Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23997.t1 | XP_013468422.1 | 95.5 | 616 | 26 | 2 | 1 | 615 | 1 | 615 | 0.00E+00 | 1185.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23997.t1 | Q7XJ98 | 72.6 | 621 | 153 | 7 | 1 | 613 | 5 | 616 | 7.5e-261 | 901.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23997.t1 | A0A072VKC5 | 95.5 | 616 | 26 | 2 | 1 | 615 | 1 | 615 | 0.0e+00 | 1185.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene23997 | 0.840302 | 9.44E-58 | -1.69E-46 |
| MS.gene050894 | MS.gene23997 | 0.818932 | 1.51E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23997.t1 | MTR_1g069460 | 97.078 | 616 | 16 | 2 | 1 | 615 | 1 | 615 | 0.0 | 1241 |
| MS.gene23997.t1 | MTR_7g098650 | 76.105 | 611 | 70 | 6 | 3 | 612 | 1 | 536 | 0.0 | 941 |
| MS.gene23997.t1 | MTR_4g129930 | 56.250 | 400 | 170 | 3 | 152 | 547 | 69 | 467 | 4.08e-170 | 493 |
| MS.gene23997.t1 | MTR_3g084400 | 52.358 | 424 | 194 | 4 | 151 | 567 | 61 | 483 | 4.09e-168 | 488 |
| MS.gene23997.t1 | MTR_5g055350 | 53.349 | 418 | 179 | 5 | 140 | 546 | 35 | 447 | 8.75e-162 | 471 |
| MS.gene23997.t1 | MTR_5g095940 | 53.102 | 403 | 183 | 3 | 152 | 548 | 92 | 494 | 6.21e-154 | 452 |
| MS.gene23997.t1 | MTR_3g007840 | 50.370 | 405 | 168 | 5 | 152 | 548 | 20 | 399 | 3.99e-140 | 414 |
| MS.gene23997.t1 | MTR_5g095950 | 45.921 | 429 | 192 | 6 | 152 | 572 | 65 | 461 | 1.34e-130 | 392 |
| MS.gene23997.t1 | MTR_1g035730 | 45.026 | 382 | 201 | 3 | 159 | 538 | 77 | 451 | 1.45e-114 | 350 |
| MS.gene23997.t1 | MTR_5g010370 | 40.988 | 405 | 224 | 7 | 147 | 545 | 151 | 546 | 5.44e-110 | 341 |
| MS.gene23997.t1 | MTR_1g102430 | 43.073 | 397 | 214 | 7 | 151 | 540 | 97 | 488 | 4.37e-106 | 329 |
| MS.gene23997.t1 | MTR_5g010350 | 41.728 | 405 | 221 | 7 | 147 | 545 | 127 | 522 | 1.95e-104 | 326 |
| MS.gene23997.t1 | MTR_4g119810 | 36.552 | 435 | 239 | 10 | 128 | 541 | 26 | 444 | 2.44e-84 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23997.t1 | AT2G20370 | 73.194 | 623 | 146 | 8 | 1 | 613 | 5 | 616 | 0.0 | 922 |
| MS.gene23997.t1 | AT2G29040 | 56.444 | 450 | 183 | 6 | 144 | 587 | 288 | 730 | 0.0 | 543 |
| MS.gene23997.t1 | AT4G13990 | 50.957 | 418 | 200 | 4 | 154 | 567 | 95 | 511 | 6.78e-161 | 471 |
| MS.gene23997.t1 | AT4G13990 | 50.957 | 418 | 200 | 4 | 154 | 567 | 95 | 511 | 6.78e-161 | 471 |
| MS.gene23997.t1 | AT2G32750 | 49.761 | 418 | 202 | 4 | 141 | 552 | 72 | 487 | 2.77e-158 | 464 |
| MS.gene23997.t1 | AT2G32750 | 49.761 | 418 | 202 | 4 | 141 | 552 | 70 | 485 | 3.09e-158 | 464 |
| MS.gene23997.t1 | AT2G32740 | 46.602 | 412 | 209 | 6 | 143 | 545 | 55 | 464 | 3.96e-142 | 421 |
| MS.gene23997.t1 | AT2G31990 | 50.000 | 406 | 192 | 7 | 152 | 547 | 70 | 474 | 2.00e-141 | 420 |
| MS.gene23997.t1 | AT2G31990 | 50.000 | 406 | 192 | 7 | 152 | 547 | 78 | 482 | 2.00e-141 | 420 |
| MS.gene23997.t1 | AT2G31990 | 50.000 | 406 | 192 | 7 | 152 | 547 | 116 | 520 | 7.22e-141 | 420 |
| MS.gene23997.t1 | AT1G68470 | 45.812 | 382 | 193 | 6 | 159 | 537 | 73 | 443 | 2.78e-113 | 347 |
| MS.gene23997.t1 | AT5G62220 | 43.719 | 398 | 216 | 5 | 154 | 546 | 118 | 512 | 5.68e-111 | 343 |
| MS.gene23997.t1 | AT5G41250 | 40.201 | 398 | 222 | 7 | 149 | 542 | 172 | 557 | 1.77e-107 | 335 |
| MS.gene23997.t1 | AT1G63450 | 40.842 | 404 | 223 | 8 | 144 | 541 | 267 | 660 | 2.21e-107 | 338 |
| MS.gene23997.t1 | AT4G22580 | 36.409 | 401 | 236 | 8 | 154 | 541 | 37 | 431 | 2.53e-80 | 260 |
Find 150 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTGCACGTTATCTT+TGG | 0.193030 | 1.3:+48906307 | MS.gene23997:CDS |
| CCGTGGAATGCAAATGATTT+TGG | 0.193783 | 1.3:+48906552 | MS.gene23997:CDS |
| CAACCGCCTCCGAGGAAAAT+TGG | 0.202255 | 1.3:+48905844 | MS.gene23997:CDS |
| AGTGTAAAAGTTTGAGTCTT+TGG | 0.218524 | 1.3:+48906082 | MS.gene23997:CDS |
| CTCCCTGACCAAATGGAAAA+AGG | 0.223737 | 1.3:+48905592 | MS.gene23997:CDS |
| CTCATGATTCTCACTTGTTC+AGG | 0.224742 | 1.3:-48907047 | None:intergenic |
| TGATATTGCACGTTATCTTT+GGG | 0.257423 | 1.3:+48906308 | MS.gene23997:CDS |
| TCCTTCTTCTCCTCCTTCTC+AGG | 0.281758 | 1.3:-48905937 | None:intergenic |
| TTCTCCTCCTTCTCAGGGAC+AGG | 0.298751 | 1.3:-48905931 | None:intergenic |
| GAATACTTGGTATAATTCTT+AGG | 0.301851 | 1.3:-48906954 | None:intergenic |
| TTCTCCGGTTGGTAAGCTTT+TGG | 0.334154 | 1.3:+48906740 | MS.gene23997:CDS |
| AACAGAAACAGGTGTTGATT+TGG | 0.343201 | 1.3:-48905761 | None:intergenic |
| CTCTTTACCGCAACAGGGTC+AGG | 0.348005 | 1.3:-48905901 | None:intergenic |
| GCCTTTGATTCCATGTTGGC+TGG | 0.352901 | 1.3:+48906873 | MS.gene23997:CDS |
| TAGTAGTATTATCAGCTCTA+AGG | 0.355547 | 1.3:-48905705 | None:intergenic |
| TTTACTACCAATGCTGGTCT+TGG | 0.356831 | 1.3:+48906120 | MS.gene23997:CDS |
| GTGTCACTCTTTACCGCAAC+AGG | 0.361158 | 1.3:-48905907 | None:intergenic |
| CTGATTGATTTGGCATTGTC+AGG | 0.361929 | 1.3:-48906690 | None:intergenic |
| GTGTCATTCTTTATCACAAC+AGG | 0.366075 | 1.3:-48905877 | None:intergenic |
| TTGATGTTATATTTAGCAAT+AGG | 0.366737 | 1.3:+48906211 | MS.gene23997:CDS |
| ACAGTTCTGCTTGCAACCTC+AGG | 0.370804 | 1.3:+48906827 | MS.gene23997:CDS |
| CTGACAATGCCAAATCAATC+AGG | 0.371478 | 1.3:+48906691 | MS.gene23997:CDS |
| TTCTTTATCACAACAGGGTC+AGG | 0.396330 | 1.3:-48905871 | None:intergenic |
| TAACTGACCCCTGATTGATT+TGG | 0.399847 | 1.3:-48906700 | None:intergenic |
| CTTCGCTTGATCTGGTTGAC+TGG | 0.401762 | 1.3:+48906358 | MS.gene23997:CDS |
| GGATGCGGCTTCGCTTGATC+TGG | 0.401985 | 1.3:+48906350 | MS.gene23997:CDS |
| CCGCCGCTTGAGAATGTTGA+AGG | 0.412234 | 1.3:+48906144 | MS.gene23997:CDS |
| ATGTGCATGATCTTCCTTCA+AGG | 0.413105 | 1.3:+48906037 | MS.gene23997:CDS |
| TCATCAAAATGAACAGAAAC+AGG | 0.419490 | 1.3:-48905772 | None:intergenic |
| AACCGCCTCCGAGGAAAATT+GGG | 0.428718 | 1.3:+48905845 | MS.gene23997:CDS |
| ATGAGACGGCGCCCTGTGGC+GGG | 0.436273 | 1.3:+48905565 | MS.gene23997:CDS |
| TTGACAAAGTTACACATTTG+AGG | 0.437236 | 1.3:+48907171 | MS.gene23997:CDS |
| CGGCATACACACAGTATACT+TGG | 0.437623 | 1.3:+48906925 | MS.gene23997:CDS |
| ATATCCTCATTAAACCTTGA+AGG | 0.437861 | 1.3:-48906051 | None:intergenic |
| TTTATGAAAGCGTTGAAAAC+CGG | 0.445498 | 1.3:+48905976 | MS.gene23997:CDS |
| CTCTTACGAATGTCGTCCTC+TGG | 0.446305 | 1.3:-48906987 | None:intergenic |
| AATGAGACGGCGCCCTGTGG+CGG | 0.447625 | 1.3:+48905564 | MS.gene23997:CDS |
| ACGAGGTTGGTCCTCATGAA+TGG | 0.447808 | 1.3:+48907276 | MS.gene23997:CDS |
| CCCTGAGAAGGAGGAGAAGA+AGG | 0.450012 | 1.3:+48905936 | MS.gene23997:CDS |
| AAACATCTGCATTATGCTGC+TGG | 0.450155 | 1.3:-48906796 | None:intergenic |
| TGTCTTCTTCCATCCAGGTT+CGG | 0.450428 | 1.3:+48906905 | MS.gene23997:CDS |
| GAGGTTTATCAATTACATCA+TGG | 0.456581 | 1.3:-48905807 | None:intergenic |
| TTACTACCAATGCTGGTCTT+GGG | 0.458270 | 1.3:+48906121 | MS.gene23997:CDS |
| TCTCCTCCTTCTCAGGGACA+GGG | 0.458535 | 1.3:-48905930 | None:intergenic |
| CCTTCTTCTCCTCCTTCTCA+GGG | 0.461076 | 1.3:-48905936 | None:intergenic |
| GGGCGTTCTCCCTGACCAAA+TGG | 0.465316 | 1.3:+48905585 | MS.gene23997:CDS |
| TCAGGGAGAACGCCCGCCAC+AGG | 0.465895 | 1.3:-48905577 | None:intergenic |
| AAAATAAGAGTGATCCTTGT+GGG | 0.471762 | 1.3:+48906001 | MS.gene23997:CDS |
| ATACCTGTCTTCTTCCATCC+AGG | 0.473157 | 1.3:+48906900 | MS.gene23997:CDS |
| AGGTTTATCAATTACATCAT+GGG | 0.478661 | 1.3:-48905806 | None:intergenic |
| GGGTGGAAGTATGTAGGATA+AGG | 0.483181 | 1.3:-48906579 | None:intergenic |
| TGAGGCGATTAGAGAGGAAG+TGG | 0.488880 | 1.3:+48906640 | MS.gene23997:CDS |
| GTCTGCCTTTGATTCCATGT+TGG | 0.489602 | 1.3:+48906869 | MS.gene23997:CDS |
| CGGCGGCCCAAGACCAGCAT+TGG | 0.493353 | 1.3:-48906127 | None:intergenic |
| CAGTTGGAAATATGCTTTGT+TGG | 0.497546 | 1.3:+48907241 | MS.gene23997:CDS |
| GAAATATGCTTTGTTGGATG+AGG | 0.505037 | 1.3:+48907247 | MS.gene23997:CDS |
| TGATTTGGCATTGTCAGGAC+GGG | 0.505393 | 1.3:-48906685 | None:intergenic |
| TACTGTGTGTATGCCGAACC+TGG | 0.505471 | 1.3:-48906918 | None:intergenic |
| CGAGGTTGGTCCTCATGAAT+GGG | 0.505576 | 1.3:+48907277 | MS.gene23997:CDS |
| TGGAATGAAGACAGAATACT+TGG | 0.505827 | 1.3:-48906967 | None:intergenic |
| TGTAAGTTTACTACCAATGC+TGG | 0.507525 | 1.3:+48906114 | MS.gene23997:CDS |
| GTTTAATGAGGATATGTTGA+AGG | 0.509728 | 1.3:+48906059 | MS.gene23997:CDS |
| AAGATGCTGATGTGTTCAAT+TGG | 0.511920 | 1.3:+48906607 | MS.gene23997:CDS |
| CCGGAGTGGAGTATAATGAA+TGG | 0.516300 | 1.3:+48906393 | MS.gene23997:CDS |
| TGTCTGAGGAAGAAACAGAC+TGG | 0.516652 | 1.3:+48906466 | MS.gene23997:CDS |
| TTTGCAGGGTGGAAGTATGT+AGG | 0.517211 | 1.3:-48906585 | None:intergenic |
| GTATGCGACAAATCAGTTTG+CGG | 0.518425 | 1.3:+48906188 | MS.gene23997:CDS |
| TCTTCCTTCAAGGTTTAATG+AGG | 0.519335 | 1.3:+48906047 | MS.gene23997:CDS |
| TGAGCAATGTAGAAGTTCTC+CGG | 0.519680 | 1.3:+48906725 | MS.gene23997:CDS |
| GGGTCAGCATATACTAGTCT+TGG | 0.523979 | 1.3:-48907092 | None:intergenic |
| TGCTGATGTGTTCAATTGGC+AGG | 0.526163 | 1.3:+48906611 | MS.gene23997:CDS |
| ATGAGTATCGAGGAAATACT+TGG | 0.526952 | 1.3:+48907014 | MS.gene23997:CDS |
| ACTTCATTGAGGAGAACAGT+TGG | 0.528023 | 1.3:+48907225 | MS.gene23997:CDS |
| CGGAGTGGAGTATAATGAAT+GGG | 0.528397 | 1.3:+48906394 | MS.gene23997:CDS |
| CAGAGGACGACATTCGTAAG+AGG | 0.529906 | 1.3:+48906988 | MS.gene23997:CDS |
| TAATATCTCGAGGAGGGATG+CGG | 0.531248 | 1.3:+48906335 | MS.gene23997:CDS |
| CGCCGCTTGAGAATGTTGAA+GGG | 0.533893 | 1.3:+48906145 | MS.gene23997:CDS |
| CATTCCAAAAGCTTACCAAC+CGG | 0.535445 | 1.3:-48906744 | None:intergenic |
| GTCTTTAAGAGTTTCTAACT+TGG | 0.540665 | 1.3:-48907120 | None:intergenic |
| ATGGACATATTCTTTGCTGC+CGG | 0.540988 | 1.3:-48906510 | None:intergenic |
| ATATCAAACCCAGCATAAAA+CGG | 0.541005 | 1.3:-48906291 | None:intergenic |
| AAATATGCTTTGTTGGATGA+GGG | 0.541599 | 1.3:+48907248 | MS.gene23997:CDS |
| CAAAGTTACACATTTGAGGA+AGG | 0.543709 | 1.3:+48907175 | MS.gene23997:CDS |
| GTCTGAGGAAGAAACAGACT+GGG | 0.543879 | 1.3:+48906467 | MS.gene23997:CDS |
| CCAAAATCATTTGCATTCCA+CGG | 0.546391 | 1.3:-48906552 | None:intergenic |
| GCCAGCCAACATGGAATCAA+AGG | 0.555175 | 1.3:-48906874 | None:intergenic |
| CTCCTCCTTCTCAGGGACAG+GGG | 0.555383 | 1.3:-48905929 | None:intergenic |
| GATATTGCACGTTATCTTTG+GGG | 0.556924 | 1.3:+48906309 | MS.gene23997:CDS |
| CACCCCTGTCCCTGAGAAGG+AGG | 0.557721 | 1.3:+48905927 | MS.gene23997:CDS |
| TTGATTTGGCATTGTCAGGA+CGG | 0.559182 | 1.3:-48906686 | None:intergenic |
| TTGTTGCGGGGAGGATAACG+TGG | 0.563860 | 1.3:+48906430 | MS.gene23997:CDS |
| AGTGAGAATCATGAGAGAAG+AGG | 0.567837 | 1.3:+48907055 | MS.gene23997:CDS |
| CAGGGAGAACGCCCGCCACA+GGG | 0.568388 | 1.3:-48905576 | None:intergenic |
| TCTTTACCGCAACAGGGTCA+GGG | 0.571861 | 1.3:-48905900 | None:intergenic |
| CAGTTCTGCTTGCAACCTCA+GGG | 0.574443 | 1.3:+48906828 | MS.gene23997:CDS |
| ATGATTCTCACTTGTTCAGG+AGG | 0.576058 | 1.3:-48907044 | None:intergenic |
| AAAGAATATGTCCATGCTTG+TGG | 0.578138 | 1.3:+48906518 | MS.gene23997:CDS |
| GAACCTGGATGGAAGAAGAC+AGG | 0.581328 | 1.3:-48906903 | None:intergenic |
| TGACACCCCTGTCCCTGAGA+AGG | 0.581426 | 1.3:+48905924 | MS.gene23997:CDS |
| AACATCTGCATTATGCTGCT+GGG | 0.583163 | 1.3:-48906795 | None:intergenic |
| TCAATTGGCAGGACAGAATG+AGG | 0.584744 | 1.3:+48906622 | MS.gene23997:CDS |
| AGGTATACAGCCAGCCAACA+TGG | 0.585934 | 1.3:-48906883 | None:intergenic |
| TGACAATGCCAAATCAATCA+GGG | 0.586683 | 1.3:+48906692 | MS.gene23997:CDS |
| GAGTTTCTAACTTGGAGCGA+GGG | 0.588810 | 1.3:-48907112 | None:intergenic |
| ATCATGAGAGAAGAGGTCAT+TGG | 0.590128 | 1.3:+48907062 | MS.gene23997:CDS |
| GTGGAGTATAATGAATGGGA+AGG | 0.593191 | 1.3:+48906398 | MS.gene23997:CDS |
| GGGTTATAATATCTCGAGGA+GGG | 0.593478 | 1.3:+48906329 | MS.gene23997:CDS |
| GGCTTATGAAGAGGCCGGAG+TGG | 0.594655 | 1.3:+48906379 | MS.gene23997:CDS |
| GCCGCTTGAGAATGTTGAAG+GGG | 0.594748 | 1.3:+48906146 | MS.gene23997:CDS |
| AGAGTTTCTAACTTGGAGCG+AGG | 0.604913 | 1.3:-48907113 | None:intergenic |
| GTGTGTATGCCGAACCTGGA+TGG | 0.606530 | 1.3:-48906914 | None:intergenic |
| CCTTCAACATTCTCAAGCGG+CGG | 0.606943 | 1.3:-48906144 | None:intergenic |
| GGTTGCGATGATTTAACTCG+AGG | 0.608916 | 1.3:-48905826 | None:intergenic |
| ACTCGACTCTACCACAAGCA+TGG | 0.610855 | 1.3:-48906529 | None:intergenic |
| TGACTGGCTTATGAAGAGGC+CGG | 0.613272 | 1.3:+48906374 | MS.gene23997:CDS |
| CAATGTAGAAGTTCTCCGGT+TGG | 0.619092 | 1.3:+48906729 | MS.gene23997:CDS |
| CTTTACCGCAACAGGGTCAG+GGG | 0.619249 | 1.3:-48905899 | None:intergenic |
| GTGATCATCAACAAATTGAG+TGG | 0.619603 | 1.3:-48905734 | None:intergenic |
| GATTTGGCATTGTCAGGACG+GGG | 0.620412 | 1.3:-48906684 | None:intergenic |
| TGACACCCCTGACCCTGTTG+CGG | 0.622233 | 1.3:+48905894 | MS.gene23997:CDS |
| TGGTTGACTGGCTTATGAAG+AGG | 0.623329 | 1.3:+48906370 | MS.gene23997:CDS |
| GATGAGGGAAAACACGAGGT+TGG | 0.623860 | 1.3:+48907263 | MS.gene23997:CDS |
| CCATTCATTATACTCCACTC+CGG | 0.623909 | 1.3:-48906393 | None:intergenic |
| AATCATCGCAACCGCCTCCG+AGG | 0.627422 | 1.3:+48905836 | MS.gene23997:CDS |
| ACCCCTTCAACATTCTCAAG+CGG | 0.628618 | 1.3:-48906147 | None:intergenic |
| GTATTCTGTCTTCATTCCAG+AGG | 0.633027 | 1.3:+48906971 | MS.gene23997:CDS |
| ACAGAATGAGGCGATTAGAG+AGG | 0.639158 | 1.3:+48906634 | MS.gene23997:CDS |
| TTTGGGGTTATAATATCTCG+AGG | 0.641133 | 1.3:+48906325 | MS.gene23997:CDS |
| TTGATTGAATGCAAATGAGA+CGG | 0.643214 | 1.3:+48905551 | None:intergenic |
| TGTTGCGGGGAGGATAACGT+GGG | 0.647158 | 1.3:+48906431 | MS.gene23997:CDS |
| AAGAAAGGATCCCATTCATG+AGG | 0.647321 | 1.3:-48907287 | None:intergenic |
| AATAAGAGTGATCCTTGTGG+GGG | 0.649379 | 1.3:+48906003 | MS.gene23997:CDS |
| GGGGTTATAATATCTCGAGG+AGG | 0.650227 | 1.3:+48906328 | MS.gene23997:CDS |
| GAAAATAAGAGTGATCCTTG+TGG | 0.653504 | 1.3:+48906000 | MS.gene23997:CDS |
| AAATAAGAGTGATCCTTGTG+GGG | 0.657313 | 1.3:+48906002 | MS.gene23997:CDS |
| GCAAATGAGACGGCGCCCTG+TGG | 0.665026 | 1.3:+48905561 | MS.gene23997:CDS |
| GACAATGCCAAATCAATCAG+GGG | 0.665818 | 1.3:+48906693 | MS.gene23997:CDS |
| TAAGAGGAACATGAGTATCG+AGG | 0.675462 | 1.3:+48907004 | MS.gene23997:CDS |
| AGGGTGATTCATACACTCGA+AGG | 0.675831 | 1.3:+48906847 | MS.gene23997:CDS |
| TGAGAAGGAGGAGAAGAAGG+AGG | 0.678894 | 1.3:+48905939 | MS.gene23997:CDS |
| AGCTTCAGCAGATGAATCAG+TGG | 0.683333 | 1.3:-48907342 | None:intergenic |
| GTTGGATGAGGGAAAACACG+AGG | 0.683608 | 1.3:+48907259 | MS.gene23997:CDS |
| TGTCACTCTTTACCGCAACA+GGG | 0.687983 | 1.3:-48905906 | None:intergenic |
| TTGTGGTAGAGTCGAGTCCG+TGG | 0.690146 | 1.3:+48906535 | MS.gene23997:CDS |
| TGTCATTCTTTATCACAACA+GGG | 0.695657 | 1.3:-48905876 | None:intergenic |
| CTGAGGAAGAAACAGACTGG+GGG | 0.706384 | 1.3:+48906469 | MS.gene23997:CDS |
| ATAAGAGTGATCCTTGTGGG+GGG | 0.715435 | 1.3:+48906004 | MS.gene23997:CDS |
| TCTGAGGAAGAAACAGACTG+GGG | 0.732806 | 1.3:+48906468 | MS.gene23997:CDS |
| GCAGTATGAGTGCTTGACTG+AGG | 0.734277 | 1.3:+48906239 | MS.gene23997:CDS |
| CGAGTGTATGAATCACCCTG+AGG | 0.742346 | 1.3:-48906843 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGATAAAAACTTCATTG+AGG | + | chr1.3:48907214-48907233 | MS.gene23997:CDS | 20.0% |
| !! | TTGATGTTATATTTAGCAAT+AGG | + | chr1.3:48906211-48906230 | MS.gene23997:CDS | 20.0% |
| ! | AGGTTTATCAATTACATCAT+GGG | - | chr1.3:48905809-48905828 | None:intergenic | 25.0% |
| ! | GAATACTTGGTATAATTCTT+AGG | - | chr1.3:48906957-48906976 | None:intergenic | 25.0% |
| ! | TTCTCAAAACCAAAAAATGA+TGG | + | chr1.3:48907308-48907327 | MS.gene23997:CDS | 25.0% |
| !!! | TTTTTTGGTTTTGAGAAGAA+AGG | - | chr1.3:48907305-48907324 | None:intergenic | 25.0% |
| AAAATAAGAGTGATCCTTGT+GGG | + | chr1.3:48906001-48906020 | MS.gene23997:CDS | 30.0% | |
| AAACCAAAAAATGATGGTAG+TGG | + | chr1.3:48907314-48907333 | MS.gene23997:CDS | 30.0% | |
| AGTGTAAAAGTTTGAGTCTT+TGG | + | chr1.3:48906082-48906101 | MS.gene23997:CDS | 30.0% | |
| ATATCAAACCCAGCATAAAA+CGG | - | chr1.3:48906294-48906313 | None:intergenic | 30.0% | |
| ATATCCTCATTAAACCTTGA+AGG | - | chr1.3:48906054-48906073 | None:intergenic | 30.0% | |
| GAGGTTTATCAATTACATCA+TGG | - | chr1.3:48905810-48905829 | None:intergenic | 30.0% | |
| GTTTAATGAGGATATGTTGA+AGG | + | chr1.3:48906059-48906078 | MS.gene23997:CDS | 30.0% | |
| TAGTAGTATTATCAGCTCTA+AGG | - | chr1.3:48905708-48905727 | None:intergenic | 30.0% | |
| TCATCAAAATGAACAGAAAC+AGG | - | chr1.3:48905775-48905794 | None:intergenic | 30.0% | |
| TGATATTGCACGTTATCTTT+GGG | + | chr1.3:48906308-48906327 | MS.gene23997:CDS | 30.0% | |
| TGTCATTCTTTATCACAACA+GGG | - | chr1.3:48905879-48905898 | None:intergenic | 30.0% | |
| TTGACAAAGTTACACATTTG+AGG | + | chr1.3:48907171-48907190 | MS.gene23997:CDS | 30.0% | |
| TTGATATTGCACGTTATCTT+TGG | + | chr1.3:48906307-48906326 | MS.gene23997:CDS | 30.0% | |
| ! | AAATATGCTTTGTTGGATGA+GGG | + | chr1.3:48907248-48907267 | MS.gene23997:CDS | 30.0% |
| ! | ATTTTTGTTCCGTTTTATGC+TGG | + | chr1.3:48906282-48906301 | MS.gene23997:CDS | 30.0% |
| ! | CTTCTTTATCAGCTTTTCTA+TGG | + | chr1.3:48905653-48905672 | MS.gene23997:CDS | 30.0% |
| ! | GTCTTTAAGAGTTTCTAACT+TGG | - | chr1.3:48907123-48907142 | None:intergenic | 30.0% |
| ! | GTTTTCAACGCTTTCATAAA+AGG | - | chr1.3:48905976-48905995 | None:intergenic | 30.0% |
| ! | TTTTTGTTCCGTTTTATGCT+GGG | + | chr1.3:48906283-48906302 | MS.gene23997:CDS | 30.0% |
| !! | TTTATGAAAGCGTTGAAAAC+CGG | + | chr1.3:48905976-48905995 | MS.gene23997:CDS | 30.0% |
| !!! | GAATAAGCTTCTGTTTTTAC+CGG | + | chr1.3:48906491-48906510 | MS.gene23997:CDS | 30.0% |
| AAAGAATATGTCCATGCTTG+TGG | + | chr1.3:48906518-48906537 | MS.gene23997:CDS | 35.0% | |
| AAATAAGAGTGATCCTTGTG+GGG | + | chr1.3:48906002-48906021 | MS.gene23997:CDS | 35.0% | |
| AAGATGCTGATGTGTTCAAT+TGG | + | chr1.3:48906607-48906626 | MS.gene23997:CDS | 35.0% | |
| CAAAGTTACACATTTGAGGA+AGG | + | chr1.3:48907175-48907194 | MS.gene23997:CDS | 35.0% | |
| CAGTTGGAAATATGCTTTGT+TGG | + | chr1.3:48907241-48907260 | MS.gene23997:CDS | 35.0% | |
| CCAAAATCATTTGCATTCCA+CGG | - | chr1.3:48906555-48906574 | None:intergenic | 35.0% | |
| CTGAAGCTGCAAAAAATTCT+TGG | + | chr1.3:48907357-48907376 | MS.gene23997:CDS | 35.0% | |
| GAAAATAAGAGTGATCCTTG+TGG | + | chr1.3:48906000-48906019 | MS.gene23997:CDS | 35.0% | |
| GATATTGCACGTTATCTTTG+GGG | + | chr1.3:48906309-48906328 | MS.gene23997:CDS | 35.0% | |
| GTGATCATCAACAAATTGAG+TGG | - | chr1.3:48905737-48905756 | None:intergenic | 35.0% | |
| TCTTCCTTCAAGGTTTAATG+AGG | + | chr1.3:48906047-48906066 | MS.gene23997:CDS | 35.0% | |
| TGACAATGCCAAATCAATCA+GGG | + | chr1.3:48906692-48906711 | MS.gene23997:CDS | 35.0% | |
| TGGAATGAAGACAGAATACT+TGG | - | chr1.3:48906970-48906989 | None:intergenic | 35.0% | |
| TGTAAGTTTACTACCAATGC+TGG | + | chr1.3:48906114-48906133 | MS.gene23997:CDS | 35.0% | |
| ! | AAGGATCATTTTCTTGTTGC+GGG | + | chr1.3:48906417-48906436 | MS.gene23997:CDS | 35.0% |
| ! | GAAATATGCTTTGTTGGATG+AGG | + | chr1.3:48907247-48907266 | MS.gene23997:CDS | 35.0% |
| ! | GAAGGATCATTTTCTTGTTG+CGG | + | chr1.3:48906416-48906435 | MS.gene23997:CDS | 35.0% |
| ! | GTGTCATTCTTTATCACAAC+AGG | - | chr1.3:48905880-48905899 | None:intergenic | 35.0% |
| ! | TTTGGGGTTATAATATCTCG+AGG | + | chr1.3:48906325-48906344 | MS.gene23997:CDS | 35.0% |
| !! | AACAGAAACAGGTGTTGATT+TGG | - | chr1.3:48905764-48905783 | None:intergenic | 35.0% |
| !! | ATGAGTATCGAGGAAATACT+TGG | + | chr1.3:48907014-48907033 | MS.gene23997:CDS | 35.0% |
| !!! | AAGCTTTTGGAATGTGACTT+TGG | + | chr1.3:48906753-48906772 | MS.gene23997:CDS | 35.0% |
| !!! | AGGATCACTCTTATTTTCAC+CGG | - | chr1.3:48905998-48906017 | None:intergenic | 35.0% |
| !!! | TCTCCACTACCATCATTTTT+TGG | - | chr1.3:48907320-48907339 | None:intergenic | 35.0% |
| AAACATCTGCATTATGCTGC+TGG | - | chr1.3:48906799-48906818 | None:intergenic | 40.0% | |
| AACATCTGCATTATGCTGCT+GGG | - | chr1.3:48906798-48906817 | None:intergenic | 40.0% | |
| AAGAAAGGATCCCATTCATG+AGG | - | chr1.3:48907290-48907309 | None:intergenic | 40.0% | |
| AATAAGAGTGATCCTTGTGG+GGG | + | chr1.3:48906003-48906022 | MS.gene23997:CDS | 40.0% | |
| ACTTCATTGAGGAGAACAGT+TGG | + | chr1.3:48907225-48907244 | MS.gene23997:CDS | 40.0% | |
| AGTGAGAATCATGAGAGAAG+AGG | + | chr1.3:48907055-48907074 | MS.gene23997:CDS | 40.0% | |
| ATCATGAGAGAAGAGGTCAT+TGG | + | chr1.3:48907062-48907081 | MS.gene23997:CDS | 40.0% | |
| ATGATTCTCACTTGTTCAGG+AGG | - | chr1.3:48907047-48907066 | None:intergenic | 40.0% | |
| ATGGACATATTCTTTGCTGC+CGG | - | chr1.3:48906513-48906532 | None:intergenic | 40.0% | |
| ATGTGCATGATCTTCCTTCA+AGG | + | chr1.3:48906037-48906056 | MS.gene23997:CDS | 40.0% | |
| CATTCCAAAAGCTTACCAAC+CGG | - | chr1.3:48906747-48906766 | None:intergenic | 40.0% | |
| CCATTCATTATACTCCACTC+CGG | - | chr1.3:48906396-48906415 | None:intergenic | 40.0% | |
| CGGAGTGGAGTATAATGAAT+GGG | + | chr1.3:48906394-48906413 | MS.gene23997:CDS | 40.0% | |
| CTCATGATTCTCACTTGTTC+AGG | - | chr1.3:48907050-48907069 | None:intergenic | 40.0% | |
| CTGACAATGCCAAATCAATC+AGG | + | chr1.3:48906691-48906710 | MS.gene23997:CDS | 40.0% | |
| GACAATGCCAAATCAATCAG+GGG | + | chr1.3:48906693-48906712 | MS.gene23997:CDS | 40.0% | |
| GGGTTATAATATCTCGAGGA+GGG | + | chr1.3:48906329-48906348 | MS.gene23997:CDS | 40.0% | |
| GTATGCGACAAATCAGTTTG+CGG | + | chr1.3:48906188-48906207 | MS.gene23997:CDS | 40.0% | |
| GTATTCTGTCTTCATTCCAG+AGG | + | chr1.3:48906971-48906990 | MS.gene23997:CDS | 40.0% | |
| GTGGAGTATAATGAATGGGA+AGG | + | chr1.3:48906398-48906417 | MS.gene23997:CDS | 40.0% | |
| TAACTGACCCCTGATTGATT+TGG | - | chr1.3:48906703-48906722 | None:intergenic | 40.0% | |
| TCCCTGACCAAATGGAAAAA+GGG | + | chr1.3:48905593-48905612 | MS.gene23997:CDS | 40.0% | |
| TGAGCAATGTAGAAGTTCTC+CGG | + | chr1.3:48906725-48906744 | MS.gene23997:CDS | 40.0% | |
| TTCTTTATCACAACAGGGTC+AGG | - | chr1.3:48905874-48905893 | None:intergenic | 40.0% | |
| ! | AACACATCAGCATCTTTTGC+AGG | - | chr1.3:48906603-48906622 | None:intergenic | 40.0% |
| ! | AAGTGGCTTTTCTCATTTGC+TGG | + | chr1.3:48906657-48906676 | MS.gene23997:CDS | 40.0% |
| ! | ACACATCAGCATCTTTTGCA+GGG | - | chr1.3:48906602-48906621 | None:intergenic | 40.0% |
| ! | AGGATCATTTTCTTGTTGCG+GGG | + | chr1.3:48906418-48906437 | MS.gene23997:CDS | 40.0% |
| ! | CCGTGGAATGCAAATGATTT+TGG | + | chr1.3:48906552-48906571 | MS.gene23997:CDS | 40.0% |
| ! | GAATGTTGAAGGGGTTTTCT+CGG | + | chr1.3:48906155-48906174 | MS.gene23997:CDS | 40.0% |
| ! | TAAGAGGAACATGAGTATCG+AGG | + | chr1.3:48907004-48907023 | MS.gene23997:CDS | 40.0% |
| ! | TCAGGAAACCCAATTTTCCT+CGG | - | chr1.3:48905856-48905875 | None:intergenic | 40.0% |
| ! | TTGATCCCCCTTTTTCCATT+TGG | - | chr1.3:48905603-48905622 | None:intergenic | 40.0% |
| ! | TTTACTACCAATGCTGGTCT+TGG | + | chr1.3:48906120-48906139 | MS.gene23997:CDS | 40.0% |
| !! | CTGATTGATTTGGCATTGTC+AGG | - | chr1.3:48906693-48906712 | None:intergenic | 40.0% |
| !! | TTACTACCAATGCTGGTCTT+GGG | + | chr1.3:48906121-48906140 | MS.gene23997:CDS | 40.0% |
| !! | TTGATTTGGCATTGTCAGGA+CGG | - | chr1.3:48906689-48906708 | None:intergenic | 40.0% |
| ACAGAATGAGGCGATTAGAG+AGG | + | chr1.3:48906634-48906653 | MS.gene23997:CDS | 45.0% | |
| ACCCCTTCAACATTCTCAAG+CGG | - | chr1.3:48906150-48906169 | None:intergenic | 45.0% | |
| AGAGTTTCTAACTTGGAGCG+AGG | - | chr1.3:48907116-48907135 | None:intergenic | 45.0% | |
| AGCTTCAGCAGATGAATCAG+TGG | - | chr1.3:48907345-48907364 | None:intergenic | 45.0% | |
| AGGGTGATTCATACACTCGA+AGG | + | chr1.3:48906847-48906866 | MS.gene23997:CDS | 45.0% | |
| ATAAGAGTGATCCTTGTGGG+GGG | + | chr1.3:48906004-48906023 | MS.gene23997:CDS | 45.0% | |
| ATACCTGTCTTCTTCCATCC+AGG | + | chr1.3:48906900-48906919 | MS.gene23997:CDS | 45.0% | |
| CAATGTAGAAGTTCTCCGGT+TGG | + | chr1.3:48906729-48906748 | MS.gene23997:CDS | 45.0% | |
| CCCTGACCAAATGGAAAAAG+GGG | + | chr1.3:48905594-48905613 | MS.gene23997:CDS | 45.0% | |
| CCGGAGTGGAGTATAATGAA+TGG | + | chr1.3:48906393-48906412 | MS.gene23997:CDS | 45.0% | |
| CCTGACCAAATGGAAAAAGG+GGG | + | chr1.3:48905595-48905614 | MS.gene23997:CDS | 45.0% | |
| CGGCATACACACAGTATACT+TGG | + | chr1.3:48906925-48906944 | MS.gene23997:CDS | 45.0% | |
| CTCCCTGACCAAATGGAAAA+AGG | + | chr1.3:48905592-48905611 | MS.gene23997:CDS | 45.0% | |
| GAGTTTCTAACTTGGAGCGA+GGG | - | chr1.3:48907115-48907134 | None:intergenic | 45.0% | |
| GGGGTTATAATATCTCGAGG+AGG | + | chr1.3:48906328-48906347 | MS.gene23997:CDS | 45.0% | |
| GGTTGCGATGATTTAACTCG+AGG | - | chr1.3:48905829-48905848 | None:intergenic | 45.0% | |
| GTCTGAGGAAGAAACAGACT+GGG | + | chr1.3:48906467-48906486 | MS.gene23997:CDS | 45.0% | |
| GTCTGCCTTTGATTCCATGT+TGG | + | chr1.3:48906869-48906888 | MS.gene23997:CDS | 45.0% | |
| TAAATATACCTCCCCCCACA+AGG | - | chr1.3:48906018-48906037 | None:intergenic | 45.0% | |
| TAATATCTCGAGGAGGGATG+CGG | + | chr1.3:48906335-48906354 | MS.gene23997:CDS | 45.0% | |
| TCAATTGGCAGGACAGAATG+AGG | + | chr1.3:48906622-48906641 | MS.gene23997:CDS | 45.0% | |
| TCTGAGGAAGAAACAGACTG+GGG | + | chr1.3:48906468-48906487 | MS.gene23997:CDS | 45.0% | |
| TGCTGATGTGTTCAATTGGC+AGG | + | chr1.3:48906611-48906630 | MS.gene23997:CDS | 45.0% | |
| TGTCACTCTTTACCGCAACA+GGG | - | chr1.3:48905909-48905928 | None:intergenic | 45.0% | |
| TGTCTGAGGAAGAAACAGAC+TGG | + | chr1.3:48906466-48906485 | MS.gene23997:CDS | 45.0% | |
| TGTCTTCTTCCATCCAGGTT+CGG | + | chr1.3:48906905-48906924 | MS.gene23997:CDS | 45.0% | |
| ! | ATCATTTTCTTGTTGCGGGG+AGG | + | chr1.3:48906421-48906440 | MS.gene23997:CDS | 45.0% |
| ! | CCCCTTTTTCCATTTGGTCA+GGG | - | chr1.3:48905597-48905616 | None:intergenic | 45.0% |
| ! | GGAGGATAACGTGGGATTTT+CGG | + | chr1.3:48906439-48906458 | MS.gene23997:CDS | 45.0% |
| ! | GGATTTTCGGAGATTGTCTG+AGG | + | chr1.3:48906452-48906471 | MS.gene23997:CDS | 45.0% |
| ! | GGGTCAGCATATACTAGTCT+TGG | - | chr1.3:48907095-48907114 | None:intergenic | 45.0% |
| ! | GGGTGGAAGTATGTAGGATA+AGG | - | chr1.3:48906582-48906601 | None:intergenic | 45.0% |
| ! | TGAAGGGGTTTTCTCGGATA+CGG | + | chr1.3:48906161-48906180 | MS.gene23997:CDS | 45.0% |
| ! | TGATTTGGCATTGTCAGGAC+GGG | - | chr1.3:48906688-48906707 | None:intergenic | 45.0% |
| ! | TTTGCAGGGTGGAAGTATGT+AGG | - | chr1.3:48906588-48906607 | None:intergenic | 45.0% |
| !! | TGGTTGACTGGCTTATGAAG+AGG | + | chr1.3:48906370-48906389 | MS.gene23997:CDS | 45.0% |
| !!! | TTCTCCGGTTGGTAAGCTTT+TGG | + | chr1.3:48906740-48906759 | MS.gene23997:CDS | 45.0% |
| AACCGCCTCCGAGGAAAATT+GGG | + | chr1.3:48905845-48905864 | MS.gene23997:CDS | 50.0% | |
| ACAGTTCTGCTTGCAACCTC+AGG | + | chr1.3:48906827-48906846 | MS.gene23997:CDS | 50.0% | |
| ACTCGACTCTACCACAAGCA+TGG | - | chr1.3:48906532-48906551 | None:intergenic | 50.0% | |
| AGGTATACAGCCAGCCAACA+TGG | - | chr1.3:48906886-48906905 | None:intergenic | 50.0% | |
| CAGAGGACGACATTCGTAAG+AGG | + | chr1.3:48906988-48907007 | MS.gene23997:CDS | 50.0% | |
| CAGTTCTGCTTGCAACCTCA+GGG | + | chr1.3:48906828-48906847 | MS.gene23997:CDS | 50.0% | |
| CCTTCAACATTCTCAAGCGG+CGG | - | chr1.3:48906147-48906166 | None:intergenic | 50.0% | |
| CCTTCTTCTCCTCCTTCTCA+GGG | - | chr1.3:48905939-48905958 | None:intergenic | 50.0% | |
| CGAGTGTATGAATCACCCTG+AGG | - | chr1.3:48906846-48906865 | None:intergenic | 50.0% | |
| CGCCGCTTGAGAATGTTGAA+GGG | + | chr1.3:48906145-48906164 | MS.gene23997:CDS | 50.0% | |
| CTCTTACGAATGTCGTCCTC+TGG | - | chr1.3:48906990-48907009 | None:intergenic | 50.0% | |
| CTGAGGAAGAAACAGACTGG+GGG | + | chr1.3:48906469-48906488 | MS.gene23997:CDS | 50.0% | |
| CTTCGCTTGATCTGGTTGAC+TGG | + | chr1.3:48906358-48906377 | MS.gene23997:CDS | 50.0% | |
| GAACCTGGATGGAAGAAGAC+AGG | - | chr1.3:48906906-48906925 | None:intergenic | 50.0% | |
| GATGAGGGAAAACACGAGGT+TGG | + | chr1.3:48907263-48907282 | MS.gene23997:CDS | 50.0% | |
| GATTTGGCATTGTCAGGACG+GGG | - | chr1.3:48906687-48906706 | None:intergenic | 50.0% | |
| GCAGTATGAGTGCTTGACTG+AGG | + | chr1.3:48906239-48906258 | MS.gene23997:CDS | 50.0% | |
| GCCAGCCAACATGGAATCAA+AGG | - | chr1.3:48906877-48906896 | None:intergenic | 50.0% | |
| GCCGCTTGAGAATGTTGAAG+GGG | + | chr1.3:48906146-48906165 | MS.gene23997:CDS | 50.0% | |
| GCCTTTGATTCCATGTTGGC+TGG | + | chr1.3:48906873-48906892 | MS.gene23997:CDS | 50.0% | |
| GTTGGATGAGGGAAAACACG+AGG | + | chr1.3:48907259-48907278 | MS.gene23997:CDS | 50.0% | |
| TACTGTGTGTATGCCGAACC+TGG | - | chr1.3:48906921-48906940 | None:intergenic | 50.0% | |
| TCCTTCTTCTCCTCCTTCTC+AGG | - | chr1.3:48905940-48905959 | None:intergenic | 50.0% | |
| TCTTTACCGCAACAGGGTCA+GGG | - | chr1.3:48905903-48905922 | None:intergenic | 50.0% | |
| TGAGAAGGAGGAGAAGAAGG+AGG | + | chr1.3:48905939-48905958 | MS.gene23997:CDS | 50.0% | |
| TGAGGCGATTAGAGAGGAAG+TGG | + | chr1.3:48906640-48906659 | MS.gene23997:CDS | 50.0% | |
| ! | AACCCAATTTTCCTCGGAGG+CGG | - | chr1.3:48905850-48905869 | None:intergenic | 50.0% |
| ! | ACGAGGTTGGTCCTCATGAA+TGG | + | chr1.3:48907276-48907295 | MS.gene23997:CDS | 50.0% |
| ! | CATCAGCATCTTTTGCAGGG+TGG | - | chr1.3:48906599-48906618 | None:intergenic | 50.0% |
| ! | CCCCCTTTTTCCATTTGGTC+AGG | - | chr1.3:48905598-48905617 | None:intergenic | 50.0% |
| ! | CGAGGTTGGTCCTCATGAAT+GGG | + | chr1.3:48907277-48907296 | MS.gene23997:CDS | 50.0% |
| ! | GAAGGGGTTTTCTCGGATAC+GGG | + | chr1.3:48906162-48906181 | MS.gene23997:CDS | 50.0% |
| ! | GGAAACCCAATTTTCCTCGG+AGG | - | chr1.3:48905853-48905872 | None:intergenic | 50.0% |
| ! | GTGTCACTCTTTACCGCAAC+AGG | - | chr1.3:48905910-48905929 | None:intergenic | 50.0% |
| !! | TGACTGGCTTATGAAGAGGC+CGG | + | chr1.3:48906374-48906393 | MS.gene23997:CDS | 50.0% |
| CAACCGCCTCCGAGGAAAAT+TGG | + | chr1.3:48905844-48905863 | MS.gene23997:CDS | 55.0% | |
| CCCTGAGAAGGAGGAGAAGA+AGG | + | chr1.3:48905936-48905955 | MS.gene23997:CDS | 55.0% | |
| CCGCCGCTTGAGAATGTTGA+AGG | + | chr1.3:48906144-48906163 | MS.gene23997:CDS | 55.0% | |
| CTCTTTACCGCAACAGGGTC+AGG | - | chr1.3:48905904-48905923 | None:intergenic | 55.0% | |
| CTTTACCGCAACAGGGTCAG+GGG | - | chr1.3:48905902-48905921 | None:intergenic | 55.0% | |
| GTGTGTATGCCGAACCTGGA+TGG | - | chr1.3:48906917-48906936 | None:intergenic | 55.0% | |
| TCTCCTCCTTCTCAGGGACA+GGG | - | chr1.3:48905933-48905952 | None:intergenic | 55.0% | |
| TGTTGCGGGGAGGATAACGT+GGG | + | chr1.3:48906431-48906450 | MS.gene23997:CDS | 55.0% | |
| TTCTCCTCCTTCTCAGGGAC+AGG | - | chr1.3:48905934-48905953 | None:intergenic | 55.0% | |
| TTGTGGTAGAGTCGAGTCCG+TGG | + | chr1.3:48906535-48906554 | MS.gene23997:CDS | 55.0% | |
| TTGTTGCGGGGAGGATAACG+TGG | + | chr1.3:48906430-48906449 | MS.gene23997:CDS | 55.0% | |
| ! | GGGTTTTCTCGGATACGGGT+TGG | + | chr1.3:48906166-48906185 | MS.gene23997:CDS | 55.0% |
| AATCATCGCAACCGCCTCCG+AGG | + | chr1.3:48905836-48905855 | MS.gene23997:CDS | 60.0% | |
| AGAGTGATCCTTGTGGGGGG+AGG | + | chr1.3:48906007-48906026 | MS.gene23997:CDS | 60.0% | |
| CTCCTCCTTCTCAGGGACAG+GGG | - | chr1.3:48905932-48905951 | None:intergenic | 60.0% | |
| GGATGCGGCTTCGCTTGATC+TGG | + | chr1.3:48906350-48906369 | MS.gene23997:CDS | 60.0% | |
| GGCTTATGAAGAGGCCGGAG+TGG | + | chr1.3:48906379-48906398 | MS.gene23997:CDS | 60.0% | |
| GGGCGTTCTCCCTGACCAAA+TGG | + | chr1.3:48905585-48905604 | MS.gene23997:CDS | 60.0% | |
| TGACACCCCTGACCCTGTTG+CGG | + | chr1.3:48905894-48905913 | MS.gene23997:CDS | 60.0% | |
| TGACACCCCTGTCCCTGAGA+AGG | + | chr1.3:48905924-48905943 | MS.gene23997:CDS | 60.0% | |
| AATGAGACGGCGCCCTGTGG+CGG | + | chr1.3:48905564-48905583 | MS.gene23997:CDS | 65.0% | |
| CACCCCTGTCCCTGAGAAGG+AGG | + | chr1.3:48905927-48905946 | MS.gene23997:CDS | 65.0% | |
| GCAAATGAGACGGCGCCCTG+TGG | + | chr1.3:48905561-48905580 | MS.gene23997:CDS | 65.0% | |
| ATGAGACGGCGCCCTGTGGC+GGG | + | chr1.3:48905565-48905584 | MS.gene23997:CDS | 70.0% | |
| CAGGGAGAACGCCCGCCACA+GGG | - | chr1.3:48905579-48905598 | None:intergenic | 70.0% | |
| CGGCGGCCCAAGACCAGCAT+TGG | - | chr1.3:48906130-48906149 | None:intergenic | 70.0% | |
| TCAGGGAGAACGCCCGCCAC+AGG | - | chr1.3:48905580-48905599 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 48905559 | 48907406 | 48905559 | ID=MS.gene23997 |
| chr1.3 | mRNA | 48905559 | 48907406 | 48905559 | ID=MS.gene23997.t1;Parent=MS.gene23997 |
| chr1.3 | exon | 48905559 | 48907406 | 48905559 | ID=MS.gene23997.t1.exon1;Parent=MS.gene23997.t1 |
| chr1.3 | CDS | 48905559 | 48907406 | 48905559 | ID=cds.MS.gene23997.t1;Parent=MS.gene23997.t1 |
| Gene Sequence |
| Protein sequence |
