AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25685

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25685.t1 MTR_4g125810 97.466 513 13 0 1 513 1 513 0.0 1038
MS.gene25685.t1 MTR_2g040500 57.570 568 163 12 1 513 1 545 0.0 597
MS.gene25685.t1 MTR_3g104710 46.195 565 236 13 1 513 1 549 3.45e-154 451
MS.gene25685.t1 MTR_1g015110 46.057 558 251 12 1 513 1 553 1.54e-145 429
MS.gene25685.t1 MTR_8g102550 46.984 315 136 5 204 508 100 393 8.78e-88 275
MS.gene25685.t1 MTR_3g068200 45.317 331 131 7 192 504 78 376 1.27e-85 270
MS.gene25685.t1 MTR_5g080680 47.440 293 126 5 205 490 100 371 3.54e-74 240
MS.gene25685.t1 MTR_1g028300 46.224 331 136 8 182 508 92 384 8.81e-74 239
MS.gene25685.t1 MTR_5g009370 44.444 306 131 5 208 503 54 330 7.32e-71 229
MS.gene25685.t1 MTR_5g080680 47.059 204 81 4 205 401 100 283 3.42e-46 163
MS.gene25685.t1 MTR_1g014640 37.299 311 130 10 198 501 69 321 8.58e-45 160
MS.gene25685.t1 MTR_1g013400 37.299 311 130 10 198 501 69 321 8.58e-45 160
MS.gene25685.t1 MTR_5g071550 39.370 254 120 6 253 504 154 375 8.94e-45 162
MS.gene25685.t1 MTR_3g105730 37.086 302 125 10 207 501 35 278 9.39e-45 159
MS.gene25685.t1 MTR_3g105730 37.086 302 125 10 207 501 13 256 1.73e-44 158
MS.gene25685.t1 MTR_3g091060 36.242 298 131 6 208 501 96 338 1.86e-43 158
MS.gene25685.t1 MTR_1g115570 36.149 296 132 8 207 501 96 335 1.98e-43 157
MS.gene25685.t1 MTR_3g464650 34.219 301 146 7 208 504 63 315 2.64e-43 156
MS.gene25685.t1 MTR_3g464700 37.449 243 118 6 208 446 87 299 8.23e-41 150
MS.gene25685.t1 MTR_4g094208 35.599 309 129 11 207 505 30 278 2.06e-37 139
MS.gene25685.t1 MTR_5g071550 41.622 185 92 4 253 435 154 324 2.25e-35 135
MS.gene25685.t1 MTR_2g008850 37.308 260 118 8 250 504 16 235 1.73e-33 127
MS.gene25685.t1 MTR_1g050520 34.084 311 153 12 207 511 388 652 1.00e-32 132
MS.gene25685.t1 MTR_2g008850 36.923 260 119 7 250 504 62 281 1.62e-32 125
MS.gene25685.t1 MTR_3g105880 32.323 297 133 10 207 457 24 298 1.78e-31 124
MS.gene25685.t1 MTR_3g105880 32.759 290 127 10 207 450 24 291 4.81e-31 124
MS.gene25685.t1 MTR_5g063940 36.434 258 123 7 250 504 16 235 5.41e-31 120
MS.gene25685.t1 MTR_3g074610 33.115 305 140 11 207 504 35 282 5.74e-31 121
MS.gene25685.t1 MTR_8g463130 34.962 266 124 9 241 501 58 279 1.02e-30 121
MS.gene25685.t1 MTR_4g094542 37.945 253 113 8 253 501 150 362 1.03e-30 123
MS.gene25685.t1 MTR_2g078760 35.273 275 130 9 238 504 20 254 1.06e-30 120
MS.gene25685.t1 MTR_8g463130 34.962 266 124 9 241 501 30 251 1.28e-30 120
MS.gene25685.t1 MTR_1g014190 32.313 294 133 11 207 455 24 296 1.71e-30 122
MS.gene25685.t1 MTR_5g063940 36.015 261 120 8 250 504 63 282 2.05e-30 120
MS.gene25685.t1 MTR_2g078760 35.273 275 130 9 238 504 99 333 2.26e-30 121
MS.gene25685.t1 MTR_1g014190 32.026 306 141 12 207 467 62 345 3.32e-30 122
MS.gene25685.t1 MTR_4g007440 32.517 286 123 10 207 445 24 286 3.80e-30 121
MS.gene25685.t1 MTR_4g123080 31.159 276 158 9 241 509 100 350 3.83e-30 121
MS.gene25685.t1 MTR_4g123080 31.159 276 158 9 241 509 82 332 5.31e-30 120
MS.gene25685.t1 MTR_2g033000 31.159 276 158 9 241 509 87 337 1.37e-29 120
MS.gene25685.t1 MTR_1g086350 30.508 295 164 10 225 506 86 352 3.47e-29 119
MS.gene25685.t1 MTR_1g086350 30.508 295 164 10 225 506 70 336 4.40e-29 118
MS.gene25685.t1 MTR_4g116420 28.758 306 158 11 214 505 93 352 1.41e-28 117
MS.gene25685.t1 MTR_5g024340 30.916 262 135 9 248 501 120 343 9.03e-28 115
MS.gene25685.t1 MTR_3g107880 31.734 271 136 10 242 501 53 285 2.49e-27 112
MS.gene25685.t1 MTR_3g107880 31.734 271 136 10 242 501 110 342 4.28e-27 113
MS.gene25685.t1 MTR_3g107880 31.734 271 136 10 242 501 111 343 4.39e-27 113
MS.gene25685.t1 MTR_1g086350 31.061 264 145 8 252 506 15 250 1.81e-26 109
MS.gene25685.t1 MTR_2g078760 37.681 207 105 7 238 436 99 289 9.34e-24 101
MS.gene25685.t1 MTR_1g071370 29.392 296 135 10 262 507 171 442 2.50e-23 104
MS.gene25685.t1 MTR_1g110210 29.392 296 153 10 220 503 46 297 6.23e-23 100
MS.gene25685.t1 MTR_7g029240 34.634 205 117 9 249 440 62 262 6.26e-23 101
MS.gene25685.t1 MTR_4g013295 33.761 234 120 8 253 451 78 311 4.13e-22 98.2
MS.gene25685.t1 MTR_3g491830 25.000 332 171 9 207 503 61 349 6.27e-22 98.2
MS.gene25685.t1 MTR_6g081850 30.942 223 121 8 248 448 71 282 1.21e-21 96.3
MS.gene25685.t1 MTR_3g105730 35.897 195 85 6 198 386 26 186 1.81e-21 93.6
MS.gene25685.t1 MTR_1g016620 32.883 222 118 8 253 445 68 287 3.92e-21 95.1
MS.gene25685.t1 MTR_1g083690 34.389 221 117 9 253 445 89 309 1.03e-20 94.0
MS.gene25685.t1 MTR_7g100240 28.516 256 124 7 231 445 54 291 1.24e-20 94.0
MS.gene25685.t1 MTR_1g112840 28.667 300 166 10 185 447 15 303 2.69e-20 93.2
MS.gene25685.t1 MTR_1g106855 30.453 243 113 8 249 448 57 286 3.33e-20 91.7
MS.gene25685.t1 MTR_7g070510 32.759 232 117 9 253 445 92 323 3.35e-20 93.6
MS.gene25685.t1 MTR_1g106855 30.453 243 113 8 249 448 57 286 5.23e-20 92.4
MS.gene25685.t1 MTR_4g120410 33.032 221 120 8 253 445 91 311 9.27e-20 91.3
MS.gene25685.t1 MTR_7g081020 30.472 233 122 7 249 447 72 298 1.33e-19 90.1
MS.gene25685.t1 MTR_3g101540 29.008 262 141 9 254 503 67 295 2.13e-19 90.9
MS.gene25685.t1 MTR_7g081020 30.472 233 122 7 249 447 72 298 2.30e-19 90.5
MS.gene25685.t1 MTR_3g101540 29.008 262 141 9 254 503 67 295 2.33e-19 90.9
MS.gene25685.t1 MTR_7g112490 32.174 230 119 9 253 445 91 320 2.71e-19 90.1
MS.gene25685.t1 MTR_7g112490 32.174 230 119 9 253 445 109 338 3.75e-19 89.7
MS.gene25685.t1 MTR_1g019760 28.244 262 143 8 254 503 66 294 1.58e-18 88.2
MS.gene25685.t1 MTR_1g019760 28.244 262 143 8 254 503 66 294 2.21e-18 87.8
MS.gene25685.t1 MTR_1g116260 29.461 241 114 7 249 447 76 302 2.77e-18 87.0
MS.gene25685.t1 MTR_7g112430 28.625 269 145 8 249 503 62 297 4.10e-18 87.0
MS.gene25685.t1 MTR_1g067210 28.571 245 121 6 242 445 65 296 4.51e-18 86.3
MS.gene25685.t1 MTR_7g090550 28.165 316 157 12 238 503 55 350 6.33e-18 86.7
MS.gene25685.t1 MTR_3g032700 32.159 227 120 7 253 448 68 291 6.39e-18 86.7
MS.gene25685.t1 MTR_2g435550 31.963 219 121 8 255 445 94 312 2.19e-17 84.3
MS.gene25685.t1 MTR_7g090530 28.041 296 147 11 253 501 69 345 2.72e-17 84.7
MS.gene25685.t1 MTR_2g435550 31.818 220 122 8 255 446 94 313 2.91e-17 84.0
MS.gene25685.t1 MTR_2g435550 31.963 219 121 8 255 445 80 298 2.91e-17 83.6
MS.gene25685.t1 MTR_3g032660 31.718 227 121 7 253 448 68 291 3.00e-17 84.3
MS.gene25685.t1 MTR_7g021530 31.250 240 118 8 253 445 38 277 6.47e-17 82.8
MS.gene25685.t1 MTR_7g021530 30.417 240 120 7 253 445 88 327 1.26e-16 82.4
MS.gene25685.t1 MTR_8g074930 28.755 233 126 6 249 447 75 301 1.31e-16 82.0
MS.gene25685.t1 MTR_1g083750 26.351 296 162 9 220 503 46 297 1.80e-16 82.0
MS.gene25685.t1 MTR_4g094208 36.842 152 64 6 251 389 52 184 1.97e-16 78.6
MS.gene25685.t1 MTR_7g021530 31.250 240 118 8 253 445 129 368 2.09e-16 82.0
MS.gene25685.t1 MTR_7g080170 32.243 214 105 8 305 478 76 289 2.92e-16 81.3
MS.gene25685.t1 MTR_2g090190 27.897 233 128 7 253 445 90 322 3.28e-16 81.6
MS.gene25685.t1 MTR_7g080170 29.470 302 137 12 253 478 96 397 4.28e-16 81.3
MS.gene25685.t1 MTR_2g033910 27.778 234 130 5 249 448 71 299 4.63e-16 80.1
MS.gene25685.t1 MTR_5g071550 37.097 124 63 3 253 375 154 263 1.40e-15 77.8
MS.gene25685.t1 MTR_8g017240 33.182 220 119 7 251 445 84 300 2.41e-15 78.2
MS.gene25685.t1 MTR_0015s0140 29.150 247 135 8 232 445 59 298 4.00e-15 77.4
MS.gene25685.t1 MTR_7g060770 26.531 294 167 10 253 505 263 548 2.32e-13 72.8
MS.gene25685.t1 MTR_1g083750 27.826 230 128 6 286 503 2 205 3.69e-13 70.9
MS.gene25685.t1 MTR_4g113480 29.018 224 120 9 253 445 74 289 4.80e-13 72.0
MS.gene25685.t1 MTR_8g074930 31.056 161 77 4 321 447 29 189 2.23e-12 68.2
MS.gene25685.t1 MTR_4g123080 33.113 151 72 6 365 509 110 237 1.40e-11 65.5
MS.gene25685.t1 MTR_4g076560 28.452 239 126 8 241 442 191 421 1.63e-11 67.0
MS.gene25685.t1 MTR_3g032590 34.194 155 71 5 325 448 143 297 2.56e-11 66.2
MS.gene25685.t1 MTR_7g021530 29.825 228 113 8 253 433 88 315 4.08e-11 64.7
MS.gene25685.t1 MTR_7g021530 29.825 228 113 8 253 433 129 356 5.67e-11 64.7
MS.gene25685.t1 MTR_2g078760 34.839 155 79 6 238 386 99 237 6.42e-11 63.5
MS.gene25685.t1 MTR_4g119830 26.230 244 125 8 302 503 257 487 9.61e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25685.t1 AT5G57050 59.659 352 125 8 169 513 80 421 4.11e-140 410
MS.gene25685.t1 AT5G57050 59.659 352 125 8 169 513 40 381 5.53e-140 409
MS.gene25685.t1 AT4G26080 61.728 324 115 3 192 512 114 431 9.57e-140 410
MS.gene25685.t1 AT1G17550 56.571 350 130 3 183 513 165 511 2.87e-135 401
MS.gene25685.t1 AT1G17550 56.571 350 130 3 183 513 165 511 2.87e-135 401
MS.gene25685.t1 AT1G72770 57.307 349 128 3 183 513 166 511 3.89e-135 401
MS.gene25685.t1 AT1G72770 57.307 349 128 3 183 513 166 511 3.89e-135 401
MS.gene25685.t1 AT1G72770 57.307 349 128 3 183 513 166 511 3.89e-135 401
MS.gene25685.t1 AT2G29380 45.872 327 129 10 194 504 67 361 1.51e-84 266
MS.gene25685.t1 AT5G57050 56.250 240 91 7 169 404 80 309 4.53e-82 258
MS.gene25685.t1 AT1G72770 53.390 236 92 2 183 400 166 401 1.57e-77 249
MS.gene25685.t1 AT1G72770 53.390 236 92 2 183 400 166 401 1.57e-77 249
MS.gene25685.t1 AT1G07430 41.520 342 140 6 205 508 119 438 3.95e-76 246
MS.gene25685.t1 AT5G51760 45.370 324 149 4 198 504 70 382 3.02e-75 243
MS.gene25685.t1 AT5G51760 45.370 324 149 4 198 504 100 412 5.51e-75 243
MS.gene25685.t1 AT3G11410 42.994 314 112 8 175 447 56 343 5.65e-73 237
MS.gene25685.t1 AT5G59220 48.837 258 93 4 205 447 110 343 3.64e-71 233
MS.gene25685.t1 AT5G59220 46.919 211 73 4 205 400 110 296 3.95e-49 171
MS.gene25685.t1 AT5G53140 36.242 298 137 7 208 504 103 348 2.41e-45 164
MS.gene25685.t1 AT5G53140 36.242 298 137 7 208 504 103 348 2.41e-45 164
MS.gene25685.t1 AT1G43900 36.066 305 129 10 207 504 124 369 2.48e-45 163
MS.gene25685.t1 AT4G31750 37.086 302 125 9 207 501 34 277 9.32e-45 160
MS.gene25685.t1 AT4G31750 37.086 302 125 9 207 501 34 277 9.32e-45 160
MS.gene25685.t1 AT4G31750 37.086 302 125 9 207 501 34 277 1.29e-44 159
MS.gene25685.t1 AT1G07160 37.458 299 140 7 208 503 122 376 2.11e-44 161
MS.gene25685.t1 AT2G30020 40.157 254 118 6 254 504 171 393 2.20e-44 161
MS.gene25685.t1 AT5G10740 37.086 302 125 10 207 501 34 277 2.50e-44 160
MS.gene25685.t1 AT5G10740 37.086 302 125 10 207 501 34 277 2.50e-44 160
MS.gene25685.t1 AT5G24940 36.656 311 132 11 198 501 25 277 1.86e-43 160
MS.gene25685.t1 AT1G67820 39.044 251 122 7 194 442 72 293 5.62e-42 155
MS.gene25685.t1 AT1G67820 39.044 251 122 7 194 442 108 329 1.51e-41 155
MS.gene25685.t1 AT2G40180 34.169 319 165 8 190 504 109 386 3.15e-41 152
MS.gene25685.t1 AT1G22280 34.091 308 139 12 207 504 34 287 5.71e-35 133
MS.gene25685.t1 AT1G22280 34.426 305 136 12 207 504 34 281 3.69e-33 127
MS.gene25685.t1 AT1G34750 35.385 260 123 7 250 504 63 282 1.75e-32 125
MS.gene25685.t1 AT1G34750 35.385 260 123 7 250 504 63 282 1.75e-32 125
MS.gene25685.t1 AT1G34750 35.385 260 123 7 250 504 63 282 1.75e-32 125
MS.gene25685.t1 AT1G78200 33.333 276 138 8 237 504 1 238 1.24e-31 122
MS.gene25685.t1 AT1G78200 33.333 276 138 8 237 504 1 238 1.24e-31 122
MS.gene25685.t1 AT2G33700 32.296 257 129 6 253 501 123 342 3.07e-31 124
MS.gene25685.t1 AT1G78200 32.188 320 156 10 192 504 18 283 4.29e-31 122
MS.gene25685.t1 AT1G78200 32.188 320 156 10 192 504 18 283 4.29e-31 122
MS.gene25685.t1 AT1G78200 32.188 320 156 10 192 504 18 283 4.29e-31 122
MS.gene25685.t1 AT3G17250 30.241 291 158 8 238 512 141 402 1.17e-30 124
MS.gene25685.t1 AT2G25620 31.046 306 151 10 214 504 97 357 1.22e-30 123
MS.gene25685.t1 AT2G25620 31.046 306 151 10 214 504 97 357 1.22e-30 123
MS.gene25685.t1 AT4G31860 32.646 291 126 11 207 450 24 291 2.47e-30 120
MS.gene25685.t1 AT3G51470 30.851 282 145 9 233 501 37 281 4.69e-30 120
MS.gene25685.t1 AT2G40860 32.268 313 153 12 208 511 296 558 6.54e-30 123
MS.gene25685.t1 AT2G40860 32.268 313 153 12 208 511 394 656 8.65e-30 124
MS.gene25685.t1 AT4G31860 32.646 291 126 11 207 450 24 291 1.09e-29 120
MS.gene25685.t1 AT3G51470 30.142 282 147 9 233 501 81 325 1.25e-29 120
MS.gene25685.t1 AT1G48040 33.588 262 141 8 253 506 116 352 3.60e-29 119
MS.gene25685.t1 AT2G25070 31.615 291 129 11 207 450 24 291 4.73e-29 118
MS.gene25685.t1 AT2G25070 31.615 291 129 11 207 450 24 291 4.73e-29 118
MS.gene25685.t1 AT2G34740 33.212 274 135 9 238 503 101 334 1.64e-28 116
MS.gene25685.t1 AT3G15260 34.231 260 126 8 250 504 70 289 2.82e-28 114
MS.gene25685.t1 AT3G15260 34.231 260 126 8 250 504 70 289 2.82e-28 114
MS.gene25685.t1 AT3G62260 31.907 257 141 7 253 501 27 257 1.22e-27 112
MS.gene25685.t1 AT3G62260 30.314 287 156 8 233 501 86 346 2.25e-27 114
MS.gene25685.t1 AT3G62260 30.314 287 156 8 233 501 87 347 2.27e-27 114
MS.gene25685.t1 AT4G28400 28.803 309 165 10 210 503 14 282 5.39e-27 110
MS.gene25685.t1 AT4G28400 30.657 274 142 9 238 503 27 260 6.35e-27 110
MS.gene25685.t1 AT1G34750 36.816 201 104 6 250 445 63 245 8.44e-27 109
MS.gene25685.t1 AT4G31860 33.091 275 114 11 207 434 24 275 9.82e-27 109
MS.gene25685.t1 AT4G08260 31.481 270 121 7 238 504 1 209 1.69e-25 104
MS.gene25685.t1 AT3G16800 33.333 243 124 9 251 456 91 332 2.77e-25 107
MS.gene25685.t1 AT3G16800 33.333 243 124 9 251 456 91 332 2.77e-25 107
MS.gene25685.t1 AT3G16800 33.333 243 124 9 251 456 91 332 2.77e-25 107
MS.gene25685.t1 AT2G20630 30.515 272 141 9 238 501 45 276 4.02e-25 105
MS.gene25685.t1 AT2G40860 32.540 252 134 10 208 450 394 618 5.25e-25 109
MS.gene25685.t1 AT2G20630 30.627 271 140 9 238 500 45 275 2.44e-24 103
MS.gene25685.t1 AT3G16800 33.193 238 121 9 256 456 1 237 3.59e-24 102
MS.gene25685.t1 AT3G16800 33.193 238 121 9 256 456 1 237 3.59e-24 102
MS.gene25685.t1 AT2G34740 35.071 211 113 7 238 440 97 291 1.15e-23 101
MS.gene25685.t1 AT2G34740 35.545 211 112 8 238 440 115 309 1.31e-23 102
MS.gene25685.t1 AT1G68410 30.405 296 150 10 220 503 51 302 1.61e-23 103
MS.gene25685.t1 AT1G68410 30.405 296 150 10 220 503 51 302 1.61e-23 103
MS.gene25685.t1 AT1G68410 30.405 296 150 10 220 503 51 302 1.61e-23 103
MS.gene25685.t1 AT1G68410 30.405 296 150 10 220 503 51 302 1.61e-23 103
MS.gene25685.t1 AT5G26010 32.618 233 126 8 234 441 52 278 6.68e-23 100
MS.gene25685.t1 AT3G27140 30.116 259 100 3 253 511 19 196 7.11e-23 98.2
MS.gene25685.t1 AT4G28400 30.165 242 138 8 210 436 14 239 1.35e-22 97.4
MS.gene25685.t1 AT5G01700 33.953 215 116 8 253 441 29 243 1.60e-21 96.3
MS.gene25685.t1 AT1G09160 30.153 262 138 8 254 503 69 297 1.98e-21 97.1
MS.gene25685.t1 AT1G09160 30.153 262 138 8 254 503 69 297 1.98e-21 97.1
MS.gene25685.t1 AT5G01700 33.953 215 116 8 253 441 78 292 3.00e-21 95.9
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 3.12e-21 97.4
MS.gene25685.t1 AT1G47380 29.110 292 156 10 229 508 46 298 4.26e-21 96.3
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 7.11e-21 97.1
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.02e-20 96.7
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.02e-20 96.7
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.08e-20 96.7
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.09e-20 96.7
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.09e-20 96.7
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.09e-20 96.7
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.09e-20 96.7
MS.gene25685.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.12e-20 96.7
MS.gene25685.t1 AT3G63320 32.456 228 96 8 324 505 84 299 2.34e-20 93.2
MS.gene25685.t1 AT1G79630 30.651 261 113 8 253 445 28 288 2.55e-20 94.0
MS.gene25685.t1 AT1G79630 30.651 261 113 8 253 445 28 288 2.55e-20 94.0
MS.gene25685.t1 AT4G38520 28.523 298 169 9 185 447 15 303 5.22e-20 92.4
MS.gene25685.t1 AT4G38520 28.523 298 169 9 185 447 15 303 5.22e-20 92.4
MS.gene25685.t1 AT3G63320 32.456 228 96 8 324 505 167 382 6.99e-20 92.4
MS.gene25685.t1 AT1G79630 30.651 261 113 8 253 445 98 358 7.95e-20 92.8
MS.gene25685.t1 AT1G79630 30.651 261 113 8 253 445 94 354 8.78e-20 92.8
MS.gene25685.t1 AT5G02760 30.738 244 115 8 242 445 61 290 1.70e-19 90.5
MS.gene25685.t1 AT4G32950 31.944 216 114 7 255 448 74 278 1.84e-19 89.7
MS.gene25685.t1 AT4G27800 26.190 336 162 10 207 503 60 348 2.04e-19 90.5
MS.gene25685.t1 AT5G27930 32.883 222 120 8 253 445 92 313 2.29e-19 90.5
MS.gene25685.t1 AT5G27930 32.883 222 120 8 253 445 92 313 2.29e-19 90.5
MS.gene25685.t1 AT3G63340 40.123 162 80 7 356 512 340 489 5.76e-19 91.3
MS.gene25685.t1 AT3G12620 29.461 241 110 7 249 445 79 303 9.79e-19 88.6
MS.gene25685.t1 AT3G12620 29.461 241 110 7 249 445 79 303 9.79e-19 88.6
MS.gene25685.t1 AT3G55050 28.179 291 138 9 204 445 36 304 1.80e-18 87.8
MS.gene25685.t1 AT3G55050 28.179 291 138 9 204 445 36 304 1.80e-18 87.8
MS.gene25685.t1 AT3G17090 31.278 227 116 7 253 445 84 304 2.85e-18 86.3
MS.gene25685.t1 AT3G17090 31.278 227 116 7 253 445 84 304 4.06e-18 86.7
MS.gene25685.t1 AT2G05050 29.880 251 96 7 254 504 20 190 4.38e-18 82.8
MS.gene25685.t1 AT1G16220 29.583 240 119 8 255 445 97 335 7.98e-18 86.7
MS.gene25685.t1 AT3G05640 31.944 216 124 7 253 445 93 308 8.86e-18 85.5
MS.gene25685.t1 AT3G05640 31.944 216 124 7 253 445 93 308 8.86e-18 85.5
MS.gene25685.t1 AT3G05640 31.944 216 124 7 253 445 93 308 8.86e-18 85.5
MS.gene25685.t1 AT1G79630 37.267 161 81 5 304 445 89 248 9.10e-18 85.9
MS.gene25685.t1 AT1G79630 37.267 161 81 5 304 445 89 248 9.10e-18 85.9
MS.gene25685.t1 AT1G79630 37.267 161 81 5 304 445 89 248 9.10e-18 85.9
MS.gene25685.t1 AT1G79630 37.267 161 81 5 304 445 89 248 9.10e-18 85.9
MS.gene25685.t1 AT4G03415 27.953 254 136 8 234 445 83 331 1.46e-17 85.9
MS.gene25685.t1 AT4G03415 27.953 254 136 8 234 445 83 331 1.46e-17 85.9
MS.gene25685.t1 AT4G03415 27.953 254 136 8 234 445 83 331 1.46e-17 85.9
MS.gene25685.t1 AT5G06750 28.736 261 128 7 232 448 62 308 2.38e-17 84.3
MS.gene25685.t1 AT5G06750 28.736 261 128 7 232 448 62 308 2.38e-17 84.3
MS.gene25685.t1 AT3G51370 28.571 231 129 6 249 447 75 301 2.52e-17 84.3
MS.gene25685.t1 AT3G51370 28.571 231 129 6 249 447 75 301 2.52e-17 84.3
MS.gene25685.t1 AT5G66080 29.362 235 122 7 249 447 78 304 9.18e-17 82.8
MS.gene25685.t1 AT2G40860 30.131 229 124 10 208 427 394 595 2.52e-16 82.4
MS.gene25685.t1 AT1G03590 28.205 234 129 6 251 445 88 321 4.67e-16 80.9
MS.gene25685.t1 AT4G27800 25.503 298 152 9 207 465 60 326 9.99e-16 79.0
MS.gene25685.t1 AT1G17545 34.965 143 44 5 229 364 78 178 1.46e-15 75.1
MS.gene25685.t1 AT5G36250 29.317 249 123 11 253 448 98 346 6.92e-15 77.4
MS.gene25685.t1 AT4G27800 25.000 292 149 9 207 459 60 320 9.49e-15 75.9
MS.gene25685.t1 AT3G02750 35.000 160 85 6 305 445 193 352 9.56e-15 77.0
MS.gene25685.t1 AT3G02750 35.000 160 85 6 305 445 193 352 9.56e-15 77.0
MS.gene25685.t1 AT5G27930 31.429 210 115 8 253 433 92 301 4.67e-14 73.6
MS.gene25685.t1 AT1G22280 32.275 189 90 9 207 390 34 189 2.37e-13 69.3
MS.gene25685.t1 AT3G51370 32.298 161 75 5 321 447 56 216 9.93e-13 69.3
MS.gene25685.t1 AT5G66080 30.909 165 76 5 319 447 38 200 7.29e-12 66.6
MS.gene25685.t1 AT5G06750 31.447 159 74 4 325 448 68 226 7.33e-12 67.0
MS.gene25685.t1 AT5G36250 27.757 263 123 12 253 448 98 360 8.65e-12 67.8
MS.gene25685.t1 AT3G16560 25.200 250 122 9 253 442 175 419 9.91e-12 67.4
MS.gene25685.t1 AT3G16560 25.200 250 122 9 253 442 175 419 1.09e-11 67.4
MS.gene25685.t1 AT3G16560 25.200 250 122 9 253 442 175 419 1.09e-11 67.4
MS.gene25685.t1 AT3G16560 25.200 250 122 9 253 442 175 419 1.09e-11 67.4

Find 118 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAATTGTGATAGATTTAA+AGG 0.171059 8.1:+6310044 MS.gene25685:CDS
TGATGGGCATGGAGGCTTTC+AGG 0.182963 8.1:+6308478 MS.gene25685:CDS
ATCAAATTTCCAAGTGTAAA+TGG 0.209870 8.1:-6307738 None:intergenic
GAAACAATTGGCAGGAAAAT+TGG 0.260091 8.1:+6308668 MS.gene25685:CDS
CAAGGAAGCGAATCCTTCTT+TGG 0.267654 8.1:+6309890 MS.gene25685:CDS
AACCATCACTTGCTAAAATA+AGG 0.282020 8.1:-6309828 None:intergenic
TGATTGAATGTGGGAGTAAT+TGG 0.283028 8.1:+6307955 MS.gene25685:CDS
TATGTGGGTTTGATTTAAAA+TGG 0.290272 8.1:-6308779 None:intergenic
TTTCAGTGCCTGCATAATTC+AGG 0.301475 8.1:+6308038 MS.gene25685:CDS
CTTTGCACAATATTGACTTC+TGG 0.302547 8.1:-6309787 None:intergenic
TACTCAATTCCAAACCATTC+TGG 0.307215 8.1:-6308292 None:intergenic
AATTGAGTAGTGGCCCTCTA+TGG 0.315879 8.1:+6308306 MS.gene25685:CDS
CGTCCTTTATAGCCTGGTTA+TGG 0.318628 8.1:-6307992 None:intergenic
CTTCTTTGGCACAAGAAGTA+TGG 0.323327 8.1:+6309904 MS.gene25685:CDS
TGAAGCTCGGCAGTCAAGTT+TGG 0.330887 8.1:+6308630 MS.gene25685:CDS
AGAAGAATAGCAGATAGTTT+TGG 0.339478 8.1:-6308227 None:intergenic
TTTAGCAAGTGATGGTTTAT+GGG 0.343067 8.1:+6309834 MS.gene25685:CDS
TGGAAAGGATACAGAGTTCT+TGG 0.348321 8.1:+6309029 MS.gene25685:CDS
GATAACCGGGTTGAAGCTTA+TGG 0.383742 8.1:+6307794 MS.gene25685:CDS
CACATAATTGTTGCAAATTG+TGG 0.384733 8.1:+6308796 MS.gene25685:CDS
CACGGTATCCGCGGAGGTAA+AGG 0.384992 8.1:+6307896 MS.gene25685:CDS
TAGCATAAACGAGGTACTTC+CGG 0.395663 8.1:+6308124 MS.gene25685:CDS
CACAATTTGCAACAATTATG+TGG 0.398808 8.1:-6308795 None:intergenic
ACAACTCATATGGAGATAAC+CGG 0.401599 8.1:+6307780 MS.gene25685:CDS
ATTGAGTAGTGGCCCTCTAT+GGG 0.404588 8.1:+6308307 MS.gene25685:CDS
ACTTGGAAATTTGATTCAAA+AGG 0.416275 8.1:+6307746 MS.gene25685:CDS
ACATAATTGTTGCAAATTGT+GGG 0.422260 8.1:+6308797 MS.gene25685:CDS
AAGCCATAACCAGGCTATAA+AGG 0.423467 8.1:+6307989 MS.gene25685:CDS
TTGATATTAAATCCTGCAGT+TGG 0.427928 8.1:+6307834 MS.gene25685:CDS
GCAGTGGAGCCAGCAGTCTC+AGG 0.434389 8.1:-6308748 None:intergenic
TCACCAACCGTGACGATGAT+TGG 0.437340 8.1:-6308083 None:intergenic
CGAGGTACTTCCGGCACTAA+AGG 0.437574 8.1:+6308133 MS.gene25685:CDS
CTTGAAGATATTTCTTCCAT+TGG 0.442941 8.1:-6307705 None:intergenic
TTCTGCTCGGCCTTTAGTGC+CGG 0.446492 8.1:-6308143 None:intergenic
TGCTGCTGTTACAACTCATA+TGG 0.453647 8.1:+6307770 MS.gene25685:CDS
ATACAGAGTTCTTGGTGTCT+TGG 0.453913 8.1:+6309037 MS.gene25685:CDS
AACAAGCAACCAGAATGGTT+TGG 0.455011 8.1:+6308283 MS.gene25685:CDS
ACAATATTGACTTCTGGTTC+TGG 0.455106 8.1:-6309781 None:intergenic
AGTCCCTTCACAGATGCTAA+TGG 0.459379 8.1:+6308400 MS.gene25685:CDS
TCTGGTTCTGGAATTATCCA+TGG 0.460881 8.1:-6309769 None:intergenic
CTCGCCCTCCACAGAGGAAG+CGG 0.461339 8.1:+6310009 MS.gene25685:CDS
CATACTTCTTGTGCCAAAGA+AGG 0.465903 8.1:-6309903 None:intergenic
TCAAGTTTGGATGAAGCAAA+TGG 0.471498 8.1:+6308643 MS.gene25685:CDS
AAGCAAATGGGAGAAACAAT+TGG 0.477000 8.1:+6308656 MS.gene25685:CDS
TCTCATCGTCCTTTATAGCC+TGG 0.499525 8.1:-6307998 None:intergenic
TTGGTGTCTTGGCCATGTCA+AGG 0.499546 8.1:+6309048 MS.gene25685:CDS
GCCCTCTCATCCTCTCGATT+CGG 0.503961 8.1:-6308972 None:intergenic
TTGCAAATTGTGGGGATTCG+AGG 0.505415 8.1:+6308806 MS.gene25685:CDS
ACTAAAGGCCGAGCAGAATA+CGG 0.508870 8.1:+6308148 MS.gene25685:CDS
CTGTGGAAATAGACCGGAGA+TGG 0.511631 8.1:+6308343 MS.gene25685:CDS
AGTTGGTGCGTCTGTTGTCT+CGG 0.520037 8.1:+6307926 MS.gene25685:CDS
AAATCGAAGCGTGTCAGAAG+AGG 0.522032 8.1:+6308199 MS.gene25685:CDS
CAAGTTTGGATGAAGCAAAT+GGG 0.522079 8.1:+6308644 MS.gene25685:CDS
ACGGTTGGTGATGAGATTCA+TGG 0.523608 8.1:+6308095 MS.gene25685:CDS
GCAACAGCATCTTCCATCTC+CGG 0.529449 8.1:-6308356 None:intergenic
ATCAATCTGTGGAAATAGAC+CGG 0.533852 8.1:+6308337 MS.gene25685:CDS
ACTATTGCTCCTGAGACTGC+TGG 0.535769 8.1:+6308739 MS.gene25685:CDS
TTTGGTGTCTATGATGGGCA+TGG 0.536239 8.1:+6308467 MS.gene25685:CDS
TCGAGGGCTGTCTTGTATCG+TGG 0.542408 8.1:+6308823 MS.gene25685:CDS
CGAGGGCTGTCTTGTATCGT+GGG 0.543022 8.1:+6308824 MS.gene25685:CDS
TTGGCCATGTCAAGGTCCAT+AGG 0.543817 8.1:+6309056 MS.gene25685:CDS
TGCAAATTGTGGGGATTCGA+GGG 0.545554 8.1:+6308807 MS.gene25685:CDS
TTGAGAACAAGCAACCAGAA+TGG 0.553751 8.1:+6308278 MS.gene25685:CDS
AGGGCAAGAATCGAAGCAGC+AGG 0.556886 8.1:+6308990 MS.gene25685:CDS
ACAATTTGCAACAATTATGT+GGG 0.558102 8.1:-6308794 None:intergenic
ATTGAGAGCCTGAATTATGC+AGG 0.559602 8.1:-6308046 None:intergenic
TCTTCTTGATCAGTTGCCAA+AGG 0.560115 8.1:+6308244 MS.gene25685:CDS
AAATGGGAGAAACAATTGGC+AGG 0.562122 8.1:+6308660 MS.gene25685:CDS
CATAATTGTTGCAAATTGTG+GGG 0.563435 8.1:+6308798 MS.gene25685:CDS
AAGAAGCATGTGATATTGCA+AGG 0.565187 8.1:+6309872 MS.gene25685:CDS
GACTGCTGGCTCCACTGCAG+TGG 0.569359 8.1:+6308753 MS.gene25685:CDS
GAATACGGTTTCTGTTGCAA+TGG 0.570314 8.1:+6308163 MS.gene25685:CDS
GTTGCAGTGCCATTTACACT+TGG 0.572388 8.1:+6307729 MS.gene25685:CDS
GAGGTAAAGGAGAATCAAGT+TGG 0.572537 8.1:+6307909 MS.gene25685:CDS
AACAGAAACCGTATTCTGCT+CGG 0.575565 8.1:-6308156 None:intergenic
TCTACACTCAGCGTTGATTG+AGG 0.579519 8.1:+6308603 MS.gene25685:CDS
TTGATGAGAAACCCCATAGA+GGG 0.580491 8.1:-6308319 None:intergenic
GCCGAATCGAGAGGATGAGA+GGG 0.580620 8.1:+6308971 MS.gene25685:intron
CAGGAGGAAGAGTCATACAT+TGG 0.580820 8.1:+6309009 MS.gene25685:CDS
CTTGAGTGAAAGCCATAACC+AGG 0.583606 8.1:+6307980 MS.gene25685:CDS
ATCGCCGCTTCCTCTGTGGA+GGG 0.585497 8.1:-6310013 None:intergenic
ATTGATGAGAAACCCCATAG+AGG 0.590904 8.1:-6308320 None:intergenic
GTGATAGATACTTGAAACCA+TGG 0.595760 8.1:+6309752 MS.gene25685:CDS
TAAAATGGCAACCACTGCAG+TGG 0.596316 8.1:-6308764 None:intergenic
CATACCTATGGACCTTGACA+TGG 0.597500 8.1:-6309060 None:intergenic
TCGGAAATGTTGATTGAATG+TGG 0.599725 8.1:+6307945 MS.gene25685:CDS
TATCGCCGCTTCCTCTGTGG+AGG 0.600276 8.1:-6310014 None:intergenic
CGATGAGATCATGTTAGCTG+TGG 0.601298 8.1:+6308013 MS.gene25685:CDS
AGCCGAATCGAGAGGATGAG+AGG 0.601648 8.1:+6308970 MS.gene25685:intron
TGTTATCGCCGCTTCCTCTG+TGG 0.606503 8.1:-6310017 None:intergenic
CAACTCATATGGAGATAACC+GGG 0.606916 8.1:+6307781 MS.gene25685:CDS
GTGGTCAGAAGACAACGCTA+TGG 0.607535 8.1:-6308854 None:intergenic
ACAGTACTTGACAAAGGAGA+AGG 0.608657 8.1:+6309940 MS.gene25685:CDS
TTGAGTAGTGGCCCTCTATG+GGG 0.609354 8.1:+6308308 MS.gene25685:CDS
TCATCCATTAGCATCTGTGA+AGG 0.613517 8.1:-6308404 None:intergenic
TCACCAATCATCGTCACGGT+TGG 0.616215 8.1:+6308080 MS.gene25685:CDS
GGAAGAGTCATACATTGGAA+AGG 0.617081 8.1:+6309014 MS.gene25685:CDS
TGGGGTTTCTCATCAATCTG+TGG 0.622774 8.1:+6308326 MS.gene25685:CDS
CATCCATTAGCATCTGTGAA+GGG 0.623872 8.1:-6308403 None:intergenic
TAATTCAGGCTCTCAATCTG+TGG 0.624297 8.1:+6308052 MS.gene25685:CDS
AATGGTTTGGAATTGAGTAG+TGG 0.634780 8.1:+6308296 MS.gene25685:CDS
CGGAAATGTTGATTGAATGT+GGG 0.636981 8.1:+6307946 MS.gene25685:CDS
GTACTTGACAAAGGAGAAGG+AGG 0.638743 8.1:+6309943 MS.gene25685:CDS
GCAAGAATCGAAGCAGCAGG+AGG 0.645246 8.1:+6308993 MS.gene25685:CDS
GTTGAAGACTAACATCAGCA+TGG 0.646810 8.1:-6307866 None:intergenic
TCAGATCACGGTATCCGCGG+AGG 0.649352 8.1:+6307890 MS.gene25685:CDS
TGATTGAGGAGATTGAAGCT+CGG 0.650060 8.1:+6308617 MS.gene25685:CDS
ATTTGCCATAAGCTTCAACC+CGG 0.654249 8.1:-6307799 None:intergenic
CACAAGAAGTATGGTGACAA+CGG 0.654302 8.1:+6309913 MS.gene25685:CDS
ACATCAGATCACGGTATCCG+CGG 0.656186 8.1:+6307887 MS.gene25685:CDS
AGATTCACCAATCATCGTCA+CGG 0.661305 8.1:+6308076 MS.gene25685:CDS
TAGTCTTCAACATCAGATCA+CGG 0.669945 8.1:+6307878 MS.gene25685:CDS
TTGATTCTCCTTTACCTCCG+CGG 0.675182 8.1:-6307904 None:intergenic
GGTGTCTATGATGGGCATGG+AGG 0.675725 8.1:+6308470 MS.gene25685:CDS
GGAGCAACAGTACTTGACAA+AGG 0.702207 8.1:+6309934 MS.gene25685:CDS
TCTAAACTCGCCCTCCACAG+AGG 0.709645 8.1:+6310003 MS.gene25685:CDS
TGGTAAGTTTAGCATAAACG+AGG 0.709809 8.1:+6308115 MS.gene25685:CDS
GAGTTTAGATAGATACTCTG+CGG 0.743383 8.1:-6309989 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAGTTTTAAGAAAGAA+AGG + chr8.1:6309264-6309283 MS.gene25685:intron 15.0%
!! AAAAATATTATAGTGCATCA+TGG + chr8.1:6309552-6309571 MS.gene25685:intron 20.0%
!! ATTAATCTCAATTACTGATA+TGG - chr8.1:6309707-6309726 None:intergenic 20.0%
!! CAAATTGTATGATTTGATTA+AGG - chr8.1:6308510-6308529 None:intergenic 20.0%
!! TGTAATTGTGATAGATTTAA+AGG + chr8.1:6310044-6310063 MS.gene25685:CDS 20.0%
!! TTAATCTCAATTACTGATAT+GGG - chr8.1:6309706-6309725 None:intergenic 20.0%
!!! ACAATTGTTAGTTTATTGAT+AGG + chr8.1:6309302-6309321 MS.gene25685:intron 20.0%
!!! ATTTTGTGTTTTCATTCAAA+TGG - chr8.1:6308430-6308449 None:intergenic 20.0%
! AAAGAATATATCCTATCCAA+AGG - chr8.1:6309422-6309441 None:intergenic 25.0%
! AACAAGTTTATGATATCCAA+AGG - chr8.1:6309633-6309652 None:intergenic 25.0%
! ACAATTTGCAACAATTATGT+GGG - chr8.1:6308797-6308816 None:intergenic 25.0%
! ACATAATTGTTGCAAATTGT+GGG + chr8.1:6308797-6308816 MS.gene25685:CDS 25.0%
! ACTTGGAAATTTGATTCAAA+AGG + chr8.1:6307746-6307765 MS.gene25685:CDS 25.0%
! AGTTTCCTTTATTCAGAAAA+TGG + chr8.1:6309577-6309596 MS.gene25685:intron 25.0%
! ATCAAATTTCCAAGTGTAAA+TGG - chr8.1:6307741-6307760 None:intergenic 25.0%
! TAATCTCAATTACTGATATG+GGG - chr8.1:6309705-6309724 None:intergenic 25.0%
! TCTATTCAGTTTGGTATTAA+GGG + chr8.1:6309139-6309158 MS.gene25685:intron 25.0%
!! TATGTGGGTTTGATTTAAAA+TGG - chr8.1:6308782-6308801 None:intergenic 25.0%
!! TTCTTTTAATCAGTATCTCA+AGG + chr8.1:6309339-6309358 MS.gene25685:intron 25.0%
!! TTTTTCTGTTCCAAAGTTAT+GGG - chr8.1:6309366-6309385 None:intergenic 25.0%
!!! ATTTTTTTGGTGTCTATGAT+GGG + chr8.1:6308462-6308481 MS.gene25685:CDS 25.0%
!!! TTAAGCCATTTTCTGAATAA+AGG - chr8.1:6309585-6309604 None:intergenic 25.0%
AGTTTATTGATAGGAATTCG+TGG + chr8.1:6309311-6309330 MS.gene25685:intron 30.0%
CACAATTTGCAACAATTATG+TGG - chr8.1:6308798-6308817 None:intergenic 30.0%
CACATAATTGTTGCAAATTG+TGG + chr8.1:6308796-6308815 MS.gene25685:CDS 30.0%
CATAATTGTTGCAAATTGTG+GGG + chr8.1:6308798-6308817 MS.gene25685:CDS 30.0%
CATCATAGACACCAAAAAAA+TGG - chr8.1:6308463-6308482 None:intergenic 30.0%
CTATTCAGTTTGGTATTAAG+GGG + chr8.1:6309140-6309159 MS.gene25685:intron 30.0%
CTCTATTCAGTTTGGTATTA+AGG + chr8.1:6309138-6309157 MS.gene25685:intron 30.0%
TTGATATTAAATCCTGCAGT+TGG + chr8.1:6307834-6307853 MS.gene25685:CDS 30.0%
TTTAGCAAGTGATGGTTTAT+GGG + chr8.1:6309834-6309853 MS.gene25685:CDS 30.0%
! AACCATCACTTGCTAAAATA+AGG - chr8.1:6309831-6309850 None:intergenic 30.0%
! AGAAGAATAGCAGATAGTTT+TGG - chr8.1:6308230-6308249 None:intergenic 30.0%
! CTTTTTCTGTTCCAAAGTTA+TGG - chr8.1:6309367-6309386 None:intergenic 30.0%
! TCTTATTGTCTTGTTCAAAC+AGG + chr8.1:6309730-6309749 MS.gene25685:intron 30.0%
! TTTTAGCAAGTGATGGTTTA+TGG + chr8.1:6309833-6309852 MS.gene25685:CDS 30.0%
!! TGCAGTTTTTAACTCAAACA+AGG - chr8.1:6309673-6309692 None:intergenic 30.0%
!!! CAAACGTTTTTTGCTGAATA+GGG + chr8.1:6309187-6309206 MS.gene25685:intron 30.0%
!!! CATTTTTTTGGTGTCTATGA+TGG + chr8.1:6308461-6308480 MS.gene25685:CDS 30.0%
!!! TATCCACAAGTCCATTTTTT+TGG + chr8.1:6308449-6308468 MS.gene25685:CDS 30.0%
!!! TCAAACGTTTTTTGCTGAAT+AGG + chr8.1:6309186-6309205 MS.gene25685:intron 30.0%
AAAGGCTGAAATCACATTCA+AGG - chr8.1:6309404-6309423 None:intergenic 35.0%
AAGCAAATGGGAGAAACAAT+TGG + chr8.1:6308656-6308675 MS.gene25685:CDS 35.0%
ACAACTCATATGGAGATAAC+CGG + chr8.1:6307780-6307799 MS.gene25685:CDS 35.0%
ATCAATCTGTGGAAATAGAC+CGG + chr8.1:6308337-6308356 MS.gene25685:CDS 35.0%
ATGCAACAGATACATACCTA+TGG - chr8.1:6309075-6309094 None:intergenic 35.0%
CAAGTTTGGATGAAGCAAAT+GGG + chr8.1:6308644-6308663 MS.gene25685:CDS 35.0%
CTATGAAATGCCTTACTTTG+TGG - chr8.1:6308876-6308895 None:intergenic 35.0%
GAAACAATTGGCAGGAAAAT+TGG + chr8.1:6308668-6308687 MS.gene25685:CDS 35.0%
GAGTTTAGATAGATACTCTG+CGG - chr8.1:6309992-6310011 None:intergenic 35.0%
GCATGTTACTCTATTCAGTT+TGG + chr8.1:6309130-6309149 MS.gene25685:intron 35.0%
GTATGTATCTGTTGCATGAT+TGG + chr8.1:6309078-6309097 MS.gene25685:intron 35.0%
GTGATAGATACTTGAAACCA+TGG + chr8.1:6309752-6309771 MS.gene25685:CDS 35.0%
TACTCAATTCCAAACCATTC+TGG - chr8.1:6308295-6308314 None:intergenic 35.0%
TAGTCTTCAACATCAGATCA+CGG + chr8.1:6307878-6307897 MS.gene25685:CDS 35.0%
TCAAGTTTGGATGAAGCAAA+TGG + chr8.1:6308643-6308662 MS.gene25685:CDS 35.0%
TGATTGAATGTGGGAGTAAT+TGG + chr8.1:6307955-6307974 MS.gene25685:CDS 35.0%
TGGTAAGTTTAGCATAAACG+AGG + chr8.1:6308115-6308134 MS.gene25685:CDS 35.0%
TTGAATGTGATTTCAGCCTT+TGG + chr8.1:6309403-6309422 MS.gene25685:intron 35.0%
! AAGAAGCATGTGATATTGCA+AGG + chr8.1:6309872-6309891 MS.gene25685:CDS 35.0%
! AATGGTTTGGAATTGAGTAG+TGG + chr8.1:6308296-6308315 MS.gene25685:CDS 35.0%
! ACACCAAAAAAATGGACTTG+TGG - chr8.1:6308455-6308474 None:intergenic 35.0%
! CGGAAATGTTGATTGAATGT+GGG + chr8.1:6307946-6307965 MS.gene25685:CDS 35.0%
! TCGGAAATGTTGATTGAATG+TGG + chr8.1:6307945-6307964 MS.gene25685:CDS 35.0%
!! ACAATATTGACTTCTGGTTC+TGG - chr8.1:6309784-6309803 None:intergenic 35.0%
!! CTCAATGTTTTGTTCTCCTT+TGG - chr8.1:6308263-6308282 None:intergenic 35.0%
!! CTTTGCACAATATTGACTTC+TGG - chr8.1:6309790-6309809 None:intergenic 35.0%
!!! GAGAGTGTTTTGTTTCTGAT+AGG + chr8.1:6308558-6308577 MS.gene25685:intron 35.0%
!!! TGCCTTATTTTAGCAAGTGA+TGG + chr8.1:6309826-6309845 MS.gene25685:CDS 35.0%
AAATGGGAGAAACAATTGGC+AGG + chr8.1:6308660-6308679 MS.gene25685:CDS 40.0%
AACAAGCAACCAGAATGGTT+TGG + chr8.1:6308283-6308302 MS.gene25685:CDS 40.0%
AACAGAAACCGTATTCTGCT+CGG - chr8.1:6308159-6308178 None:intergenic 40.0%
AAGCCATAACCAGGCTATAA+AGG + chr8.1:6307989-6308008 MS.gene25685:CDS 40.0%
ACAGTACTTGACAAAGGAGA+AGG + chr8.1:6309940-6309959 MS.gene25685:CDS 40.0%
AGATTCACCAATCATCGTCA+CGG + chr8.1:6308076-6308095 MS.gene25685:CDS 40.0%
ATCTCAAGGACCCATAACTT+TGG + chr8.1:6309353-6309372 MS.gene25685:intron 40.0%
ATTATGTCAGACGCTGAAGT+TGG + chr8.1:6308917-6308936 MS.gene25685:intron 40.0%
ATTGAGAGCCTGAATTATGC+AGG - chr8.1:6308049-6308068 None:intergenic 40.0%
ATTGATGAGAAACCCCATAG+AGG - chr8.1:6308323-6308342 None:intergenic 40.0%
ATTTGCCATAAGCTTCAACC+CGG - chr8.1:6307802-6307821 None:intergenic 40.0%
CAACTCATATGGAGATAACC+GGG + chr8.1:6307781-6307800 MS.gene25685:CDS 40.0%
CATACTTCTTGTGCCAAAGA+AGG - chr8.1:6309906-6309925 None:intergenic 40.0%
CATCCATTAGCATCTGTGAA+GGG - chr8.1:6308406-6308425 None:intergenic 40.0%
CTTCTTTGGCACAAGAAGTA+TGG + chr8.1:6309904-6309923 MS.gene25685:CDS 40.0%
GAATACGGTTTCTGTTGCAA+TGG + chr8.1:6308163-6308182 MS.gene25685:CDS 40.0%
GAGGTAAAGGAGAATCAAGT+TGG + chr8.1:6307909-6307928 MS.gene25685:CDS 40.0%
GGAAGAGTCATACATTGGAA+AGG + chr8.1:6309014-6309033 MS.gene25685:CDS 40.0%
GTTGAAGACTAACATCAGCA+TGG - chr8.1:6307869-6307888 None:intergenic 40.0%
TAATTCAGGCTCTCAATCTG+TGG + chr8.1:6308052-6308071 MS.gene25685:CDS 40.0%
TCATCCATTAGCATCTGTGA+AGG - chr8.1:6308407-6308426 None:intergenic 40.0%
TCTTCTTGATCAGTTGCCAA+AGG + chr8.1:6308244-6308263 MS.gene25685:CDS 40.0%
TGATTGAGGAGATTGAAGCT+CGG + chr8.1:6308617-6308636 MS.gene25685:CDS 40.0%
TGCTGCTGTTACAACTCATA+TGG + chr8.1:6307770-6307789 MS.gene25685:CDS 40.0%
TGGAAAGGATACAGAGTTCT+TGG + chr8.1:6309029-6309048 MS.gene25685:CDS 40.0%
TGTCTTCTGACCACAAAGTA+AGG + chr8.1:6308863-6308882 MS.gene25685:intron 40.0%
TGTGATTTCAGCCTTTGGAT+AGG + chr8.1:6309408-6309427 MS.gene25685:intron 40.0%
TTGAGAACAAGCAACCAGAA+TGG + chr8.1:6308278-6308297 MS.gene25685:CDS 40.0%
TTGATGAGAAACCCCATAGA+GGG - chr8.1:6308322-6308341 None:intergenic 40.0%
TTTCAGTGCCTGCATAATTC+AGG + chr8.1:6308038-6308057 MS.gene25685:CDS 40.0%
! CACAAGAAGTATGGTGACAA+CGG + chr8.1:6309913-6309932 MS.gene25685:CDS 40.0%
! TAGCATAAACGAGGTACTTC+CGG + chr8.1:6308124-6308143 MS.gene25685:CDS 40.0%
! TGGTTTTCATTTCCAACTGC+AGG - chr8.1:6307849-6307868 None:intergenic 40.0%
! TTTTTGCTGAATAGGGACAC+AGG + chr8.1:6309194-6309213 MS.gene25685:intron 40.0%
!! ATACAGAGTTCTTGGTGTCT+TGG + chr8.1:6309037-6309056 MS.gene25685:CDS 40.0%
!! TCTGGTTCTGGAATTATCCA+TGG - chr8.1:6309772-6309791 None:intergenic 40.0%
AAATCGAAGCGTGTCAGAAG+AGG + chr8.1:6308199-6308218 MS.gene25685:CDS 45.0%
AATTGAGTAGTGGCCCTCTA+TGG + chr8.1:6308306-6308325 MS.gene25685:CDS 45.0%
ACTAAAGGCCGAGCAGAATA+CGG + chr8.1:6308148-6308167 MS.gene25685:CDS 45.0%
AGTCCCTTCACAGATGCTAA+TGG + chr8.1:6308400-6308419 MS.gene25685:CDS 45.0%
ATTGAGTAGTGGCCCTCTAT+GGG + chr8.1:6308307-6308326 MS.gene25685:CDS 45.0%
CAAGGAAGCGAATCCTTCTT+TGG + chr8.1:6309890-6309909 MS.gene25685:CDS 45.0%
CAGGAGGAAGAGTCATACAT+TGG + chr8.1:6309009-6309028 MS.gene25685:CDS 45.0%
CATACCTATGGACCTTGACA+TGG - chr8.1:6309063-6309082 None:intergenic 45.0%
CGATGAGATCATGTTAGCTG+TGG + chr8.1:6308013-6308032 MS.gene25685:CDS 45.0%
CGTCCTTTATAGCCTGGTTA+TGG - chr8.1:6307995-6308014 None:intergenic 45.0%
CTTGAGTGAAAGCCATAACC+AGG + chr8.1:6307980-6307999 MS.gene25685:CDS 45.0%
GAAGGGACTTGAAAAAGCTG+AGG - chr8.1:6308389-6308408 None:intergenic 45.0%
GGAGCAACAGTACTTGACAA+AGG + chr8.1:6309934-6309953 MS.gene25685:CDS 45.0%
GTACTTGACAAAGGAGAAGG+AGG + chr8.1:6309943-6309962 MS.gene25685:CDS 45.0%
TAAAATGGCAACCACTGCAG+TGG - chr8.1:6308767-6308786 None:intergenic 45.0%
TCTCATCGTCCTTTATAGCC+TGG - chr8.1:6308001-6308020 None:intergenic 45.0%
TGCAAATTGTGGGGATTCGA+GGG + chr8.1:6308807-6308826 MS.gene25685:CDS 45.0%
TGGGGTTTCTCATCAATCTG+TGG + chr8.1:6308326-6308345 MS.gene25685:CDS 45.0%
TTGATTCTCCTTTACCTCCG+CGG - chr8.1:6307907-6307926 None:intergenic 45.0%
TTGCAAATTGTGGGGATTCG+AGG + chr8.1:6308806-6308825 MS.gene25685:CDS 45.0%
! GATAACCGGGTTGAAGCTTA+TGG + chr8.1:6307794-6307813 MS.gene25685:CDS 45.0%
!! ACGGTTGGTGATGAGATTCA+TGG + chr8.1:6308095-6308114 MS.gene25685:CDS 45.0%
!! GTTGCAGTGCCATTTACACT+TGG + chr8.1:6307729-6307748 MS.gene25685:CDS 45.0%
!! TCTACACTCAGCGTTGATTG+AGG + chr8.1:6308603-6308622 MS.gene25685:CDS 45.0%
!! TTTGGTGTCTATGATGGGCA+TGG + chr8.1:6308467-6308486 MS.gene25685:CDS 45.0%
ACATCAGATCACGGTATCCG+CGG + chr8.1:6307887-6307906 MS.gene25685:CDS 50.0%
ACTATTGCTCCTGAGACTGC+TGG + chr8.1:6308739-6308758 MS.gene25685:CDS 50.0%
CTGTGGAAATAGACCGGAGA+TGG + chr8.1:6308343-6308362 MS.gene25685:CDS 50.0%
GCAACAGCATCTTCCATCTC+CGG - chr8.1:6308359-6308378 None:intergenic 50.0%
GTGGTCAGAAGACAACGCTA+TGG - chr8.1:6308857-6308876 None:intergenic 50.0%
TCACCAACCGTGACGATGAT+TGG - chr8.1:6308086-6308105 None:intergenic 50.0%
TCACCAATCATCGTCACGGT+TGG + chr8.1:6308080-6308099 MS.gene25685:CDS 50.0%
TGAAGCTCGGCAGTCAAGTT+TGG + chr8.1:6308630-6308649 MS.gene25685:CDS 50.0%
TTGAGTAGTGGCCCTCTATG+GGG + chr8.1:6308308-6308327 MS.gene25685:CDS 50.0%
TTGGCCATGTCAAGGTCCAT+AGG + chr8.1:6309056-6309075 MS.gene25685:CDS 50.0%
! ACTTTTGCAGCCGAATCGAG+AGG + chr8.1:6308962-6308981 MS.gene25685:intron 50.0%
! AGTTGGTGCGTCTGTTGTCT+CGG + chr8.1:6307926-6307945 MS.gene25685:CDS 50.0%
! TTGGTGTCTTGGCCATGTCA+AGG + chr8.1:6309048-6309067 MS.gene25685:CDS 50.0%
AGCCGAATCGAGAGGATGAG+AGG + chr8.1:6308970-6308989 MS.gene25685:intron 55.0%
AGGGCAAGAATCGAAGCAGC+AGG + chr8.1:6308990-6309009 MS.gene25685:CDS 55.0%
CGAGGGCTGTCTTGTATCGT+GGG + chr8.1:6308824-6308843 MS.gene25685:CDS 55.0%
GCAAGAATCGAAGCAGCAGG+AGG + chr8.1:6308993-6309012 MS.gene25685:CDS 55.0%
GCCCTCTCATCCTCTCGATT+CGG - chr8.1:6308975-6308994 None:intergenic 55.0%
GCCGAATCGAGAGGATGAGA+GGG + chr8.1:6308971-6308990 MS.gene25685:intron 55.0%
TCGAGGGCTGTCTTGTATCG+TGG + chr8.1:6308823-6308842 MS.gene25685:CDS 55.0%
TCTAAACTCGCCCTCCACAG+AGG + chr8.1:6310003-6310022 MS.gene25685:CDS 55.0%
TGTTATCGCCGCTTCCTCTG+TGG - chr8.1:6310020-6310039 None:intergenic 55.0%
TTCTGCTCGGCCTTTAGTGC+CGG - chr8.1:6308146-6308165 None:intergenic 55.0%
! CGAGGTACTTCCGGCACTAA+AGG + chr8.1:6308133-6308152 MS.gene25685:CDS 55.0%
! TGATGGGCATGGAGGCTTTC+AGG + chr8.1:6308478-6308497 MS.gene25685:CDS 55.0%
!! GGTGTCTATGATGGGCATGG+AGG + chr8.1:6308470-6308489 MS.gene25685:CDS 55.0%
ATCGCCGCTTCCTCTGTGGA+GGG - chr8.1:6310016-6310035 None:intergenic 60.0%
CACGGTATCCGCGGAGGTAA+AGG + chr8.1:6307896-6307915 MS.gene25685:CDS 60.0%
TATCGCCGCTTCCTCTGTGG+AGG - chr8.1:6310017-6310036 None:intergenic 60.0%
TCAGATCACGGTATCCGCGG+AGG + chr8.1:6307890-6307909 MS.gene25685:CDS 60.0%
CTCGCCCTCCACAGAGGAAG+CGG + chr8.1:6310009-6310028 MS.gene25685:CDS 65.0%
GCAGTGGAGCCAGCAGTCTC+AGG - chr8.1:6308751-6308770 None:intergenic 65.0%
!! GACTGCTGGCTCCACTGCAG+TGG + chr8.1:6308753-6308772 MS.gene25685:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 6307708 6310095 6307708 ID=MS.gene25685
chr8.1 mRNA 6307708 6310095 6307708 ID=MS.gene25685.t1;Parent=MS.gene25685
chr8.1 exon 6307708 6308499 6307708 ID=MS.gene25685.t1.exon1;Parent=MS.gene25685.t1
chr8.1 CDS 6307708 6308499 6307708 ID=cds.MS.gene25685.t1;Parent=MS.gene25685.t1
chr8.1 exon 6308580 6308879 6308580 ID=MS.gene25685.t1.exon2;Parent=MS.gene25685.t1
chr8.1 CDS 6308580 6308879 6308580 ID=cds.MS.gene25685.t1;Parent=MS.gene25685.t1
chr8.1 exon 6308972 6309077 6308972 ID=MS.gene25685.t1.exon3;Parent=MS.gene25685.t1
chr8.1 CDS 6308972 6309077 6308972 ID=cds.MS.gene25685.t1;Parent=MS.gene25685.t1
chr8.1 exon 6309752 6310095 6309752 ID=MS.gene25685.t1.exon4;Parent=MS.gene25685.t1
chr8.1 CDS 6309752 6310095 6309752 ID=cds.MS.gene25685.t1;Parent=MS.gene25685.t1
Gene Sequence

>MS.gene25685

ATGGAAGAAATATCTTCAAGTGTTGCAGTGCCATTTACACTTGGAAATTTGATTCAAAAGGATGCTGCTGTTACAACTCATATGGAGATAACCGGGTTGAAGCTTATGGCAAATACTGCTGCTGCTTTGATATTAAATCCTGCAGTTGGAAATGAAAACCATGCTGATGTTAGTCTTCAACATCAGATCACGGTATCCGCGGAGGTAAAGGAGAATCAAGTTGGTGCGTCTGTTGTCTCGGAAATGTTGATTGAATGTGGGAGTAATTGGATCTTGAGTGAAAGCCATAACCAGGCTATAAAGGACGATGAGATCATGTTAGCTGTGGATTTTCAGTGCCTGCATAATTCAGGCTCTCAATCTGTGGCAGATTCACCAATCATCGTCACGGTTGGTGATGAGATTCATGGTAAGTTTAGCATAAACGAGGTACTTCCGGCACTAAAGGCCGAGCAGAATACGGTTTCTGTTGCAATGGATATTGAGAGCGAAAATCGAAGCGTGTCAGAAGAGGCTGATCCAAAACTATCTGCTATTCTTCTTGATCAGTTGCCAAAGGAGAACAAAACATTGAGAACAAGCAACCAGAATGGTTTGGAATTGAGTAGTGGCCCTCTATGGGGTTTCTCATCAATCTGTGGAAATAGACCGGAGATGGAAGATGCTGTTGCTGTCAAACCTCAGCTTTTTCAAGTCCCTTCACAGATGCTAATGGATGACCATTTGAATGAAAACACAAAATATCCACAAGTCCATTTTTTTGGTGTCTATGATGGGCATGGAGGCTTTCAGGTAAGCGCCTTAATCAAATCATACAATTTGTATTATTGAAATTTTTATTTATTTTGCTGAGAGTGTTTTGTTTCTGATAGGTTGCTAATTACTGTCAAGAACGTCTACACTCAGCGTTGATTGAGGAGATTGAAGCTCGGCAGTCAAGTTTGGATGAAGCAAATGGGAGAAACAATTGGCAGGAAAATTGGAATAAAGTATTGTTCAATTGTTTTCAGAAAGTAGATGATGAGATTGAAACTATTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAATCAAACCCACATAATTGTTGCAAATTGTGGGGATTCGAGGGCTGTCTTGTATCGTGGGAAAGAAGCCATAGCGTTGTCTTCTGACCACAAAGTAAGGCATTTCATAGTTATTTCACAATATTTTTGAAATTATGTCAGACGCTGAAGTTGGCTGATACAAGAAACTGTACTTCACTTTTGCAGCCGAATCGAGAGGATGAGAGGGCAAGAATCGAAGCAGCAGGAGGAAGAGTCATACATTGGAAAGGATACAGAGTTCTTGGTGTCTTGGCCATGTCAAGGTCCATAGGTATGTATCTGTTGCATGATTGGTTTTCTTTCAACTTGATACTACTTTGCTTGCATGTTACTCTATTCAGTTTGGTATTAAGGGGTCAAAGTTTATTTATCATATAAATCAAACGTTTTTTGCTGAATAGGGACACAGGAACAAACAGTATTCTCTGCATGTCACTAACACATATTTGTTTTAGCTTTTTAAGTTTTAAGAAAGAAAGGAACACTACGTTACGAACAATTGTTAGTTTATTGATAGGAATTCGTGGTCAGTTTCTTTTAATCAGTATCTCAAGGACCCATAACTTTGGAACAGAAAAAGACTTTGCTATAATTCCTTGAATGTGATTTCAGCCTTTGGATAGGATATATTCTTTTTGTTGCATAAATTAGTTCTTGTTTGAGTTAAAAACTGTTTTAAAATCACTATCACAGATCTTCATCTCTGTCATTAATATATTTTTGTTTTAGACTTTGAAGTTTTAAGAAAAATATTATAGTGCATCATGGCAAGTTTCCTTTATTCAGAAAATGGCTTAATACACTTCCTTGAATGTGATTTCAGCCTTTGGATATCATAAACTTGTTTTGCTACATAAATTAGTCCTTGTTTGAGTTAAAAACTGCAATAAAATCACCCCATATCAGTAATTGAGATTAATTTTTCTTATTGTCTTGTTCAAACAGGTGATAGATACTTGAAACCATGGATAATTCCAGAACCAGAAGTCAATATTGTGCAAAGAGAGAAAAATGATGAGTGCCTTATTTTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCATGTGATATTGCAAGGAAGCGAATCCTTCTTTGGCACAAGAAGTATGGTGACAACGGAGCAACAGTACTTGACAAAGGAGAAGGAGGAGTTGATCTTGCATCTCAGTCTGCCGCAGAGTATCTATCTAAACTCGCCCTCCACAGAGGAAGCGGCGATAACATCTCTGTAATTGTGATAGATTTAAAGGCTGTGAGAAAATTGAAGAGAAAGACATAA
Protein sequence

>MS.gene25685.t1

MEEISSSVAVPFTLGNLIQKDAAVTTHMEITGLKLMANTAAALILNPAVGNENHADVSLQHQITVSAEVKENQVGASVVSEMLIECGSNWILSESHNQAIKDDEIMLAVDFQCLHNSGSQSVADSPIIVTVGDEIHGKFSINEVLPALKAEQNTVSVAMDIESENRSVSEEADPKLSAILLDQLPKENKTLRTSNQNGLELSSGPLWGFSSICGNRPEMEDAVAVKPQLFQVPSQMLMDDHLNENTKYPQVHFFGVYDGHGGFQVANYCQERLHSALIEEIEARQSSLDEANGRNNWQENWNKVLFNCFQKVDDEIETIAPETAGSTAVVAILNQTHIIVANCGDSRAVLYRGKEAIALSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVQREKNDECLILASDGLWDVMTNEEACDIARKRILLWHKKYGDNGATVLDKGEGGVDLASQSAAEYLSKLALHRGSGDNISVIVIDLKAVRKLKRKT