+TGG | 0.426671 | 7.2:-6858486 | None:intergenic |
TGATATGCGTCCCTTGTTGC+TGG | 0.429452 | 7.2:+6860058 | MS.gene23020:CDS |
TACTTGCACTATAGTTTCCT+TGG | 0.431062 | 7.2:-6858948 | None:intergenic |
AAATCAAATGCCACAGCTTG+TGG | 0.435651 | 7.2:+6857808 | MS.gene23020:CDS |
AGTTCGGAGCTTGTTCTGAA+TGG | 0.436206 | 7.2:+6861248 | MS.gene23020:CDS |
TAAGGAAGTAGTTGCAAGCT+TGG | 0.440475 | 7.2:+6860861 | MS.gene23020:CDS |
CTAGAAAGAAGAACAATAGA+TGG | 0.445385 | 7.2:+6859610 | MS.gene23020:CDS |
AGGATACTATTAAATATAAG+AGG | 0.448859 | 7.2:+6859688 | MS.gene23020:CDS |
ATAGATGTGGATCTATTTCA+AGG | 0.450011 | 7.2:+6858172 | MS.gene23020:CDS |
GATTCTTGGGATTATCCAAA+AGG | 0.450038 | 7.2:+6859870 | MS.gene23020:CDS |
ATGAGCTATTCTCAAGATAC+AGG | 0.453626 | 7.2:-6861901 | None:intergenic |
ACATTATTGTTCTTCTCTCT+AGG | 0.459165 | 7.2:-6859660 | None:intergenic |
AGGATTCAAAACCTCTCTTA+AGG | 0.461360 | 7.2:-6861135 | None:intergenic |
TGCGAGAGGGTCAATTAGTC+TGG | 0.464354 | 7.2:+6858243 | MS.gene23020:CDS |
GAGGAAGGGAAAGTGTTTAG+TGG | 0.465671 | 7.2:+6859707 | MS.gene23020:CDS |
AGGAGCTGCTATTTACAGTT+CGG | 0.467327 | 7.2:+6861232 | MS.gene23020:intron |
CATCAAACACTTTCTCTGGT+TGG | 0.470848 | 7.2:-6859203 | None:intergenic |
GACGAAGAAATGAATAATAC+AGG | 0.472960 | 7.2:+6857670 | MS.gene23020:CDS |
GATGAAGCTAAAGATGCAAA+TGG | 0.473544 | 7.2:+6857460 | MS.gene23020:CDS |
TCAAAAGTGAAGACTTTGGC+AGG | 0.475041 | 7.2:-6860223 | None:intergenic |
GAAGGTTGAGTGTTCGCCAT+TGG | 0.475261 | 7.2:-6856795 | None:intergenic |
GCTTCAGTTGCTCCATGTGA+AGG | 0.477733 | 7.2:+6860137 | MS.gene23020:CDS |
TTGGCCAATCTGTCCCCTGC+CGG | 0.478667 | 7.2:+6858697 | MS.gene23020:CDS |
TTGGCCAATCTGTCCCCTGC+CGG | 0.478667 | 7.2:+6859159 | MS.gene23020:CDS |
TACTGTCAGCCCATTTGAAA+GGG | 0.481156 | 7.2:-6858306 | None:intergenic |
TATTGTTCTTCTCTCTAGGA+TGG | 0.481432 | 7.2:-6859656 | None:intergenic |
TCAAACACTTTCTCTGGTTG+GGG | 0.483131 | 7.2:-6859201 | None:intergenic |
AAAGCCGGCAGGGGACAGAT+TGG | 0.483516 | 7.2:-6858701 | None:intergenic |
AAAGCCGGCAGGGGACAGAT+TGG | 0.483516 | 7.2:-6859163 | None:intergenic |
TTTACTCATCATTTCTGATG+TGG | 0.484036 | 7.2:-6860276 | None:intergenic |
TCAAATAGCTGCTGAAGCTA+TGG | 0.484891 | 7.2:+6858669 | MS.gene23020:CDS |
TCAAATAGCTGCTGAAGCTA+TGG | 0.484891 | 7.2:+6859131 | MS.gene23020:CDS |
TACTATTAAATATAAGAGGA+AGG | 0.489408 | 7.2:+6859692 | MS.gene23020:CDS |
CCAGTTATCATATCCTCTAC+AGG | 0.492028 | 7.2:-6857604 | None:intergenic |
GCCTTAACGTCTGACACCAC+TGG | 0.492157 | 7.2:-6859735 | None:intergenic |
TTACCTTCTGTTGTTGCTTG+AGG | 0.495660 | 7.2:-6860367 | None:intergenic |
TTCTCTTATAGGTCAGTCCA+TGG | 0.497329 | 7.2:-6858393 | None:intergenic |
TCTTCATTTAAAGAGAATCC+TGG | 0.498971 | 7.2:+6858802 | MS.gene23020:CDS |
TCTTCATTTAAAGAGAATCC+TGG | 0.498971 | 7.2:+6859264 | MS.gene23020:CDS |
ATCTACTGCATCAAACTCAA+TGG | 0.501709 | 7.2:+6860490 | MS.gene23020:CDS |
ACATAGCAGGTAGACATTGA+TGG | 0.501923 | 7.2:-6858087 | None:intergenic |
AATCAAATGCCACAGCTTGT+GGG | 0.502896 | 7.2:+6857809 | MS.gene23020:CDS |
CGTAGCTGCACTAGGTTTCG+TGG | 0.503381 | 7.2:+6858132 | MS.gene23020:CDS |
AATCAAAATTTAAAAGAAGC+TGG | 0.504946 | 7.2:+6858328 | MS.gene23020:CDS |
TCCTTCAAAAGTGAAGACTT+TGG | 0.505382 | 7.2:-6860227 | None:intergenic |
AGGTTTACAGAAGGCGTTTG+AGG | 0.508387 | 7.2:+6861878 | MS.gene23020:CDS |
CTCTGAATCCTCTACAATCT+CGG | 0.515523 | 7.2:-6857581 | None:intergenic |
GCTTGCTCACATGGTAACTT+AGG | 0.520669 | 7.2:-6857778 | None:intergenic |
CAAGTTACAAAGAATAAACT+AGG | 0.522732 | 7.2:+6861835 | MS.gene23020:CDS |
CACGAAACCTAGTGCAGCTA+CGG | 0.525896 | 7.2:-6858131 | None:intergenic |
CATGAAGAGGTCTGCTTACG+AGG | 0.527746 | 7.2:+6859498 | MS.gene23020:CDS |
TTTGAGTTTGCTTGCTCACA+TGG | 0.529211 | 7.2:-6857787 | None:intergenic |
TCTAAGTCCGCTAGCAAGCA+AGG | 0.534512 | 7.2:+6858892 | MS.gene23020:CDS |
AAATCCAGAATAAGAGCAGA+TGG | 0.536380 | 7.2:+6859559 | MS.gene23020:CDS |
CACTCATGGCTTGAGAGTTG+TGG | 0.540651 | 7.2:+6860596 | MS.gene23020:CDS |
TCCAGCGGTGAACAATTCTT+CGG | 0.543654 | 7.2:+6857735 | MS.gene23020:CDS |
TAGATGTAATTGGTTTGGGA+AGG | 0.545675 | 7.2:+6861858 | MS.gene23020:CDS |
AAGACTCAAATCTTGTCTCA+GGG | 0.546326 | 7.2:+6859385 | MS.gene23020:CDS |
AAAGAATATGCTGGAAGCAA+TGG | 0.546970 | 7.2:+6860550 | MS.gene23020:CDS |
AGATAAAGACCCTTTCAAAT+GGG | 0.547271 | 7.2:+6858297 | MS.gene23020:CDS |
AGTGCAATAGAATGTGAACC+AGG | 0.548026 | 7.2:-6858820 | None:intergenic |
AGTGCAATAGAATGTGAACC+AGG | 0.548026 | 7.2:-6859282 | None:intergenic |
GCTTGTGGGAAATCTGGTAC+TGG | 0.548821 | 7.2:+6857823 | MS.gene23020:CDS |
AAATGAGAACCATCAAGAAA+CGG | 0.549822 | 7.2:+6857483 | MS.gene23020:CDS |
GAGGACACCTTAGTGGTCGA+TGG | 0.549829 | 7.2:+6857514 | MS.gene23020:CDS |
GAAGAACAATAATGTTGAGG+AGG | 0.549872 | 7.2:+6859668 | MS.gene23020:CDS |
TCGGCCCTCTAGACTTCTAG+TGG | 0.551503 | 7.2:-6859967 | None:intergenic |
TTACCAGAAGGTGCAGATGA+AGG | 0.555117 | 7.2:-6856813 | None:intergenic |
TTACTGTCAGCCCATTTGAA+AGG | 0.556411 | 7.2:-6858307 | None:intergenic |
ACCGAAGAATTGTTCACCGC+TGG | 0.558855 | 7.2:-6857736 | None:intergenic |
TGCACGTACAAAGAATATGC+TGG | 0.558915 | 7.2:+6860541 | MS.gene23020:CDS |
GAAGTAAGTTAACTATTGAA+GGG | 0.559605 | 7.2:+6859427 | MS.gene23020:CDS |
TCACTGAAATGAAAGCCGGC+AGG | 0.559837 | 7.2:-6858712 | None:intergenic |
TCACTGAAATGAAAGCCGGC+AGG | 0.559837 | 7.2:-6859174 | None:intergenic |
CACTGAAATGAAAGCCGGCA+GGG | 0.560472 | 7.2:-6858711 | None:intergenic |
CACTGAAATGAAAGCCGGCA+GGG | 0.560472 | 7.2:-6859173 | None:intergenic |
TCCATTCACCGAAACTGGGT+TGG | 0.560966 | 7.2:+6857537 | MS.gene23020:CDS |
TCACCAACCGTAGCTGCACT+AGG | 0.565535 | 7.2:+6858124 | MS.gene23020:CDS |
TGAGCATCATATGACATAGC+AGG | 0.567445 | 7.2:-6858100 | None:intergenic |
TGAAAGTGTATCACATGAAG+AGG | 0.568359 | 7.2:+6859485 | MS.gene23020:CDS |
AGAGAAGAACAATAATGTTG+AGG | 0.570009 | 7.2:+6859665 | MS.gene23020:CDS |
GGAAAATGTGGTGCAAGTAA+TGG | 0.572317 | 7.2:+6858913 | MS.gene23020:CDS |
ACAAGGGACGCATATCATGC+AGG | 0.574602 | 7.2:-6860052 | None:intergenic |
ATTGTAAGTTTGCTTGCTAG+CGG | 0.578774 | 7.2:-6859361 | None:intergenic |
GGAAAATGTGGTGCAAGTAA+TGG | 0.580397 | 7.2:+6858451 | MS.gene23020:CDS |
AGAAGATACATTTCGCATGT+CGG | 0.580835 | 7.2:-6858848 | None:intergenic |
CTGTTCCACTAGAAGTCTAG+AGG | 0.581350 | 7.2:+6859962 | MS.gene23020:CDS |
AAGACAAAAGCCACTCCTGA+AGG | 0.582746 | 7.2:+6860718 | MS.gene23020:CDS |
TGCCGCCATTTCCTTAAGAG+AGG | 0.583071 | 7.2:+6861124 | MS.gene23020:CDS |
GAATGGACCATCGACCACTA+AGG | 0.583290 | 7.2:-6857521 | None:intergenic |
TCCTTATTAGGTTTGATGTG+TGG | 0.584687 | 7.2:-6860844 | None:intergenic |
ACTTAGTATTGACACACTCA+TGG | 0.586020 | 7.2:+6860582 | MS.gene23020:CDS |
ACTATTAAATATAAGAGGAA+GGG | 0.589715 | 7.2:+6859693 | MS.gene23020:CDS |
AGAAGATACATTTAGCATGT+CGG | 0.590072 | 7.2:-6859310 | None:intergenic |
TAGATGTGGATCTATTTCAA+GGG | 0.590590 | 7.2:+6858173 | MS.gene23020:CDS |
GCTAGCAAGCAAGGAAAATG+TGG | 0.590973 | 7.2:+6858901 | MS.gene23020:CDS |
TTCAACATGTGCCAGCAACA+AGG | 0.590992 | 7.2:-6860069 | None:intergenic |
GAGGTCTGCTTACGAGGAGA+GGG | 0.593562 | 7.2:+6859504 | MS.gene23020:CDS |
AGTATCACTGAAATGAAAGC+CGG | 0.593734 | 7.2:-6859178 | None:intergenic |
TGACAGTAATAACTCTCTCA+AGG | 0.594227 | 7.2:+6858552 | MS.gene23020:CDS |
TGACAGTAATAACTCTCTCA+AGG | 0.594227 | 7.2:+6859014 | MS.gene23020:CDS |
AATATCCACGTTGTCTCTTG+CGG | 0.594294 | 7.2:-6858596 | None:intergenic |
AATATCCACGTTGTCTCTTG+CGG | 0.594294 | 7.2:-6859058 | None:intergenic |
ATCTACTAGCTCATATGGTG+TGG | 0.595215 | 7.2:+6859773 | MS.gene23020:CDS |
GTACTTGTCATCAATAGATG+TGG | 0.597840 | 7.2:+6858159 | MS.gene23020:CDS |
TCAACATGTGCCAGCAACAA+GGG | 0.598238 | 7.2:-6860068 | None:intergenic |
TGTCCTCAAGCAACAACAGA+AGG | 0.600916 | 7.2:+6860364 | MS.gene23020:CDS |
ACTGAAATGAAAGCCGGCAG+GGG | 0.601052 | 7.2:-6858710 | None:intergenic |
ACTGAAATGAAAGCCGGCAG+GGG | 0.601052 | 7.2:-6859172 | None:intergenic |
TAGCATCACCAGCTGAAACT+GGG | 0.601379 | 7.2:-6860016 | None:intergenic |
CTAGCTCATATGGTGTGGCT+AGG | 0.602804 | 7.2:+6859778 | MS.gene23020:CDS |
ACCAGATTTCCCACAAGCTG+TGG | 0.603886 | 7.2:-6857818 | None:intergenic |
ATCAATACCCAAAACTCTTG+GGG | 0.605499 | 7.2:-6859922 | None:intergenic |
AGTATCACTGAAATGAAAGC+CGG | 0.605986 | 7.2:-6858716 | None:intergenic |
ATGGTCCATTCACCGAAACT+GGG | 0.606739 | 7.2:+6857533 | MS.gene23020:CDS |
AGAAGTGGTGCTTGATAGCG+AGG | 0.607774 | 7.2:+6857648 | MS.gene23020:CDS |
AACCTCTCTTAAGGAAATGG+CGG | 0.608063 | 7.2:-6861126 | None:intergenic |
GTGTTTAGTGGCAGATCCAG+TGG | 0.609201 | 7.2:+6859719 | MS.gene23020:CDS |
AGAGGTCTGCTTACGAGGAG+AGG | 0.609532 | 7.2:+6859503 | MS.gene23020:CDS |
GGTTTGGGAAGGTTTACAGA+AGG | 0.611228 | 7.2:+6861869 | MS.gene23020:CDS |
AATACAGGCAAAGTGACAGT+TGG | 0.612174 | 7.2:+6857685 | MS.gene23020:CDS |
GAAGAGCAGTTTGAACCACC+AGG | 0.616103 | 7.2:+6859800 | MS.gene23020:CDS |
AAACCTAGTGCAGCTACGGT+TGG | 0.616667 | 7.2:-6858127 | None:intergenic |
TAATAATACCGAGATTGTAG+AGG | 0.617241 | 7.2:+6857573 | MS.gene23020:CDS |
AATGTGCTTGAAGGTGACAA+AGG | 0.618719 | 7.2:+6858028 | MS.gene23020:intron |
AAGTAAGTTAACTATTGAAG+GGG | 0.621324 | 7.2:+6859428 | MS.gene23020:CDS |
CTTCAGAACCAAGGAAAATG+TGG | 0.621843 | 7.2:+6858439 | MS.gene23020:CDS |
CTCAAGTCTCAAGTGCGAGA+GGG | 0.621989 | 7.2:+6858230 | MS.gene23020:CDS |
CCTCAAGTCTCAAGTGCGAG+AGG | 0.624144 | 7.2:+6858229 | MS.gene23020:CDS |
TCAAAATGGAAAGACCGCTA+TGG | 0.625933 | 7.2:+6858198 | MS.gene23020:CDS |
CCTCTCGCACTTGAGACTTG+AGG | 0.634029 | 7.2:-6858229 | None:intergenic |
AGACTCAAATCTTGTCTCAG+GGG | 0.637923 | 7.2:+6859386 | MS.gene23020:CDS |
TTTAGTCCAAGAACCAACAA+TGG | 0.647277 | 7.2:+6858525 | MS.gene23020:CDS |
TTTAGTCCAAGAACCAACAA+TGG | 0.647277 | 7.2:+6858987 | MS.gene23020:CDS |
AATACAAATACCTTCAGGAG+TGG | 0.647538 | 7.2:-6860728 | None:intergenic |
GGTAGTCGTCTTCAGAACCA+AGG | 0.648799 | 7.2:+6858430 | MS.gene23020:CDS |
AGAGGATTCAGAGCCTGTAG+AGG | 0.653298 | 7.2:+6857591 | MS.gene23020:CDS |
TCCAGAAGTTGGAACTCGAG+AGG | 0.653513 | 7.2:+6861279 | MS.gene23020:CDS |
TGTTCCACTAGAAGTCTAGA+GGG | 0.654937 | 7.2:+6859963 | MS.gene23020:CDS |
CTTGTCTGCTATGAAATGAG+TGG | 0.656207 | 7.2:-6860516 | None:intergenic |
GATTATCCAAAAGGACCAAG+AGG | 0.658283 | 7.2:+6859879 | MS.gene23020:CDS |
TCTGCGGACTAACTTCAACC+TGG | 0.658323 | 7.2:-6859818 | None:intergenic |
TTGAGGTGATTTCTCCATAG+CGG | 0.693838 | 7.2:-6858212 | None:intergenic |
ATGTGAGTATGAGACAGAAG+TGG | 0.698691 | 7.2:+6857633 | MS.gene23020:CDS |
TCAGGATAAAAGTAGTCCAG+CGG | 0.711884 | 7.2:+6857720 | MS.gene23020:CDS |
AATGGATGTGATGAGAACCA+AGG | 0.712455 | 7.2:+6858469 | MS.gene23020:CDS |
AATGGATGTGATGAGAACCA+AGG | 0.712455 | 7.2:+6858931 | MS.gene23020:CDS |
GCGGACTAACTTCAACCTGG+TGG | 0.713063 | 7.2:-6859815 | None:intergenic |
ATGTGCCGCAAGAGACAACG+TGG | 0.721889 | 7.2:+6858591 | MS.gene23020:CDS |
ATGTGCCGCAAGAGACAACG+TGG | 0.721889 | 7.2:+6859053 | MS.gene23020:CDS |
CTGCTGGTAACTGATATCTG+CGG | 0.750636 | 7.2:-6859834 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TACTTATTAATAAGGTATTA+TGG | - | chr7.2:6857948-6857967 | None:intergenic | 15.0% |
!!! | TTTCTTTTTGTTGATTATTA+TGG | + | chr7.2:6857377-6857396 | MS.gene23020:intron | 15.0% |
!! | AAAACTGTCTTAATGTTAAA+TGG | - | chr7.2:6857875-6857894 | None:intergenic | 20.0% |
!! | AATCAAAATTTAAAAGAAGC+TGG | + | chr7.2:6858328-6858347 | MS.gene23020:CDS | 20.0% |
!! | ACTATTAAATATAAGAGGAA+GGG | + | chr7.2:6859693-6859712 | MS.gene23020:CDS | 20.0% |
!! | ACTTAATTAATCAGATTAAG+TGG | - | chr7.2:6857086-6857105 | None:intergenic | 20.0% |
!! | ACTTAGAGATAAATTAACTT+TGG | + | chr7.2:6861646-6861665 | MS.gene23020:intron | 20.0% |
!! | AGGATACTATTAAATATAAG+AGG | + | chr7.2:6859688-6859707 | MS.gene23020:CDS | 20.0% |
!! | AGGTATGATGATATAATATT+TGG | + | chr7.2:6861376-6861395 | MS.gene23020:intron | 20.0% |
!! | ATATCATATCATCAATATGA+AGG | - | chr7.2:6861333-6861352 | None:intergenic | 20.0% |
!! | ATATTAACCTAACTATACAA+AGG | + | chr7.2:6861407-6861426 | MS.gene23020:intron | 20.0% |
!! | TAATCAACAAAAAGAAACAT+AGG | - | chr7.2:6857374-6857393 | None:intergenic | 20.0% |
!! | TACTATTAAATATAAGAGGA+AGG | + | chr7.2:6859692-6859711 | MS.gene23020:CDS | 20.0% |
!! | TATGATATTTAGATGTCATT+TGG | + | chr7.2:6861345-6861364 | MS.gene23020:intron | 20.0% |
!!! | AATGTTGATTCAATATGATT+AGG | + | chr7.2:6857436-6857455 | MS.gene23020:intron | 20.0% |
!!! | ATGAGAAAAATTATGTTTTG+AGG | + | chr7.2:6860639-6860658 | MS.gene23020:CDS | 20.0% |
!!! | ATTATTATACCTGTTTTTGA+TGG | + | chr7.2:6857014-6857033 | MS.gene23020:intron | 20.0% |
!!! | ATTGCTTTTATGTTTATCAT+AGG | + | chr7.2:6860393-6860412 | MS.gene23020:intron | 20.0% |
!!! | TAAATTTTAACAAGATTGTC+AGG | - | chr7.2:6861768-6861787 | None:intergenic | 20.0% |
!!! | TCATTTTTTCAAATTGTTAC+CGG | + | chr7.2:6857279-6857298 | MS.gene23020:intron | 20.0% |
!!! | TGAGAAAAATTATGTTTTGA+GGG | + | chr7.2:6860640-6860659 | MS.gene23020:CDS | 20.0% |
!!! | TTATATTTGTCCTTCATTTT+TGG | + | chr7.2:6861578-6861597 | MS.gene23020:intron | 20.0% |
!!! | TTTTTCAAAGATTGATTCTT+GGG | + | chr7.2:6859857-6859876 | MS.gene23020:CDS | 20.0% |
! | AAATATTAGGTTCATCATAG+TGG | - | chr7.2:6861469-6861488 | None:intergenic | 25.0% |
! | AAGTAAGTTAACTATTGAAG+GGG | + | chr7.2:6859428-6859447 | MS.gene23020:CDS | 25.0% |
! | AATATTAGGTTCATCATAGT+GGG | - | chr7.2:6861468-6861487 | None:intergenic | 25.0% |
! | ACAATAATACAAATACCTTC+AGG | - | chr7.2:6860736-6860755 | None:intergenic | 25.0% |
! | ATAAAACATAATGTGCTTGA+AGG | + | chr7.2:6858019-6858038 | MS.gene23020:intron | 25.0% |
! | ATAAACTAGGTAGATGTAAT+TGG | + | chr7.2:6861848-6861867 | MS.gene23020:CDS | 25.0% |
! | ATGAAAAAGGAAAAGGAAAT+AGG | + | chr7.2:6860665-6860684 | MS.gene23020:CDS | 25.0% |
! | CAAGTTACAAAGAATAAACT+AGG | + | chr7.2:6861835-6861854 | MS.gene23020:CDS | 25.0% |
! | CAGTCAACTACTTATTAATA+AGG | - | chr7.2:6857956-6857975 | None:intergenic | 25.0% |
! | GAAGTAAGTTAACTATTGAA+GGG | + | chr7.2:6859427-6859446 | MS.gene23020:CDS | 25.0% |
! | TTTCTCATCAATCAAAAAGT+TGG | - | chr7.2:6860627-6860646 | None:intergenic | 25.0% |
!! | TATTGTTCTTCTTTCTAGAA+TGG | - | chr7.2:6859608-6859627 | None:intergenic | 25.0% |
!!! | GTTTTTCAAAGATTGATTCT+TGG | + | chr7.2:6859856-6859875 | MS.gene23020:CDS | 25.0% |
AAATGAGAACCATCAAGAAA+CGG | + | chr7.2:6857483-6857502 | MS.gene23020:CDS | 30.0% | |
AAGAATCGAAAATTACCAGA+AGG | - | chr7.2:6856828-6856847 | None:intergenic | 30.0% | |
AAGATAAAGACCCTTTCAAA+TGG | + | chr7.2:6858296-6858315 | MS.gene23020:CDS | 30.0% | |
ACATTATTGTTCTTCTCTCT+AGG | - | chr7.2:6859663-6859682 | None:intergenic | 30.0% | |
AGAAGATACATTTAGCATGT+CGG | - | chr7.2:6859313-6859332 | None:intergenic | 30.0% | |
AGAGAAGAACAATAATGTTG+AGG | + | chr7.2:6859665-6859684 | MS.gene23020:CDS | 30.0% | |
AGATAAAGACCCTTTCAAAT+GGG | + | chr7.2:6858297-6858316 | MS.gene23020:CDS | 30.0% | |
AGGGGAAATGGAAAAAATAA+TGG | + | chr7.2:6859404-6859423 | MS.gene23020:CDS | 30.0% | |
AGTTCTGTTTAGTCAACATT+TGG | + | chr7.2:6860334-6860353 | MS.gene23020:CDS | 30.0% | |
AGTTTATCTACTAGCTCATA+TGG | + | chr7.2:6859768-6859787 | MS.gene23020:CDS | 30.0% | |
ATAGATGTGGATCTATTTCA+AGG | + | chr7.2:6858172-6858191 | MS.gene23020:CDS | 30.0% | |
ATCATTTCTGATGTGGATTT+GGG | - | chr7.2:6860272-6860291 | None:intergenic | 30.0% | |
ATGAGAAGACTTAAATTTGC+AGG | + | chr7.2:6861212-6861231 | MS.gene23020:intron | 30.0% | |
CTAGAAAGAAGAACAATAGA+TGG | + | chr7.2:6859610-6859629 | MS.gene23020:CDS | 30.0% | |
CTATTTCAAGGGTTTCAAAA+TGG | + | chr7.2:6858184-6858203 | MS.gene23020:CDS | 30.0% | |
CTCATATGTCACATGAATAA+AGG | - | chr7.2:6861197-6861216 | None:intergenic | 30.0% | |
CTGAATGTACTATTGTAGTT+TGG | + | chr7.2:6856972-6856991 | MS.gene23020:intron | 30.0% | |
CTGGCAAGAATGAAAATATT+AGG | - | chr7.2:6861482-6861501 | None:intergenic | 30.0% | |
GACGAAGAAATGAATAATAC+AGG | + | chr7.2:6857670-6857689 | MS.gene23020:CDS | 30.0% | |
GCTAACATAGTACAAATCAA+AGG | - | chr7.2:6861436-6861455 | None:intergenic | 30.0% | |
GGAAGTAAGTTAACTATTGA+AGG | + | chr7.2:6859426-6859445 | MS.gene23020:CDS | 30.0% | |
GGGGAAATGGAAAAAATAAT+GGG | + | chr7.2:6859405-6859424 | MS.gene23020:CDS | 30.0% | |
TAATAATACCGAGATTGTAG+AGG | + | chr7.2:6857573-6857592 | MS.gene23020:CDS | 30.0% | |
TAGATGTGGATCTATTTCAA+GGG | + | chr7.2:6858173-6858192 | MS.gene23020:CDS | 30.0% | |
TCTTAACACACCAAAAATGA+AGG | - | chr7.2:6861591-6861610 | None:intergenic | 30.0% | |
TCTTCATTTAAAGAGAATCC+TGG | + | chr7.2:6858802-6858821 | MS.gene23020:CDS | 30.0% | |
TGCTAAATGTATCTTCTTGT+AGG | + | chr7.2:6859316-6859335 | MS.gene23020:CDS | 30.0% | |
TGGAATTATAATCCAGAAGT+TGG | + | chr7.2:6861268-6861287 | MS.gene23020:CDS | 30.0% | |
TGTATAGATAGAACTTCGTT+AGG | + | chr7.2:6857405-6857424 | MS.gene23020:intron | 30.0% | |
TTGAACGTAATTACATGTGT+CGG | - | chr7.2:6857254-6857273 | None:intergenic | 30.0% | |
TTTACTCATCATTTCTGATG+TGG | - | chr7.2:6860279-6860298 | None:intergenic | 30.0% | |
! | ATCAATCTTTGAAAAACTGC+TGG | - | chr7.2:6859853-6859872 | None:intergenic | 30.0% |
! | GGTTTCAATATTAGGTGTTT+TGG | + | chr7.2:6860953-6860972 | MS.gene23020:intron | 30.0% |
! | TAGGTAGATGTAATTGGTTT+GGG | + | chr7.2:6861854-6861873 | MS.gene23020:CDS | 30.0% |
!! | CATGAAGCATCTTTCAATTT+TGG | + | chr7.2:6858367-6858386 | MS.gene23020:CDS | 30.0% |
!!! | GAATTTTTTATGCCTTCACA+TGG | - | chr7.2:6860152-6860171 | None:intergenic | 30.0% |
!!! | TGTTTTGAGGGATATGAAAA+AGG | + | chr7.2:6860652-6860671 | MS.gene23020:CDS | 30.0% |
!!! | TTTTCTCACATGCTTTTTTG+CGG | - | chr7.2:6860202-6860221 | None:intergenic | 30.0% |
AAAGAATATGCTGGAAGCAA+TGG | + | chr7.2:6860550-6860569 | MS.gene23020:CDS | 35.0% | |
AAATCCAGAATAAGAGCAGA+TGG | + | chr7.2:6859559-6859578 | MS.gene23020:CDS | 35.0% | |
AACTTGCACTATAGTTTCCT+TGG | - | chr7.2:6858489-6858508 | None:intergenic | 35.0% | |
AAGACTCAAATCTTGTCTCA+GGG | + | chr7.2:6859385-6859404 | MS.gene23020:CDS | 35.0% | |
AAGAGAAGAAGCCAGAAAAA+AGG | + | chr7.2:6858409-6858428 | MS.gene23020:CDS | 35.0% | |
AAGATTTACGCACAGCATTT+CGG | - | chr7.2:6859989-6860008 | None:intergenic | 35.0% | |
AAGGTAGCCTTTGTATAGTT+AGG | - | chr7.2:6861417-6861436 | None:intergenic | 35.0% | |
AATACAAATACCTTCAGGAG+TGG | - | chr7.2:6860731-6860750 | None:intergenic | 35.0% | |
ACACCTAATATTGAAACCAC+AGG | - | chr7.2:6860951-6860970 | None:intergenic | 35.0% | |
ACAGAAGACATGTCTGATAT+TGG | + | chr7.2:6858637-6858656 | MS.gene23020:CDS | 35.0% | |
ACCACACATCAAACCTAATA+AGG | + | chr7.2:6860843-6860862 | MS.gene23020:CDS | 35.0% | |
AGAAGATACATTTCGCATGT+CGG | - | chr7.2:6858851-6858870 | None:intergenic | 35.0% | |
AGATACAACAACTTCAAGAG+TGG | - | chr7.2:6861508-6861527 | None:intergenic | 35.0% | |
AGGATTCAAAACCTCTCTTA+AGG | - | chr7.2:6861138-6861157 | None:intergenic | 35.0% | |
AGTATCACTGAAATGAAAGC+CGG | - | chr7.2:6858719-6858738 | None:intergenic | 35.0% | |
ATCAAACACTTTCTCTGGTT+GGG | - | chr7.2:6858743-6858762 | None:intergenic | 35.0% | |
ATCAATACCCAAAACTCTTG+GGG | - | chr7.2:6859925-6859944 | None:intergenic | 35.0% | |
ATCTACTGCATCAAACTCAA+TGG | + | chr7.2:6860490-6860509 | MS.gene23020:CDS | 35.0% | |
ATGGTAAGTCAAAGCAAGAA+TGG | - | chr7.2:6857929-6857948 | None:intergenic | 35.0% | |
ATTGCTGTGAACTTCATCTT+TGG | + | chr7.2:6861790-6861809 | MS.gene23020:intron | 35.0% | |
CAAAAATCTCCGTTTCTTGA+TGG | - | chr7.2:6857495-6857514 | None:intergenic | 35.0% | |
CAAAACCTCTCTTAAGGAAA+TGG | - | chr7.2:6861132-6861151 | None:intergenic | 35.0% | |
CATCAATACCCAAAACTCTT+GGG | - | chr7.2:6859926-6859945 | None:intergenic | 35.0% | |
CATCATTTCTGATGTGGATT+TGG | - | chr7.2:6860273-6860292 | None:intergenic | 35.0% | |
CTAGGTAGATGTAATTGGTT+TGG | + | chr7.2:6861853-6861872 | MS.gene23020:CDS | 35.0% | |
CTTGCAACTACTTCCTTATT+AGG | - | chr7.2:6860859-6860878 | None:intergenic | 35.0% | |
GAAGAACAATAATGTTGAGG+AGG | + | chr7.2:6859668-6859687 | MS.gene23020:CDS | 35.0% | |
GAAGTTGTTGTATCTGAACT+AGG | + | chr7.2:6861513-6861532 | MS.gene23020:intron | 35.0% | |
GAGATTGATCCATCAAAAAC+AGG | - | chr7.2:6857026-6857045 | None:intergenic | 35.0% | |
GAGGGATATGAAAAAGGAAA+AGG | + | chr7.2:6860658-6860677 | MS.gene23020:CDS | 35.0% | |
GATGAAGCTAAAGATGCAAA+TGG | + | chr7.2:6857460-6857479 | MS.gene23020:CDS | 35.0% | |
GATTCTTGGGATTATCCAAA+AGG | + | chr7.2:6859870-6859889 | MS.gene23020:CDS | 35.0% | |
GTACTTGTCATCAATAGATG+TGG | + | chr7.2:6858159-6858178 | MS.gene23020:CDS | 35.0% | |
TACTTGCACTATAGTTTCCT+TGG | - | chr7.2:6858951-6858970 | None:intergenic | 35.0% | |
TCATCAATACCCAAAACTCT+TGG | - | chr7.2:6859927-6859946 | None:intergenic | 35.0% | |
TCCTTATTAGGTTTGATGTG+TGG | - | chr7.2:6860847-6860866 | None:intergenic | 35.0% | |
TCCTTCAAAAGTGAAGACTT+TGG | - | chr7.2:6860230-6860249 | None:intergenic | 35.0% | |
TGACAGTAATAACTCTCTCA+AGG | + | chr7.2:6858552-6858571 | MS.gene23020:CDS | 35.0% | |
TGACCTGTGGTTTCAATATT+AGG | + | chr7.2:6860945-6860964 | MS.gene23020:intron | 35.0% | |
TGCGAAATGTATCTTCTTGT+AGG | + | chr7.2:6858854-6858873 | MS.gene23020:CDS | 35.0% | |
TTCACTGCATATTGATGAAC+TGG | - | chr7.2:6859469-6859488 | None:intergenic | 35.0% | |
TTGTTCATTGACAAGATGGA+AGG | - | chr7.2:6861158-6861177 | None:intergenic | 35.0% | |
TTTAGTCCAAGAACCAACAA+TGG | + | chr7.2:6858525-6858544 | MS.gene23020:CDS | 35.0% | |
! | ATTGTAAGTTTGCTTGCTAG+CGG | - | chr7.2:6859364-6859383 | None:intergenic | 35.0% |
! | CTGCTCTTATTCTGGATTTT+GGG | - | chr7.2:6859558-6859577 | None:intergenic | 35.0% |
! | GTTTTTCATTCTTCAGCTAG+TGG | + | chr7.2:6861018-6861037 | MS.gene23020:intron | 35.0% |
! | TATTGTTCTTCTCTCTAGGA+TGG | - | chr7.2:6859659-6859678 | None:intergenic | 35.0% |
! | TCAAGAAACGGAGATTTTTG+AGG | + | chr7.2:6857495-6857514 | MS.gene23020:CDS | 35.0% |
! | TCTGCTCTTATTCTGGATTT+TGG | - | chr7.2:6859559-6859578 | None:intergenic | 35.0% |
! | TGAAAGTGTATCACATGAAG+AGG | + | chr7.2:6859485-6859504 | MS.gene23020:CDS | 35.0% |
! | TTTTCCATCTGCTCTTATTC+TGG | - | chr7.2:6859566-6859585 | None:intergenic | 35.0% |
!! | ACTTAGTATTGACACACTCA+TGG | + | chr7.2:6860582-6860601 | MS.gene23020:CDS | 35.0% |
!! | AGTTGGTGAAAGATTTCTTC+AGG | + | chr7.2:6857702-6857721 | MS.gene23020:CDS | 35.0% |
!! | GATGTCATTTGGAACTTTTG+AGG | + | chr7.2:6861356-6861375 | MS.gene23020:intron | 35.0% |
!! | TAGATGTAATTGGTTTGGGA+AGG | + | chr7.2:6861858-6861877 | MS.gene23020:CDS | 35.0% |
!! | TCTTTCAATTTTGGAAGCCA+TGG | + | chr7.2:6858376-6858395 | MS.gene23020:CDS | 35.0% |
!! | TTCTTCTTTCTAGAATGGCT+TGG | - | chr7.2:6859603-6859622 | None:intergenic | 35.0% |
!! | TTTCTGGCTTCTTCTCTTAT+AGG | - | chr7.2:6858407-6858426 | None:intergenic | 35.0% |
AAATCAAATGCCACAGCTTG+TGG | + | chr7.2:6857808-6857827 | MS.gene23020:CDS | 40.0% | |
AAATCTTGTCTCAGGGGAAA+TGG | + | chr7.2:6859392-6859411 | MS.gene23020:CDS | 40.0% | |
AACCTCTCTTAAGGAAATGG+CGG | - | chr7.2:6861129-6861148 | None:intergenic | 40.0% | |
AATACAGGCAAAGTGACAGT+TGG | + | chr7.2:6857685-6857704 | MS.gene23020:CDS | 40.0% | |
AATATCCACGTTGTCTCTTG+CGG | - | chr7.2:6858599-6858618 | None:intergenic | 40.0% | |
AATCAAATGCCACAGCTTGT+GGG | + | chr7.2:6857809-6857828 | MS.gene23020:CDS | 40.0% | |
AATGGATGTGATGAGAACCA+AGG | + | chr7.2:6858469-6858488 | MS.gene23020:CDS | 40.0% | |
AATGTGCTTGAAGGTGACAA+AGG | + | chr7.2:6858028-6858047 | MS.gene23020:intron | 40.0% | |
ACATAGCAGGTAGACATTGA+TGG | - | chr7.2:6858090-6858109 | None:intergenic | 40.0% | |
AGACTCAAATCTTGTCTCAG+GGG | + | chr7.2:6859386-6859405 | MS.gene23020:CDS | 40.0% | |
AGTGCAATAGAATGTGAACC+AGG | - | chr7.2:6858823-6858842 | None:intergenic | 40.0% | |
AGTGGCATGCATAGATGAAT+AGG | - | chr7.2:6860912-6860931 | None:intergenic | 40.0% | |
ATCTACTAGCTCATATGGTG+TGG | + | chr7.2:6859773-6859792 | MS.gene23020:CDS | 40.0% | |
ATGTGAGTATGAGACAGAAG+TGG | + | chr7.2:6857633-6857652 | MS.gene23020:CDS | 40.0% | |
CAAGACTCAAATCTTGTCTC+AGG | + | chr7.2:6859384-6859403 | MS.gene23020:CDS | 40.0% | |
CATCAAACACTTTCTCTGGT+TGG | - | chr7.2:6858744-6858763 | None:intergenic | 40.0% | |
CCAGTTATCATATCCTCTAC+AGG | - | chr7.2:6857607-6857626 | None:intergenic | 40.0% | |
CCTGTAGAGGATATGATAAC+TGG | + | chr7.2:6857604-6857623 | MS.gene23020:CDS | 40.0% | |
CTCTGAATCCTCTACAATCT+CGG | - | chr7.2:6857584-6857603 | None:intergenic | 40.0% | |
CTTCAGAACCAAGGAAAATG+TGG | + | chr7.2:6858439-6858458 | MS.gene23020:CDS | 40.0% | |
CTTGTCTGCTATGAAATGAG+TGG | - | chr7.2:6860519-6860538 | None:intergenic | 40.0% | |
GATGCATCAAACACTTTCTC+TGG | - | chr7.2:6858748-6858767 | None:intergenic | 40.0% | |
GATTATCCAAAAGGACCAAG+AGG | + | chr7.2:6859879-6859898 | MS.gene23020:CDS | 40.0% | |
GGAAAATGTGGTGCAAGTAA+TGG | + | chr7.2:6858451-6858470 | MS.gene23020:CDS | 40.0% | |
TAAGGAAGTAGTTGCAAGCT+TGG | + | chr7.2:6860861-6860880 | MS.gene23020:CDS | 40.0% | |
TACTGTCAGCCCATTTGAAA+GGG | - | chr7.2:6858309-6858328 | None:intergenic | 40.0% | |
TCAAAAGTGAAGACTTTGGC+AGG | - | chr7.2:6860226-6860245 | None:intergenic | 40.0% | |
TCAAAATGGAAAGACCGCTA+TGG | + | chr7.2:6858198-6858217 | MS.gene23020:CDS | 40.0% | |
TCAAACACTTTCTCTGGTTG+GGG | - | chr7.2:6858742-6858761 | None:intergenic | 40.0% | |
TCAAATAGCTGCTGAAGCTA+TGG | + | chr7.2:6858669-6858688 | MS.gene23020:CDS | 40.0% | |
TCAGGATAAAAGTAGTCCAG+CGG | + | chr7.2:6857720-6857739 | MS.gene23020:CDS | 40.0% | |
TGAGCATCATATGACATAGC+AGG | - | chr7.2:6858103-6858122 | None:intergenic | 40.0% | |
TGCACGTACAAAGAATATGC+TGG | + | chr7.2:6860541-6860560 | MS.gene23020:CDS | 40.0% | |
TGCGTTGTTCATTGACAAGA+TGG | - | chr7.2:6861162-6861181 | None:intergenic | 40.0% | |
TGTTCCACTAGAAGTCTAGA+GGG | + | chr7.2:6859963-6859982 | MS.gene23020:CDS | 40.0% | |
TTACTGTCAGCCCATTTGAA+AGG | - | chr7.2:6858310-6858329 | None:intergenic | 40.0% | |
TTCTCTTATAGGTCAGTCCA+TGG | - | chr7.2:6858396-6858415 | None:intergenic | 40.0% | |
TTGAAGGAACTTAGCAGGTT+AGG | + | chr7.2:6860242-6860261 | MS.gene23020:CDS | 40.0% | |
TTGAGGTGATTTCTCCATAG+CGG | - | chr7.2:6858215-6858234 | None:intergenic | 40.0% | |
TTGTATCTGAACTAGGTACG+CGG | + | chr7.2:6861520-6861539 | MS.gene23020:intron | 40.0% | |
! | AGGAGCTGCTATTTACAGTT+CGG | + | chr7.2:6861232-6861251 | MS.gene23020:intron | 40.0% |
! | ATTCTGGATTTTGGGCTCTT+TGG | - | chr7.2:6859550-6859569 | None:intergenic | 40.0% |
! | CTTTTTCCTCTTGGTCCTTT+TGG | - | chr7.2:6859888-6859907 | None:intergenic | 40.0% |
! | GAGATTTTCCAACCCAGTTT+CGG | - | chr7.2:6857548-6857567 | None:intergenic | 40.0% |
! | TAAGACCACAAGGCACTTAA+GGG | + | chr7.2:6861606-6861625 | MS.gene23020:intron | 40.0% |
! | TACTTGCACCACATTTTCCT+TGG | - | chr7.2:6858450-6858469 | None:intergenic | 40.0% |
! | TTAAGACCACAAGGCACTTA+AGG | + | chr7.2:6861605-6861624 | MS.gene23020:intron | 40.0% |
! | TTACCTTCTGTTGTTGCTTG+AGG | - | chr7.2:6860370-6860389 | None:intergenic | 40.0% |
! | TTTGAGTTTGCTTGCTCACA+TGG | - | chr7.2:6857790-6857809 | None:intergenic | 40.0% |
! | TTTGGTGTGTTAAGACCACA+AGG | + | chr7.2:6861596-6861615 | MS.gene23020:intron | 40.0% |
!! | ACATTTTCCTTGCTTGCTAG+CGG | - | chr7.2:6858902-6858921 | None:intergenic | 40.0% |
!! | CACTTTTGAAGGAACTTAGC+AGG | + | chr7.2:6860237-6860256 | MS.gene23020:CDS | 40.0% |
!! | GATTTTTGAGGACACCTTAG+TGG | + | chr7.2:6857507-6857526 | MS.gene23020:CDS | 40.0% |
!! | GCCAAAGTCTTCACTTTTGA+AGG | + | chr7.2:6860226-6860245 | MS.gene23020:CDS | 40.0% |
!!! | GAAGACGACTACCTTTTTTC+TGG | - | chr7.2:6858423-6858442 | None:intergenic | 40.0% |
AAGACAAAAGCCACTCCTGA+AGG | + | chr7.2:6860718-6860737 | MS.gene23020:CDS | 45.0% | |
ACAACTTCAAGAGTGGCAAC+TGG | - | chr7.2:6861501-6861520 | None:intergenic | 45.0% | |
AGCTTGGTTACTGCTGTTCA+TGG | + | chr7.2:6860877-6860896 | MS.gene23020:CDS | 45.0% | |
ATAGCATCACCAGCTGAAAC+TGG | - | chr7.2:6860020-6860039 | None:intergenic | 45.0% | |
ATGGTCCATTCACCGAAACT+GGG | + | chr7.2:6857533-6857552 | MS.gene23020:CDS | 45.0% | |
CTACATGTCTGTGTCGTGTT+TGG | + | chr7.2:6857305-6857324 | MS.gene23020:intron | 45.0% | |
CTGCTGGTAACTGATATCTG+CGG | - | chr7.2:6859837-6859856 | None:intergenic | 45.0% | |
CTGTGAACTTCATCTTTGGC+AGG | + | chr7.2:6861794-6861813 | MS.gene23020:intron | 45.0% | |
CTGTTCCACTAGAAGTCTAG+AGG | + | chr7.2:6859962-6859981 | MS.gene23020:CDS | 45.0% | |
GCTAGCAAGCAAGGAAAATG+TGG | + | chr7.2:6858901-6858920 | MS.gene23020:CDS | 45.0% | |
GCTTGCTCACATGGTAACTT+AGG | - | chr7.2:6857781-6857800 | None:intergenic | 45.0% | |
GGTTTGGGAAGGTTTACAGA+AGG | + | chr7.2:6861869-6861888 | MS.gene23020:CDS | 45.0% | |
TACAATGCAGTACTGCACAG+TGG | - | chr7.2:6857128-6857147 | None:intergenic | 45.0% | |
TAGCATCACCAGCTGAAACT+GGG | - | chr7.2:6860019-6860038 | None:intergenic | 45.0% | |
TCAACATGTGCCAGCAACAA+GGG | - | chr7.2:6860071-6860090 | None:intergenic | 45.0% | |
TCCAGCGGTGAACAATTCTT+CGG | + | chr7.2:6857735-6857754 | MS.gene23020:CDS | 45.0% | |
TCTATCCTCCTTGCAGATCT+TGG | + | chr7.2:6860454-6860473 | MS.gene23020:intron | 45.0% | |
TGCTGAAGCTATGGATGCTT+TGG | + | chr7.2:6858678-6858697 | MS.gene23020:CDS | 45.0% | |
TGTCCTCAAGCAACAACAGA+AGG | + | chr7.2:6860364-6860383 | MS.gene23020:CDS | 45.0% | |
TTACTGTCAGCTGCCATTGT+TGG | - | chr7.2:6858541-6858560 | None:intergenic | 45.0% | |
TTCAACATGTGCCAGCAACA+AGG | - | chr7.2:6860072-6860091 | None:intergenic | 45.0% | |
TTTCACCCTTAAGTGCCTTG+TGG | - | chr7.2:6861614-6861633 | None:intergenic | 45.0% | |
! | AGCTAATGCCCCAAGAGTTT+TGG | + | chr7.2:6859914-6859933 | MS.gene23020:CDS | 45.0% |
! | AGTTCGGAGCTTGTTCTGAA+TGG | + | chr7.2:6861248-6861267 | MS.gene23020:CDS | 45.0% |
! | GCTAATGCCCCAAGAGTTTT+GGG | + | chr7.2:6859915-6859934 | MS.gene23020:CDS | 45.0% |
! | GCTCGCTTTCTTTTTCCTCT+TGG | - | chr7.2:6859897-6859916 | None:intergenic | 45.0% |
! | TTACCAGAAGGTGCAGATGA+AGG | - | chr7.2:6856816-6856835 | None:intergenic | 45.0% |
!! | AGGTTTACAGAAGGCGTTTG+AGG | + | chr7.2:6861878-6861897 | MS.gene23020:CDS | 45.0% |
!! | ATTTTGGGCTCTTTGGAAGC+AGG | - | chr7.2:6859543-6859562 | None:intergenic | 45.0% |
!! | GAGGAAGGGAAAGTGTTTAG+TGG | + | chr7.2:6859707-6859726 | MS.gene23020:CDS | 45.0% |
!! | TACATGTGTCGGTGTTGTGT+AGG | - | chr7.2:6857243-6857262 | None:intergenic | 45.0% |
!! | TTCTTCTCTCTAGGATGGCT+TGG | - | chr7.2:6859654-6859673 | None:intergenic | 45.0% |
AAACCTAGTGCAGCTACGGT+TGG | - | chr7.2:6858130-6858149 | None:intergenic | 50.0% | |
AAGACGTGCCAAGATCTGCA+AGG | - | chr7.2:6860465-6860484 | None:intergenic | 50.0% | |
ACAAGGGACGCATATCATGC+AGG | - | chr7.2:6860055-6860074 | None:intergenic | 50.0% | |
ACCAGATTTCCCACAAGCTG+TGG | - | chr7.2:6857821-6857840 | None:intergenic | 50.0% | |
ACCGAAGAATTGTTCACCGC+TGG | - | chr7.2:6857739-6857758 | None:intergenic | 50.0% | |
ACCTCTCGAGTTCCAACTTC+TGG | - | chr7.2:6861283-6861302 | None:intergenic | 50.0% | |
ACTGAAATGAAAGCCGGCAG+GGG | - | chr7.2:6858713-6858732 | None:intergenic | 50.0% | |
AGAGGATTCAGAGCCTGTAG+AGG | + | chr7.2:6857591-6857610 | MS.gene23020:CDS | 50.0% | |
ATCTAGTTGCTTCGCTCTGC+AGG | + | chr7.2:6860801-6860820 | MS.gene23020:intron | 50.0% | |
ATGCTGGAAGCAATGGCTCT+TGG | + | chr7.2:6860557-6860576 | MS.gene23020:CDS | 50.0% | |
CAACCTTCATCTGCACCTTC+TGG | + | chr7.2:6856810-6856829 | MS.gene23020:CDS | 50.0% | |
CACGAAACCTAGTGCAGCTA+CGG | - | chr7.2:6858134-6858153 | None:intergenic | 50.0% | |
CACTCATGGCTTGAGAGTTG+TGG | + | chr7.2:6860596-6860615 | MS.gene23020:CDS | 50.0% | |
CACTGAAATGAAAGCCGGCA+GGG | - | chr7.2:6858714-6858733 | None:intergenic | 50.0% | |
CATGAAGAGGTCTGCTTACG+AGG | + | chr7.2:6859498-6859517 | MS.gene23020:CDS | 50.0% | |
CCGACACTTGTGAATGAAGC+CGG | + | chr7.2:6857214-6857233 | MS.gene23020:intron | 50.0% | |
CCGGCTTCATTCACAAGTGT+CGG | - | chr7.2:6857217-6857236 | None:intergenic | 50.0% | |
CGACACAGACATGTAGACAC+CGG | - | chr7.2:6857301-6857320 | None:intergenic | 50.0% | |
CTAGCTCATATGGTGTGGCT+AGG | + | chr7.2:6859778-6859797 | MS.gene23020:CDS | 50.0% | |
CTCAAGTCTCAAGTGCGAGA+GGG | + | chr7.2:6858230-6858249 | MS.gene23020:CDS | 50.0% | |
CTTGCTCGAGCAAGAGAAAC+TGG | - | chr7.2:6860701-6860720 | None:intergenic | 50.0% | |
GAAGAGCAGTTTGAACCACC+AGG | + | chr7.2:6859800-6859819 | MS.gene23020:CDS | 50.0% | |
GAATGGACCATCGACCACTA+AGG | - | chr7.2:6857524-6857543 | None:intergenic | 50.0% | |
GATGGTCCATTCACCGAAAC+TGG | + | chr7.2:6857532-6857551 | MS.gene23020:CDS | 50.0% | |
GCTTCAGTTGCTCCATGTGA+AGG | + | chr7.2:6860137-6860156 | MS.gene23020:CDS | 50.0% | |
GCTTGTGGGAAATCTGGTAC+TGG | + | chr7.2:6857823-6857842 | MS.gene23020:CDS | 50.0% | |
GGTAGTCGTCTTCAGAACCA+AGG | + | chr7.2:6858430-6858449 | MS.gene23020:CDS | 50.0% | |
GGTTACTGCTGTTCATGGTC+AGG | + | chr7.2:6860882-6860901 | MS.gene23020:CDS | 50.0% | |
GTGTTTAGTGGCAGATCCAG+TGG | + | chr7.2:6859719-6859738 | MS.gene23020:CDS | 50.0% | |
TCACTGAAATGAAAGCCGGC+AGG | - | chr7.2:6858715-6858734 | None:intergenic | 50.0% | |
TCCAACCCAGTTTCGGTGAA+TGG | - | chr7.2:6857541-6857560 | None:intergenic | 50.0% | |
TCCAGAAGTTGGAACTCGAG+AGG | + | chr7.2:6861279-6861298 | MS.gene23020:CDS | 50.0% | |
TCCATTCACCGAAACTGGGT+TGG | + | chr7.2:6857537-6857556 | MS.gene23020:CDS | 50.0% | |
TCTAAGTCCGCTAGCAAGCA+AGG | + | chr7.2:6858892-6858911 | MS.gene23020:CDS | 50.0% | |
TCTAGTTGCTTCGCTCTGCA+GGG | + | chr7.2:6860802-6860821 | MS.gene23020:intron | 50.0% | |
TGATATGCGTCCCTTGTTGC+TGG | + | chr7.2:6860058-6860077 | MS.gene23020:CDS | 50.0% | |
TGCCGCCATTTCCTTAAGAG+AGG | + | chr7.2:6861124-6861143 | MS.gene23020:CDS | 50.0% | |
TGCGAGAGGGTCAATTAGTC+TGG | + | chr7.2:6858243-6858262 | MS.gene23020:CDS | 50.0% | |
TGCTGGAAGCAATGGCTCTT+GGG | + | chr7.2:6860558-6860577 | MS.gene23020:CDS | 50.0% | |
TGTCTTCTCCCAGTTTCAGC+TGG | + | chr7.2:6860008-6860027 | MS.gene23020:CDS | 50.0% | |
! | TCCAGTGGTGTCAGACGTTA+AGG | + | chr7.2:6859734-6859753 | MS.gene23020:CDS | 50.0% |
! | TCTGCGGACTAACTTCAACC+TGG | - | chr7.2:6859821-6859840 | None:intergenic | 50.0% |
!! | AGAAGTGGTGCTTGATAGCG+AGG | + | chr7.2:6857648-6857667 | MS.gene23020:CDS | 50.0% |
!! | CAGCTGCCATTGTTGGTTCT+TGG | - | chr7.2:6858534-6858553 | None:intergenic | 50.0% |
!! | GTCTGTGTCGTGTTTGGTGT+TGG | + | chr7.2:6857311-6857330 | MS.gene23020:intron | 50.0% |
ACGTGCCAAGATCTGCAAGG+AGG | - | chr7.2:6860462-6860481 | None:intergenic | 55.0% | |
AGAGGTCTGCTTACGAGGAG+AGG | + | chr7.2:6859503-6859522 | MS.gene23020:CDS | 55.0% | |
ATGTGCCGCAAGAGACAACG+TGG | + | chr7.2:6858591-6858610 | MS.gene23020:CDS | 55.0% | |
CCACAGCTGCAATTGACCTG+TGG | + | chr7.2:6860932-6860951 | MS.gene23020:intron | 55.0% | |
CCACAGGTCAATTGCAGCTG+TGG | - | chr7.2:6860935-6860954 | None:intergenic | 55.0% | |
CCTCAAGTCTCAAGTGCGAG+AGG | + | chr7.2:6858229-6858248 | MS.gene23020:CDS | 55.0% | |
CCTCTCGCACTTGAGACTTG+AGG | - | chr7.2:6858232-6858251 | None:intergenic | 55.0% | |
CGTAGCTGCACTAGGTTTCG+TGG | + | chr7.2:6858132-6858151 | MS.gene23020:CDS | 55.0% | |
GAGGACACCTTAGTGGTCGA+TGG | + | chr7.2:6857514-6857533 | MS.gene23020:CDS | 55.0% | |
GAGGTCTGCTTACGAGGAGA+GGG | + | chr7.2:6859504-6859523 | MS.gene23020:CDS | 55.0% | |
GCCACAGCTTGTGGGAAATC+TGG | + | chr7.2:6857817-6857836 | MS.gene23020:CDS | 55.0% | |
GCCTTAACGTCTGACACCAC+TGG | - | chr7.2:6859738-6859757 | None:intergenic | 55.0% | |
GGTCAATTGCAGCTGTGGAG+TGG | - | chr7.2:6860930-6860949 | None:intergenic | 55.0% | |
TCACCAACCGTAGCTGCACT+AGG | + | chr7.2:6858124-6858143 | MS.gene23020:CDS | 55.0% | |
TCGGCCCTCTAGACTTCTAG+TGG | - | chr7.2:6859970-6859989 | None:intergenic | 55.0% | |
TGCGGTGCTCATTGCGTGTA+TGG | - | chr7.2:6860184-6860203 | None:intergenic | 55.0% | |
! | GCGGACTAACTTCAACCTGG+TGG | - | chr7.2:6859818-6859837 | None:intergenic | 55.0% |
!! | GTCGGTGTTGTGTAGGTGTC+CGG | - | chr7.2:6857236-6857255 | None:intergenic | 55.0% |
AAAGCCGGCAGGGGACAGAT+TGG | - | chr7.2:6858704-6858723 | None:intergenic | 60.0% | |
TTGGCCAATCTGTCCCCTGC+CGG | + | chr7.2:6858697-6858716 | MS.gene23020:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 6856798 | 6861912 | 6856798 | ID=MS.gene23020 |
chr7.2 | mRNA | 6856798 | 6861912 | 6856798 | ID=MS.gene23020.t1;Parent=MS.gene23020 |
chr7.2 | exon | 6856798 | 6856831 | 6856798 | ID=MS.gene23020.t1.exon1;Parent=MS.gene23020.t1 |
chr7.2 | CDS | 6856798 | 6856831 | 6856798 | ID=cds.MS.gene23020.t1;Parent=MS.gene23020.t1 |
chr7.2 | exon | 6857458 | 6857844 | 6857458 | ID=MS.gene23020.t1.exon2;Parent=MS.gene23020.t1 |
chr7.2 | CDS | 6857458 | 6857844 | 6857458 | ID=cds.MS.gene23020.t1;Parent=MS.gene23020.t1 |
chr7.2 | exon | 6858041 | 6860385 | 6858041 | ID=MS.gene23020.t1.exon3;Parent=MS.gene23020.t1 |
chr7.2 | CDS | 6858041 | 6860385 | 6858041 | ID=cds.MS.gene23020.t1;Parent=MS.gene23020.t1 |
chr7.2 | exon | 6860470 | 6860739 | 6860470 | ID=MS.gene23020.t1.exon4;Parent=MS.gene23020.t1 |
chr7.2 | CDS | 6860470 | 6860739 | 6860470 | ID=cds.MS.gene23020.t1;Parent=MS.gene23020.t1 |
chr7.2 | exon | 6860823 | 6860903 | 6860823 | ID=MS.gene23020.t1.exon5;Parent=MS.gene23020.t1 |
chr7.2 | CDS | 6860823 | 6860903 | 6860823 | ID=cds.MS.gene23020.t1;Parent=MS.gene23020.t1 |
chr7.2 | exon | 6861034 | 6861145 | 6861034 | ID=MS.gene23020.t1.exon6;Parent=MS.gene23020.t1 |
chr7.2 | CDS | 6861034 | 6861145 | 6861034 | ID=cds.MS.gene23020.t1;Parent=MS.gene23020.t1 |
chr7.2 | exon | 6861234 | 6861300 | 6861234 | ID=MS.gene23020.t1.exon7;Parent=MS.gene23020.t1 |
chr7.2 | CDS | 6861234 | 6861300 | 6861234 | ID=cds.MS.gene23020.t1;Parent=MS.gene23020.t1 |
chr7.2 | exon | 6861816 | 6861912 | 6861816 | ID=MS.gene23020.t1.exon8;Parent=MS.gene23020.t1 |
chr7.2 | CDS | 6861816 | 6861912 | 6861816 | ID=cds.MS.gene23020.t1;Parent=MS.gene23020.t1 |
Gene Sequence |
Protein sequence |