Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25047.t1 | XP_003627440.1 | 99.7 | 359 | 1 | 0 | 1 | 359 | 1 | 359 | 9.80E-196 | 692.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25047.t1 | Q54I81 | 44.0 | 316 | 164 | 3 | 55 | 358 | 6 | 320 | 1.9e-62 | 241.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25047.t1 | G7L962 | 99.7 | 359 | 1 | 0 | 1 | 359 | 1 | 359 | 7.1e-196 | 692.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051030 | MS.gene25047 | 0.970092 | 4.29E-131 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25047.t1 | MTR_8g023040 | 99.721 | 359 | 1 | 0 | 1 | 359 | 1 | 359 | 0.0 | 741 |
| MS.gene25047.t1 | MTR_5g031790 | 29.565 | 230 | 137 | 3 | 144 | 348 | 160 | 389 | 2.88e-20 | 91.7 |
| MS.gene25047.t1 | MTR_5g031790 | 29.565 | 230 | 137 | 3 | 144 | 348 | 157 | 386 | 3.07e-20 | 91.7 |
| MS.gene25047.t1 | MTR_2g055750 | 29.365 | 252 | 152 | 8 | 118 | 350 | 122 | 366 | 2.66e-16 | 79.7 |
| MS.gene25047.t1 | MTR_2g055750 | 29.365 | 252 | 152 | 8 | 118 | 350 | 199 | 443 | 3.10e-16 | 80.1 |
| MS.gene25047.t1 | MTR_2g055750 | 29.365 | 252 | 152 | 8 | 118 | 350 | 378 | 622 | 8.80e-16 | 79.0 |
| MS.gene25047.t1 | MTR_2g055750 | 29.032 | 248 | 150 | 8 | 118 | 346 | 122 | 362 | 2.25e-15 | 77.0 |
| MS.gene25047.t1 | MTR_2g055750 | 29.032 | 248 | 150 | 8 | 118 | 346 | 199 | 439 | 3.00e-15 | 77.0 |
| MS.gene25047.t1 | MTR_2g055750 | 29.032 | 248 | 150 | 8 | 118 | 346 | 378 | 618 | 9.36e-15 | 75.9 |
| MS.gene25047.t1 | MTR_6g017100 | 28.019 | 207 | 122 | 5 | 164 | 350 | 258 | 457 | 4.98e-14 | 73.6 |
| MS.gene25047.t1 | MTR_6g017100 | 28.019 | 207 | 122 | 5 | 164 | 350 | 438 | 637 | 1.47e-13 | 72.4 |
| MS.gene25047.t1 | MTR_2g042450 | 34.177 | 158 | 93 | 4 | 206 | 352 | 203 | 360 | 2.39e-13 | 70.9 |
| MS.gene25047.t1 | MTR_7g018590 | 28.502 | 207 | 121 | 5 | 164 | 350 | 405 | 604 | 9.75e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25047.t1 | AT1G53900 | 78.830 | 359 | 57 | 3 | 9 | 359 | 257 | 604 | 0.0 | 548 |
| MS.gene25047.t1 | AT1G53900 | 78.830 | 359 | 57 | 3 | 9 | 359 | 248 | 595 | 0.0 | 548 |
| MS.gene25047.t1 | AT1G53900 | 78.830 | 359 | 57 | 3 | 9 | 359 | 233 | 580 | 0.0 | 548 |
| MS.gene25047.t1 | AT1G53880 | 78.830 | 359 | 57 | 3 | 9 | 359 | 38 | 385 | 0.0 | 548 |
| MS.gene25047.t1 | AT1G72340 | 75.549 | 364 | 76 | 2 | 3 | 359 | 25 | 382 | 0.0 | 535 |
| MS.gene25047.t1 | AT1G72340 | 76.667 | 360 | 79 | 2 | 3 | 359 | 52 | 409 | 0.0 | 535 |
| MS.gene25047.t1 | AT1G72340 | 74.403 | 293 | 68 | 4 | 3 | 291 | 25 | 314 | 4.86e-144 | 410 |
| MS.gene25047.t1 | AT3G07300 | 34.043 | 188 | 110 | 2 | 174 | 348 | 204 | 390 | 1.53e-20 | 92.4 |
| MS.gene25047.t1 | AT3G07300 | 34.043 | 188 | 110 | 2 | 174 | 348 | 204 | 390 | 1.53e-20 | 92.4 |
| MS.gene25047.t1 | AT3G07300 | 34.043 | 188 | 110 | 2 | 174 | 348 | 206 | 392 | 1.91e-20 | 92.0 |
| MS.gene25047.t1 | AT2G44070 | 29.101 | 189 | 120 | 2 | 176 | 350 | 125 | 313 | 1.53e-16 | 80.1 |
| MS.gene25047.t1 | AT1G48970 | 29.474 | 190 | 118 | 3 | 176 | 350 | 464 | 652 | 8.38e-15 | 76.3 |
| MS.gene25047.t1 | AT5G38640 | 29.101 | 189 | 119 | 5 | 176 | 350 | 441 | 628 | 7.56e-14 | 73.2 |
| MS.gene25047.t1 | AT1G48970 | 34.677 | 124 | 81 | 0 | 176 | 299 | 464 | 587 | 1.25e-13 | 72.4 |
| MS.gene25047.t1 | AT2G05830 | 34.641 | 153 | 87 | 5 | 206 | 346 | 153 | 304 | 3.03e-13 | 70.1 |
| MS.gene25047.t1 | AT2G05830 | 34.641 | 153 | 87 | 5 | 206 | 346 | 153 | 304 | 3.03e-13 | 70.1 |
| MS.gene25047.t1 | AT2G05830 | 34.641 | 153 | 87 | 5 | 206 | 346 | 155 | 306 | 3.29e-13 | 70.1 |
| MS.gene25047.t1 | AT2G05830 | 34.641 | 153 | 87 | 5 | 206 | 346 | 201 | 352 | 4.80e-13 | 70.1 |
Find 99 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATGTGCAGCCAGTTTA+AGG | 0.128134 | 8.1:-77540081 | None:intergenic |
| ATTTGATGGTTGTACCATTT+TGG | 0.189065 | 8.1:+77540027 | MS.gene25047:CDS |
| CATCATTGTAGAAGCTTTAC+TGG | 0.240540 | 8.1:-77538783 | None:intergenic |
| GCCCTACGACCAGTTGATTT+TGG | 0.264394 | 8.1:+77541705 | MS.gene25047:CDS |
| TTCATCGATTACAGAGAAAT+TGG | 0.270252 | 8.1:-77538684 | None:intergenic |
| CACATAATAAGAAGCGCTTT+CGG | 0.273565 | 8.1:+77540095 | MS.gene25047:CDS |
| GATGATGGTAGTGGTGGGTT+GGG | 0.289772 | 8.1:-77538632 | None:intergenic |
| GGAAGCCGTGGCGGCGATTC+GGG | 0.293730 | 8.1:+77538739 | MS.gene25047:CDS |
| CGGAAGCCGTGGCGGCGATT+CGG | 0.305438 | 8.1:+77538738 | MS.gene25047:CDS |
| CTCTGCAGTGGCTTATACTA+TGG | 0.312792 | 8.1:+77541356 | MS.gene25047:CDS |
| CTTTCAGCAGCCACATAAAC+TGG | 0.315944 | 8.1:-77541489 | None:intergenic |
| TTGGTAGTAAGCGGAGATTT+TGG | 0.327121 | 8.1:-77538543 | None:intergenic |
| TTGTAGGCTCGCAAGATTAT+TGG | 0.330457 | 8.1:+77539983 | MS.gene25047:intron |
| GACCGGACCGAACAGGTTTA+AGG | 0.337943 | 8.1:+77541283 | MS.gene25047:CDS |
| GGAAAACCCGTGAACCAAAA+TGG | 0.344608 | 8.1:-77540041 | None:intergenic |
| ACATAATAAGAAGCGCTTTC+GGG | 0.348955 | 8.1:+77540096 | MS.gene25047:CDS |
| ATTGAGCGTGCTGACAAGTT+TGG | 0.352849 | 8.1:+77539857 | MS.gene25047:CDS |
| CCCACTGGACCAAAAGGATT+TGG | 0.356227 | 8.1:+77541677 | MS.gene25047:CDS |
| GGGATGGTTATAAGTATAAC+TGG | 0.361917 | 8.1:-77541854 | None:intergenic |
| GGGCTGGCGCCAAATCCTTT+TGG | 0.361975 | 8.1:-77541686 | None:intergenic |
| TTGAGCGTGCTGACAAGTTT+GGG | 0.369959 | 8.1:+77539858 | MS.gene25047:CDS |
| CGCTTTCGGGTCTTCTGTAC+AGG | 0.373550 | 8.1:+77540109 | MS.gene25047:CDS |
| GCCACGGCTTCCGCCAAATC+AGG | 0.380974 | 8.1:-77538728 | None:intergenic |
| CGAAGTGCGCTAAGCGGGTT+TGG | 0.384500 | 8.1:-77538562 | None:intergenic |
| ATGATGGTAGTGGTGGGTTG+GGG | 0.392348 | 8.1:-77538631 | None:intergenic |
| TGTCTTTGAAGTCCTTAAAC+TGG | 0.395469 | 8.1:+77540069 | MS.gene25047:CDS |
| AGATGATGGTAGTGGTGGGT+TGG | 0.401580 | 8.1:-77538633 | None:intergenic |
| GTGGCGTAATCATCCTGATT+TGG | 0.418718 | 8.1:+77538715 | MS.gene25047:CDS |
| CCTCAACCTTGGATGGAATA+GGG | 0.434396 | 8.1:-77541731 | None:intergenic |
| ATCAAGCTTGGCCAGCTCAT+TGG | 0.435856 | 8.1:-77541310 | None:intergenic |
| ACCTCAACCTTGGATGGAAT+AGG | 0.447224 | 8.1:-77541732 | None:intergenic |
| ATTCTCCATTGATGGAGCTT+CGG | 0.448236 | 8.1:-77538519 | None:intergenic |
| TTGTCACATATCTCATGAAC+AGG | 0.449409 | 8.1:-77539784 | None:intergenic |
| CCCTATTCCATCCAAGGTTG+AGG | 0.453731 | 8.1:+77541731 | MS.gene25047:CDS |
| TGGTGGGTTGGGGTTTGTTG+CGG | 0.455179 | 8.1:-77538621 | None:intergenic |
| TTGAGCTTGTGCTAACCATT+CGG | 0.459143 | 8.1:-77538597 | None:intergenic |
| CGCATGCAAACAAACCTTGT+AGG | 0.466108 | 8.1:-77539888 | None:intergenic |
| GAGGGGAGACCGGACCGAAC+AGG | 0.470708 | 8.1:+77541276 | MS.gene25047:intron |
| TGGTGTCCCTATTCCATCCA+AGG | 0.479552 | 8.1:+77541725 | MS.gene25047:CDS |
| ACCAAAATCAACTGGTCGTA+GGG | 0.491640 | 8.1:-77541706 | None:intergenic |
| AAAAGCAAAGTCAGATATTG+AGG | 0.492181 | 8.1:-77541783 | None:intergenic |
| AAATCAACTGGTCGTAGGGC+TGG | 0.492536 | 8.1:-77541702 | None:intergenic |
| TGGTGGTATAATCAACATGA+TGG | 0.498044 | 8.1:+77541425 | MS.gene25047:CDS |
| CATTCAACCTCAACCTTGGA+TGG | 0.500545 | 8.1:-77541738 | None:intergenic |
| AGCCTTAAACCTGTTCGGTC+CGG | 0.501802 | 8.1:-77541285 | None:intergenic |
| CTGTAATCGATGAATTCAAC+CGG | 0.505693 | 8.1:+77538693 | MS.gene25047:CDS |
| GACACCGAAGTGCGCTAAGC+GGG | 0.505972 | 8.1:-77538567 | None:intergenic |
| TCCTGATTTGGCGGAAGCCG+TGG | 0.506915 | 8.1:+77538727 | MS.gene25047:CDS |
| TGAGAATTTGTTGAAGATGA+TGG | 0.507999 | 8.1:-77538647 | None:intergenic |
| TGGACAGCCTTAAACCTGTT+CGG | 0.508705 | 8.1:-77541290 | None:intergenic |
| GTTTGGGGAAATTTCCTACA+AGG | 0.509909 | 8.1:+77539874 | MS.gene25047:CDS |
| ATAGGGACACCAAAATCAAC+TGG | 0.510136 | 8.1:-77541714 | None:intergenic |
| AGCTCATCACTAACAACTGA+TGG | 0.510348 | 8.1:-77541828 | None:intergenic |
| TCATTACCCACTGGACCAAA+AGG | 0.510368 | 8.1:+77541671 | MS.gene25047:CDS |
| TATGAACAAGCCAGTTTATG+TGG | 0.516266 | 8.1:+77541479 | MS.gene25047:CDS |
| ATTGAGGAGGAGTATAATCT+CGG | 0.519186 | 8.1:-77541767 | None:intergenic |
| TGAGGTAGACATGGTATTGG+TGG | 0.520792 | 8.1:+77541380 | MS.gene25047:CDS |
| TGCCGCTGTTAATGATATAG+AGG | 0.527474 | 8.1:-77539756 | None:intergenic |
| GGAAACCGAAGCTCCATCAA+TGG | 0.533275 | 8.1:+77538514 | MS.gene25047:CDS |
| TTTAAGGCTGTCCAATGAGC+TGG | 0.546787 | 8.1:+77541299 | MS.gene25047:CDS |
| GAGTCTATCACAAGTTTCAC+AGG | 0.547099 | 8.1:-77541336 | None:intergenic |
| GGATGAGGTAGACATGGTAT+TGG | 0.547131 | 8.1:+77541377 | MS.gene25047:CDS |
| AAGGACTTCAAAGACAACTC+TGG | 0.554610 | 8.1:-77540062 | None:intergenic |
| TTGAAGATGATGGTAGTGGT+GGG | 0.562230 | 8.1:-77538637 | None:intergenic |
| TTTCACAGGAACATCAAGCT+TGG | 0.564313 | 8.1:-77541322 | None:intergenic |
| GGTGGTATAATCAACATGAT+GGG | 0.564427 | 8.1:+77541426 | MS.gene25047:CDS |
| TGTGACAAGGACCTCTGCGT+TGG | 0.566354 | 8.1:+77539799 | MS.gene25047:CDS |
| TTTGTTGAAGATGATGGTAG+TGG | 0.568313 | 8.1:-77538641 | None:intergenic |
| TAACTTTGCAGAGGGGAGAC+CGG | 0.569382 | 8.1:+77541266 | MS.gene25047:intron |
| GCAGACGGAGTTGTTGAAAG+TGG | 0.578617 | 8.1:+77541405 | MS.gene25047:CDS |
| AATCAGGATGATTACGCCAC+CGG | 0.580960 | 8.1:-77538712 | None:intergenic |
| AGAGCATTCAACCTCAACCT+TGG | 0.582259 | 8.1:-77541742 | None:intergenic |
| GAGGTAGACATGGTATTGGT+GGG | 0.584464 | 8.1:+77541381 | MS.gene25047:CDS |
| AAGAGCCCGAATCGCCGCCA+CGG | 0.594871 | 8.1:-77538744 | None:intergenic |
| TACTATGGATGAGGTAGACA+TGG | 0.596513 | 8.1:+77541371 | MS.gene25047:CDS |
| GTTTGCTCGTCATTACCCAC+TGG | 0.597584 | 8.1:+77541662 | MS.gene25047:intron |
| GTTGAAGATGATGGTAGTGG+TGG | 0.599162 | 8.1:-77538638 | None:intergenic |
| GACGGAGTTGTTGAAAGTGG+TGG | 0.601192 | 8.1:+77541408 | MS.gene25047:CDS |
| AGTGGCTTATACTATGGATG+AGG | 0.608091 | 8.1:+77541362 | MS.gene25047:CDS |
| CAAACCCGCTTAGCGCACTT+CGG | 0.608864 | 8.1:+77538563 | MS.gene25047:CDS |
| TCGGTGTCGTCAGCACCGAA+TGG | 0.609542 | 8.1:+77538582 | MS.gene25047:CDS |
| TTGAGGAGGAGTATAATCTC+GGG | 0.609746 | 8.1:-77541766 | None:intergenic |
| GCGTAATCATCCTGATTTGG+CGG | 0.609867 | 8.1:+77538718 | MS.gene25047:CDS |
| GGTAGACATGGTATTGGTGG+GGG | 0.616388 | 8.1:+77541383 | MS.gene25047:CDS |
| TGTGGCTGCTGAAAGCTACA+AGG | 0.618798 | 8.1:+77541497 | MS.gene25047:CDS |
| CACCAAAATCAACTGGTCGT+AGG | 0.621091 | 8.1:-77541707 | None:intergenic |
| AGCAAAGTCAGATATTGAGG+AGG | 0.628788 | 8.1:-77541780 | None:intergenic |
| TGATTTGGCGGAAGCCGTGG+CGG | 0.631539 | 8.1:+77538730 | MS.gene25047:CDS |
| AGGTAGACATGGTATTGGTG+GGG | 0.636247 | 8.1:+77541382 | MS.gene25047:CDS |
| GGGGACATATCAAATTGCGT+TGG | 0.643784 | 8.1:+77541446 | MS.gene25047:CDS |
| GTCTTCAAATTCCAACGCAG+AGG | 0.644483 | 8.1:-77539810 | None:intergenic |
| TGAGCGTGCTGACAAGTTTG+GGG | 0.657708 | 8.1:+77539859 | MS.gene25047:CDS |
| GTGGTATAATCAACATGATG+GGG | 0.676081 | 8.1:+77541427 | MS.gene25047:CDS |
| CGACACCGAAGTGCGCTAAG+CGG | 0.678276 | 8.1:-77538568 | None:intergenic |
| TAAGCGGGTTTGGTAGTAAG+CGG | 0.686596 | 8.1:-77538552 | None:intergenic |
| TAATCGATGAATTCAACCGG+TGG | 0.686761 | 8.1:+77538696 | MS.gene25047:CDS |
| AACCTCTATATCATTAACAG+CGG | 0.694809 | 8.1:+77539754 | MS.gene25047:CDS |
| TGTTCATGAGATATGTGACA+AGG | 0.726383 | 8.1:+77539786 | MS.gene25047:CDS |
| ACTTGTGATAGACTCTGCAG+TGG | 0.751791 | 8.1:+77541344 | MS.gene25047:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATTTAAGAAAATAGA+AGG | + | chr8.1:77539055-77539074 | MS.gene25047:intron | 15.0% |
| !!! | TCATATTCATAATCTATTTT+CGG | + | chr8.1:77539449-77539468 | MS.gene25047:intron | 15.0% |
| !! | AACATGATTATGATGTAATA+TGG | + | chr8.1:77541053-77541072 | MS.gene25047:intron | 20.0% |
| !! | GCATGACATTAAATTAAAAA+AGG | - | chr8.1:77538878-77538897 | None:intergenic | 20.0% |
| !! | TAAAACATGATCAAATTAAC+AGG | - | chr8.1:77540952-77540971 | None:intergenic | 20.0% |
| !! | TAGTGTTGTAAAATAATTAG+TGG | + | chr8.1:77539627-77539646 | MS.gene25047:intron | 20.0% |
| !! | TGGATTTCTTATTATTAGTT+TGG | + | chr8.1:77538960-77538979 | MS.gene25047:intron | 20.0% |
| !! | TTCGATATATTATAAGAAGA+GGG | + | chr8.1:77540565-77540584 | MS.gene25047:intron | 20.0% |
| !! | TTGGTTTATGAACATTTATT+TGG | + | chr8.1:77538940-77538959 | MS.gene25047:intron | 20.0% |
| !! | TTTCGATATATTATAAGAAG+AGG | + | chr8.1:77540564-77540583 | MS.gene25047:intron | 20.0% |
| !!! | AGTCAAGATTTTATATTTGA+TGG | + | chr8.1:77540013-77540032 | MS.gene25047:CDS | 20.0% |
| !!! | TTATGAGTTTTAGATAAAAC+AGG | + | chr8.1:77541026-77541045 | MS.gene25047:intron | 20.0% |
| !!! | TTTGTTTGTTTTGTTTTTGT+AGG | + | chr8.1:77539967-77539986 | MS.gene25047:intron | 20.0% |
| ! | AAGTAACTAGACTCATATTT+AGG | + | chr8.1:77540414-77540433 | MS.gene25047:intron | 25.0% |
| ! | AATCTAACATTTATGTTGAC+AGG | + | chr8.1:77539721-77539740 | MS.gene25047:intron | 25.0% |
| ! | ATATCGAAAACCTAAAACAT+TGG | - | chr8.1:77540553-77540572 | None:intergenic | 25.0% |
| ! | ATCACATTAACTGTATGTTT+GGG | - | chr8.1:77540359-77540378 | None:intergenic | 25.0% |
| ! | ATGAAAAATGTCTTCACTTA+TGG | - | chr8.1:77540804-77540823 | None:intergenic | 25.0% |
| ! | ATGTATGTTCATATCTCATT+TGG | - | chr8.1:77539605-77539624 | None:intergenic | 25.0% |
| ! | ATTATGAATATGACCCTATT+TGG | - | chr8.1:77539442-77539461 | None:intergenic | 25.0% |
| ! | ATTGTTCATAAACTTGTCTA+AGG | + | chr8.1:77539221-77539240 | MS.gene25047:intron | 25.0% |
| ! | CATCTCAATTTCATAGTAAT+TGG | + | chr8.1:77540829-77540848 | MS.gene25047:intron | 25.0% |
| ! | CGTGATAAACACTTATTTAT+AGG | - | chr8.1:77539391-77539410 | None:intergenic | 25.0% |
| ! | GATGAAATTCACTATTTGTT+AGG | + | chr8.1:77540376-77540395 | MS.gene25047:intron | 25.0% |
| ! | GTAATATAGAAACTAATCTC+AGG | + | chr8.1:77541104-77541123 | MS.gene25047:intron | 25.0% |
| ! | TATATTATAAGAAGAGGGAA+AGG | + | chr8.1:77540570-77540589 | MS.gene25047:intron | 25.0% |
| ! | TGTATGTTCATATCTCATTT+GGG | - | chr8.1:77539604-77539623 | None:intergenic | 25.0% |
| ! | TTTGAATCACAAATTGGTAA+CGG | - | chr8.1:77541228-77541247 | None:intergenic | 25.0% |
| !! | GTATCTAAAGTTTATCTTGT+AGG | - | chr8.1:77541161-77541180 | None:intergenic | 25.0% |
| !!! | ATAAGTTGTTTCTCCAAATA+GGG | + | chr8.1:77539426-77539445 | MS.gene25047:intron | 25.0% |
| !!! | CAATTTGTTATGTTGAATGT+GGG | + | chr8.1:77539695-77539714 | MS.gene25047:intron | 25.0% |
| !!! | GTTTTAGGATAAGTAAGAAA+AGG | - | chr8.1:77540272-77540291 | None:intergenic | 25.0% |
| !!! | TATAAGTTGTTTCTCCAAAT+AGG | + | chr8.1:77539425-77539444 | MS.gene25047:intron | 25.0% |
| !!! | TCAATTTGTTATGTTGAATG+TGG | + | chr8.1:77539694-77539713 | MS.gene25047:intron | 25.0% |
| !!! | TTTAGGCTTTTTTTAAGAGT+TGG | + | chr8.1:77540431-77540450 | MS.gene25047:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+AGG | - | chr8.1:77539157-77539176 | None:intergenic | 30.0% | |
| AAAAGCAAAGTCAGATATTG+AGG | - | chr8.1:77541786-77541805 | None:intergenic | 30.0% | |
| AAAATAAGCCAATCCAAACA+GGG | - | chr8.1:77539156-77539175 | None:intergenic | 30.0% | |
| AACCTCTATATCATTAACAG+CGG | + | chr8.1:77539754-77539773 | MS.gene25047:CDS | 30.0% | |
| AAGACATTAACGGTTTGATT+GGG | - | chr8.1:77540691-77540710 | None:intergenic | 30.0% | |
| ACAAAGTCGTAAGACATTAA+CGG | - | chr8.1:77540701-77540720 | None:intergenic | 30.0% | |
| ACGAAGTTTGAATCACAAAT+TGG | - | chr8.1:77541234-77541253 | None:intergenic | 30.0% | |
| ACTATTGGGATTCAAACATT+AGG | - | chr8.1:77538906-77538925 | None:intergenic | 30.0% | |
| ACTTCAATTTCCTTATCTCA+TGG | + | chr8.1:77540983-77541002 | MS.gene25047:intron | 30.0% | |
| AGGAAATTGAAGTGACATAA+AGG | - | chr8.1:77540976-77540995 | None:intergenic | 30.0% | |
| ATAGAAATAGTCACGAGAAA+CGG | + | chr8.1:77539006-77539025 | MS.gene25047:intron | 30.0% | |
| ATCAAAACAAACACAGAATG+TGG | - | chr8.1:77539522-77539541 | None:intergenic | 30.0% | |
| CAAAAAAAATCTCCCAAACT+AGG | - | chr8.1:77540508-77540527 | None:intergenic | 30.0% | |
| CATCACATTAACTGTATGTT+TGG | - | chr8.1:77540360-77540379 | None:intergenic | 30.0% | |
| CCTGAAAAATTCATTGAACT+AGG | - | chr8.1:77539475-77539494 | None:intergenic | 30.0% | |
| GTATGTTCATATCTCATTTG+GGG | - | chr8.1:77539603-77539622 | None:intergenic | 30.0% | |
| TAAGACATTAACGGTTTGAT+TGG | - | chr8.1:77540692-77540711 | None:intergenic | 30.0% | |
| TAGGATAAGTAAGAAAAGGT+AGG | - | chr8.1:77540268-77540287 | None:intergenic | 30.0% | |
| TGCTTTGTAGTTTATGACAT+AGG | + | chr8.1:77539110-77539129 | MS.gene25047:intron | 30.0% | |
| TTGATTGTAACTACATGTGT+CGG | + | chr8.1:77539080-77539099 | MS.gene25047:intron | 30.0% | |
| ! | CCTAGTTCAATGAATTTTTC+AGG | + | chr8.1:77539472-77539491 | MS.gene25047:intron | 30.0% |
| ! | GGTTAGCTATTATCAAAACA+AGG | - | chr8.1:77540220-77540239 | None:intergenic | 30.0% |
| ! | TATGGTTTGAAACTAATGTC+AGG | - | chr8.1:77540786-77540805 | None:intergenic | 30.0% |
| ! | TTCATCGATTACAGAGAAAT+TGG | - | chr8.1:77538687-77538706 | None:intergenic | 30.0% |
| !! | ACTTTGCTTTTCACAGATTT+AGG | + | chr8.1:77541795-77541814 | MS.gene25047:CDS | 30.0% |
| !! | ATTATTAGTTTGGCTAGTCT+AGG | + | chr8.1:77538970-77538989 | MS.gene25047:intron | 30.0% |
| !! | ATTTGATGGTTGTACCATTT+TGG | + | chr8.1:77540027-77540046 | MS.gene25047:CDS | 30.0% |
| !! | TGAGAATTTGTTGAAGATGA+TGG | - | chr8.1:77538650-77538669 | None:intergenic | 30.0% |
| !! | TTATGACATAGGTCTTGTTT+GGG | + | chr8.1:77539121-77539140 | MS.gene25047:intron | 30.0% |
| !! | TTTATGACATAGGTCTTGTT+TGG | + | chr8.1:77539120-77539139 | MS.gene25047:intron | 30.0% |
| !!! | CTAGTTTGGGAGATTTTTTT+TGG | + | chr8.1:77540506-77540525 | MS.gene25047:intron | 30.0% |
| !!! | TTTGGGAGATTTTTTTTGGA+GGG | + | chr8.1:77540510-77540529 | MS.gene25047:intron | 30.0% |
| AACAAACAAATAACCACGTC+AGG | - | chr8.1:77539957-77539976 | None:intergenic | 35.0% | |
| AACATTTATGTTGACAGGCA+TGG | + | chr8.1:77539726-77539745 | MS.gene25047:intron | 35.0% | |
| AACTAATGTCAGGAAGTCAA+TGG | - | chr8.1:77540776-77540795 | None:intergenic | 35.0% | |
| ACATTTATGTTGACAGGCAT+GGG | + | chr8.1:77539727-77539746 | MS.gene25047:intron | 35.0% | |
| ACGACTTTGTATCAAGATGT+GGG | + | chr8.1:77540711-77540730 | MS.gene25047:intron | 35.0% | |
| ACTAATGTCAGGAAGTCAAT+GGG | - | chr8.1:77540775-77540794 | None:intergenic | 35.0% | |
| ATCCAAACCAAACACACTAT+TGG | - | chr8.1:77538921-77538940 | None:intergenic | 35.0% | |
| CATCATTGTAGAAGCTTTAC+TGG | - | chr8.1:77538786-77538805 | None:intergenic | 35.0% | |
| CTGTAATCGATGAATTCAAC+CGG | + | chr8.1:77538693-77538712 | MS.gene25047:CDS | 35.0% | |
| GGTACATTTAAGTGACTACA+GGG | - | chr8.1:77539582-77539601 | None:intergenic | 35.0% | |
| GGTGGTATAATCAACATGAT+GGG | + | chr8.1:77541426-77541445 | MS.gene25047:CDS | 35.0% | |
| GTGGTATAATCAACATGATG+GGG | + | chr8.1:77541427-77541446 | MS.gene25047:CDS | 35.0% | |
| TACGACTTTGTATCAAGATG+TGG | + | chr8.1:77540710-77540729 | MS.gene25047:intron | 35.0% | |
| TATGAACAAGCCAGTTTATG+TGG | + | chr8.1:77541479-77541498 | MS.gene25047:CDS | 35.0% | |
| TATTATGTGCAGCCAGTTTA+AGG | - | chr8.1:77540084-77540103 | None:intergenic | 35.0% | |
| TCCAAACCAAACACACTATT+GGG | - | chr8.1:77538920-77538939 | None:intergenic | 35.0% | |
| TGAGTACATGTTTGCACATT+AGG | + | chr8.1:77540162-77540181 | MS.gene25047:intron | 35.0% | |
| TGATAATAGCTAACCGATTG+TGG | + | chr8.1:77540225-77540244 | MS.gene25047:intron | 35.0% | |
| TGGTGGTATAATCAACATGA+TGG | + | chr8.1:77541425-77541444 | MS.gene25047:CDS | 35.0% | |
| TGTTCATGAGATATGTGACA+AGG | + | chr8.1:77539786-77539805 | MS.gene25047:CDS | 35.0% | |
| TTGAATCCCAATAGTGTGTT+TGG | + | chr8.1:77538911-77538930 | MS.gene25047:intron | 35.0% | |
| TTGTCACATATCTCATGAAC+AGG | - | chr8.1:77539787-77539806 | None:intergenic | 35.0% | |
| ! | AGAAAAGGTAGGTTTTCCAT+TGG | - | chr8.1:77540257-77540276 | None:intergenic | 35.0% |
| ! | AGACTCATGACCAATGTTTT+AGG | + | chr8.1:77540540-77540559 | MS.gene25047:intron | 35.0% |
| ! | ATTGAGGAGGAGTATAATCT+CGG | - | chr8.1:77541770-77541789 | None:intergenic | 35.0% |
| ! | TAAATGCGAACCAGTCATTT+TGG | - | chr8.1:77540195-77540214 | None:intergenic | 35.0% |
| ! | TTCCAATGTTTAGAGCTTTG+TGG | + | chr8.1:77540891-77540910 | MS.gene25047:intron | 35.0% |
| ! | TTTGTTGAAGATGATGGTAG+TGG | - | chr8.1:77538644-77538663 | None:intergenic | 35.0% |
| !! | AAATGCGAACCAGTCATTTT+GGG | - | chr8.1:77540194-77540213 | None:intergenic | 35.0% |
| !! | ACATAATAAGAAGCGCTTTC+GGG | + | chr8.1:77540096-77540115 | MS.gene25047:CDS | 35.0% |
| !! | ATAGTGTGTTTGGTTTGGAT+TGG | + | chr8.1:77538921-77538940 | MS.gene25047:intron | 35.0% |
| !! | ATCCACAAAGCTCTAAACAT+TGG | - | chr8.1:77540896-77540915 | None:intergenic | 35.0% |
| !! | CACATAATAAGAAGCGCTTT+CGG | + | chr8.1:77540095-77540114 | MS.gene25047:CDS | 35.0% |
| !! | TGTCTTTGAAGTCCTTAAAC+TGG | + | chr8.1:77540069-77540088 | MS.gene25047:CDS | 35.0% |
| !! | TTTTAAGAGTTGGAAGGTGA+AGG | + | chr8.1:77540441-77540460 | MS.gene25047:intron | 35.0% |
| !!! | ATTTTGGGATTCTCCATTGA+TGG | - | chr8.1:77538530-77538549 | None:intergenic | 35.0% |
| !!! | GGCTTTTTTTAAGAGTTGGA+AGG | + | chr8.1:77540435-77540454 | MS.gene25047:intron | 35.0% |
| !!! | GTTTGGGAGATTTTTTTTGG+AGG | + | chr8.1:77540509-77540528 | MS.gene25047:intron | 35.0% |
| !!! | TTGGGAGATTTTTTTTGGAG+GGG | + | chr8.1:77540511-77540530 | MS.gene25047:intron | 35.0% |
| AAAATCTCCCAAACTAGGTG+AGG | - | chr8.1:77540503-77540522 | None:intergenic | 40.0% | |
| AAATCTCCCAAACTAGGTGA+GGG | - | chr8.1:77540502-77540521 | None:intergenic | 40.0% | |
| AAGGACTTCAAAGACAACTC+TGG | - | chr8.1:77540065-77540084 | None:intergenic | 40.0% | |
| ACCAAAATCAACTGGTCGTA+GGG | - | chr8.1:77541709-77541728 | None:intergenic | 40.0% | |
| ACTCATAACTTTCCCCATAG+AGG | - | chr8.1:77541014-77541033 | None:intergenic | 40.0% | |
| AGAAATCCCTCACCTAGTTT+GGG | + | chr8.1:77540493-77540512 | MS.gene25047:intron | 40.0% | |
| AGCAAAGTCAGATATTGAGG+AGG | - | chr8.1:77541783-77541802 | None:intergenic | 40.0% | |
| AGCTCATCACTAACAACTGA+TGG | - | chr8.1:77541831-77541850 | None:intergenic | 40.0% | |
| AGGATATGTCCCAAAATGAC+TGG | + | chr8.1:77540182-77540201 | MS.gene25047:intron | 40.0% | |
| AGTGGCTTATACTATGGATG+AGG | + | chr8.1:77541362-77541381 | MS.gene25047:CDS | 40.0% | |
| ATAGGGACACCAAAATCAAC+TGG | - | chr8.1:77541717-77541736 | None:intergenic | 40.0% | |
| ATCACATTGAGTCTCAAACG+TGG | - | chr8.1:77540294-77540313 | None:intergenic | 40.0% | |
| ATTCTCCATTGATGGAGCTT+CGG | - | chr8.1:77538522-77538541 | None:intergenic | 40.0% | |
| CCATTGGATCAAACCACAAT+CGG | - | chr8.1:77540241-77540260 | None:intergenic | 40.0% | |
| CTCATAACTTTCCCCATAGA+GGG | - | chr8.1:77541013-77541032 | None:intergenic | 40.0% | |
| GAGTCTATCACAAGTTTCAC+AGG | - | chr8.1:77541339-77541358 | None:intergenic | 40.0% | |
| GGGTACATTTAAGTGACTAC+AGG | - | chr8.1:77539583-77539602 | None:intergenic | 40.0% | |
| GGTTTGATTGGGAGTTGAAA+GGG | - | chr8.1:77540680-77540699 | None:intergenic | 40.0% | |
| GTTTGATTGGGAGTTGAAAG+GGG | - | chr8.1:77540679-77540698 | None:intergenic | 40.0% | |
| GTTTGGGGAAATTTCCTACA+AGG | + | chr8.1:77539874-77539893 | MS.gene25047:CDS | 40.0% | |
| TAACTCTTTCTTACTCCCGA+TGG | + | chr8.1:77539929-77539948 | MS.gene25047:intron | 40.0% | |
| TAATCGATGAATTCAACCGG+TGG | + | chr8.1:77538696-77538715 | MS.gene25047:CDS | 40.0% | |
| TACTATGGATGAGGTAGACA+TGG | + | chr8.1:77541371-77541390 | MS.gene25047:CDS | 40.0% | |
| TCATAACTTTCCCCATAGAG+GGG | - | chr8.1:77541012-77541031 | None:intergenic | 40.0% | |
| TCCCAATAGTGTGTTTGGTT+TGG | + | chr8.1:77538916-77538935 | MS.gene25047:intron | 40.0% | |
| TGCCGCTGTTAATGATATAG+AGG | - | chr8.1:77539759-77539778 | None:intergenic | 40.0% | |
| TTGAGCTTGTGCTAACCATT+CGG | - | chr8.1:77538600-77538619 | None:intergenic | 40.0% | |
| TTGTAGGCTCGCAAGATTAT+TGG | + | chr8.1:77539983-77540002 | MS.gene25047:intron | 40.0% | |
| TTGTATCAAGATGTGGGTTC+AGG | + | chr8.1:77540717-77540736 | MS.gene25047:intron | 40.0% | |
| TTTCACAGGAACATCAAGCT+TGG | - | chr8.1:77541325-77541344 | None:intergenic | 40.0% | |
| ! | AAAGCCTTATCCCACTAAGT+GGG | - | chr8.1:77539339-77539358 | None:intergenic | 40.0% |
| ! | CTGCTAAGTGTTGTACTGAT+TGG | + | chr8.1:77541593-77541612 | MS.gene25047:intron | 40.0% |
| ! | GTTTTGCCTAACTTTGCAGA+GGG | + | chr8.1:77541258-77541277 | MS.gene25047:intron | 40.0% |
| ! | TGAGTCTCAAACGTGGTTTT+AGG | - | chr8.1:77540287-77540306 | None:intergenic | 40.0% |
| ! | TGGTAGTAAGCGGAGATTTT+GGG | - | chr8.1:77538545-77538564 | None:intergenic | 40.0% |
| ! | TGTTTTGCCTAACTTTGCAG+AGG | + | chr8.1:77541257-77541276 | MS.gene25047:intron | 40.0% |
| ! | TTGAGGAGGAGTATAATCTC+GGG | - | chr8.1:77541769-77541788 | None:intergenic | 40.0% |
| ! | TTTTGCCTAACTTTGCAGAG+GGG | + | chr8.1:77541259-77541278 | MS.gene25047:intron | 40.0% |
| !! | AGTGTTGTACTGATTGGCAA+TGG | + | chr8.1:77541599-77541618 | MS.gene25047:intron | 40.0% |
| !! | ATTAGTTTGGCTAGTCTAGG+AGG | + | chr8.1:77538973-77538992 | MS.gene25047:intron | 40.0% |
| !! | TTAGTTTGGCTAGTCTAGGA+GGG | + | chr8.1:77538974-77538993 | MS.gene25047:intron | 40.0% |
| !! | TTGAAGATGATGGTAGTGGT+GGG | - | chr8.1:77538640-77538659 | None:intergenic | 40.0% |
| !! | TTGGTAGTAAGCGGAGATTT+TGG | - | chr8.1:77538546-77538565 | None:intergenic | 40.0% |
| !! | TTTTGAGGGGAAAGAGAGAA+GGG | - | chr8.1:77540641-77540660 | None:intergenic | 40.0% |
| !!! | GGTTGTACCATTTTGGTTCA+CGG | + | chr8.1:77540034-77540053 | MS.gene25047:CDS | 40.0% |
| !!! | GTTGTACCATTTTGGTTCAC+GGG | + | chr8.1:77540035-77540054 | MS.gene25047:CDS | 40.0% |
| AAAGAGAGAAGGGAAGGGAA+GGG | - | chr8.1:77540631-77540650 | None:intergenic | 45.0% | |
| AACACTTAGCAGAATGCTGC+AGG | - | chr8.1:77541585-77541604 | None:intergenic | 45.0% | |
| AATCAGGATGATTACGCCAC+CGG | - | chr8.1:77538715-77538734 | None:intergenic | 45.0% | |
| ACCTCAACCTTGGATGGAAT+AGG | - | chr8.1:77541735-77541754 | None:intergenic | 45.0% | |
| ACTTGTGATAGACTCTGCAG+TGG | + | chr8.1:77541344-77541363 | MS.gene25047:CDS | 45.0% | |
| ATTGGGAGTTGAAAGGGGAT+GGG | - | chr8.1:77540674-77540693 | None:intergenic | 45.0% | |
| CACCAAAATCAACTGGTCGT+AGG | - | chr8.1:77541710-77541729 | None:intergenic | 45.0% | |
| CATTCAACCTCAACCTTGGA+TGG | - | chr8.1:77541741-77541760 | None:intergenic | 45.0% | |
| CCGATTGTGGTTTGATCCAA+TGG | + | chr8.1:77540238-77540257 | MS.gene25047:intron | 45.0% | |
| CCTCAACCTTGGATGGAATA+GGG | - | chr8.1:77541734-77541753 | None:intergenic | 45.0% | |
| CGCATGCAAACAAACCTTGT+AGG | - | chr8.1:77539891-77539910 | None:intergenic | 45.0% | |
| CGGTTTGATTGGGAGTTGAA+AGG | - | chr8.1:77540681-77540700 | None:intergenic | 45.0% | |
| CTCTGCAGTGGCTTATACTA+TGG | + | chr8.1:77541356-77541375 | MS.gene25047:CDS | 45.0% | |
| CTTTCAGCAGCCACATAAAC+TGG | - | chr8.1:77541492-77541511 | None:intergenic | 45.0% | |
| GAGAAATCCCTCACCTAGTT+TGG | + | chr8.1:77540492-77540511 | MS.gene25047:intron | 45.0% | |
| GGAAAACCCGTGAACCAAAA+TGG | - | chr8.1:77540044-77540063 | None:intergenic | 45.0% | |
| GGATGAGGTAGACATGGTAT+TGG | + | chr8.1:77541377-77541396 | MS.gene25047:CDS | 45.0% | |
| GGGGACATATCAAATTGCGT+TGG | + | chr8.1:77541446-77541465 | MS.gene25047:CDS | 45.0% | |
| GTCTTCAAATTCCAACGCAG+AGG | - | chr8.1:77539813-77539832 | None:intergenic | 45.0% | |
| GTGAAGGAAGTAGAGGTCTA+CGG | + | chr8.1:77540457-77540476 | MS.gene25047:intron | 45.0% | |
| GTGGCGTAATCATCCTGATT+TGG | + | chr8.1:77538715-77538734 | MS.gene25047:CDS | 45.0% | |
| TCATTACCCACTGGACCAAA+AGG | + | chr8.1:77541671-77541690 | MS.gene25047:CDS | 45.0% | |
| TGAAGGAAGTAGAGGTCTAC+GGG | + | chr8.1:77540458-77540477 | MS.gene25047:intron | 45.0% | |
| TGACTTAGCCCTGTTTGGAT+TGG | + | chr8.1:77539145-77539164 | MS.gene25047:intron | 45.0% | |
| TGGACAGCCTTAAACCTGTT+CGG | - | chr8.1:77541293-77541312 | None:intergenic | 45.0% | |
| TGTGGGTTCAGGCTCATTAA+TGG | + | chr8.1:77540728-77540747 | MS.gene25047:intron | 45.0% | |
| TTGGAAGGTGAAGGAAGTAG+AGG | + | chr8.1:77540450-77540469 | MS.gene25047:intron | 45.0% | |
| TTTGTTTGCATGCGTGTGGT+TGG | + | chr8.1:77539897-77539916 | MS.gene25047:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr8.1:77539338-77539357 | None:intergenic | 45.0% |
| ! | AAGGTTTGTTTGCATGCGTG+TGG | + | chr8.1:77539893-77539912 | MS.gene25047:intron | 45.0% |
| ! | AGAGCATTCAACCTCAACCT+TGG | - | chr8.1:77541745-77541764 | None:intergenic | 45.0% |
| ! | ATTGAGCGTGCTGACAAGTT+TGG | + | chr8.1:77539857-77539876 | MS.gene25047:CDS | 45.0% |
| ! | CAAAGCCTTATCCCACTAAG+TGG | - | chr8.1:77539340-77539359 | None:intergenic | 45.0% |
| ! | CCAAATCCTTTTGGTCCAGT+GGG | - | chr8.1:77541680-77541699 | None:intergenic | 45.0% |
| ! | TAAGCGGGTTTGGTAGTAAG+CGG | - | chr8.1:77538555-77538574 | None:intergenic | 45.0% |
| ! | TGAGGTAGACATGGTATTGG+TGG | + | chr8.1:77541380-77541399 | MS.gene25047:CDS | 45.0% |
| ! | TTGAGCGTGCTGACAAGTTT+GGG | + | chr8.1:77539858-77539877 | MS.gene25047:CDS | 45.0% |
| ! | TTTAAGGCTGTCCAATGAGC+TGG | + | chr8.1:77541299-77541318 | MS.gene25047:CDS | 45.0% |
| !! | AGGTAGACATGGTATTGGTG+GGG | + | chr8.1:77541382-77541401 | MS.gene25047:CDS | 45.0% |
| !! | GAGGTAGACATGGTATTGGT+GGG | + | chr8.1:77541381-77541400 | MS.gene25047:CDS | 45.0% |
| !! | GCGTAATCATCCTGATTTGG+CGG | + | chr8.1:77538718-77538737 | MS.gene25047:CDS | 45.0% |
| !! | GTTGAAGATGATGGTAGTGG+TGG | - | chr8.1:77538641-77538660 | None:intergenic | 45.0% |
| !!! | GTTTTGAGGGGAAAGAGAGA+AGG | - | chr8.1:77540642-77540661 | None:intergenic | 45.0% |
| AAATCAACTGGTCGTAGGGC+TGG | - | chr8.1:77541705-77541724 | None:intergenic | 50.0% | |
| AAGGAAGTAGAGGTCTACGG+GGG | + | chr8.1:77540460-77540479 | MS.gene25047:intron | 50.0% | |
| AGAGGGGAGACCATGAGATA+AGG | - | chr8.1:77540996-77541015 | None:intergenic | 50.0% | |
| AGCCTTAAACCTGTTCGGTC+CGG | - | chr8.1:77541288-77541307 | None:intergenic | 50.0% | |
| AGGGGAAAGAGAGAAGGGAA+GGG | - | chr8.1:77540636-77540655 | None:intergenic | 50.0% | |
| ATAACCACGTCAGGCACCAT+CGG | - | chr8.1:77539948-77539967 | None:intergenic | 50.0% | |
| ATCAAGCTTGGCCAGCTCAT+TGG | - | chr8.1:77541313-77541332 | None:intergenic | 50.0% | |
| ATCTCATGGTCTCCCCTCTA+TGG | + | chr8.1:77540997-77541016 | MS.gene25047:intron | 50.0% | |
| CCCACTGGACCAAAAGGATT+TGG | + | chr8.1:77541677-77541696 | MS.gene25047:CDS | 50.0% | |
| CCCTATTCCATCCAAGGTTG+AGG | + | chr8.1:77541731-77541750 | MS.gene25047:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr8.1:77539334-77539353 | None:intergenic | 50.0% | |
| GAAAGAGAGAAGGGAAGGGA+AGG | - | chr8.1:77540632-77540651 | None:intergenic | 50.0% | |
| GAAGGAAGTAGAGGTCTACG+GGG | + | chr8.1:77540459-77540478 | MS.gene25047:intron | 50.0% | |
| GACGGAGTTGTTGAAAGTGG+TGG | + | chr8.1:77541408-77541427 | MS.gene25047:CDS | 50.0% | |
| GAGTTGAAAGGGGATGGGAT+GGG | - | chr8.1:77540669-77540688 | None:intergenic | 50.0% | |
| GATTGGGAGTTGAAAGGGGA+TGG | - | chr8.1:77540675-77540694 | None:intergenic | 50.0% | |
| GCAGACGGAGTTGTTGAAAG+TGG | + | chr8.1:77541405-77541424 | MS.gene25047:CDS | 50.0% | |
| GGAAACCGAAGCTCCATCAA+TGG | + | chr8.1:77538514-77538533 | MS.gene25047:CDS | 50.0% | |
| GTTTGCTCGTCATTACCCAC+TGG | + | chr8.1:77541662-77541681 | MS.gene25047:intron | 50.0% | |
| TAACTTTGCAGAGGGGAGAC+CGG | + | chr8.1:77541266-77541285 | MS.gene25047:intron | 50.0% | |
| TCTCATGGTCTCCCCTCTAT+GGG | + | chr8.1:77540998-77541017 | MS.gene25047:intron | 50.0% | |
| TGGTGTCCCTATTCCATCCA+AGG | + | chr8.1:77541725-77541744 | MS.gene25047:CDS | 50.0% | |
| TGTGGCTGCTGAAAGCTACA+AGG | + | chr8.1:77541497-77541516 | MS.gene25047:CDS | 50.0% | |
| ! | GCCAAATCCTTTTGGTCCAG+TGG | - | chr8.1:77541681-77541700 | None:intergenic | 50.0% |
| ! | TGAGCGTGCTGACAAGTTTG+GGG | + | chr8.1:77539859-77539878 | MS.gene25047:CDS | 50.0% |
| ! | TGGGTTGACTTAGCCCTGTT+TGG | + | chr8.1:77539140-77539159 | MS.gene25047:intron | 50.0% |
| !! | AGATGATGGTAGTGGTGGGT+TGG | - | chr8.1:77538636-77538655 | None:intergenic | 50.0% |
| !! | ATGATGGTAGTGGTGGGTTG+GGG | - | chr8.1:77538634-77538653 | None:intergenic | 50.0% |
| !! | GATGATGGTAGTGGTGGGTT+GGG | - | chr8.1:77538635-77538654 | None:intergenic | 50.0% |
| !! | GCCCTACGACCAGTTGATTT+TGG | + | chr8.1:77541705-77541724 | MS.gene25047:CDS | 50.0% |
| !! | GGTAGACATGGTATTGGTGG+GGG | + | chr8.1:77541383-77541402 | MS.gene25047:CDS | 50.0% |
| AAGTAGCCGACCCCACTTAG+TGG | + | chr8.1:77539325-77539344 | MS.gene25047:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACT+TGG | - | chr8.1:77539326-77539345 | None:intergenic | 55.0% | |
| AGAGAAGGGAAGGGAAGGGA+CGG | - | chr8.1:77540627-77540646 | None:intergenic | 55.0% | |
| AGTAGCCGACCCCACTTAGT+GGG | + | chr8.1:77539326-77539345 | MS.gene25047:intron | 55.0% | |
| CAAACCCGCTTAGCGCACTT+CGG | + | chr8.1:77538563-77538582 | MS.gene25047:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr8.1:77539332-77539351 | MS.gene25047:intron | 55.0% | |
| CTAAGTGGGGTCGGCTACTT+GGG | - | chr8.1:77539325-77539344 | None:intergenic | 55.0% | |
| CTCATGGTCTCCCCTCTATG+GGG | + | chr8.1:77540999-77541018 | MS.gene25047:intron | 55.0% | |
| GACCGGACCGAACAGGTTTA+AGG | + | chr8.1:77541283-77541302 | MS.gene25047:CDS | 55.0% | |
| GACTACAGGGCTCATCACAC+AGG | - | chr8.1:77539569-77539588 | None:intergenic | 55.0% | |
| GAGGGGAAAGAGAGAAGGGA+AGG | - | chr8.1:77540637-77540656 | None:intergenic | 55.0% | |
| GGAGTTGAAAGGGGATGGGA+TGG | - | chr8.1:77540670-77540689 | None:intergenic | 55.0% | |
| GGTCTCCCCTCTGCAAAGTT+AGG | - | chr8.1:77541267-77541286 | None:intergenic | 55.0% | |
| TAACCACGTCAGGCACCATC+GGG | - | chr8.1:77539947-77539966 | None:intergenic | 55.0% | |
| TGAAAGGGGATGGGATGGGA+GGG | - | chr8.1:77540665-77540684 | None:intergenic | 55.0% | |
| TGTGACAAGGACCTCTGCGT+TGG | + | chr8.1:77539799-77539818 | MS.gene25047:CDS | 55.0% | |
| TTGAAAGGGGATGGGATGGG+AGG | - | chr8.1:77540666-77540685 | None:intergenic | 55.0% | |
| ! | ATGGGATGGGAGGGGTTTTG+AGG | - | chr8.1:77540656-77540675 | None:intergenic | 55.0% |
| ! | CGCTTTCGGGTCTTCTGTAC+AGG | + | chr8.1:77540109-77540128 | MS.gene25047:CDS | 55.0% |
| !! | ATGGTATTGGTGGGGGCAGA+CGG | + | chr8.1:77541390-77541409 | MS.gene25047:CDS | 55.0% |
| !! | TGGGATGGGAGGGGTTTTGA+GGG | - | chr8.1:77540655-77540674 | None:intergenic | 55.0% |
| !! | TGGTGGGTTGGGGTTTGTTG+CGG | - | chr8.1:77538624-77538643 | None:intergenic | 55.0% |
| AGGGAAGGGAAGGGACGGTT+TGG | - | chr8.1:77540622-77540641 | None:intergenic | 60.0% | |
| CGACACCGAAGTGCGCTAAG+CGG | - | chr8.1:77538571-77538590 | None:intergenic | 60.0% | |
| GAAAGGGGATGGGATGGGAG+GGG | - | chr8.1:77540664-77540683 | None:intergenic | 60.0% | |
| GAAGTAGAGGTCTACGGGGG+AGG | + | chr8.1:77540463-77540482 | MS.gene25047:intron | 60.0% | |
| GACACCGAAGTGCGCTAAGC+GGG | - | chr8.1:77538570-77538589 | None:intergenic | 60.0% | |
| GGGAAGGGAAGGGACGGTTT+GGG | - | chr8.1:77540621-77540640 | None:intergenic | 60.0% | |
| TAGAGGTCTACGGGGGAGGA+GGG | + | chr8.1:77540467-77540486 | MS.gene25047:intron | 60.0% | |
| ! | AAGGGAAGGGACGGTTTGGG+AGG | - | chr8.1:77540618-77540637 | None:intergenic | 60.0% |
| ! | AGGGAAGGGACGGTTTGGGA+GGG | - | chr8.1:77540617-77540636 | None:intergenic | 60.0% |
| ! | CGAAGTGCGCTAAGCGGGTT+TGG | - | chr8.1:77538565-77538584 | None:intergenic | 60.0% |
| ! | TGATTTGGCGGAAGCCGTGG+CGG | + | chr8.1:77538730-77538749 | MS.gene25047:CDS | 60.0% |
| !! | GGGCTGGCGCCAAATCCTTT+TGG | - | chr8.1:77541689-77541708 | None:intergenic | 60.0% |
| !! | TCCTGATTTGGCGGAAGCCG+TGG | + | chr8.1:77538727-77538746 | MS.gene25047:CDS | 60.0% |
| !! | TCGGTGTCGTCAGCACCGAA+TGG | + | chr8.1:77538582-77538601 | MS.gene25047:CDS | 60.0% |
| !!! | GGGATGGGAGGGGTTTTGAG+GGG | - | chr8.1:77540654-77540673 | None:intergenic | 60.0% |
| AAGAGCCCGAATCGCCGCCA+CGG | - | chr8.1:77538747-77538766 | None:intergenic | 65.0% | |
| ACTCCCGATGGTGCCTGACG+TGG | + | chr8.1:77539941-77539960 | MS.gene25047:intron | 65.0% | |
| AGAGGTCTACGGGGGAGGAG+GGG | + | chr8.1:77540468-77540487 | MS.gene25047:intron | 65.0% | |
| GCCACGGCTTCCGCCAAATC+AGG | - | chr8.1:77538731-77538750 | None:intergenic | 65.0% | |
| GTAGAGGTCTACGGGGGAGG+AGG | + | chr8.1:77540466-77540485 | MS.gene25047:intron | 65.0% | |
| CGGAAGCCGTGGCGGCGATT+CGG | + | chr8.1:77538738-77538757 | MS.gene25047:CDS | 70.0% | |
| GAGGGGAGACCGGACCGAAC+AGG | + | chr8.1:77541276-77541295 | MS.gene25047:intron | 70.0% | |
| GGAAGCCGTGGCGGCGATTC+GGG | + | chr8.1:77538739-77538758 | MS.gene25047:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 77538512 | 77541869 | 77538512 | ID=MS.gene25047 |
| chr8.1 | mRNA | 77538512 | 77541869 | 77538512 | ID=MS.gene25047.t1;Parent=MS.gene25047 |
| chr8.1 | exon | 77538512 | 77538847 | 77538512 | ID=MS.gene25047.t1.exon1;Parent=MS.gene25047.t1 |
| chr8.1 | CDS | 77538512 | 77538847 | 77538512 | ID=cds.MS.gene25047.t1;Parent=MS.gene25047.t1 |
| chr8.1 | exon | 77539743 | 77539895 | 77539743 | ID=MS.gene25047.t1.exon2;Parent=MS.gene25047.t1 |
| chr8.1 | CDS | 77539743 | 77539895 | 77539743 | ID=cds.MS.gene25047.t1;Parent=MS.gene25047.t1 |
| chr8.1 | exon | 77539989 | 77540130 | 77539989 | ID=MS.gene25047.t1.exon3;Parent=MS.gene25047.t1 |
| chr8.1 | CDS | 77539989 | 77540130 | 77539989 | ID=cds.MS.gene25047.t1;Parent=MS.gene25047.t1 |
| chr8.1 | exon | 77541277 | 77541518 | 77541277 | ID=MS.gene25047.t1.exon4;Parent=MS.gene25047.t1 |
| chr8.1 | CDS | 77541277 | 77541518 | 77541277 | ID=cds.MS.gene25047.t1;Parent=MS.gene25047.t1 |
| chr8.1 | exon | 77541663 | 77541869 | 77541663 | ID=MS.gene25047.t1.exon5;Parent=MS.gene25047.t1 |
| chr8.1 | CDS | 77541663 | 77541869 | 77541663 | ID=cds.MS.gene25047.t1;Parent=MS.gene25047.t1 |
| Gene Sequence |
| Protein sequence |
