AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24290.t1 MTR_1g022160 98.956 479 5 0 1 479 1 479 0.0 973
MS.gene24290.t1 MTR_1g022160 98.517 472 7 0 1 472 1 472 0.0 951
MS.gene24290.t1 MTR_1g022160 98.929 467 5 0 1 467 1 467 0.0 948
MS.gene24290.t1 MTR_1g022160 92.969 384 21 2 1 384 1 378 0.0 679
MS.gene24290.t1 MTR_3g116510 63.579 475 145 5 8 478 8 458 0.0 612
MS.gene24290.t1 MTR_4g069940 63.539 469 149 5 10 477 15 462 0.0 605
MS.gene24290.t1 MTR_3g116510 61.494 348 110 4 131 478 1 324 2.47e-154 442
MS.gene24290.t1 MTR_7g026340 40.798 451 238 8 24 472 23 446 3.82e-124 369
MS.gene24290.t1 MTR_4g083500 42.484 459 239 10 24 474 44 485 1.06e-118 358
MS.gene24290.t1 MTR_6g088885 37.161 479 269 7 4 478 10 460 5.30e-111 338
MS.gene24290.t1 MTR_1g056640 37.849 465 269 8 24 477 38 493 1.20e-106 326
MS.gene24290.t1 MTR_1g007810 48.125 320 158 4 24 341 16 329 1.73e-101 308
MS.gene24290.t1 MTR_5g085580 36.304 460 272 7 24 477 25 469 8.18e-101 310
MS.gene24290.t1 MTR_1g077990 46.584 322 169 3 24 345 31 349 9.16e-100 305
MS.gene24290.t1 MTR_4g084480 43.875 351 194 3 24 373 32 380 1.40e-96 297
MS.gene24290.t1 MTR_4g052970 43.491 338 189 2 24 361 29 364 2.71e-96 296
MS.gene24290.t1 MTR_3g065460 35.625 480 269 6 4 476 1 447 3.04e-96 299
MS.gene24290.t1 MTR_4g084480 45.652 322 173 2 24 345 32 351 1.35e-95 295
MS.gene24290.t1 MTR_4g084480 45.652 322 173 2 24 345 25 344 1.63e-95 294
MS.gene24290.t1 MTR_2g086530 42.775 346 183 5 9 347 11 348 1.39e-94 291
MS.gene24290.t1 MTR_8g012400 36.383 481 268 12 4 474 6 458 2.92e-94 293
MS.gene24290.t1 MTR_2g086530 43.519 324 179 3 24 347 8 327 7.61e-94 289
MS.gene24290.t1 MTR_4g088155 33.755 474 284 9 8 474 7 457 1.43e-93 291
MS.gene24290.t1 MTR_5g078200 36.326 479 266 6 4 476 1 446 9.76e-93 295
MS.gene24290.t1 MTR_4g010200 42.249 329 189 1 25 353 34 361 2.39e-92 286
MS.gene24290.t1 MTR_8g102340 34.868 456 235 7 20 474 24 418 1.68e-91 286
MS.gene24290.t1 MTR_3g083580 34.656 479 277 7 1 476 3 448 1.74e-91 287
MS.gene24290.t1 MTR_7g053500 35.449 457 263 9 25 474 27 458 4.96e-91 285
MS.gene24290.t1 MTR_2g019345 43.491 338 185 5 9 344 8 341 1.20e-88 276
MS.gene24290.t1 MTR_1g031900 34.029 479 278 5 4 476 1 447 1.39e-87 277
MS.gene24290.t1 MTR_1g031900 34.029 479 278 5 4 476 1 447 2.26e-87 276
MS.gene24290.t1 MTR_4g132280 34.498 458 265 5 22 476 43 468 3.22e-86 274
MS.gene24290.t1 MTR_8g085720 33.542 480 283 5 1 476 3 450 1.61e-85 271
MS.gene24290.t1 MTR_5g078200 36.099 446 248 5 35 476 1 413 2.16e-85 275
MS.gene24290.t1 MTR_3g080410 41.593 339 189 5 24 356 26 361 7.15e-83 260
MS.gene24290.t1 MTR_4g114850 39.062 320 194 1 25 344 27 345 4.88e-81 256
MS.gene24290.t1 MTR_4g114850 39.062 320 194 1 25 344 27 345 7.47e-81 256
MS.gene24290.t1 MTR_4g114850 39.062 320 194 1 25 344 27 345 1.04e-80 256
MS.gene24290.t1 MTR_8g012400 36.658 401 223 9 79 474 4 378 8.05e-78 248
MS.gene24290.t1 MTR_7g053500 35.732 403 227 9 79 474 4 381 2.45e-77 247
MS.gene24290.t1 MTR_4g076500 41.613 310 171 5 24 333 78 377 1.41e-71 232
MS.gene24290.t1 MTR_7g081350 38.529 340 196 8 3 340 5 333 3.05e-66 216
MS.gene24290.t1 MTR_4g076470 37.092 337 194 9 4 340 6 324 6.98e-64 210
MS.gene24290.t1 MTR_1g052430 38.245 319 187 6 24 341 32 341 1.98e-63 211
MS.gene24290.t1 MTR_4g076490 36.957 322 189 7 24 345 97 404 6.72e-62 207
MS.gene24290.t1 MTR_4g076440 35.799 338 199 8 4 341 6 325 4.11e-61 203
MS.gene24290.t1 MTR_2g034480 35.465 344 211 8 8 349 10 344 1.04e-60 203
MS.gene24290.t1 MTR_4g076570 37.500 320 192 5 24 343 22 333 2.29e-60 202
MS.gene24290.t1 MTR_4g076430 36.795 337 195 10 4 340 6 324 3.05e-60 201
MS.gene24290.t1 MTR_4g076255 36.170 329 192 8 13 341 17 327 5.11e-58 195
MS.gene24290.t1 MTR_3g095050 29.677 465 282 19 18 474 28 455 2.50e-55 192
MS.gene24290.t1 MTR_4g112025 29.916 478 284 17 9 472 14 454 3.80e-55 192
MS.gene24290.t1 MTR_7g081370 35.000 340 196 8 3 340 5 321 3.82e-55 187
MS.gene24290.t1 MTR_4g124440 29.350 477 288 16 3 468 5 443 3.99e-55 192
MS.gene24290.t1 MTR_2g034470 34.111 343 213 9 24 363 30 362 6.84e-55 187
MS.gene24290.t1 MTR_2g034440 34.936 312 191 8 24 333 22 323 1.15e-54 186
MS.gene24290.t1 MTR_1g053320 29.498 478 292 15 5 472 12 454 3.95e-54 189
MS.gene24290.t1 MTR_2g034470 33.631 336 210 9 31 363 2 327 4.09e-52 179
MS.gene24290.t1 MTR_2g027560 29.487 468 282 16 20 477 24 453 3.39e-51 181
MS.gene24290.t1 MTR_1g010120 29.565 460 278 15 24 474 26 448 8.66e-51 179
MS.gene24290.t1 MTR_7g085390 29.935 461 273 17 24 472 26 448 4.63e-50 178
MS.gene24290.t1 MTR_8g092070 27.719 469 291 15 22 477 32 465 5.39e-50 179
MS.gene24290.t1 MTR_3g108600 28.211 475 278 15 8 474 16 435 1.39e-45 166
MS.gene24290.t1 MTR_5g081720 35.786 299 183 6 45 341 58 349 2.07e-45 162
MS.gene24290.t1 MTR_6g032820 28.571 448 269 16 24 457 26 436 5.99e-45 163
MS.gene24290.t1 MTR_3g031770 28.233 464 291 14 16 474 19 445 5.14e-42 156
MS.gene24290.t1 MTR_4g134280 27.513 378 225 14 110 477 1 339 1.95e-32 127
MS.gene24290.t1 MTR_8g089400 44.898 98 53 1 379 475 25 122 1.96e-24 99.8
MS.gene24290.t1 MTR_8g089400 44.898 98 53 1 379 475 45 142 5.76e-24 99.0
MS.gene24290.t1 MTR_8g085440 51.190 84 41 0 391 474 32 115 1.83e-23 95.5
MS.gene24290.t1 MTR_8g085390 48.235 85 44 0 390 474 29 113 1.84e-22 95.1
MS.gene24290.t1 MTR_3g048280 40.152 132 69 5 352 477 71 198 1.00e-21 93.6
MS.gene24290.t1 MTR_8g085420 50.633 79 39 0 391 469 32 110 3.43e-21 89.7
MS.gene24290.t1 MTR_5g091650 42.373 118 49 4 373 474 77 191 1.54e-20 89.7
MS.gene24290.t1 MTR_5g091650 42.373 118 49 4 373 474 77 191 5.61e-20 90.1
MS.gene24290.t1 MTR_4g109490 44.681 94 51 1 381 474 14 106 4.60e-19 86.3
MS.gene24290.t1 MTR_7g111600 49.425 87 38 3 391 474 160 243 5.87e-19 87.0
MS.gene24290.t1 MTR_7g111600 41.259 143 58 7 354 474 105 243 1.00e-18 87.0
MS.gene24290.t1 MTR_2g049670 45.882 85 45 1 391 475 158 241 1.38e-18 87.0
MS.gene24290.t1 MTR_1g084820 50.633 79 38 1 390 468 419 496 2.06e-18 88.6
MS.gene24290.t1 MTR_1g084820 50.633 79 38 1 390 468 419 496 2.36e-18 88.6
MS.gene24290.t1 MTR_7g111600 41.259 143 58 7 354 474 105 243 2.94e-18 85.9
MS.gene24290.t1 MTR_4g036775 34.426 122 73 3 242 361 80 196 9.49e-18 82.4
MS.gene24290.t1 MTR_5g044530 44.681 94 50 1 383 474 14 107 9.65e-18 83.2
MS.gene24290.t1 MTR_8g085400 47.500 80 39 1 391 470 33 109 1.14e-17 79.3
MS.gene24290.t1 MTR_1g116870 42.857 84 48 0 391 474 276 359 1.16e-17 84.7
MS.gene24290.t1 MTR_4g036680 34.426 122 73 3 242 361 80 196 1.75e-17 81.6
MS.gene24290.t1 MTR_3g082080 46.154 78 42 0 391 468 157 234 3.39e-17 81.6
MS.gene24290.t1 MTR_2g072500 40.449 89 52 1 386 474 3 90 1.29e-16 75.5
MS.gene24290.t1 MTR_5g097420 43.529 85 47 1 391 474 30 114 9.89e-16 73.9
MS.gene24290.t1 MTR_8g088120 53.333 75 29 3 403 474 60 131 1.27e-15 76.3
MS.gene24290.t1 MTR_4g079530 43.182 88 49 1 391 477 37 124 1.34e-15 73.6
MS.gene24290.t1 MTR_4g079530 43.182 88 49 1 391 477 37 124 3.73e-15 73.9
MS.gene24290.t1 MTR_4g083070 42.222 90 51 1 386 474 16 105 5.64e-15 73.9
MS.gene24290.t1 MTR_5g015720 43.023 86 47 2 391 474 329 414 2.44e-14 75.1
MS.gene24290.t1 MTR_4g133735 37.647 85 52 1 389 472 26 110 3.18e-14 69.3
MS.gene24290.t1 MTR_8g063490 28.099 121 55 3 294 414 4 92 7.34e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24290.t1 AT4G34480 63.889 468 139 4 8 474 9 447 0.0 597
MS.gene24290.t1 AT2G16230 63.053 452 141 3 23 474 24 449 0.0 585
MS.gene24290.t1 AT5G42720 59.016 427 148 8 1 411 1 416 1.12e-173 495
MS.gene24290.t1 AT4G34480 69.565 345 103 2 8 351 9 352 1.27e-170 484
MS.gene24290.t1 AT4G34480 61.370 365 112 2 110 474 1 336 8.60e-156 448
MS.gene24290.t1 AT5G24318 45.415 458 219 8 20 474 26 455 9.38e-138 404
MS.gene24290.t1 AT5G24318 45.374 454 217 8 20 470 26 451 1.28e-135 399
MS.gene24290.t1 AT5G55180 37.118 458 263 5 23 478 26 460 7.81e-106 323
MS.gene24290.t1 AT3G55430 37.281 456 246 13 24 474 29 449 1.18e-105 322
MS.gene24290.t1 AT2G05790 37.581 463 264 9 24 477 25 471 2.66e-105 322
MS.gene24290.t1 AT5G24318 47.416 329 165 4 20 346 26 348 1.02e-104 317
MS.gene24290.t1 AT4G26830 35.729 473 276 6 8 478 9 455 3.30e-104 318
MS.gene24290.t1 AT4G26830 36.245 458 264 6 23 478 28 459 1.01e-103 317
MS.gene24290.t1 AT4G29360 37.901 467 283 5 9 474 15 475 1.56e-103 319
MS.gene24290.t1 AT5G55180 37.500 448 255 5 23 468 26 450 1.68e-103 317
MS.gene24290.t1 AT4G29360 37.684 475 283 6 9 474 15 485 1.52e-102 317
MS.gene24290.t1 AT2G39640 34.937 478 267 7 1 472 1 440 1.21e-100 312
MS.gene24290.t1 AT2G39640 42.169 83 48 0 391 473 460 542 1.73e-18 88.6
MS.gene24290.t1 AT5G56590 35.948 459 265 5 24 478 26 459 1.73e-100 311
MS.gene24290.t1 AT5G24318 45.190 343 159 6 134 474 1 316 7.04e-99 300
MS.gene24290.t1 AT2G01630 36.957 460 253 5 21 476 20 446 7.92e-99 306
MS.gene24290.t1 AT1G32860 47.840 324 165 3 24 345 29 350 1.05e-98 303
MS.gene24290.t1 AT1G30080 47.500 320 166 2 24 343 36 353 1.12e-98 302
MS.gene24290.t1 AT1G30080 47.500 320 166 2 24 343 36 353 2.60e-98 302
MS.gene24290.t1 AT2G01630 37.168 452 247 5 21 468 20 438 8.73e-97 299
MS.gene24290.t1 AT1G11820 35.512 459 261 4 21 476 41 467 1.12e-94 296
MS.gene24290.t1 AT4G18340 44.286 350 191 3 4 351 12 359 1.91e-93 288
MS.gene24290.t1 AT4G18340 44.286 350 191 3 4 351 12 359 2.61e-93 288
MS.gene24290.t1 AT2G27500 42.056 321 185 1 24 344 29 348 7.12e-92 284
MS.gene24290.t1 AT2G27500 41.925 322 186 1 24 345 29 349 2.04e-91 283
MS.gene24290.t1 AT1G66250 35.637 463 260 6 18 476 26 454 2.26e-91 287
MS.gene24290.t1 AT1G11820 35.255 451 257 4 21 468 41 459 3.77e-91 286
MS.gene24290.t1 AT3G07320 35.307 456 263 9 25 474 26 455 1.66e-88 278
MS.gene24290.t1 AT5G42100 43.827 324 177 4 24 344 27 348 2.42e-87 274
MS.gene24290.t1 AT3G13560 35.667 457 258 4 23 476 25 448 2.79e-87 276
MS.gene24290.t1 AT3G13560 35.667 457 258 4 23 476 25 448 2.79e-87 276
MS.gene24290.t1 AT3G13560 35.667 457 258 4 23 476 25 448 2.79e-87 276
MS.gene24290.t1 AT3G13560 35.667 457 258 4 23 476 25 448 2.79e-87 276
MS.gene24290.t1 AT3G13560 35.667 457 258 4 23 476 25 448 2.79e-87 276
MS.gene24290.t1 AT5G42100 43.827 324 177 4 24 344 27 348 4.99e-87 273
MS.gene24290.t1 AT3G23770 33.624 458 274 9 24 474 37 471 2.12e-85 271
MS.gene24290.t1 AT4G14080 33.260 457 274 9 24 474 42 473 3.81e-85 270
MS.gene24290.t1 AT3G15800 41.818 330 190 2 25 353 44 372 1.79e-84 266
MS.gene24290.t1 AT2G26600 38.415 328 201 1 25 352 35 361 1.77e-82 260
MS.gene24290.t1 AT2G01630 37.028 397 214 4 21 414 20 383 1.31e-79 253
MS.gene24290.t1 AT3G46570 41.880 351 190 10 2 346 4 346 9.26e-77 244
MS.gene24290.t1 AT2G27500 42.647 272 155 1 74 345 1 271 3.92e-76 241
MS.gene24290.t1 AT1G11820 38.199 322 196 2 21 340 41 361 1.56e-72 234
MS.gene24290.t1 AT3G61810 39.763 337 185 7 16 345 47 372 5.87e-71 230
MS.gene24290.t1 AT2G26600 39.552 268 161 1 85 352 1 267 1.12e-65 214
MS.gene24290.t1 AT3G57270 39.498 319 183 6 24 341 27 336 3.52e-65 214
MS.gene24290.t1 AT4G16260 40.129 309 175 6 24 332 24 322 2.18e-64 212
MS.gene24290.t1 AT4G16260 39.735 302 172 6 31 332 2 293 9.30e-62 204
MS.gene24290.t1 AT1G77780 38.757 338 188 10 10 341 7 331 2.87e-59 199
MS.gene24290.t1 AT3G57260 36.875 320 186 8 24 342 32 336 3.08e-59 198
MS.gene24290.t1 AT3G57260 36.875 320 186 8 24 342 48 352 3.81e-59 199
MS.gene24290.t1 AT5G20870 29.448 489 290 16 3 474 9 459 1.69e-58 201
MS.gene24290.t1 AT5G20390 36.991 319 189 8 24 340 33 341 5.97e-57 192
MS.gene24290.t1 AT4G31140 29.769 477 286 16 8 474 11 448 2.10e-56 195
MS.gene24290.t1 AT5G20340 36.875 320 190 8 24 341 43 352 4.77e-55 188
MS.gene24290.t1 AT3G24330 30.217 460 274 16 24 472 39 462 8.40e-53 186
MS.gene24290.t1 AT5G20330 36.760 321 187 8 24 340 34 342 1.39e-52 181
MS.gene24290.t1 AT1G33220 35.410 305 187 6 24 327 34 329 8.21e-50 173
MS.gene24290.t1 AT5G64790 27.489 462 286 15 24 474 28 451 1.39e-49 177
MS.gene24290.t1 AT1G77790 35.443 316 193 7 28 341 34 340 1.97e-49 172
MS.gene24290.t1 AT3G57240 35.897 312 179 11 24 332 35 328 5.94e-49 171
MS.gene24290.t1 AT5G58090 27.826 460 287 15 24 474 22 445 2.59e-48 173
MS.gene24290.t1 AT2G19440 30.803 461 268 19 24 472 21 442 1.54e-47 171
MS.gene24290.t1 AT2G19440 30.803 461 268 19 24 472 21 442 1.54e-47 171
MS.gene24290.t1 AT1G64760 29.545 484 288 19 1 472 4 446 5.01e-47 169
MS.gene24290.t1 AT1G64760 29.545 484 288 19 1 472 4 446 5.01e-47 169
MS.gene24290.t1 AT5G20560 35.048 311 192 7 24 333 34 335 5.96e-47 166
MS.gene24290.t1 AT5G18220 27.851 456 290 12 24 472 30 453 2.53e-46 168
MS.gene24290.t1 AT5G58480 28.322 459 283 14 24 475 26 445 1.65e-45 166
MS.gene24290.t1 AT3G55780 34.899 298 182 8 53 345 64 354 7.09e-45 161
MS.gene24290.t1 AT3G04010 27.766 461 283 15 24 472 33 455 4.72e-43 159
MS.gene24290.t1 AT4G17180 27.115 461 287 15 24 477 25 443 1.92e-42 157
MS.gene24290.t1 AT4G09462 48.810 84 43 0 391 474 29 112 1.20e-25 101
MS.gene24290.t1 AT4G09465 47.619 84 44 0 391 474 31 114 3.18e-25 100
MS.gene24290.t1 AT4G09467 47.619 84 44 0 391 474 31 114 3.55e-25 100
MS.gene24290.t1 AT4G09464 47.619 84 44 0 391 474 31 114 3.55e-25 100
MS.gene24290.t1 AT4G09466 47.619 84 44 0 391 474 31 114 9.93e-25 99.0
MS.gene24290.t1 AT4G05430 45.361 97 52 1 379 474 11 107 1.60e-24 99.4
MS.gene24290.t1 AT5G63230 47.619 84 44 0 391 474 26 109 2.25e-24 97.8
MS.gene24290.t1 AT1G66855 48.837 86 43 1 391 475 26 111 2.71e-24 97.8
MS.gene24290.t1 AT4G05430 45.361 97 52 1 379 474 36 132 5.19e-24 99.0
MS.gene24290.t1 AT1G18650 48.315 89 46 0 386 474 16 104 8.56e-24 98.6
MS.gene24290.t1 AT1G18650 49.425 87 44 0 386 472 16 102 1.17e-23 96.7
MS.gene24290.t1 AT1G66870 46.512 86 45 1 391 475 26 111 1.30e-23 95.9
MS.gene24290.t1 AT1G66870 46.512 86 45 1 391 475 53 138 1.61e-23 96.3
MS.gene24290.t1 AT5G63225 47.253 91 48 0 384 474 18 108 2.09e-23 95.1
MS.gene24290.t1 AT4G09090 41.573 89 52 0 387 475 27 115 2.96e-23 95.1
MS.gene24290.t1 AT5G61130 47.191 89 47 0 386 474 16 104 8.27e-23 96.3
MS.gene24290.t1 AT5G63250 44.828 87 45 1 391 474 42 128 3.67e-22 92.4
MS.gene24290.t1 AT4G13600 47.619 84 44 0 391 474 61 144 4.24e-22 95.1
MS.gene24290.t1 AT5G63240 41.441 111 60 2 367 474 18 126 4.97e-22 92.0
MS.gene24290.t1 AT4G05430 45.055 91 49 1 379 468 36 126 1.38e-21 90.5
MS.gene24290.t1 AT4G16165 45.349 86 46 1 391 475 26 111 1.92e-20 87.0
MS.gene24290.t1 AT1G66852 44.186 86 46 2 391 475 26 110 5.75e-20 85.5
MS.gene24290.t1 AT2G29735 48.837 86 42 1 391 474 31 116 2.81e-19 84.0
MS.gene24290.t1 AT2G43670 40.476 84 49 1 391 474 35 117 5.58e-19 83.2
MS.gene24290.t1 AT5G67460 38.889 126 72 3 352 474 254 377 8.21e-19 88.6
MS.gene24290.t1 AT5G08000 46.067 89 48 0 386 474 16 104 1.00e-18 84.7
MS.gene24290.t1 AT5G08000 48.235 85 44 0 390 474 39 123 2.64e-18 84.0
MS.gene24290.t1 AT1G09460 45.361 97 51 2 383 479 129 223 3.64e-18 85.9
MS.gene24290.t1 AT5G53600 42.857 84 47 1 391 474 29 111 6.54e-18 79.7
MS.gene24290.t1 AT2G30933 44.086 93 46 3 385 474 76 165 3.91e-17 80.9
MS.gene24290.t1 AT1G78520 41.667 84 48 1 391 474 32 114 4.11e-17 77.8
MS.gene24290.t1 AT5G67460 39.167 120 68 3 352 468 254 371 1.21e-16 82.0
MS.gene24290.t1 AT2G30933 40.909 110 54 5 366 468 54 159 1.77e-16 77.4
MS.gene24290.t1 AT2G30933 40.909 110 54 5 366 468 54 159 1.77e-16 77.4
MS.gene24290.t1 AT1G29380 45.455 88 42 3 391 475 148 232 3.69e-16 79.0
MS.gene24290.t1 AT1G79480 40.476 84 50 0 391 474 310 393 3.89e-16 80.5
MS.gene24290.t1 AT1G79480 40.476 84 50 0 391 474 311 394 3.91e-16 80.5
MS.gene24290.t1 AT1G69295 46.341 82 43 1 387 468 17 97 4.62e-16 77.8
MS.gene24290.t1 AT1G29380 45.977 87 41 3 391 474 148 231 4.92e-16 79.3
MS.gene24290.t1 AT2G04910 41.176 85 49 1 391 474 15 99 8.45e-16 73.6
MS.gene24290.t1 AT1G13830 41.860 86 48 1 391 474 21 106 9.49e-16 76.3
MS.gene24290.t1 AT5G53610 42.683 82 46 1 391 472 28 108 1.07e-15 73.6
MS.gene24290.t1 AT1G13830 41.860 86 48 1 391 474 35 120 1.25e-15 76.3
MS.gene24290.t1 AT1G29380 46.429 84 39 3 391 471 148 228 2.99e-15 75.5
MS.gene24290.t1 AT1G29380 46.429 84 39 3 391 471 148 228 2.99e-15 75.5
MS.gene24290.t1 AT1G69295 45.570 79 42 1 390 468 16 93 6.55e-15 74.3
MS.gene24290.t1 AT5G35740 41.860 86 48 2 391 474 30 115 9.13e-15 71.2
MS.gene24290.t1 AT2G43660 38.372 86 52 1 390 474 34 119 9.73e-15 71.2
MS.gene24290.t1 AT2G43660 38.372 86 52 1 390 474 33 118 1.04e-14 70.9
MS.gene24290.t1 AT2G03505 37.778 90 54 1 387 474 17 106 1.48e-14 70.5
MS.gene24290.t1 AT2G03505 37.778 90 54 1 387 474 17 106 1.62e-14 72.0
MS.gene24290.t1 AT2G03505 37.778 90 54 1 387 474 17 106 1.62e-14 72.0
MS.gene24290.t1 AT2G03505 37.778 90 54 1 387 474 17 106 1.62e-14 72.0
MS.gene24290.t1 AT3G58100 41.176 85 49 1 391 474 41 125 6.76e-14 70.5
MS.gene24290.t1 AT1G26450 44.737 76 41 1 387 462 17 91 9.94e-14 70.5
MS.gene24290.t1 AT2G04910 41.772 79 45 1 391 468 15 93 9.98e-14 68.2
MS.gene24290.t1 AT3G58100 41.176 85 49 1 391 474 117 201 2.20e-13 70.5
MS.gene24290.t1 AT3G28250 38.750 80 48 1 389 468 1 79 1.27e-12 65.1

Find 135 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTTGGTGGTAAAATT+AGG 0.082325 1.1:+2144611 MS.gene24290:CDS
TGTGCAACTACAAGCAAATT+TGG 0.210617 1.1:+2145931 MS.gene24290:CDS
TAGATCTGCACTAGATTCTA+TGG 0.240384 1.1:+2145104 MS.gene24290:CDS
TCCTGGAAGGGCTGATAATT+TGG 0.251824 1.1:+2144801 MS.gene24290:CDS
GGGTTTGTTGTCGTTTAATA+AGG 0.272334 1.1:+2144723 MS.gene24290:CDS
AACATGACAAGAATGGTTTC+TGG 0.284683 1.1:+2142672 None:intergenic
TTCTCTTGGTGGTAAAATTA+GGG 0.311256 1.1:+2144612 MS.gene24290:CDS
GTTGGCGAGGGATTTGATTA+TGG 0.311492 1.1:-2144362 None:intergenic
TCCGATTACAATTCCGATTC+CGG 0.315603 1.1:-2144386 None:intergenic
TTGTCGTTTAATAAGGATAC+TGG 0.317569 1.1:+2144730 MS.gene24290:CDS
TATAATAGTTGTATTTATAC+TGG 0.317977 1.1:+2146709 MS.gene24290:CDS
CATGAATATGTTTGATGCTC+AGG 0.324784 1.1:+2144882 MS.gene24290:CDS
GACCGGCATTAGGTTGAAAA+AGG 0.325112 1.1:-2144831 None:intergenic
CATGCTATGTTACTATTATA+CGG 0.335966 1.1:-2145881 None:intergenic
ACATCAGTTAATCCTGCTTT+TGG 0.340038 1.1:-2145911 None:intergenic
GATTAAGCACCTGCGATCTA+AGG 0.346796 1.1:+2145236 MS.gene24290:CDS
GTTGTTGGACTTGGAACTTT+TGG 0.356417 1.1:-2145857 None:intergenic
GTTGGTGGAAATCCAGGTTT+TGG 0.362874 1.1:-2144455 None:intergenic
GCATCAACTCGACCGGCATT+AGG 0.367245 1.1:-2144841 None:intergenic
AATGATACAAATCTTATTAA+CGG 0.369125 1.1:+2144544 MS.gene24290:CDS
GCATGGTTAGCTAATGTGTT+AGG 0.371637 1.1:-2146016 None:intergenic
TTACTATTATACGGCGTTGT+TGG 0.396054 1.1:-2145872 None:intergenic
GCTGGTTCTGAGAAAGCCTT+CGG 0.400618 1.1:+2145336 MS.gene24290:CDS
TACAATTCCGATTCCGGTGT+TGG 0.404377 1.1:-2144380 None:intergenic
CCATTCCTCGGAGTAAACTA+TGG 0.408450 1.1:+2144244 MS.gene24290:CDS
GGATAAGGATTAATAGCAAA+AGG 0.408820 1.1:-2144757 None:intergenic
GATAAGGATTAATAGCAAAA+GGG 0.410562 1.1:-2144756 None:intergenic
AACTCGGAGCCACCTTCTGC+TGG 0.410697 1.1:+2144667 MS.gene24290:CDS
TTATAAGCAAAATAAGGATA+AGG 0.414067 1.1:-2144772 None:intergenic
CTGGTTCTGAGAAAGCCTTC+GGG 0.427029 1.1:+2145337 MS.gene24290:CDS
TCCCTCGCCAACACCGGAAT+CGG 0.431599 1.1:+2144373 MS.gene24290:CDS
ATGTTGCTGGCGGGATAGTA+AGG 0.437537 1.1:-2144484 None:intergenic
TTTGCTTATAAAAGTGATCC+TGG 0.441378 1.1:+2144784 MS.gene24290:CDS
ATCCAAGTTTCGCCAAAACC+TGG 0.446819 1.1:+2144443 MS.gene24290:CDS
GAGGACGTTGGTGGAAATCC+AGG 0.449002 1.1:-2144461 None:intergenic
TTATACGGCGTTGTTGGACT+TGG 0.451067 1.1:-2145866 None:intergenic
GGATTTGATTATGGCGGGAT+CGG 0.452407 1.1:-2144353 None:intergenic
GCAAATTTGGATTATGCTTG+TGG 0.452527 1.1:+2145944 MS.gene24290:CDS
GCCAAATTATCAGCCCTTCC+AGG 0.454800 1.1:-2144802 None:intergenic
GGAGGGTATGTCGCCGTTTG+CGG 0.457744 1.1:-2144410 None:intergenic
ATCTCTTCTATCACACTGTT+GGG 0.461725 1.1:+2146053 MS.gene24290:CDS
GCTTTCTCAGAACCAGCTCC+AGG 0.467861 1.1:-2145330 None:intergenic
CAAGGTAAACATGACAAGAA+TGG 0.469473 1.1:+2142665 None:intergenic
ACCGGAATCGGAATTGTAAT+CGG 0.470248 1.1:+2144385 MS.gene24290:CDS
GAGATTGTAGTTGCGGAGAC+AGG 0.471308 1.1:+2145141 MS.gene24290:CDS
TATGATGAGGACTTGAAGCC+TGG 0.475102 1.1:+2145312 MS.gene24290:CDS
CTTGATGAAGCTTCTCTTGG+TGG 0.477574 1.1:+2144601 MS.gene24290:CDS
GCGCTTGATGAAGCTTCTCT+TGG 0.478524 1.1:+2144598 MS.gene24290:CDS
CCATAGTTTACTCCGAGGAA+TGG 0.481901 1.1:-2144244 None:intergenic
TTGGATTATGCTTGTGGGCA+GGG 0.482048 1.1:+2145950 MS.gene24290:CDS
TGGATTATGCTTGTGGGCAG+GGG 0.487006 1.1:+2145951 MS.gene24290:CDS
TAGTAGCCCCGTGGTATCTC+CGG 0.488228 1.1:+2145434 MS.gene24290:CDS
TTTCGAAGGCGGTGGTTTGG+AGG 0.488710 1.1:-2144312 None:intergenic
CGGTGGCGGATGCTGGTGGA+AGG 0.489604 1.1:-2144282 None:intergenic
CAAATTTGGATTATGCTTGT+GGG 0.491169 1.1:+2145945 MS.gene24290:CDS
TTTGGATTATGCTTGTGGGC+AGG 0.494350 1.1:+2145949 MS.gene24290:CDS
TCCGATTCCGGTGTTGGCGA+GGG 0.494660 1.1:-2144374 None:intergenic
GTGGAAGGTTGTCGGCGACT+TGG 0.495042 1.1:-2144267 None:intergenic
CATAGTTTACTCCGAGGAAT+GGG 0.498903 1.1:-2144243 None:intergenic
GGATGTTGAGATTGTAGTTG+CGG 0.503544 1.1:+2145134 MS.gene24290:CDS
TGGTAAAATTAGGGTTTCTA+CGG 0.503871 1.1:+2144621 MS.gene24290:CDS
GCGAGGGATTTGATTATGGC+GGG 0.506513 1.1:-2144358 None:intergenic
AATCTCTTCTATCACACTGT+TGG 0.507292 1.1:+2146052 MS.gene24290:CDS
GGATGCTGGTGGAAGGTTGT+CGG 0.507464 1.1:-2144275 None:intergenic
TCGTCGTTATCTCCATTGTA+AGG 0.508554 1.1:-2145168 None:intergenic
AGCACCTGCGATCTAAGGTT+GGG 0.513066 1.1:+2145241 MS.gene24290:CDS
GCATGGTGTGTGCCAAAAGC+AGG 0.513211 1.1:+2145899 MS.gene24290:CDS
AGATCTGCACTAGATTCTAT+GGG 0.515532 1.1:+2145105 MS.gene24290:CDS
GAGGACTTGAAGCCTGGAGC+TGG 0.515732 1.1:+2145318 MS.gene24290:CDS
ACTGATTTCCCTGGCATCAG+TGG 0.516517 1.1:-2145267 None:intergenic
GGTGATGAGGATGATGTTGC+TGG 0.516557 1.1:-2144497 None:intergenic
GCCTTTGCATTCTCAATACT+CGG 0.519040 1.1:-2145198 None:intergenic
GTTGGGACACCACTGATGCC+AGG 0.519883 1.1:+2145258 MS.gene24290:CDS
TTCCGATTCCGGTGTTGGCG+AGG 0.521696 1.1:-2144375 None:intergenic
AATGGAGATAACGACGAGGC+TGG 0.525920 1.1:+2145174 MS.gene24290:CDS
GGTTCAAAACAAGCACCTCC+TGG 0.528280 1.1:-2145995 None:intergenic
ATTGTAATCGGAGCCGCAAA+CGG 0.531017 1.1:+2144397 MS.gene24290:CDS
ATCAAATCCCTCGCCAACAC+CGG 0.533535 1.1:+2144367 MS.gene24290:CDS
CTTATAAAAGTGATCCTGGA+AGG 0.535941 1.1:+2144788 MS.gene24290:CDS
GGCGAGGGATTTGATTATGG+CGG 0.537617 1.1:-2144359 None:intergenic
CTTCAAGTCCTCATCATACA+AGG 0.538927 1.1:-2145307 None:intergenic
CGACAACAAACCCTGCAAAA+CGG 0.539250 1.1:-2144713 None:intergenic
AGTATTTGCATCAACTCGAC+CGG 0.541663 1.1:-2144848 None:intergenic
ATAGTAAGGGAGGACGTTGG+TGG 0.542466 1.1:-2144470 None:intergenic
AAGCACCTGCGATCTAAGGT+TGG 0.545052 1.1:+2145240 MS.gene24290:CDS
TGTGAGGAAACTTACTTGCA+AGG 0.552392 1.1:-2142722 None:intergenic
ATAGTTGTATTTATACTGGA+GGG 0.553455 1.1:+2146713 MS.gene24290:CDS
CATCTTTGCCTTGTATGATG+AGG 0.556762 1.1:+2145299 MS.gene24290:CDS
TAGTGCTTTGTTGCTTAGAG+AGG 0.556972 1.1:-2145398 None:intergenic
AATAGTTGTATTTATACTGG+AGG 0.558577 1.1:+2146712 MS.gene24290:CDS
GATACCACGGGGCTACTAGT+AGG 0.558920 1.1:-2145429 None:intergenic
AGTGTGATAGAAGAGATTCA+TGG 0.564034 1.1:-2146047 None:intergenic
ATCAGTGTTGTAAAGCCCGA+AGG 0.564335 1.1:-2145352 None:intergenic
GTGTCCCAACCTTAGATCGC+AGG 0.566462 1.1:-2145245 None:intergenic
CAAAACAAGCACCTCCTGGT+TGG 0.568304 1.1:-2145991 None:intergenic
ATAAGGATTAATAGCAAAAG+GGG 0.575778 1.1:-2144755 None:intergenic
TTTGCGGTGGCGGATGCTGG+TGG 0.579027 1.1:-2144286 None:intergenic
GCAGAATCTGACCCATTCCT+CGG 0.583867 1.1:+2144232 MS.gene24290:intron
CTTCGTTGCCGACGGTGATG+AGG 0.587261 1.1:-2144510 None:intergenic
CAAACGATGATCTATGACGC+TGG 0.587813 1.1:+2145375 MS.gene24290:CDS
AGATTGTAGTTGCGGAGACA+GGG 0.588247 1.1:+2145142 MS.gene24290:CDS
ACTTGGATCGGAAGCGAGGG+AGG 0.590059 1.1:-2144428 None:intergenic
ATGAGGATGATGTTGCTGGC+GGG 0.593640 1.1:-2144493 None:intergenic
TCATGAAAACTTCCAGCAGA+AGG 0.595377 1.1:-2144679 None:intergenic
TAAGTGTCCACTGATTTCCC+TGG 0.596288 1.1:-2145276 None:intergenic
CGAAACTTGGATCGGAAGCG+AGG 0.597502 1.1:-2144432 None:intergenic
TTCTACGGTTCATACGATGT+CGG 0.598813 1.1:+2144636 MS.gene24290:CDS
GAGACAGGGTGGCCTTACAA+TGG 0.599726 1.1:+2145156 MS.gene24290:CDS
TTGGGACACCACTGATGCCA+GGG 0.599886 1.1:+2145259 MS.gene24290:CDS
CGTATAATAGTAACATAGCA+TGG 0.600001 1.1:+2145882 MS.gene24290:CDS
GAAACTTGGATCGGAAGCGA+GGG 0.603669 1.1:-2144431 None:intergenic
CGGGATCGGTTCCGTATAGT+CGG 0.611085 1.1:-2144339 None:intergenic
AATTCATACCGGAGATACCA+CGG 0.615954 1.1:-2145442 None:intergenic
GATTGTAGCTTAATCCAACC+AGG 0.618358 1.1:+2145977 MS.gene24290:CDS
AACATCATCCTCATCACCGT+CGG 0.621796 1.1:+2144502 MS.gene24290:CDS
ATTCATACCGGAGATACCAC+GGG 0.621948 1.1:-2145441 None:intergenic
TTATAAAAGTGATCCTGGAA+GGG 0.632786 1.1:+2144789 MS.gene24290:CDS
CTTGGATCGGAAGCGAGGGA+GGG 0.633878 1.1:-2144427 None:intergenic
GAGAATGCAAAGGCTTACAA+TGG 0.637829 1.1:+2145207 MS.gene24290:CDS
TGTTGCTGGCGGGATAGTAA+GGG 0.641175 1.1:-2144483 None:intergenic
TGAAAACTTCCAGCAGAAGG+TGG 0.643067 1.1:-2144676 None:intergenic
GATTCATGGCGTATGCAGCA+TGG 0.644106 1.1:-2146033 None:intergenic
ACCGAGTATTGAGAATGCAA+AGG 0.650369 1.1:+2145197 MS.gene24290:CDS
TGCTGGCGGGATAGTAAGGG+AGG 0.653268 1.1:-2144480 None:intergenic
AGTGATGACTTCGTTGCCGA+CGG 0.661992 1.1:-2144518 None:intergenic
GATGAGGATGATGTTGCTGG+CGG 0.665630 1.1:-2144494 None:intergenic
ACGGGGCTACTAGTAGGTGT+AGG 0.667625 1.1:-2145423 None:intergenic
GGGATAGTAAGGGAGGACGT+TGG 0.674640 1.1:-2144473 None:intergenic
ACTGATGCCAGGGAAATCAG+TGG 0.687146 1.1:+2145269 MS.gene24290:CDS
TTGTAGTTGCGGAGACAGGG+TGG 0.701726 1.1:+2145145 MS.gene24290:CDS
CTTGGCCATAGTTTACTCCG+AGG 0.717839 1.1:-2144249 None:intergenic
TACACCTACTAGTAGCCCCG+TGG 0.742913 1.1:+2145425 MS.gene24290:CDS
TGTAGCTTAATCCAACCAGG+AGG 0.770988 1.1:+2145980 MS.gene24290:CDS
TTCATACCGGAGATACCACG+GGG 0.792540 1.1:-2145440 None:intergenic
TTACAATGGAGATAACGACG+AGG 0.806815 1.1:+2145170 MS.gene24290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTATATATATTATCAAAT+AGG - chr1.1:2143527-2143546 None:intergenic 10.0%
!!! CTATTTGATAATATATATAA+TGG + chr1.1:2143525-2143544 MS.gene24290:intron 10.0%
!! AATGATACAAATCTTATTAA+CGG + chr1.1:2144544-2144563 MS.gene24290:CDS 15.0%
!! AGAGAATTAAAAAAAAAAAC+TGG + chr1.1:2143879-2143898 MS.gene24290:intron 15.0%
!! GTTTAAACAATACTATATTA+GGG + chr1.1:2146340-2146359 MS.gene24290:intron 15.0%
!! TATAATAGTTGTATTTATAC+TGG + chr1.1:2146709-2146728 MS.gene24290:CDS 15.0%
!! TGTTTAAACAATACTATATT+AGG + chr1.1:2146339-2146358 MS.gene24290:intron 15.0%
!! TTAAAACATCATCAAAAATT+AGG - chr1.1:2142901-2142920 None:intergenic 15.0%
!!! ATATACTTTGTTTATTTTGT+AGG + chr1.1:2146685-2146704 MS.gene24290:intron 15.0%
!!! TAATTTTGTGAATTAAAACT+GGG + chr1.1:2143027-2143046 MS.gene24290:intron 15.0%
!! AACATTTCTTATTCTAACTA+TGG + chr1.1:2143394-2143413 MS.gene24290:intron 20.0%
!! AGACAAAAGTTATTAGAAAA+TGG - chr1.1:2146485-2146504 None:intergenic 20.0%
!! AGTTAATAACTGATTATTAG+TGG + chr1.1:2146369-2146388 MS.gene24290:intron 20.0%
!! ATGTAATCAGAATTGATATT+TGG - chr1.1:2144913-2144932 None:intergenic 20.0%
!! ATTCAATCATCATTCAAAAT+CGG - chr1.1:2143763-2143782 None:intergenic 20.0%
!! ATTCACAAAATTAGAGATTA+TGG - chr1.1:2143020-2143039 None:intergenic 20.0%
!! GTTAATAACTGATTATTAGT+GGG + chr1.1:2146370-2146389 MS.gene24290:intron 20.0%
!! TCTATTTAATCTGTTCTTAA+CGG + chr1.1:2142955-2142974 MS.gene24290:intron 20.0%
!! TTAATAACTGATTATTAGTG+GGG + chr1.1:2146371-2146390 MS.gene24290:intron 20.0%
!! TTATAAGCAAAATAAGGATA+AGG - chr1.1:2144775-2144794 None:intergenic 20.0%
!!! ATAGAAGAATTTTTAAGTAG+AGG + chr1.1:2144088-2144107 MS.gene24290:intron 20.0%
!!! CTAATTTTGTGAATTAAAAC+TGG + chr1.1:2143026-2143045 MS.gene24290:intron 20.0%
!!! TAATTATAAGCTCAGTTTTA+AGG - chr1.1:2143672-2143691 None:intergenic 20.0%
!!! TCACTTTTATAAGCAAAATA+AGG - chr1.1:2144781-2144800 None:intergenic 20.0%
!!! TTGTTTATCACTTTAGATTT+TGG + chr1.1:2146574-2146593 MS.gene24290:intron 20.0%
! AAACAAATGAAAAATGCTAG+CGG - chr1.1:2142924-2142943 None:intergenic 25.0%
! AATAGTTGTATTTATACTGG+AGG + chr1.1:2146712-2146731 MS.gene24290:CDS 25.0%
! ATAAGGATTAATAGCAAAAG+GGG - chr1.1:2144758-2144777 None:intergenic 25.0%
! ATAGTTGTATTTATACTGGA+GGG + chr1.1:2146713-2146732 MS.gene24290:CDS 25.0%
! CATGCTATGTTACTATTATA+CGG - chr1.1:2145884-2145903 None:intergenic 25.0%
! CTCAATTACCAAAATCTAAA+GGG - chr1.1:2146515-2146534 None:intergenic 25.0%
! GAAATAATCATCTTCCATAA+AGG + chr1.1:2143239-2143258 MS.gene24290:intron 25.0%
! GATAAGGATTAATAGCAAAA+GGG - chr1.1:2144759-2144778 None:intergenic 25.0%
! TAAAGTGATAGAATTCATAC+CGG - chr1.1:2145456-2145475 None:intergenic 25.0%
! TATGCAATGTATGTAGTATT+TGG - chr1.1:2146407-2146426 None:intergenic 25.0%
! TCTCAATTACCAAAATCTAA+AGG - chr1.1:2146516-2146535 None:intergenic 25.0%
! TGATGTTGTGATATATGTTT+CGG - chr1.1:2144032-2144051 None:intergenic 25.0%
! TGTGAAAAATCACAAGTTAA+TGG - chr1.1:2146085-2146104 None:intergenic 25.0%
! TTCAATCATCATTCAAAATC+GGG - chr1.1:2143762-2143781 None:intergenic 25.0%
! TTTAGATAACCTAGTTAGAT+TGG - chr1.1:2143976-2143995 None:intergenic 25.0%
!! GTATTAAGTTGTGCATTATT+CGG + chr1.1:2146430-2146449 MS.gene24290:intron 25.0%
!! TTCTTTGTTTCATTAAGTTG+AGG + chr1.1:2142815-2142834 MS.gene24290:intron 25.0%
!! TTGTTTATCCCTTTAGATTT+TGG + chr1.1:2146504-2146523 MS.gene24290:intron 25.0%
!!! AAATATTTATTTTCAGCCGT+TGG + chr1.1:2143100-2143119 MS.gene24290:intron 25.0%
!!! GAAGATGATTATTTCTACAA+GGG - chr1.1:2143234-2143253 None:intergenic 25.0%
!!! TAAATATTTTTACTCTCCCA+CGG - chr1.1:2143089-2143108 None:intergenic 25.0%
AACAAAGCGGAATTCTTAAA+CGG + chr1.1:2145693-2145712 MS.gene24290:intron 30.0%
AGTATGAATCTGAACTTTAC+TGG - chr1.1:2143483-2143502 None:intergenic 30.0%
ATGAAAATGATGATACTTGG+TGG - chr1.1:2145547-2145566 None:intergenic 30.0%
CAAATTTGGATTATGCTTGT+GGG + chr1.1:2145945-2145964 MS.gene24290:CDS 30.0%
CGTATAATAGTAACATAGCA+TGG + chr1.1:2145882-2145901 MS.gene24290:CDS 30.0%
GATTAATGATTGCAAAATGC+TGG - chr1.1:2145727-2145746 None:intergenic 30.0%
GGATAAGGATTAATAGCAAA+AGG - chr1.1:2144760-2144779 None:intergenic 30.0%
GGTATGAAAATGATGATACT+TGG - chr1.1:2145550-2145569 None:intergenic 30.0%
TGCATAGTGTTTATAGTCTT+CGG + chr1.1:2143828-2143847 MS.gene24290:intron 30.0%
TGGTAAAATTAGGGTTTCTA+CGG + chr1.1:2144621-2144640 MS.gene24290:CDS 30.0%
TGTAACTGAGATTGTAAGAA+GGG - chr1.1:2142749-2142768 None:intergenic 30.0%
TTATAAAAGTGATCCTGGAA+GGG + chr1.1:2144789-2144808 MS.gene24290:CDS 30.0%
TTATTGTCAAATTACCCTAC+TGG + chr1.1:2143451-2143470 MS.gene24290:intron 30.0%
TTCTTTCCAGAAATCTTCAA+CGG - chr1.1:2143267-2143286 None:intergenic 30.0%
TTGAATTTGATTGAAGACTC+CGG + chr1.1:2145617-2145636 MS.gene24290:intron 30.0%
TTTCTCAGATATCGTAAGAT+AGG - chr1.1:2146177-2146196 None:intergenic 30.0%
TTTGCTTATAAAAGTGATCC+TGG + chr1.1:2144784-2144803 MS.gene24290:CDS 30.0%
! ACTAGATTCTATGGGTTTTA+AGG + chr1.1:2145113-2145132 MS.gene24290:CDS 30.0%
! ATTATTCGGCAAAAGTTGAT+TGG + chr1.1:2146444-2146463 MS.gene24290:intron 30.0%
! GTTGATGAATGAGCAATAAA+GGG - chr1.1:2143351-2143370 None:intergenic 30.0%
! TACTATGCACAGTTGATTTA+TGG - chr1.1:2146245-2146264 None:intergenic 30.0%
! TTAGATCCATGTTTCTGATA+AGG + chr1.1:2143563-2143582 MS.gene24290:intron 30.0%
! TTCTCTTGGTGGTAAAATTA+GGG + chr1.1:2144612-2144631 MS.gene24290:CDS 30.0%
! TTGTCGTTTAATAAGGATAC+TGG + chr1.1:2144730-2144749 MS.gene24290:CDS 30.0%
! TTTAAGAATTCCGCTTTGTT+TGG - chr1.1:2145693-2145712 None:intergenic 30.0%
!! AGTTGATGAATGAGCAATAA+AGG - chr1.1:2143352-2143371 None:intergenic 30.0%
!! CATCCTAGTTTTCAATGAAT+TGG - chr1.1:2144115-2144134 None:intergenic 30.0%
!! CTAGTTTTTGATATTGAGAG+AGG - chr1.1:2143861-2143880 None:intergenic 30.0%
!! GATTTTGGTAATTGAGAATG+TGG + chr1.1:2146519-2146538 MS.gene24290:intron 30.0%
!! GGAAGATGATTATTTCTACA+AGG - chr1.1:2143235-2143254 None:intergenic 30.0%
!! TATATCCTTTAATTTTGCCC+AGG + chr1.1:2142865-2142884 MS.gene24290:intron 30.0%
!! TCAAAATTTTATGAGTGTCG+AGG + chr1.1:2144950-2144969 MS.gene24290:intron 30.0%
!!! GAAACAAGTGATTTTGACTT+TGG - chr1.1:2142798-2142817 None:intergenic 30.0%
AAATTAGGCAAAGTAAGACC+TGG - chr1.1:2142886-2142905 None:intergenic 35.0%
AAGTTCTACACCAAACAAAG+CGG + chr1.1:2145680-2145699 MS.gene24290:intron 35.0%
AATCTCTTCTATCACACTGT+TGG + chr1.1:2146052-2146071 MS.gene24290:CDS 35.0%
AATTAGGCAAAGTAAGACCT+GGG - chr1.1:2142885-2142904 None:intergenic 35.0%
ACATGGATCTAAACTTCAGA+TGG - chr1.1:2143555-2143574 None:intergenic 35.0%
AGATCTGCACTAGATTCTAT+GGG + chr1.1:2145105-2145124 MS.gene24290:CDS 35.0%
AGTGTGATAGAAGAGATTCA+TGG - chr1.1:2146050-2146069 None:intergenic 35.0%
ATAAAGGGCTACGATGATAA+TGG - chr1.1:2143336-2143355 None:intergenic 35.0%
ATCTCTTCTATCACACTGTT+GGG + chr1.1:2146053-2146072 MS.gene24290:CDS 35.0%
CATGAATATGTTTGATGCTC+AGG + chr1.1:2144882-2144901 MS.gene24290:CDS 35.0%
CTTATAAAAGTGATCCTGGA+AGG + chr1.1:2144788-2144807 MS.gene24290:CDS 35.0%
GCAAATTTGGATTATGCTTG+TGG + chr1.1:2145944-2145963 MS.gene24290:CDS 35.0%
GCATAGTGTTTATAGTCTTC+GGG + chr1.1:2143829-2143848 MS.gene24290:intron 35.0%
GGACCAATTCATTGAAAACT+AGG + chr1.1:2144109-2144128 MS.gene24290:intron 35.0%
GTGTAACTGAGATTGTAAGA+AGG - chr1.1:2142750-2142769 None:intergenic 35.0%
TAAGACCTGGGCAAAATTAA+AGG - chr1.1:2142873-2142892 None:intergenic 35.0%
TAGAACAGTTTCAAGATGAG+AGG - chr1.1:2145571-2145590 None:intergenic 35.0%
TAGATCTGCACTAGATTCTA+TGG + chr1.1:2145104-2145123 MS.gene24290:CDS 35.0%
TGGCACGAGCAAATAAATTT+AGG - chr1.1:2143929-2143948 None:intergenic 35.0%
TGTGCAACTACAAGCAAATT+TGG + chr1.1:2145931-2145950 MS.gene24290:CDS 35.0%
TTACTATTATACGGCGTTGT+TGG - chr1.1:2145875-2145894 None:intergenic 35.0%
TTCGAAAAAGTCCGACTATA+CGG + chr1.1:2144328-2144347 MS.gene24290:CDS 35.0%
! AATGGCGACAAAGATGTTTT+TGG - chr1.1:2143318-2143337 None:intergenic 35.0%
! ACATCAGTTAATCCTGCTTT+TGG - chr1.1:2145914-2145933 None:intergenic 35.0%
! ATAACCTAGTTAGATTGGCT+CGG - chr1.1:2143971-2143990 None:intergenic 35.0%
! CTTCTCTTGGTGGTAAAATT+AGG + chr1.1:2144611-2144630 MS.gene24290:CDS 35.0%
! GAATATAGTACCGTTTTGCA+GGG + chr1.1:2144703-2144722 MS.gene24290:CDS 35.0%
! TATTTCTACAAGGGTGGATT+TGG - chr1.1:2143225-2143244 None:intergenic 35.0%
! TGAATATAGTACCGTTTTGC+AGG + chr1.1:2144702-2144721 MS.gene24290:CDS 35.0%
! TTTTGCATGTTCTGTATAGC+TGG - chr1.1:2144577-2144596 None:intergenic 35.0%
!! AAAGTTGATTGGTTCTGACT+TGG + chr1.1:2146455-2146474 MS.gene24290:intron 35.0%
!! ACTTTTGGCGTTGAATTCAT+AGG - chr1.1:2145845-2145864 None:intergenic 35.0%
!! CTTTGTTTGGTGTAGAACTT+GGG - chr1.1:2145680-2145699 None:intergenic 35.0%
!! GATGATTATTTCTACAAGGG+TGG - chr1.1:2143231-2143250 None:intergenic 35.0%
!! GGGTTTGTTGTCGTTTAATA+AGG + chr1.1:2144723-2144742 MS.gene24290:CDS 35.0%
!! TTTACTGGAAAGTACCAGTA+GGG - chr1.1:2143468-2143487 None:intergenic 35.0%
!!! GATGTCGGTTTTGAAAAACT+CGG + chr1.1:2144651-2144670 MS.gene24290:CDS 35.0%
AAACCGCATGAGAACTTACT+TGG - chr1.1:2146133-2146152 None:intergenic 40.0%
AACCCAAGTAAGTTCTCATG+CGG + chr1.1:2146127-2146146 MS.gene24290:intron 40.0%
AACCGCATGAGAACTTACTT+GGG - chr1.1:2146132-2146151 None:intergenic 40.0%
AATCTTCAACGGTGCCTTTA+TGG - chr1.1:2143256-2143275 None:intergenic 40.0%
AATTCATACCGGAGATACCA+CGG - chr1.1:2145445-2145464 None:intergenic 40.0%
ACCGGAATCGGAATTGTAAT+CGG + chr1.1:2144385-2144404 MS.gene24290:CDS 40.0%
AGATTGTAAGAAGGGTTGTG+AGG - chr1.1:2142741-2142760 None:intergenic 40.0%
AGTATTTGCATCAACTCGAC+CGG - chr1.1:2144851-2144870 None:intergenic 40.0%
CATAGTTTACTCCGAGGAAT+GGG - chr1.1:2144246-2144265 None:intergenic 40.0%
CATCTTTGCCTTGTATGATG+AGG + chr1.1:2145299-2145318 MS.gene24290:CDS 40.0%
CATGAGCTTTCACTATCCAA+CGG - chr1.1:2143119-2143138 None:intergenic 40.0%
CTTCAAGTCCTCATCATACA+AGG - chr1.1:2145310-2145329 None:intergenic 40.0%
GAGAATGCAAAGGCTTACAA+TGG + chr1.1:2145207-2145226 MS.gene24290:CDS 40.0%
GATTGTAGCTTAATCCAACC+AGG + chr1.1:2145977-2145996 MS.gene24290:CDS 40.0%
GCCTTTGCATTCTCAATACT+CGG - chr1.1:2145201-2145220 None:intergenic 40.0%
GGATGTTGAGATTGTAGTTG+CGG + chr1.1:2145134-2145153 MS.gene24290:CDS 40.0%
TACTTTATCCTTCGTGTGCA+TGG + chr1.1:2144974-2144993 MS.gene24290:intron 40.0%
TCATGAAAACTTCCAGCAGA+AGG - chr1.1:2144682-2144701 None:intergenic 40.0%
TCCGATTACAATTCCGATTC+CGG - chr1.1:2144389-2144408 None:intergenic 40.0%
TCGTCGTTATCTCCATTGTA+AGG - chr1.1:2145171-2145190 None:intergenic 40.0%
TGTGAATTAAAACTGGGCCA+AGG + chr1.1:2143033-2143052 MS.gene24290:intron 40.0%
TGTGAGGAAACTTACTTGCA+AGG - chr1.1:2142725-2142744 None:intergenic 40.0%
TGTTTATAGTCTTCGGGTCA+AGG + chr1.1:2143835-2143854 MS.gene24290:intron 40.0%
TTACAATGGAGATAACGACG+AGG + chr1.1:2145170-2145189 MS.gene24290:CDS 40.0%
TTCTACGGTTCATACGATGT+CGG + chr1.1:2144636-2144655 MS.gene24290:CDS 40.0%
TTCTCTATTCTCTCTCCTCT+TGG + chr1.1:2143188-2143207 MS.gene24290:intron 40.0%
TTGGACAAGAAAGAACCAAG+AGG - chr1.1:2143206-2143225 None:intergenic 40.0%
! ACTGGAGTTTTCGATACTTC+CGG - chr1.1:2145639-2145658 None:intergenic 40.0%
! CCATGTTTCTGATAAGGTGT+GGG + chr1.1:2143569-2143588 MS.gene24290:intron 40.0%
! GCATGGTTAGCTAATGTGTT+AGG - chr1.1:2146019-2146038 None:intergenic 40.0%
! GTTGTTGGACTTGGAACTTT+TGG - chr1.1:2145860-2145879 None:intergenic 40.0%
! TAGTGCTTTGTTGCTTAGAG+AGG - chr1.1:2145401-2145420 None:intergenic 40.0%
! TCCATGTTTCTGATAAGGTG+TGG + chr1.1:2143568-2143587 MS.gene24290:intron 40.0%
! TGATGATACTTGGTGGTTGA+AGG - chr1.1:2145540-2145559 None:intergenic 40.0%
! TTTTATCGTGTGTATCGTGC+AGG + chr1.1:2145071-2145090 MS.gene24290:intron 40.0%
!! ACCGAGTATTGAGAATGCAA+AGG + chr1.1:2145197-2145216 MS.gene24290:CDS 40.0%
!! CTTTACTGGAAAGTACCAGT+AGG - chr1.1:2143469-2143488 None:intergenic 40.0%
!! GATTTTGGCAATTGAGAGTG+TGG + chr1.1:2146589-2146608 MS.gene24290:intron 40.0%
!! GCTTTGTTTGGTGTAGAACT+TGG - chr1.1:2145681-2145700 None:intergenic 40.0%
!!! GTATAGTCGGACTTTTTCGA+AGG - chr1.1:2144329-2144348 None:intergenic 40.0%
!!! TGCCTTTTTCAACCTAATGC+CGG + chr1.1:2144829-2144848 MS.gene24290:CDS 40.0%
AACATCATCCTCATCACCGT+CGG + chr1.1:2144502-2144521 MS.gene24290:CDS 45.0%
AGATTGTAGTTGCGGAGACA+GGG + chr1.1:2145142-2145161 MS.gene24290:CDS 45.0%
ATCAGTGTTGTAAAGCCCGA+AGG - chr1.1:2145355-2145374 None:intergenic 45.0%
ATCCAAGTTTCGCCAAAACC+TGG + chr1.1:2144443-2144462 MS.gene24290:CDS 45.0%
ATTAAAACTGGGCCAAGGCT+AGG + chr1.1:2143038-2143057 MS.gene24290:intron 45.0%
ATTCATACCGGAGATACCAC+GGG - chr1.1:2145444-2145463 None:intergenic 45.0%
ATTGTAATCGGAGCCGCAAA+CGG + chr1.1:2144397-2144416 MS.gene24290:CDS 45.0%
CAAACGATGATCTATGACGC+TGG + chr1.1:2145375-2145394 MS.gene24290:CDS 45.0%
CCATAGTTTACTCCGAGGAA+TGG - chr1.1:2144247-2144266 None:intergenic 45.0%
CCATTCCTCGGAGTAAACTA+TGG + chr1.1:2144244-2144263 MS.gene24290:CDS 45.0%
CCCACACCTTATCAGAAACA+TGG - chr1.1:2143572-2143591 None:intergenic 45.0%
CGACAACAAACCCTGCAAAA+CGG - chr1.1:2144716-2144735 None:intergenic 45.0%
CTTGATAAGTCTCTCACCGT+GGG + chr1.1:2143070-2143089 MS.gene24290:intron 45.0%
CTTGATGAAGCTTCTCTTGG+TGG + chr1.1:2144601-2144620 MS.gene24290:CDS 45.0%
GATTAAGCACCTGCGATCTA+AGG + chr1.1:2145236-2145255 MS.gene24290:CDS 45.0%
GTTGGCGAGGGATTTGATTA+TGG - chr1.1:2144365-2144384 None:intergenic 45.0%
GTTTCTGATAAGGTGTGGGA+GGG + chr1.1:2143573-2143592 MS.gene24290:intron 45.0%
TACAATTCCGATTCCGGTGT+TGG - chr1.1:2144383-2144402 None:intergenic 45.0%
TATGATGAGGACTTGAAGCC+TGG + chr1.1:2145312-2145331 MS.gene24290:CDS 45.0%
TCCTGGAAGGGCTGATAATT+TGG + chr1.1:2144801-2144820 MS.gene24290:CDS 45.0%
TGAAAACTTCCAGCAGAAGG+TGG - chr1.1:2144679-2144698 None:intergenic 45.0%
TGTAGCTTAATCCAACCAGG+AGG + chr1.1:2145980-2145999 MS.gene24290:CDS 45.0%
TTAAAACTGGGCCAAGGCTA+GGG + chr1.1:2143039-2143058 MS.gene24290:intron 45.0%
TTATACGGCGTTGTTGGACT+TGG - chr1.1:2145869-2145888 None:intergenic 45.0%
TTGGATTATGCTTGTGGGCA+GGG + chr1.1:2145950-2145969 MS.gene24290:CDS 45.0%
TTTGGATTATGCTTGTGGGC+AGG + chr1.1:2145949-2145968 MS.gene24290:CDS 45.0%
! ACTTGGTGGTTGAAGGTTCA+TGG - chr1.1:2145533-2145552 None:intergenic 45.0%
! GGATTTGATTATGGCGGGAT+CGG - chr1.1:2144356-2144375 None:intergenic 45.0%
! TGTTTCTGATAAGGTGTGGG+AGG + chr1.1:2143572-2143591 MS.gene24290:intron 45.0%
!! AAGGCACCGTTGAAGATTTC+TGG + chr1.1:2143258-2143277 MS.gene24290:intron 45.0%
!! ATCCAGGTTTTGGCGAAACT+TGG - chr1.1:2144448-2144467 None:intergenic 45.0%
!! GACCGGCATTAGGTTGAAAA+AGG - chr1.1:2144834-2144853 None:intergenic 45.0%
!! GGTTTTGGCGAAACTTGGAT+CGG - chr1.1:2144443-2144462 None:intergenic 45.0%
!! GTTGGTGGAAATCCAGGTTT+TGG - chr1.1:2144458-2144477 None:intergenic 45.0%
!! TAAGTGTCCACTGATTTCCC+TGG - chr1.1:2145279-2145298 None:intergenic 45.0%
!!! CAGTTTTAAGGCGCCTTCTA+GGG - chr1.1:2143660-2143679 None:intergenic 45.0%
!!! TAGTCGGACTTTTTCGAAGG+CGG - chr1.1:2144326-2144345 None:intergenic 45.0%
!!! TCAGTTTTAAGGCGCCTTCT+AGG - chr1.1:2143661-2143680 None:intergenic 45.0%
!!! TATTTGATAATATATATAAT+GGG + chr1.1:2143526-2143545 MS.gene24290:intron 5.0%
AATGGAGATAACGACGAGGC+TGG + chr1.1:2145174-2145193 MS.gene24290:CDS 50.0%
ACTGATGCCAGGGAAATCAG+TGG + chr1.1:2145269-2145288 MS.gene24290:CDS 50.0%
ACTTGACTCCATGCACACGA+AGG - chr1.1:2144985-2145004 None:intergenic 50.0%
AGTGATGACTTCGTTGCCGA+CGG - chr1.1:2144521-2144540 None:intergenic 50.0%
ATAGTAAGGGAGGACGTTGG+TGG - chr1.1:2144473-2144492 None:intergenic 50.0%
ATCAAATCCCTCGCCAACAC+CGG + chr1.1:2144367-2144386 MS.gene24290:CDS 50.0%
ATGAGGATGATGTTGCTGGC+GGG - chr1.1:2144496-2144515 None:intergenic 50.0%
ATGTTGCTGGCGGGATAGTA+AGG - chr1.1:2144487-2144506 None:intergenic 50.0%
CAAAACAAGCACCTCCTGGT+TGG - chr1.1:2145994-2146013 None:intergenic 50.0%
CTAGGGTGGGAGAGCTTAAT+AGG - chr1.1:2143643-2143662 None:intergenic 50.0%
CTTAATAGGTCTCCCACCGT+GGG - chr1.1:2143629-2143648 None:intergenic 50.0%
CTTGGCCATAGTTTACTCCG+AGG - chr1.1:2144252-2144271 None:intergenic 50.0%
GAAACTTGGATCGGAAGCGA+GGG - chr1.1:2144434-2144453 None:intergenic 50.0%
GAGATTGTAGTTGCGGAGAC+AGG + chr1.1:2145141-2145160 MS.gene24290:CDS 50.0%
GATGAGGATGATGTTGCTGG+CGG - chr1.1:2144497-2144516 None:intergenic 50.0%
GATTCATGGCGTATGCAGCA+TGG - chr1.1:2146036-2146055 None:intergenic 50.0%
GCAGAATCTGACCCATTCCT+CGG + chr1.1:2144232-2144251 MS.gene24290:intron 50.0%
GCCAAATTATCAGCCCTTCC+AGG - chr1.1:2144805-2144824 None:intergenic 50.0%
GCGAGGGATTTGATTATGGC+GGG - chr1.1:2144361-2144380 None:intergenic 50.0%
GCGCTTGATGAAGCTTCTCT+TGG + chr1.1:2144598-2144617 MS.gene24290:CDS 50.0%
GCTTGATAAGTCTCTCACCG+TGG + chr1.1:2143069-2143088 MS.gene24290:intron 50.0%
GGCGAGGGATTTGATTATGG+CGG - chr1.1:2144362-2144381 None:intergenic 50.0%
GGTGATGAGGATGATGTTGC+TGG - chr1.1:2144500-2144519 None:intergenic 50.0%
GGTTCAAAACAAGCACCTCC+TGG - chr1.1:2145998-2146017 None:intergenic 50.0%
TATCGTGTGTATCGTGCAGG+TGG + chr1.1:2145074-2145093 MS.gene24290:intron 50.0%
TGGATTATGCTTGTGGGCAG+GGG + chr1.1:2145951-2145970 MS.gene24290:CDS 50.0%
TGTTGCTGGCGGGATAGTAA+GGG - chr1.1:2144486-2144505 None:intergenic 50.0%
TTAAGCTCTCCCACCCTAGA+AGG + chr1.1:2143644-2143663 MS.gene24290:intron 50.0%
TTCATACCGGAGATACCACG+GGG - chr1.1:2145443-2145462 None:intergenic 50.0%
! AAGCACCTGCGATCTAAGGT+TGG + chr1.1:2145240-2145259 MS.gene24290:CDS 50.0%
! ACTGATTTCCCTGGCATCAG+TGG - chr1.1:2145270-2145289 None:intergenic 50.0%
! AGCACCTGCGATCTAAGGTT+GGG + chr1.1:2145241-2145260 MS.gene24290:CDS 50.0%
!! ACCTAGTTAGATTGGCTCGG+TGG - chr1.1:2143968-2143987 None:intergenic 50.0%
!! CCTAGTTAGATTGGCTCGGT+GGG - chr1.1:2143967-2143986 None:intergenic 50.0%
!! CTGGTTCTGAGAAAGCCTTC+GGG + chr1.1:2145337-2145356 MS.gene24290:CDS 50.0%
!! CTTTTTCACTCACCCACGGT+GGG + chr1.1:2143614-2143633 MS.gene24290:intron 50.0%
!! GCTGGTTCTGAGAAAGCCTT+CGG + chr1.1:2145336-2145355 MS.gene24290:CDS 50.0%
!! GGTGGTTTGGAGGAGTTTTG+CGG - chr1.1:2144305-2144324 None:intergenic 50.0%
!! GTGGGATTGGTTTGAGAGCT+TGG - chr1.1:2143949-2143968 None:intergenic 50.0%
!! TTAGATTGGCTCGGTGGGAT+TGG - chr1.1:2143962-2143981 None:intergenic 50.0%
!! TTTAAGGCGCCTTCTAGGGT+GGG - chr1.1:2143656-2143675 None:intergenic 50.0%
!!! CTTTTTCGAAGGCGGTGGTT+TGG - chr1.1:2144318-2144337 None:intergenic 50.0%
!!! GCTGCTTTTTCACTCACCCA+CGG + chr1.1:2143610-2143629 MS.gene24290:intron 50.0%
!!! TTTTAAGGCGCCTTCTAGGG+TGG - chr1.1:2143657-2143676 None:intergenic 50.0%
ACGGGGCTACTAGTAGGTGT+AGG - chr1.1:2145426-2145445 None:intergenic 55.0%
CCAGTGATTCCAGCACCAAC+AGG + chr1.1:2145654-2145673 MS.gene24290:intron 55.0%
CCCACCGAGCCAATCTAACT+AGG + chr1.1:2143964-2143983 MS.gene24290:intron 55.0%
CGAAACTTGGATCGGAAGCG+AGG - chr1.1:2144435-2144454 None:intergenic 55.0%
GATACCACGGGGCTACTAGT+AGG - chr1.1:2145432-2145451 None:intergenic 55.0%
GCATCAACTCGACCGGCATT+AGG - chr1.1:2144844-2144863 None:intergenic 55.0%
GCATGGTGTGTGCCAAAAGC+AGG + chr1.1:2145899-2145918 MS.gene24290:CDS 55.0%
GCTTAATAGGTCTCCCACCG+TGG - chr1.1:2143630-2143649 None:intergenic 55.0%
GCTTTCTCAGAACCAGCTCC+AGG - chr1.1:2145333-2145352 None:intergenic 55.0%
GGATGCTGGTGGAAGGTTGT+CGG - chr1.1:2144278-2144297 None:intergenic 55.0%
GGGATAGTAAGGGAGGACGT+TGG - chr1.1:2144476-2144495 None:intergenic 55.0%
GGTGTAGAACTTGGGCCTGT+TGG - chr1.1:2145672-2145691 None:intergenic 55.0%
GTGTCCCAACCTTAGATCGC+AGG - chr1.1:2145248-2145267 None:intergenic 55.0%
TACACCTACTAGTAGCCCCG+TGG + chr1.1:2145425-2145444 MS.gene24290:CDS 55.0%
TAGTAGCCCCGTGGTATCTC+CGG + chr1.1:2145434-2145453 MS.gene24290:CDS 55.0%
TTGGGACACCACTGATGCCA+GGG + chr1.1:2145259-2145278 MS.gene24290:CDS 55.0%
TTGTAGTTGCGGAGACAGGG+TGG + chr1.1:2145145-2145164 MS.gene24290:CDS 55.0%
! CGGGATCGGTTCCGTATAGT+CGG - chr1.1:2144342-2144361 None:intergenic 55.0%
! GAGACAGGGTGGCCTTACAA+TGG + chr1.1:2145156-2145175 MS.gene24290:CDS 55.0%
! GAGGACGTTGGTGGAAATCC+AGG - chr1.1:2144464-2144483 None:intergenic 55.0%
! GGTTTGGAGGAGTTTTGCGG+TGG - chr1.1:2144302-2144321 None:intergenic 55.0%
! TTGGAGGAGTTTTGCGGTGG+CGG - chr1.1:2144299-2144318 None:intergenic 55.0%
! TTTCGAAGGCGGTGGTTTGG+AGG - chr1.1:2144315-2144334 None:intergenic 55.0%
!! CCTGTTGGTGCTGGAATCAC+TGG - chr1.1:2145657-2145676 None:intergenic 55.0%
!!! GCTTTTTCACTCACCCACGG+TGG + chr1.1:2143613-2143632 MS.gene24290:intron 55.0%
!!! TCGGACTTTTTCGAAGGCGG+TGG - chr1.1:2144323-2144342 None:intergenic 55.0%
AAACTGGGCCAAGGCTAGGG+TGG + chr1.1:2143042-2143061 MS.gene24290:intron 60.0%
AACTCGGAGCCACCTTCTGC+TGG + chr1.1:2144667-2144686 MS.gene24290:CDS 60.0%
AACTGGGCCAAGGCTAGGGT+GGG + chr1.1:2143043-2143062 MS.gene24290:intron 60.0%
AAGCTCTCCCACCCTAGCCT+TGG - chr1.1:2143053-2143072 None:intergenic 60.0%
ACTTGGATCGGAAGCGAGGG+AGG - chr1.1:2144431-2144450 None:intergenic 60.0%
CTTCGTTGCCGACGGTGATG+AGG - chr1.1:2144513-2144532 None:intergenic 60.0%
CTTGGATCGGAAGCGAGGGA+GGG - chr1.1:2144430-2144449 None:intergenic 60.0%
GAACTTGGGCCTGTTGGTGC+TGG - chr1.1:2145666-2145685 None:intergenic 60.0%
GAGGACTTGAAGCCTGGAGC+TGG + chr1.1:2145318-2145337 MS.gene24290:CDS 60.0%
GTGGAAGGTTGTCGGCGACT+TGG - chr1.1:2144270-2144289 None:intergenic 60.0%
GTTGGGACACCACTGATGCC+AGG + chr1.1:2145258-2145277 MS.gene24290:CDS 60.0%
TCCCTCGCCAACACCGGAAT+CGG + chr1.1:2144373-2144392 MS.gene24290:CDS 60.0%
TGCTGGCGGGATAGTAAGGG+AGG - chr1.1:2144483-2144502 None:intergenic 60.0%
! GGAGGGTATGTCGCCGTTTG+CGG - chr1.1:2144413-2144432 None:intergenic 60.0%
!! TCCGATTCCGGTGTTGGCGA+GGG - chr1.1:2144377-2144396 None:intergenic 60.0%
!! TTCCGATTCCGGTGTTGGCG+AGG - chr1.1:2144378-2144397 None:intergenic 60.0%
!!! AGTTTTGCGGTGGCGGATGC+TGG - chr1.1:2144292-2144311 None:intergenic 60.0%
!! TTTGCGGTGGCGGATGCTGG+TGG - chr1.1:2144289-2144308 None:intergenic 65.0%
!! CGGTGGCGGATGCTGGTGGA+AGG - chr1.1:2144285-2144304 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 2142675 2146744 2142675 ID=MS.gene24290
chr1.1 mRNA 2142675 2146744 2142675 ID=MS.gene24290.t1;Parent=MS.gene24290
chr1.1 exon 2142675 2142729 2142675 ID=MS.gene24290.t1.exon1;Parent=MS.gene24290.t1
chr1.1 CDS 2142675 2142729 2142675 ID=cds.MS.gene24290.t1;Parent=MS.gene24290.t1
chr1.1 exon 2144236 2144903 2144236 ID=MS.gene24290.t1.exon2;Parent=MS.gene24290.t1
chr1.1 CDS 2144236 2144903 2144236 ID=cds.MS.gene24290.t1;Parent=MS.gene24290.t1
chr1.1 exon 2145093 2145455 2145093 ID=MS.gene24290.t1.exon3;Parent=MS.gene24290.t1
chr1.1 CDS 2145093 2145455 2145093 ID=cds.MS.gene24290.t1;Parent=MS.gene24290.t1
chr1.1 exon 2145818 2146133 2145818 ID=MS.gene24290.t1.exon4;Parent=MS.gene24290.t1
chr1.1 CDS 2145818 2146133 2145818 ID=cds.MS.gene24290.t1;Parent=MS.gene24290.t1
chr1.1 exon 2146707 2146744 2146707 ID=MS.gene24290.t1.exon5;Parent=MS.gene24290.t1
chr1.1 CDS 2146707 2146744 2146707 ID=cds.MS.gene24290.t1;Parent=MS.gene24290.t1
Gene Sequence

>MS.gene24290

ATGACAAGAATGGTTTCTGGCTTTCTTCTACTCTTTCTCGCATTCAACCTTGCAAGTAAGTTTCCTCACAACCCTTCTTACAATCTCAGTTACACTTACACATGAAGCTTTTGTCTTACTCCAAAGTCAAAATCACTTGTTTCTTTGTTTCATTAAGTTGAGGAAACGAAGACAAATATTAAATTATTGATATATCCTTTAATTTTGCCCAGGTCTTACTTTGCCTAATTTTTGATGATGTTTTAACCGCTAGCATTTTTCATTTGTTTACTTTTACAGCTCTATTTAATCTGTTCTTAACGGAAAAAGTAAAGTGAAGTTTCTATTTTTGTTTAAAATAGTCCATAATCTCTAATTTTGTGAATTAAAACTGGGCCAAGGCTAGGGTGGGAGAGCTTGATAAGTCTCTCACCGTGGGAGAGTAAAAATATTTATTTTCAGCCGTTGGATAGTGAAAGCTCATGATTACTATCATACTCTAACAACTCTAAATACATTTTATTTCATCTCACGTTCTCTATTCTCTCTCCTCTTGGTTCTTTCTTGTCCAAATCCACCCTTGTAGAAATAATCATCTTCCATAAAGGCACCGTTGAAGATTTCTGGAAAGAATCATTATGCTATCAGCTAAGAAACAAATCCAAAAACATCTTTGTCGCCATTATCATCGTAGCCCTTTATTGCTCATTCATCAACTGAAGTTGTTTAATTGAATTTTAAACATTTCTTATTCTAACTATGGAAATTTCTTTGAACATTTCAATTGAATTTGAAACTTATTGTCAAATTACCCTACTGGTACTTTCCAGTAAAGTTCAGATTCATACTTCTCTTGAAGAAACAATTTTGCCTATTTGATAATATATATAATGGGTATCCATCTGAAGTTTAGATCCATGTTTCTGATAAGGTGTGGGAGGGTGTACGATGCACTTGCTGCTTTTTCACTCACCCACGGTGGGAGACCTATTAAGCTCTCCCACCCTAGAAGGCGCCTTAAAACTGAGCTTATAATTACAAGAGAGTTGCTTGATAAAAAAAAAATCAAAAGTTATGTGTGAATGATTTGAATCGTTACAAAGAACCCGATTTTGAATGATGATTGAATGATCATTTATAAAATTTCATTTACTTTTTTTTGACAAAGTCAAATTGCATAGTGTTTATAGTCTTCGGGTCAAGGCCTCTCTCAATATCAAAAACTAGAGAATTAAAAAAAAAAACTGGCTTAATTTTGAAACTTTTTAAACTCCTAAATTTATTTGCTCGTGCCAAGCTCTCAAACCAATCCCACCGAGCCAATCTAACTAGGTTATCTAAATTACTATATATCAATTTGTATGTCATATATCATCCGAAACATATATCACAACATCATTTTTTAGCTTAAGAATTTTTAGAAATTGACGAAAAATAGAAGAATTTTTAAGTAGAGGACCAATTCATTGAAAACTAGGATGCAAAAATATAATTAAACAAAAAATTTACTTCAGAAAGTTAATTTTTTAAATTACTAACGTAATTTTTTTTAAAAATTTACACAGTTTATTGTTGTGTGCAGAATCTGACCCATTCCTCGGAGTAAACTATGGCCAAGTCGCCGACAACCTTCCACCAGCATCCGCCACCGCAAAACTCCTCCAAACCACCGCCTTCGAAAAAGTCCGACTATACGGAACCGATCCCGCCATAATCAAATCCCTCGCCAACACCGGAATCGGAATTGTAATCGGAGCCGCAAACGGCGACATACCCTCCCTCGCTTCCGATCCAAGTTTCGCCAAAACCTGGATTTCCACCAACGTCCTCCCTTACTATCCCGCCAGCAACATCATCCTCATCACCGTCGGCAACGAAGTCATCACTTCAAATGATACAAATCTTATTAACGGAATGTTACCAGCTATACAGAACATGCAAAAAGCGCTTGATGAAGCTTCTCTTGGTGGTAAAATTAGGGTTTCTACGGTTCATACGATGTCGGTTTTGAAAAACTCGGAGCCACCTTCTGCTGGAAGTTTTCATGATGAATATAGTACCGTTTTGCAGGGTTTGTTGTCGTTTAATAAGGATACTGGTTCCCCTTTTGCTATTAATCCTTATCCTTATTTTGCTTATAAAAGTGATCCTGGAAGGGCTGATAATTTGGCTTTTTGCCTTTTTCAACCTAATGCCGGTCGAGTTGATGCAAATACTAAGCTCAATTACATGAATATGTTTGATGCTCAGGTTAGTCCAAATATCAATTCTGATTACATTCAATTATGTCATTTTCTCAAAATTTTATGAGTGTCGAGGTTACTTTATCCTTCGTGTGCATGGAGTCAAGTAATATAACTCTTATATTTGAGCGAGTGAAAAAGTTATGTGTTAGCTTTGAAGTCTAAAGTGCATGTTTTTATCGTGTGTATCGTGCAGGTGGATGCTGTTAGATCTGCACTAGATTCTATGGGTTTTAAGGATGTTGAGATTGTAGTTGCGGAGACAGGGTGGCCTTACAATGGAGATAACGACGAGGCTGGACCGAGTATTGAGAATGCAAAGGCTTACAATGGTAATCTGATTAAGCACCTGCGATCTAAGGTTGGGACACCACTGATGCCAGGGAAATCAGTGGACACTTACATCTTTGCCTTGTATGATGAGGACTTGAAGCCTGGAGCTGGTTCTGAGAAAGCCTTCGGGCTTTACAACACTGATCAAACGATGATCTATGACGCTGGCCTCTCTAAGCAACAAAGCACTACTCCTACACCTACTAGTAGCCCCGTGGTATCTCCGGTATGAATTCTATCACTTTATTACATTATTACATCATCATTCATTAAATATCATCATTGATTAATGAGCATAAACCATGAACCTTCAACCACCAAGTATCATCATTTTCATACCTCTCATCTTGAAACTGTTCTAGAGTACTTGCTCTTAACTATGTATTTTTGAATTTGATTGAAGACTCCGGAAGTATCGAAAACTCCAGTGATTCCAGCACCAACAGGCCCAAGTTCTACACCAAACAAAGCGGAATTCTTAAACGGACATGAAGCCAGCATTTTGCAATCATTAATCATGCTCACATATCTTATCTTAATGTTGTTCTAGTAGTGTATAACATTTTGTAATTCTGAATTTTATTGAAGATTAATCAAGATGTGTCAAAATCTCCTATGAATTCAACGCCAAAAGTTCCAAGTCCAACAACGCCGTATAATAGTAACATAGCATGGTGTGTGCCAAAAGCAGGATTAACTGATGTGCAACTACAAGCAAATTTGGATTATGCTTGTGGGCAGGGGATTGATTGTAGCTTAATCCAACCAGGAGGTGCTTGTTTTGAACCTAACACATTAGCTAACCATGCTGCATACGCCATGAATCTCTTCTATCACACTGTTGGGCAAAATCCATTAACTTGTGATTTTTCACAAACAGCTACACTAACATCAAATAACCCAAGTAAGTTCTCATGCGGTTTTTGTACGACATTTTTTTTGTTCCTATCTTACGATATCTGAGAAATTCAAATTTTCTATAGTGAGAAATTCTCTAAAGCTATAATCTCAACCATAAATCAACTGTGCATAGTATGTGCAAGATTACAACAAATTATAAAATGTGTTTGAACAACAACATCAATTGATTTTCTTGTCAACAATCAATGTGTTTAAACAATACTATATTAGGGTCTTGTAGTTAATAACTGATTATTAGTGGGGAAAAACTTGTCCAAATACTACATACATTGCATAAAAGTATTAAGTTGTGCATTATTCGGCAAAAGTTGATTGGTTCTGACTTGGTACACCATTTTCTAATAACTTTTGTCTTGTTTATCCCTTTAGATTTTGGTAATTGAGAATGTGGAAGTGTTTTCTGAAAGTTATATGACTTTTGTCTTGTTTATCACTTTAGATTTTGGCAATTGAGAGTGTGGAAGATATGATTTTAAATTTCTAGACGATTGAACTACTTTGATTATTTTACTAAATTGAATGCTCGCTTTACAAATATACTTTGTTTATTTTGTAGGTTATAATAGTTGTATTTATACTGGAGGGAATGCATAA
Protein sequence

>MS.gene24290.t1

MTRMVSGFLLLFLAFNLAKSDPFLGVNYGQVADNLPPASATAKLLQTTAFEKVRLYGTDPAIIKSLANTGIGIVIGAANGDIPSLASDPSFAKTWISTNVLPYYPASNIILITVGNEVITSNDTNLINGMLPAIQNMQKALDEASLGGKIRVSTVHTMSVLKNSEPPSAGSFHDEYSTVLQGLLSFNKDTGSPFAINPYPYFAYKSDPGRADNLAFCLFQPNAGRVDANTKLNYMNMFDAQVDAVRSALDSMGFKDVEIVVAETGWPYNGDNDEAGPSIENAKAYNGNLIKHLRSKVGTPLMPGKSVDTYIFALYDEDLKPGAGSEKAFGLYNTDQTMIYDAGLSKQQSTTPTPTSSPVVSPINQDVSKSPMNSTPKVPSPTTPYNSNIAWCVPKAGLTDVQLQANLDYACGQGIDCSLIQPGGACFEPNTLANHAAYAMNLFYHTVGQNPLTCDFSQTATLTSNNPSYNSCIYTGGNA