Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24892.t1 | XP_013454728.1 | 99.5 | 396 | 2 | 0 | 1 | 396 | 1 | 396 | 2.00E-229 | 804.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24892.t1 | Q9C969 | 68.6 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 1.8e-167 | 590.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24892.t1 | A0A072UG88 | 99.5 | 396 | 2 | 0 | 1 | 396 | 1 | 396 | 1.4e-229 | 804.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40160 | MS.gene24892 | PPI |
| MS.gene24892 | MS.gene028573 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24892.t1 | MTR_4g011820 | 99.495 | 396 | 2 | 0 | 1 | 396 | 1 | 396 | 0.0 | 815 |
| MS.gene24892.t1 | MTR_7g106830 | 30.028 | 353 | 220 | 8 | 62 | 394 | 128 | 473 | 2.62e-42 | 154 |
| MS.gene24892.t1 | MTR_8g091280 | 29.661 | 354 | 220 | 10 | 62 | 394 | 130 | 475 | 5.78e-40 | 148 |
| MS.gene24892.t1 | MTR_1807s0010 | 27.507 | 349 | 220 | 9 | 62 | 388 | 62 | 399 | 3.31e-23 | 100 |
| MS.gene24892.t1 | MTR_3g072670 | 25.062 | 403 | 261 | 17 | 6 | 387 | 63 | 445 | 1.04e-20 | 94.0 |
| MS.gene24892.t1 | MTR_3g072680 | 25.185 | 405 | 258 | 17 | 6 | 387 | 20 | 402 | 1.45e-20 | 93.2 |
| MS.gene24892.t1 | MTR_1g087760 | 25.070 | 359 | 245 | 9 | 5 | 353 | 3 | 347 | 2.23e-20 | 92.4 |
| MS.gene24892.t1 | MTR_8g101750 | 22.059 | 340 | 220 | 12 | 75 | 382 | 97 | 423 | 2.33e-15 | 77.8 |
| MS.gene24892.t1 | MTR_2g008430 | 29.080 | 337 | 213 | 14 | 64 | 382 | 108 | 436 | 3.96e-15 | 77.0 |
| MS.gene24892.t1 | MTR_6g091760 | 23.512 | 336 | 220 | 12 | 75 | 382 | 105 | 431 | 6.38e-15 | 76.3 |
| MS.gene24892.t1 | MTR_8g098930 | 22.599 | 354 | 234 | 14 | 61 | 382 | 87 | 432 | 9.46e-15 | 76.3 |
| MS.gene24892.t1 | MTR_3g103550 | 22.727 | 352 | 231 | 12 | 64 | 382 | 81 | 424 | 1.56e-14 | 75.5 |
| MS.gene24892.t1 | MTR_4g092620 | 25.333 | 300 | 186 | 10 | 62 | 336 | 125 | 411 | 9.31e-13 | 69.7 |
| MS.gene24892.t1 | MTR_8g023140 | 25.073 | 343 | 197 | 16 | 64 | 357 | 154 | 485 | 3.96e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24892.t1 | AT1G80360 | 68.608 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 0.0 | 595 |
| MS.gene24892.t1 | AT1G80360 | 68.608 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 0.0 | 595 |
| MS.gene24892.t1 | AT1G80360 | 68.608 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 0.0 | 595 |
| MS.gene24892.t1 | AT1G80360 | 68.608 | 395 | 123 | 1 | 1 | 395 | 1 | 394 | 0.0 | 595 |
| MS.gene24892.t1 | AT2G22250 | 28.756 | 386 | 247 | 9 | 25 | 390 | 47 | 424 | 1.20e-42 | 154 |
| MS.gene24892.t1 | AT2G22250 | 28.756 | 386 | 247 | 9 | 25 | 390 | 94 | 471 | 3.62e-42 | 154 |
| MS.gene24892.t1 | AT2G22250 | 28.756 | 386 | 247 | 9 | 25 | 390 | 94 | 471 | 3.62e-42 | 154 |
| MS.gene24892.t1 | AT1G77670 | 23.383 | 402 | 273 | 14 | 6 | 389 | 56 | 440 | 1.62e-18 | 87.4 |
| MS.gene24892.t1 | AT2G13810 | 25.485 | 361 | 213 | 13 | 64 | 391 | 108 | 445 | 1.22e-15 | 78.6 |
| MS.gene24892.t1 | AT4G33680 | 27.445 | 317 | 180 | 11 | 51 | 336 | 116 | 413 | 9.95e-15 | 75.9 |
| MS.gene24892.t1 | AT4G11280 | 23.944 | 355 | 228 | 15 | 60 | 382 | 89 | 433 | 1.00e-14 | 76.3 |
| MS.gene24892.t1 | AT2G24850 | 23.894 | 339 | 230 | 11 | 64 | 382 | 87 | 417 | 3.72e-14 | 74.3 |
| MS.gene24892.t1 | AT1G72330 | 24.561 | 342 | 200 | 13 | 64 | 357 | 170 | 501 | 9.77e-13 | 70.1 |
| MS.gene24892.t1 | AT1G72330 | 27.615 | 239 | 132 | 9 | 155 | 357 | 281 | 514 | 1.57e-12 | 69.3 |
| MS.gene24892.t1 | AT4G26200 | 22.899 | 345 | 220 | 15 | 75 | 386 | 111 | 442 | 3.48e-12 | 68.2 |
| MS.gene24892.t1 | AT5G51690 | 22.599 | 354 | 245 | 12 | 60 | 388 | 21 | 370 | 4.17e-12 | 67.4 |
| MS.gene24892.t1 | AT5G51690 | 22.599 | 354 | 245 | 12 | 60 | 388 | 144 | 493 | 5.98e-12 | 67.4 |
| MS.gene24892.t1 | AT2G22810 | 22.727 | 330 | 217 | 11 | 83 | 382 | 105 | 426 | 9.39e-11 | 63.9 |
Find 113 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGGAGAAGGTTCTATTAA+AGG | 0.220827 | 4.1:+84127777 | MS.gene24892:CDS |
| GCATCTGGATAAAGTGTTTC+CGG | 0.228182 | 4.1:-84125318 | None:intergenic |
| TTCTTTACCTTAACCATAAT+AGG | 0.279146 | 4.1:-84123270 | None:intergenic |
| ACTCGTTCGGTAACCCATTC+AGG | 0.279683 | 4.1:-84127705 | None:intergenic |
| ACCTTATCCAATGCTTGCTT+TGG | 0.280175 | 4.1:-84124433 | None:intergenic |
| TGCACTCTACTCCTTAGAAT+TGG | 0.283839 | 4.1:+84127680 | MS.gene24892:CDS |
| CAGAGCAGCATTGGTGAAAA+AGG | 0.324208 | 4.1:+84124519 | MS.gene24892:CDS |
| AAAAGAAAGATGGGTTCTTA+TGG | 0.325486 | 4.1:+84123213 | None:intergenic |
| AGCTAAGAATGCTGTGTCTT+TGG | 0.329353 | 4.1:+84123401 | MS.gene24892:CDS |
| TTATCCAATGCTTGCTTTGG+AGG | 0.330963 | 4.1:-84124430 | None:intergenic |
| TAAGAAAGGTTTGGAAGAAT+TGG | 0.333107 | 4.1:+84127995 | MS.gene24892:CDS |
| GCAGCACCGCACGCACTTCC+AGG | 0.349728 | 4.1:-84127906 | None:intergenic |
| TTGTTCGCTGGCTAGCTAAT+AGG | 0.359579 | 4.1:+84127865 | MS.gene24892:CDS |
| TTTACAATAGTTACTAGCTT+CGG | 0.361088 | 4.1:-84126146 | None:intergenic |
| TTCTCTTTCTCGAAAGCATA+TGG | 0.362086 | 4.1:+84126801 | MS.gene24892:CDS |
| ACCAATGCTGCTCTGAGTTC+AGG | 0.364425 | 4.1:-84124511 | None:intergenic |
| TTTGCACAAATCCTCGGTTA+TGG | 0.370716 | 4.1:+84124997 | MS.gene24892:CDS |
| ATAAAGTGTTTCCGGGTTAC+CGG | 0.370893 | 4.1:-84125310 | None:intergenic |
| TATTGGTAATGCCAGTCATT+TGG | 0.376721 | 4.1:-84125275 | None:intergenic |
| GGAAACTGAGATGCCTATTA+TGG | 0.380670 | 4.1:+84123257 | MS.gene24892:CDS |
| CCATTCAGGTCCCAATTCTA+AGG | 0.385511 | 4.1:-84127691 | None:intergenic |
| GCATACCCTTCTGAAGTAGA+AGG | 0.386056 | 4.1:+84127588 | MS.gene24892:CDS |
| TGAGATGCCTATTATGGTTA+AGG | 0.394646 | 4.1:+84123263 | MS.gene24892:CDS |
| GAGAAGGAGCTATATACCTT+TGG | 0.395158 | 4.1:+84127802 | MS.gene24892:CDS |
| GTAAATCCTGGCAATCCAAC+TGG | 0.395490 | 4.1:+84126164 | MS.gene24892:CDS |
| GGAAGTGCGTGCGGTGCTGC+TGG | 0.401509 | 4.1:+84127909 | MS.gene24892:CDS |
| TTGGAGGCCCTTTCTTCTCT+CGG | 0.402434 | 4.1:+84127759 | MS.gene24892:CDS |
| GAATGCTGTGTCTTTGGCTC+AGG | 0.403806 | 4.1:+84123407 | MS.gene24892:CDS |
| CTTAGAATTGGGACCTGAAT+GGG | 0.407280 | 4.1:+84127692 | MS.gene24892:CDS |
| GAAATTATTGAAGCACAGAT+TGG | 0.414853 | 4.1:-84127648 | None:intergenic |
| GCAATGACTTTACCTGCATC+TGG | 0.415721 | 4.1:-84125333 | None:intergenic |
| CATCTGGATAAAGTGTTTCC+GGG | 0.418128 | 4.1:-84125317 | None:intergenic |
| TTACAATAGTTACTAGCTTC+GGG | 0.420849 | 4.1:-84126145 | None:intergenic |
| GGAATGATGGGATGGCGAAT+TGG | 0.421184 | 4.1:+84126822 | MS.gene24892:CDS |
| GGTTACAGCCGGTGCCAATC+AGG | 0.424776 | 4.1:+84125018 | MS.gene24892:CDS |
| ACCGGGACCAACTAGTATAT+TGG | 0.429326 | 4.1:-84125292 | None:intergenic |
| TAGGTTCCAGTTGGATTGCC+AGG | 0.430279 | 4.1:-84126170 | None:intergenic |
| GGAAATCTTAGAATCTCGTT+TGG | 0.435661 | 4.1:+84127930 | MS.gene24892:CDS |
| GCACTCTACTCCTTAGAATT+GGG | 0.437159 | 4.1:+84127681 | MS.gene24892:CDS |
| CTAGTAACTATTGTAAATCC+TGG | 0.440627 | 4.1:+84126152 | MS.gene24892:CDS |
| CTCGAAAGCATATGGAATGA+TGG | 0.442266 | 4.1:+84126809 | MS.gene24892:CDS |
| AGAAAGGCTTAAGAAAGGTT+TGG | 0.446109 | 4.1:+84127986 | MS.gene24892:CDS |
| CCTTAGAATTGGGACCTGAA+TGG | 0.449662 | 4.1:+84127691 | MS.gene24892:CDS |
| AGAAGGAGCTATATACCTTT+GGG | 0.455675 | 4.1:+84127803 | MS.gene24892:CDS |
| CACAGATTGGAATGTTGTCT+TGG | 0.456455 | 4.1:-84127635 | None:intergenic |
| AGAATTGGTTGCACATGGTT+TGG | 0.459653 | 4.1:+84128010 | MS.gene24892:CDS |
| GCCCTTTCTTCTCTCGGAGA+AGG | 0.462214 | 4.1:+84127765 | MS.gene24892:CDS |
| GAGACCTTTAGAAGAGACTC+TGG | 0.464117 | 4.1:-84126197 | None:intergenic |
| AGCTGGCTCTTGGCTTGTTG+TGG | 0.474046 | 4.1:+84126396 | MS.gene24892:CDS |
| CCTTCTGAAGTAGAAGGGCT+TGG | 0.476025 | 4.1:+84127594 | MS.gene24892:CDS |
| GTTCTTACTCTATGTGATGC+GGG | 0.477132 | 4.1:+84125201 | MS.gene24892:CDS |
| TGTCTTGGACTTTGAGAAGT+TGG | 0.477434 | 4.1:-84127620 | None:intergenic |
| TTACCGTAACGACTAATAGA+AGG | 0.482081 | 4.1:-84124475 | None:intergenic |
| AATCTTAGAATCTCGTTTGG+AGG | 0.482371 | 4.1:+84127933 | MS.gene24892:CDS |
| GCAAATCTGTGCGAGAAAGC+TGG | 0.483447 | 4.1:+84126379 | MS.gene24892:CDS |
| TAGAAGAGACTCTGGAATGT+AGG | 0.483849 | 4.1:-84126189 | None:intergenic |
| GTCTTGGACTTTGAGAAGTT+GGG | 0.486069 | 4.1:-84127619 | None:intergenic |
| CACGGGATTGCTGTTATCCC+TGG | 0.486363 | 4.1:+84127888 | MS.gene24892:CDS |
| ACCTTCTCCGAGAGAAGAAA+GGG | 0.488063 | 4.1:-84127766 | None:intergenic |
| ATGTATGAATTGAAGTAGTA+AGG | 0.492382 | 4.1:-84125246 | None:intergenic |
| TGTGCGAGAAAGCTGGCTCT+TGG | 0.499168 | 4.1:+84126386 | MS.gene24892:CDS |
| GAACAGACAAATTGTCTTGG+AGG | 0.501204 | 4.1:+84127743 | MS.gene24892:CDS |
| GAGCCTTCTATTAGTCGTTA+CGG | 0.507504 | 4.1:+84124472 | MS.gene24892:CDS |
| GGCATTACCAATATACTAGT+TGG | 0.508183 | 4.1:+84125285 | MS.gene24892:CDS |
| GGTTCTATTAAAGGAGGAGA+AGG | 0.509181 | 4.1:+84127786 | MS.gene24892:CDS |
| TCCAAAGCAAGCATTGGATA+AGG | 0.512289 | 4.1:+84124432 | MS.gene24892:CDS |
| CATTCCAGAGTCTCTTCTAA+AGG | 0.515139 | 4.1:+84126193 | MS.gene24892:CDS |
| GCAGCAGAAAGGCTTAAGAA+AGG | 0.515657 | 4.1:+84127981 | MS.gene24892:CDS |
| TTATGGAAATCTTGCAAAGA+GGG | 0.518324 | 4.1:+84123230 | MS.gene24892:CDS |
| TAAAGTGTTTCCGGGTTACC+GGG | 0.520274 | 4.1:-84125309 | None:intergenic |
| AAATAATTTGCACAAATCCT+CGG | 0.526185 | 4.1:+84124991 | MS.gene24892:CDS |
| TCCTGAACTCAGAGCAGCAT+TGG | 0.527559 | 4.1:+84124510 | MS.gene24892:CDS |
| ACTAGTTGGTCCCGGTAACC+CGG | 0.528968 | 4.1:+84125299 | MS.gene24892:CDS |
| ATAGTTACTAGCTTCGGGAC+AGG | 0.530753 | 4.1:-84126140 | None:intergenic |
| AACCTTCTCCGAGAGAAGAA+AGG | 0.530812 | 4.1:-84127767 | None:intergenic |
| AGTCGTTACGGTAACGATGA+AGG | 0.530985 | 4.1:+84124484 | MS.gene24892:CDS |
| CGCTGGCTAGCTAATAGGCA+CGG | 0.532935 | 4.1:+84127870 | MS.gene24892:CDS |
| TCGAAAGCATATGGAATGAT+GGG | 0.535229 | 4.1:+84126810 | MS.gene24892:CDS |
| ATGATTTCGAAGTTGTTCGC+TGG | 0.540586 | 4.1:+84127853 | MS.gene24892:CDS |
| TCATCGTAACCATGTCCGCT+TGG | 0.540923 | 4.1:-84127834 | None:intergenic |
| CCAAGCCCTTCTACTTCAGA+AGG | 0.541143 | 4.1:-84127594 | None:intergenic |
| TACATGTCCTTCCAAATGAC+TGG | 0.541298 | 4.1:+84125264 | MS.gene24892:CDS |
| TCCTCGGTTATGGTTACAGC+CGG | 0.542897 | 4.1:+84125007 | MS.gene24892:CDS |
| TAAGAACAGACAAATTGTCT+TGG | 0.553853 | 4.1:+84127740 | MS.gene24892:CDS |
| GCAACCTCCAAAGCAAGCAT+TGG | 0.556771 | 4.1:+84124426 | MS.gene24892:CDS |
| TTGAAACACACTTGTGTGGA+AGG | 0.559943 | 4.1:+84126759 | MS.gene24892:CDS |
| GAAACACTTTATCCAGATGC+AGG | 0.561975 | 4.1:+84125321 | MS.gene24892:CDS |
| TTCTTACTCTATGTGATGCG+GGG | 0.568076 | 4.1:+84125202 | MS.gene24892:CDS |
| CGCTTGGAATCTTCACCCAA+AGG | 0.571691 | 4.1:-84127818 | None:intergenic |
| ATTGTAGAGCAGCAGCAGAA+AGG | 0.574501 | 4.1:+84127970 | MS.gene24892:CDS |
| CAGCACCGCACGCACTTCCA+GGG | 0.574596 | 4.1:-84127905 | None:intergenic |
| AGTTCTTACTCTATGTGATG+CGG | 0.575309 | 4.1:+84125200 | MS.gene24892:CDS |
| ATTGATCACCTGATTGGCAC+CGG | 0.577365 | 4.1:-84125026 | None:intergenic |
| ACCAATATACTAGTTGGTCC+CGG | 0.579472 | 4.1:+84125291 | MS.gene24892:CDS |
| TCTGGAATGTAGGTTCCAGT+TGG | 0.581009 | 4.1:-84126179 | None:intergenic |
| TTGGAAGAATTGGTTGCACA+TGG | 0.587231 | 4.1:+84128005 | MS.gene24892:CDS |
| AAATCTTGCAAAGAGGGCTG+TGG | 0.590141 | 4.1:+84123236 | MS.gene24892:CDS |
| GTGAAGATTCCAAGCGGACA+TGG | 0.596507 | 4.1:+84127825 | MS.gene24892:CDS |
| CATACCCTTCTGAAGTAGAA+GGG | 0.598726 | 4.1:+84127589 | MS.gene24892:CDS |
| GGTAATGCCAGTCATTTGGA+AGG | 0.600013 | 4.1:-84125271 | None:intergenic |
| GCTGGCTAGCTAATAGGCAC+GGG | 0.607361 | 4.1:+84127871 | MS.gene24892:CDS |
| TCTTACTCTATGTGATGCGG+GGG | 0.608176 | 4.1:+84125203 | MS.gene24892:CDS |
| AAGCATATGGAATGATGGGA+TGG | 0.610773 | 4.1:+84126814 | MS.gene24892:CDS |
| CTTATGGAAATCTTGCAAAG+AGG | 0.623657 | 4.1:+84123229 | MS.gene24892:CDS |
| TGATTTGAAACACACTTGTG+TGG | 0.632329 | 4.1:+84126755 | MS.gene24892:CDS |
| ATTCTAAGGAGTAGAGTGCA+AGG | 0.647441 | 4.1:-84127677 | None:intergenic |
| GTTATCCCTGGAAGTGCGTG+CGG | 0.652820 | 4.1:+84127900 | MS.gene24892:CDS |
| GGAGAAGGTTCTATTAAAGG+AGG | 0.660414 | 4.1:+84127780 | MS.gene24892:CDS |
| CAAGCCCTTCTACTTCAGAA+GGG | 0.667050 | 4.1:-84127593 | None:intergenic |
| CAGATGCAGGAATTGCTACG+AGG | 0.695721 | 4.1:+84123378 | MS.gene24892:intron |
| ACCGGCTGTAACCATAACCG+AGG | 0.713175 | 4.1:-84125008 | None:intergenic |
| GTAAGGAGCATACATAACCA+CGG | 0.721488 | 4.1:-84125229 | None:intergenic |
| CTTTGGGTGAAGATTCCAAG+CGG | 0.736255 | 4.1:+84127819 | MS.gene24892:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTTTATAATTAAAAACAT+TGG | - | chr4.1:84123647-84123666 | None:intergenic | 10.0% |
| !!! | CTAATTTATAATTTTAACAT+TGG | - | chr4.1:84123583-84123602 | None:intergenic | 10.0% |
| !! | AACACTAAAATTGAATTAAT+GGG | + | chr4.1:84126545-84126564 | MS.gene24892:intron | 15.0% |
| !! | ATATATGATATATCTAGAAA+CGG | + | chr4.1:84124078-84124097 | MS.gene24892:intron | 15.0% |
| !! | GATACAAAATATTAAGTTAA+AGG | - | chr4.1:84127054-84127073 | None:intergenic | 15.0% |
| !! | GATTTATTTCATTAATGTAA+AGG | - | chr4.1:84126463-84126482 | None:intergenic | 15.0% |
| !! | TACAAAAAATTATTGTCAAT+AGG | - | chr4.1:84124900-84124919 | None:intergenic | 15.0% |
| !! | TTTCATAAAAATTTGTCAAT+TGG | - | chr4.1:84126924-84126943 | None:intergenic | 15.0% |
| !!! | AATTATAAATTAGTCTAGAT+TGG | + | chr4.1:84123590-84123609 | MS.gene24892:intron | 15.0% |
| !!! | ATATATTAGTTGTTACTTAA+GGG | - | chr4.1:84127513-84127532 | None:intergenic | 15.0% |
| !!! | ATATCAAATTTTATTGTGAT+AGG | + | chr4.1:84125564-84125583 | MS.gene24892:intron | 15.0% |
| !!! | ATGCTAATTTTAATGAATTA+GGG | - | chr4.1:84127268-84127287 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTTCCCTTTAA+GGG | + | chr4.1:84125428-84125447 | MS.gene24892:intron | 15.0% |
| !!! | TATGCTAATTTTAATGAATT+AGG | - | chr4.1:84127269-84127288 | None:intergenic | 15.0% |
| !! | AAATATCCCAAAATTGAAAA+GGG | + | chr4.1:84124233-84124252 | MS.gene24892:intron | 20.0% |
| !! | CAACACTAAAATTGAATTAA+TGG | + | chr4.1:84126544-84126563 | MS.gene24892:intron | 20.0% |
| !! | GAGAAAATGAATATATCATT+TGG | - | chr4.1:84126302-84126321 | None:intergenic | 20.0% |
| !! | TATATGATATATCTAGAAAC+GGG | + | chr4.1:84124079-84124098 | MS.gene24892:intron | 20.0% |
| !! | TATATTAACAAAACAAGCAT+TGG | - | chr4.1:84123462-84123481 | None:intergenic | 20.0% |
| !! | TCAAATAAGCTAATCTAAAT+AGG | - | chr4.1:84124559-84124578 | None:intergenic | 20.0% |
| !! | TGAAAATAACTCTACAATAT+TGG | - | chr4.1:84125939-84125958 | None:intergenic | 20.0% |
| !!! | AATAAGTTGAAAAAAGCTTA+TGG | - | chr4.1:84124650-84124669 | None:intergenic | 20.0% |
| !!! | AATTTTAGTGTTGTTATCAA+AGG | - | chr4.1:84126537-84126556 | None:intergenic | 20.0% |
| !!! | ATAGCAATTTTTAGAAACAT+AGG | - | chr4.1:84124304-84124323 | None:intergenic | 20.0% |
| !!! | GATATATTAGTTGTTACTTA+AGG | - | chr4.1:84127514-84127533 | None:intergenic | 20.0% |
| !!! | GATTTTTTTTTTTCCCTTTA+AGG | + | chr4.1:84125427-84125446 | MS.gene24892:intron | 20.0% |
| !!! | GGTTTTACTTTTAAGAAATT+GGG | + | chr4.1:84125451-84125470 | MS.gene24892:intron | 20.0% |
| !!! | TATTATAAATTAGTCTAGCT+TGG | + | chr4.1:84123513-84123532 | MS.gene24892:intron | 20.0% |
| !!! | TGTGATTACTTTTACTTATA+GGG | + | chr4.1:84124849-84124868 | MS.gene24892:intron | 20.0% |
| !!! | TTTATTTTTTGTCTCTCATT+GGG | + | chr4.1:84123299-84123318 | MS.gene24892:intron | 20.0% |
| !!! | TTTTATTTTTTGTCTCTCAT+TGG | + | chr4.1:84123298-84123317 | MS.gene24892:intron | 20.0% |
| !!! | TTTTTTTTTTTCCCTTTAAG+GGG | + | chr4.1:84125429-84125448 | MS.gene24892:intron | 20.0% |
| ! | AAAAAGCAAAGAATACAACA+AGG | - | chr4.1:84126658-84126677 | None:intergenic | 25.0% |
| ! | AACATGTTACTATAGAATGT+TGG | - | chr4.1:84125751-84125770 | None:intergenic | 25.0% |
| ! | AATATCCCAAAATTGAAAAG+GGG | + | chr4.1:84124234-84124253 | MS.gene24892:intron | 25.0% |
| ! | AATGTAAAGGAATTTCCATT+AGG | - | chr4.1:84126450-84126469 | None:intergenic | 25.0% |
| ! | ACAAATCTATTATTCCTAAG+AGG | + | chr4.1:84125404-84125423 | MS.gene24892:intron | 25.0% |
| ! | ACTCCTATTATCAGTATAAT+TGG | - | chr4.1:84125592-84125611 | None:intergenic | 25.0% |
| ! | ATAAACATTTCAGCATTCAT+TGG | + | chr4.1:84125136-84125155 | MS.gene24892:intron | 25.0% |
| ! | ATATGATATATCTAGAAACG+GGG | + | chr4.1:84124080-84124099 | MS.gene24892:intron | 25.0% |
| ! | ATGTATGAATTGAAGTAGTA+AGG | - | chr4.1:84125249-84125268 | None:intergenic | 25.0% |
| ! | ATTAAACTAACAACATTGTC+AGG | + | chr4.1:84125536-84125555 | MS.gene24892:intron | 25.0% |
| ! | ATTGGGATTTGATATGTATT+TGG | + | chr4.1:84123316-84123335 | MS.gene24892:intron | 25.0% |
| ! | ATTGTCAATAGGATGTTTAA+AGG | - | chr4.1:84124889-84124908 | None:intergenic | 25.0% |
| ! | CAAATATCCCAAAATTGAAA+AGG | + | chr4.1:84124232-84124251 | MS.gene24892:intron | 25.0% |
| ! | CAAATCTATTATTCCTAAGA+GGG | + | chr4.1:84125405-84125424 | MS.gene24892:intron | 25.0% |
| ! | CAAATCTTAAGGATCAATTA+AGG | - | chr4.1:84124923-84124942 | None:intergenic | 25.0% |
| ! | CCAATGTTTGAATTATAAAG+TGG | + | chr4.1:84123776-84123795 | MS.gene24892:intron | 25.0% |
| ! | CCACTTTATAATTCAAACAT+TGG | - | chr4.1:84123779-84123798 | None:intergenic | 25.0% |
| ! | GAAAAAAAAAAATCCCTCTT+AGG | - | chr4.1:84125421-84125440 | None:intergenic | 25.0% |
| ! | GAACCAATTATACTGATAAT+AGG | + | chr4.1:84125586-84125605 | MS.gene24892:intron | 25.0% |
| ! | GATTTGATATGTATTTGGAT+TGG | + | chr4.1:84123321-84123340 | MS.gene24892:intron | 25.0% |
| ! | GTTTGTAGATCTTAAATTTG+AGG | + | chr4.1:84126690-84126709 | MS.gene24892:intron | 25.0% |
| ! | TAAAAATGTCAAGACAAAGT+TGG | + | chr4.1:84127140-84127159 | MS.gene24892:intron | 25.0% |
| ! | TAATCGCAAATTATATAGCT+GGG | - | chr4.1:84125054-84125073 | None:intergenic | 25.0% |
| ! | TGAAAAAGGTAAATGATCTA+AGG | + | chr4.1:84124533-84124552 | MS.gene24892:intron | 25.0% |
| ! | TTAATCGCAAATTATATAGC+TGG | - | chr4.1:84125055-84125074 | None:intergenic | 25.0% |
| ! | TTAATGTTCAAATCTGGTAA+AGG | + | chr4.1:84127481-84127500 | MS.gene24892:intron | 25.0% |
| ! | TTCAAATTGCAGTTACAAAT+TGG | + | chr4.1:84125955-84125974 | MS.gene24892:intron | 25.0% |
| ! | TTCTTTACCTTAACCATAAT+AGG | - | chr4.1:84123273-84123292 | None:intergenic | 25.0% |
| ! | TTCTTTATTCTGTCATAACA+GGG | + | chr4.1:84125077-84125096 | MS.gene24892:intron | 25.0% |
| ! | TTTCTGTAGTTGATCATTAA+TGG | + | chr4.1:84127438-84127457 | MS.gene24892:intron | 25.0% |
| !! | AAATAATTTGCACAAATCCT+CGG | + | chr4.1:84124991-84125010 | MS.gene24892:CDS | 25.0% |
| !! | AACAAGTTCCTTTTCTAAAT+CGG | + | chr4.1:84126346-84126365 | MS.gene24892:intron | 25.0% |
| !! | TAATTGCGATGTAATTTTGA+TGG | - | chr4.1:84127235-84127254 | None:intergenic | 25.0% |
| !! | TTTACAATAGTTACTAGCTT+CGG | - | chr4.1:84126149-84126168 | None:intergenic | 25.0% |
| !! | TTTATATGTGTGTGTTTTTC+TGG | + | chr4.1:84123618-84123637 | MS.gene24892:intron | 25.0% |
| !!! | ATTTTCTTGATTTTTCAGAC+TGG | + | chr4.1:84126090-84126109 | MS.gene24892:intron | 25.0% |
| !!! | GGGTTTTACTTTTAAGAAAT+TGG | + | chr4.1:84125450-84125469 | MS.gene24892:intron | 25.0% |
| !!! | GTGTGATTACTTTTACTTAT+AGG | + | chr4.1:84124848-84124867 | MS.gene24892:intron | 25.0% |
| !!! | TGTTGTATTCTTTGCTTTTT+TGG | + | chr4.1:84126658-84126677 | MS.gene24892:intron | 25.0% |
| !!! | TTCAATTTTGGGATATTTGA+TGG | - | chr4.1:84124231-84124250 | None:intergenic | 25.0% |
| !!! | TTTGTGTGTTTTTTCAATGT+TGG | + | chr4.1:84123490-84123509 | MS.gene24892:intron | 25.0% |
| !!! | TTTGTTTGCTATTAATCCAA+TGG | - | chr4.1:84125389-84125408 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTCCCTTTAAGG+GGG | + | chr4.1:84125430-84125449 | MS.gene24892:intron | 25.0% |
| AAAAGTAAAACCCCCTTAAA+GGG | - | chr4.1:84125443-84125462 | None:intergenic | 30.0% | |
| AACTAATGGAGATGCATTAT+CGG | - | chr4.1:84126037-84126056 | None:intergenic | 30.0% | |
| AAGAAATCAGACACAACTAA+TGG | - | chr4.1:84126051-84126070 | None:intergenic | 30.0% | |
| AATAATACCACAAATCCAAC+GGG | - | chr4.1:84127008-84127027 | None:intergenic | 30.0% | |
| AATCACACTAACAAGAAACT+AGG | - | chr4.1:84124836-84124855 | None:intergenic | 30.0% | |
| AATCGCAAATTATATAGCTG+GGG | - | chr4.1:84125053-84125072 | None:intergenic | 30.0% | |
| ACAGTGAAAACTGAAATTCT+TGG | + | chr4.1:84125633-84125652 | MS.gene24892:intron | 30.0% | |
| ACCAACAACAATAACAACAT+TGG | - | chr4.1:84123722-84123741 | None:intergenic | 30.0% | |
| ATCACACTAACAAGAAACTA+GGG | - | chr4.1:84124835-84124854 | None:intergenic | 30.0% | |
| CAATAATACCACAAATCCAA+CGG | - | chr4.1:84127009-84127028 | None:intergenic | 30.0% | |
| CCATAGAAAGAAAACTTGAA+TGG | - | chr4.1:84126248-84126267 | None:intergenic | 30.0% | |
| CTACAATATTGGATTCTCAT+TGG | - | chr4.1:84125928-84125947 | None:intergenic | 30.0% | |
| CTAGTAACTATTGTAAATCC+TGG | + | chr4.1:84126152-84126171 | MS.gene24892:CDS | 30.0% | |
| CTGTAGTTAATGTTCAAATC+TGG | + | chr4.1:84127475-84127494 | MS.gene24892:intron | 30.0% | |
| GAAATTATTGAAGCACAGAT+TGG | - | chr4.1:84127651-84127670 | None:intergenic | 30.0% | |
| GGATTTGTGGTATTATTGAT+AGG | + | chr4.1:84127011-84127030 | MS.gene24892:intron | 30.0% | |
| GTTCTTTATTCTGTCATAAC+AGG | + | chr4.1:84125076-84125095 | MS.gene24892:intron | 30.0% | |
| TAAAAGTAAAACCCCCTTAA+AGG | - | chr4.1:84125444-84125463 | None:intergenic | 30.0% | |
| TAAAGGAATTTCCATTAGGA+TGG | - | chr4.1:84126446-84126465 | None:intergenic | 30.0% | |
| TAAGAAAGGTTTGGAAGAAT+TGG | + | chr4.1:84127995-84128014 | MS.gene24892:CDS | 30.0% | |
| TAAGAACAGACAAATTGTCT+TGG | + | chr4.1:84127740-84127759 | MS.gene24892:CDS | 30.0% | |
| TATCACAAGATGAAGTATGA+TGG | - | chr4.1:84125711-84125730 | None:intergenic | 30.0% | |
| TGAGATTGAAGCCATAAAAT+GGG | - | chr4.1:84124037-84124056 | None:intergenic | 30.0% | |
| TGCATAAACACTTAATGTGT+AGG | - | chr4.1:84124777-84124796 | None:intergenic | 30.0% | |
| TTATGGAAATCTTGCAAAGA+GGG | + | chr4.1:84123230-84123249 | MS.gene24892:CDS | 30.0% | |
| TTATTGTCCTATATGTATGC+AGG | + | chr4.1:84126718-84126737 | MS.gene24892:intron | 30.0% | |
| TTGAGATTGAAGCCATAAAA+TGG | - | chr4.1:84124038-84124057 | None:intergenic | 30.0% | |
| ! | AAATCTCCCCTTTTCAATTT+TGG | - | chr4.1:84124243-84124262 | None:intergenic | 30.0% |
| ! | AAGAATTTCAGTTTTCACTG+TGG | - | chr4.1:84125634-84125653 | None:intergenic | 30.0% |
| ! | AATCTCCCCTTTTCAATTTT+GGG | - | chr4.1:84124242-84124261 | None:intergenic | 30.0% |
| ! | AATTATAAACTAGCCTAGCT+TGG | + | chr4.1:84123655-84123674 | MS.gene24892:intron | 30.0% |
| ! | CTGAAATTTTTCTTCTGTAG+GGG | + | chr4.1:84124392-84124411 | MS.gene24892:intron | 30.0% |
| ! | GATGGATTCGAAATACAAAA+TGG | - | chr4.1:84125693-84125712 | None:intergenic | 30.0% |
| ! | GCTGAAATTTTTCTTCTGTA+GGG | + | chr4.1:84124391-84124410 | MS.gene24892:intron | 30.0% |
| ! | TAAAGTACCTGCATACATAT+AGG | - | chr4.1:84126728-84126747 | None:intergenic | 30.0% |
| ! | TCCAATGTTGTTATTGTTGT+TGG | + | chr4.1:84123718-84123737 | MS.gene24892:intron | 30.0% |
| ! | TGAAATTTTTCTTCTGTAGG+GGG | + | chr4.1:84124393-84124412 | MS.gene24892:intron | 30.0% |
| ! | TGCTGAAATTTTTCTTCTGT+AGG | + | chr4.1:84124390-84124409 | MS.gene24892:intron | 30.0% |
| ! | TTACAATAGTTACTAGCTTC+GGG | - | chr4.1:84126148-84126167 | None:intergenic | 30.0% |
| ! | TTGATAGGAAAATTTGCTCT+AGG | + | chr4.1:84127026-84127045 | MS.gene24892:intron | 30.0% |
| ! | TTGGAGCATCAAAAAGATTA+CGG | + | chr4.1:84123906-84123925 | MS.gene24892:intron | 30.0% |
| !! | CCATTCAAGTTTTCTTTCTA+TGG | + | chr4.1:84126245-84126264 | MS.gene24892:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr4.1:84124685-84124704 | None:intergenic | 30.0% |
| !! | TTTTGGCAAAAAGTACACTT+TGG | + | chr4.1:84123887-84123906 | MS.gene24892:intron | 30.0% |
| !!! | GTGTCAAGTTAGTCATTTTT+TGG | + | chr4.1:84127099-84127118 | MS.gene24892:intron | 30.0% |
| AAGGACTATGCAACATAACA+AGG | - | chr4.1:84126518-84126537 | None:intergenic | 35.0% | |
| AATCTTAGAATCTCGTTTGG+AGG | + | chr4.1:84127933-84127952 | MS.gene24892:CDS | 35.0% | |
| AGAAACTTCTTTACGACCAT+TGG | + | chr4.1:84125370-84125389 | MS.gene24892:intron | 35.0% | |
| AGAAAGGCTTAAGAAAGGTT+TGG | + | chr4.1:84127986-84128005 | MS.gene24892:CDS | 35.0% | |
| AGAAGGAGCTATATACCTTT+GGG | + | chr4.1:84127803-84127822 | MS.gene24892:CDS | 35.0% | |
| AGTTCTTACTCTATGTGATG+CGG | + | chr4.1:84125200-84125219 | MS.gene24892:CDS | 35.0% | |
| ATCGCAAATTATATAGCTGG+GGG | - | chr4.1:84125052-84125071 | None:intergenic | 35.0% | |
| CATTCGATAGTTGTATAGCA+TGG | - | chr4.1:84126962-84126981 | None:intergenic | 35.0% | |
| CCATAAAATGGGATTCAAAC+AGG | - | chr4.1:84124026-84124045 | None:intergenic | 35.0% | |
| CTTATGGAAATCTTGCAAAG+AGG | + | chr4.1:84123229-84123248 | MS.gene24892:CDS | 35.0% | |
| GGAAATCTTAGAATCTCGTT+TGG | + | chr4.1:84127930-84127949 | MS.gene24892:CDS | 35.0% | |
| GGCAAACATTTCATGTAGTA+AGG | - | chr4.1:84124210-84124229 | None:intergenic | 35.0% | |
| GGCATTACCAATATACTAGT+TGG | + | chr4.1:84125285-84125304 | MS.gene24892:CDS | 35.0% | |
| GTAAGTCTTTACCATCCTAA+TGG | + | chr4.1:84126432-84126451 | MS.gene24892:intron | 35.0% | |
| TCTTACTCGACCATTCAAAA+AGG | + | chr4.1:84127192-84127211 | MS.gene24892:intron | 35.0% | |
| TGAGATGCCTATTATGGTTA+AGG | + | chr4.1:84123263-84123282 | MS.gene24892:CDS | 35.0% | |
| TGATGAGTTTGGCAAAATCA+CGG | - | chr4.1:84123941-84123960 | None:intergenic | 35.0% | |
| TTACCGTAACGACTAATAGA+AGG | - | chr4.1:84124478-84124497 | None:intergenic | 35.0% | |
| TTGAGCGAACACAAATCTTA+AGG | - | chr4.1:84124934-84124953 | None:intergenic | 35.0% | |
| TTGTCAACTTGGGTCTATAT+TGG | + | chr4.1:84127397-84127416 | MS.gene24892:intron | 35.0% | |
| TTTCTAAATATCTGCAGTGC+AGG | + | chr4.1:84125164-84125183 | MS.gene24892:intron | 35.0% | |
| ! | ACTTTTTGCCAAAATCGCAA+TGG | - | chr4.1:84123881-84123900 | None:intergenic | 35.0% |
| ! | AGCAAGAGTTTTTACTCGTT+CGG | - | chr4.1:84127721-84127740 | None:intergenic | 35.0% |
| ! | CCTGTTTGAATCCCATTTTA+TGG | + | chr4.1:84124023-84124042 | MS.gene24892:intron | 35.0% |
| ! | GAATGGTCGAGTAAGATTTT+TGG | - | chr4.1:84127188-84127207 | None:intergenic | 35.0% |
| ! | GTTTTTGTGTTTTCAGATGC+AGG | + | chr4.1:84123365-84123384 | MS.gene24892:intron | 35.0% |
| ! | TCGAAAGCATATGGAATGAT+GGG | + | chr4.1:84126810-84126829 | MS.gene24892:CDS | 35.0% |
| ! | TGATTTGAAACACACTTGTG+TGG | + | chr4.1:84126755-84126774 | MS.gene24892:CDS | 35.0% |
| ! | TGATTTTGCCAAACTCATCA+CGG | + | chr4.1:84123941-84123960 | MS.gene24892:intron | 35.0% |
| ! | TGGAGCATCAAAAAGATTAC+GGG | + | chr4.1:84123907-84123926 | MS.gene24892:intron | 35.0% |
| ! | TTCAGATTTTCATCGTACGT+GGG | + | chr4.1:84123999-84124018 | MS.gene24892:intron | 35.0% |
| ! | TTCTCTTTCTCGAAAGCATA+TGG | + | chr4.1:84126801-84126820 | MS.gene24892:CDS | 35.0% |
| ! | TTTCAGATTTTCATCGTACG+TGG | + | chr4.1:84123998-84124017 | MS.gene24892:intron | 35.0% |
| !! | AAGAGTTTTTGAGAGAAGCT+TGG | + | chr4.1:84123969-84123988 | MS.gene24892:intron | 35.0% |
| !! | ACAAAACAAGCATTGGAAAC+AGG | - | chr4.1:84123455-84123474 | None:intergenic | 35.0% |
| !! | ATGTATTTGGATTGGTGATC+TGG | + | chr4.1:84123329-84123348 | MS.gene24892:intron | 35.0% |
| !! | CTGGTTGGAAAAAGTGTTAT+CGG | + | chr4.1:84126109-84126128 | MS.gene24892:CDS | 35.0% |
| !! | TATTGGTAATGCCAGTCATT+TGG | - | chr4.1:84125278-84125297 | None:intergenic | 35.0% |
| !! | TCTTGATTTTTCAGACTGGT+TGG | + | chr4.1:84126094-84126113 | MS.gene24892:intron | 35.0% |
| ACCAATATACTAGTTGGTCC+CGG | + | chr4.1:84125291-84125310 | MS.gene24892:CDS | 40.0% | |
| ACCTTATCCAATGCTTGCTT+TGG | - | chr4.1:84124436-84124455 | None:intergenic | 40.0% | |
| AGAATTGGTTGCACATGGTT+TGG | + | chr4.1:84128010-84128029 | MS.gene24892:CDS | 40.0% | |
| AGCATCAAAAAGATTACGGG+CGG | + | chr4.1:84123910-84123929 | MS.gene24892:intron | 40.0% | |
| AGCTAAGAATGCTGTGTCTT+TGG | + | chr4.1:84123401-84123420 | MS.gene24892:CDS | 40.0% | |
| AGTGTGTAGTAGACGAGAAA+AGG | + | chr4.1:84125858-84125877 | MS.gene24892:intron | 40.0% | |
| ATGATTTCGAAGTTGTTCGC+TGG | + | chr4.1:84127853-84127872 | MS.gene24892:CDS | 40.0% | |
| CACAGATTGGAATGTTGTCT+TGG | - | chr4.1:84127638-84127657 | None:intergenic | 40.0% | |
| CATTCCAGAGTCTCTTCTAA+AGG | + | chr4.1:84126193-84126212 | MS.gene24892:CDS | 40.0% | |
| CTCGGAGAAGGTTCTATTAA+AGG | + | chr4.1:84127777-84127796 | MS.gene24892:CDS | 40.0% | |
| CTGTTGTTGTGTGTGATTTC+TGG | + | chr4.1:84123693-84123712 | MS.gene24892:intron | 40.0% | |
| CTTAGAATTGGGACCTGAAT+GGG | + | chr4.1:84127692-84127711 | MS.gene24892:CDS | 40.0% | |
| CTTTGTATCCGTGATGAGTT+TGG | - | chr4.1:84123952-84123971 | None:intergenic | 40.0% | |
| GAAACACTTTATCCAGATGC+AGG | + | chr4.1:84125321-84125340 | MS.gene24892:CDS | 40.0% | |
| GAACAGACAAATTGTCTTGG+AGG | + | chr4.1:84127743-84127762 | MS.gene24892:CDS | 40.0% | |
| GAGAAGGAGCTATATACCTT+TGG | + | chr4.1:84127802-84127821 | MS.gene24892:CDS | 40.0% | |
| GAGCCTTCTATTAGTCGTTA+CGG | + | chr4.1:84124472-84124491 | MS.gene24892:CDS | 40.0% | |
| GCACTCTACTCCTTAGAATT+GGG | + | chr4.1:84127681-84127700 | MS.gene24892:CDS | 40.0% | |
| GGAAACTGAGATGCCTATTA+TGG | + | chr4.1:84123257-84123276 | MS.gene24892:CDS | 40.0% | |
| GGAGAAGGTTCTATTAAAGG+AGG | + | chr4.1:84127780-84127799 | MS.gene24892:CDS | 40.0% | |
| GGTTCTATTAAAGGAGGAGA+AGG | + | chr4.1:84127786-84127805 | MS.gene24892:CDS | 40.0% | |
| GTGTGTAGTAGACGAGAAAA+GGG | + | chr4.1:84125859-84125878 | MS.gene24892:intron | 40.0% | |
| GTTCTTACTCTATGTGATGC+GGG | + | chr4.1:84125201-84125220 | MS.gene24892:CDS | 40.0% | |
| TACATGTCCTTCCAAATGAC+TGG | + | chr4.1:84125264-84125283 | MS.gene24892:CDS | 40.0% | |
| TGCACTCTACTCCTTAGAAT+TGG | + | chr4.1:84127680-84127699 | MS.gene24892:CDS | 40.0% | |
| TGTGTAGTAGACGAGAAAAG+GGG | + | chr4.1:84125860-84125879 | MS.gene24892:intron | 40.0% | |
| TGTGTTAGTAAGCGCATGTT+TGG | + | chr4.1:84123823-84123842 | MS.gene24892:intron | 40.0% | |
| TTATCCAATGCTTGCTTTGG+AGG | - | chr4.1:84124433-84124452 | None:intergenic | 40.0% | |
| TTCTTACTCTATGTGATGCG+GGG | + | chr4.1:84125202-84125221 | MS.gene24892:CDS | 40.0% | |
| TTGAAACACACTTGTGTGGA+AGG | + | chr4.1:84126759-84126778 | MS.gene24892:CDS | 40.0% | |
| TTGGAAGAATTGGTTGCACA+TGG | + | chr4.1:84128005-84128024 | MS.gene24892:CDS | 40.0% | |
| TTTGCACAAATCCTCGGTTA+TGG | + | chr4.1:84124997-84125016 | MS.gene24892:CDS | 40.0% | |
| ! | AAGCATATGGAATGATGGGA+TGG | + | chr4.1:84126814-84126833 | MS.gene24892:CDS | 40.0% |
| ! | AATTTTTCTTCTGTAGGGGG+TGG | + | chr4.1:84124396-84124415 | MS.gene24892:intron | 40.0% |
| ! | ACTTATAGGGAAGTACGACT+TGG | + | chr4.1:84124862-84124881 | MS.gene24892:intron | 40.0% |
| ! | ATAAAGTGTTTCCGGGTTAC+CGG | - | chr4.1:84125313-84125332 | None:intergenic | 40.0% |
| ! | ATGGGTTGCATTCATGAATG+AGG | + | chr4.1:84126563-84126582 | MS.gene24892:intron | 40.0% |
| ! | ATTCTAAGGAGTAGAGTGCA+AGG | - | chr4.1:84127680-84127699 | None:intergenic | 40.0% |
| ! | CACAGTTGATTGCTCACTTT+TGG | + | chr4.1:84126624-84126643 | MS.gene24892:intron | 40.0% |
| ! | CATCTGGATAAAGTGTTTCC+GGG | - | chr4.1:84125320-84125339 | None:intergenic | 40.0% |
| ! | CTCGAAAGCATATGGAATGA+TGG | + | chr4.1:84126809-84126828 | MS.gene24892:CDS | 40.0% |
| ! | CTTATAGGGAAGTACGACTT+GGG | + | chr4.1:84124863-84124882 | MS.gene24892:intron | 40.0% |
| ! | GATTGGTGATCTGGAATTTG+AGG | + | chr4.1:84123338-84123357 | MS.gene24892:intron | 40.0% |
| ! | GCATCTGGATAAAGTGTTTC+CGG | - | chr4.1:84125321-84125340 | None:intergenic | 40.0% |
| ! | GCTCTCTTTTTGATGAGAAC+TGG | + | chr4.1:84124113-84124132 | MS.gene24892:intron | 40.0% |
| ! | GTAAGGAGCATACATAACCA+CGG | - | chr4.1:84125232-84125251 | None:intergenic | 40.0% |
| ! | GTCTTGGACTTTGAGAAGTT+GGG | - | chr4.1:84127622-84127641 | None:intergenic | 40.0% |
| ! | GTGTGTGTGTGTGTGTTTTA+TGG | + | chr4.1:84123750-84123769 | MS.gene24892:intron | 40.0% |
| ! | GTTTGGAATAGTGGTGAGAT+TGG | + | chr4.1:84123840-84123859 | MS.gene24892:intron | 40.0% |
| ! | TAAGCGCATGTTTGGAATAG+TGG | + | chr4.1:84123831-84123850 | MS.gene24892:intron | 40.0% |
| ! | TAGACCCAAGTTGACAAACA+TGG | - | chr4.1:84127394-84127413 | None:intergenic | 40.0% |
| ! | TGTCTTGGACTTTGAGAAGT+TGG | - | chr4.1:84127623-84127642 | None:intergenic | 40.0% |
| ! | TTTCAGTTTTCACTGTGGCA+AGG | - | chr4.1:84125629-84125648 | None:intergenic | 40.0% |
| !! | CATACCCTTCTGAAGTAGAA+GGG | + | chr4.1:84127589-84127608 | MS.gene24892:CDS | 40.0% |
| !! | TAGAAGAGACTCTGGAATGT+AGG | - | chr4.1:84126192-84126211 | None:intergenic | 40.0% |
| !! | TCCAAAGCAAGCATTGGATA+AGG | + | chr4.1:84124432-84124451 | MS.gene24892:CDS | 40.0% |
| !! | TGGTCGAGTAAGATTTTTGG+TGG | - | chr4.1:84127185-84127204 | None:intergenic | 40.0% |
| AAATCTTGCAAAGAGGGCTG+TGG | + | chr4.1:84123236-84123255 | MS.gene24892:CDS | 45.0% | |
| AACCTTCTCCGAGAGAAGAA+AGG | - | chr4.1:84127770-84127789 | None:intergenic | 45.0% | |
| ACAGCAACAATAGCCAAGCT+AGG | - | chr4.1:84123671-84123690 | None:intergenic | 45.0% | |
| ACCGGGACCAACTAGTATAT+TGG | - | chr4.1:84125295-84125314 | None:intergenic | 45.0% | |
| ACCTTCTCCGAGAGAAGAAA+GGG | - | chr4.1:84127769-84127788 | None:intergenic | 45.0% | |
| AGCCTCCATGTTTGTCAACT+TGG | + | chr4.1:84127386-84127405 | MS.gene24892:intron | 45.0% | |
| AGTCGTTACGGTAACGATGA+AGG | + | chr4.1:84124484-84124503 | MS.gene24892:CDS | 45.0% | |
| ATTGATCACCTGATTGGCAC+CGG | - | chr4.1:84125029-84125048 | None:intergenic | 45.0% | |
| ATTGTAGAGCAGCAGCAGAA+AGG | + | chr4.1:84127970-84127989 | MS.gene24892:CDS | 45.0% | |
| CAAGAAACTAGGGCTCTGTT+TGG | - | chr4.1:84124825-84124844 | None:intergenic | 45.0% | |
| CAAGCCCTTCTACTTCAGAA+GGG | - | chr4.1:84127596-84127615 | None:intergenic | 45.0% | |
| CCATTCAGGTCCCAATTCTA+AGG | - | chr4.1:84127694-84127713 | None:intergenic | 45.0% | |
| CCTTAGAATTGGGACCTGAA+TGG | + | chr4.1:84127691-84127710 | MS.gene24892:CDS | 45.0% | |
| CTTTGGGTGAAGATTCCAAG+CGG | + | chr4.1:84127819-84127838 | MS.gene24892:CDS | 45.0% | |
| GCAATGACTTTACCTGCATC+TGG | - | chr4.1:84125336-84125355 | None:intergenic | 45.0% | |
| GCAGCAGAAAGGCTTAAGAA+AGG | + | chr4.1:84127981-84128000 | MS.gene24892:CDS | 45.0% | |
| GCCTCCATGTTTGTCAACTT+GGG | + | chr4.1:84127387-84127406 | MS.gene24892:intron | 45.0% | |
| GGTAATGCCAGTCATTTGGA+AGG | - | chr4.1:84125274-84125293 | None:intergenic | 45.0% | |
| GTAAATCCTGGCAATCCAAC+TGG | + | chr4.1:84126164-84126183 | MS.gene24892:CDS | 45.0% | |
| TCTTACTCTATGTGATGCGG+GGG | + | chr4.1:84125203-84125222 | MS.gene24892:CDS | 45.0% | |
| TGAGTTTGGCAAAATCACGG+CGG | - | chr4.1:84123938-84123957 | None:intergenic | 45.0% | |
| TGGAATAGTGGTGAGATTGG+AGG | + | chr4.1:84123843-84123862 | MS.gene24892:intron | 45.0% | |
| TTCTGTAGGGGGTGGTTTAT+TGG | + | chr4.1:84124404-84124423 | MS.gene24892:intron | 45.0% | |
| ! | ACCCAAGTTGACAAACATGG+AGG | - | chr4.1:84127391-84127410 | None:intergenic | 45.0% |
| ! | ATAGTTACTAGCTTCGGGAC+AGG | - | chr4.1:84126143-84126162 | None:intergenic | 45.0% |
| ! | GAGACCTTTAGAAGAGACTC+TGG | - | chr4.1:84126200-84126219 | None:intergenic | 45.0% |
| ! | TAAAGTGTTTCCGGGTTACC+GGG | - | chr4.1:84125312-84125331 | None:intergenic | 45.0% |
| ! | TCCTCTGGCCGATTTAGAAA+AGG | - | chr4.1:84126357-84126376 | None:intergenic | 45.0% |
| ! | TCCTTTTCTAAATCGGCCAG+AGG | + | chr4.1:84126353-84126372 | MS.gene24892:intron | 45.0% |
| ! | TCTGGAATGTAGGTTCCAGT+TGG | - | chr4.1:84126182-84126201 | None:intergenic | 45.0% |
| ! | TTGTTCGCTGGCTAGCTAAT+AGG | + | chr4.1:84127865-84127884 | MS.gene24892:CDS | 45.0% |
| !! | CAGAGCAGCATTGGTGAAAA+AGG | + | chr4.1:84124519-84124538 | MS.gene24892:CDS | 45.0% |
| !! | GCATACCCTTCTGAAGTAGA+AGG | + | chr4.1:84127588-84127607 | MS.gene24892:CDS | 45.0% |
| AACATGCAGTGATGTCCCGT+TGG | + | chr4.1:84126990-84127009 | MS.gene24892:intron | 50.0% | |
| AACTGGATCCTCTTGCAGTC+AGG | + | chr4.1:84124130-84124149 | MS.gene24892:intron | 50.0% | |
| ACTCGTTCGGTAACCCATTC+AGG | - | chr4.1:84127708-84127727 | None:intergenic | 50.0% | |
| ACTGGATCCTCTTGCAGTCA+GGG | + | chr4.1:84124131-84124150 | MS.gene24892:intron | 50.0% | |
| CAGATGCAGGAATTGCTACG+AGG | + | chr4.1:84123378-84123397 | MS.gene24892:intron | 50.0% | |
| CCAAGCCCTTCTACTTCAGA+AGG | - | chr4.1:84127597-84127616 | None:intergenic | 50.0% | |
| CGCACAGATTTGCAATCCTC+TGG | - | chr4.1:84126372-84126391 | None:intergenic | 50.0% | |
| CGCTTGGAATCTTCACCCAA+AGG | - | chr4.1:84127821-84127840 | None:intergenic | 50.0% | |
| CTCAATGCAAGCGACATGAG+TGG | + | chr4.1:84124053-84124072 | MS.gene24892:intron | 50.0% | |
| GCAAATCTGTGCGAGAAAGC+TGG | + | chr4.1:84126379-84126398 | MS.gene24892:CDS | 50.0% | |
| GCAACCTCCAAAGCAAGCAT+TGG | + | chr4.1:84124426-84124445 | MS.gene24892:CDS | 50.0% | |
| GTGAAGATTCCAAGCGGACA+TGG | + | chr4.1:84127825-84127844 | MS.gene24892:CDS | 50.0% | |
| GTGATGTCCCGTTGGATTTG+TGG | + | chr4.1:84126998-84127017 | MS.gene24892:intron | 50.0% | |
| TAGGTTCCAGTTGGATTGCC+AGG | - | chr4.1:84126173-84126192 | None:intergenic | 50.0% | |
| TCATCGTAACCATGTCCGCT+TGG | - | chr4.1:84127837-84127856 | None:intergenic | 50.0% | |
| TCCTCGGTTATGGTTACAGC+CGG | + | chr4.1:84125007-84125026 | MS.gene24892:CDS | 50.0% | |
| TCCTGAACTCAGAGCAGCAT+TGG | + | chr4.1:84124510-84124529 | MS.gene24892:CDS | 50.0% | |
| TGGGGGATTGATCACCTGAT+TGG | - | chr4.1:84125035-84125054 | None:intergenic | 50.0% | |
| TTGGAGGCCCTTTCTTCTCT+CGG | + | chr4.1:84127759-84127778 | MS.gene24892:CDS | 50.0% | |
| ! | ACCAATGCTGCTCTGAGTTC+AGG | - | chr4.1:84124514-84124533 | None:intergenic | 50.0% |
| ! | ACGACGAGCCATTGCGATTT+TGG | + | chr4.1:84123870-84123889 | MS.gene24892:intron | 50.0% |
| ! | GAATGCTGTGTCTTTGGCTC+AGG | + | chr4.1:84123407-84123426 | MS.gene24892:CDS | 50.0% |
| ! | GGAATGATGGGATGGCGAAT+TGG | + | chr4.1:84126822-84126841 | MS.gene24892:CDS | 50.0% |
| !! | CCTTCTGAAGTAGAAGGGCT+TGG | + | chr4.1:84127594-84127613 | MS.gene24892:CDS | 50.0% |
| !! | GGGTCTATATTGGTGCTGAG+CGG | + | chr4.1:84127407-84127426 | MS.gene24892:intron | 50.0% |
| ACCGGCTGTAACCATAACCG+AGG | - | chr4.1:84125011-84125030 | None:intergenic | 55.0% | |
| ACTAGTTGGTCCCGGTAACC+CGG | + | chr4.1:84125299-84125318 | MS.gene24892:CDS | 55.0% | |
| CTGGATCCTCTTGCAGTCAG+GGG | + | chr4.1:84124132-84124151 | MS.gene24892:intron | 55.0% | |
| GCCCTTTCTTCTCTCGGAGA+AGG | + | chr4.1:84127765-84127784 | MS.gene24892:CDS | 55.0% | |
| TGTGATCCCCTGACTGCAAG+AGG | - | chr4.1:84124141-84124160 | None:intergenic | 55.0% | |
| ! | CACGGGATTGCTGTTATCCC+TGG | + | chr4.1:84127888-84127907 | MS.gene24892:CDS | 55.0% |
| ! | CGCTGGCTAGCTAATAGGCA+CGG | + | chr4.1:84127870-84127889 | MS.gene24892:CDS | 55.0% |
| ! | GCTGGCTAGCTAATAGGCAC+GGG | + | chr4.1:84127871-84127890 | MS.gene24892:CDS | 55.0% |
| ! | GTTATCCCTGGAAGTGCGTG+CGG | + | chr4.1:84127900-84127919 | MS.gene24892:CDS | 55.0% |
| ! | TGTGCGAGAAAGCTGGCTCT+TGG | + | chr4.1:84126386-84126405 | MS.gene24892:CDS | 55.0% |
| !! | AGCTGGCTCTTGGCTTGTTG+TGG | + | chr4.1:84126396-84126415 | MS.gene24892:CDS | 55.0% |
| ATGTGATGCGGGGGATTCCG+TGG | + | chr4.1:84125212-84125231 | MS.gene24892:CDS | 60.0% | |
| ! | GGTTACAGCCGGTGCCAATC+AGG | + | chr4.1:84125018-84125037 | MS.gene24892:CDS | 60.0% |
| CAGCACCGCACGCACTTCCA+GGG | - | chr4.1:84127908-84127927 | None:intergenic | 65.0% | |
| GCAGCACCGCACGCACTTCC+AGG | - | chr4.1:84127909-84127928 | None:intergenic | 70.0% | |
| !! | GGAAGTGCGTGCGGTGCTGC+TGG | + | chr4.1:84127909-84127928 | MS.gene24892:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 84123222 | 84128043 | 84123222 | ID=MS.gene24892 |
| chr4.1 | mRNA | 84123222 | 84128043 | 84123222 | ID=MS.gene24892.t1;Parent=MS.gene24892 |
| chr4.1 | exon | 84123222 | 84123284 | 84123222 | ID=MS.gene24892.t1.exon1;Parent=MS.gene24892.t1 |
| chr4.1 | CDS | 84123222 | 84123284 | 84123222 | ID=cds.MS.gene24892.t1;Parent=MS.gene24892.t1 |
| chr4.1 | exon | 84123381 | 84123428 | 84123381 | ID=MS.gene24892.t1.exon2;Parent=MS.gene24892.t1 |
| chr4.1 | CDS | 84123381 | 84123428 | 84123381 | ID=cds.MS.gene24892.t1;Parent=MS.gene24892.t1 |
| chr4.1 | exon | 84124412 | 84124540 | 84124412 | ID=MS.gene24892.t1.exon3;Parent=MS.gene24892.t1 |
| chr4.1 | CDS | 84124412 | 84124540 | 84124412 | ID=cds.MS.gene24892.t1;Parent=MS.gene24892.t1 |
| chr4.1 | exon | 84124980 | 84125039 | 84124980 | ID=MS.gene24892.t1.exon4;Parent=MS.gene24892.t1 |
| chr4.1 | CDS | 84124980 | 84125039 | 84124980 | ID=cds.MS.gene24892.t1;Parent=MS.gene24892.t1 |
| chr4.1 | exon | 84125186 | 84125342 | 84125186 | ID=MS.gene24892.t1.exon5;Parent=MS.gene24892.t1 |
| chr4.1 | CDS | 84125186 | 84125342 | 84125186 | ID=cds.MS.gene24892.t1;Parent=MS.gene24892.t1 |
| chr4.1 | exon | 84126108 | 84126214 | 84126108 | ID=MS.gene24892.t1.exon6;Parent=MS.gene24892.t1 |
| chr4.1 | CDS | 84126108 | 84126214 | 84126108 | ID=cds.MS.gene24892.t1;Parent=MS.gene24892.t1 |
| chr4.1 | exon | 84126373 | 84126431 | 84126373 | ID=MS.gene24892.t1.exon7;Parent=MS.gene24892.t1 |
| chr4.1 | CDS | 84126373 | 84126431 | 84126373 | ID=cds.MS.gene24892.t1;Parent=MS.gene24892.t1 |
| chr4.1 | exon | 84126740 | 84126848 | 84126740 | ID=MS.gene24892.t1.exon8;Parent=MS.gene24892.t1 |
| chr4.1 | CDS | 84126740 | 84126848 | 84126740 | ID=cds.MS.gene24892.t1;Parent=MS.gene24892.t1 |
| chr4.1 | exon | 84127585 | 84128043 | 84127585 | ID=MS.gene24892.t1.exon9;Parent=MS.gene24892.t1 |
| chr4.1 | CDS | 84127585 | 84128043 | 84127585 | ID=cds.MS.gene24892.t1;Parent=MS.gene24892.t1 |
| Gene Sequence |
| Protein sequence |
