Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25722.t1 | XP_003601479.2 | 99.6 | 459 | 2 | 0 | 26 | 484 | 1 | 459 | 9.50E-266 | 925.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25722.t1 | F4JRE0 | 82.0 | 449 | 81 | 0 | 36 | 484 | 4 | 452 | 1.5e-216 | 753.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25722.t1 | G7J833 | 99.6 | 459 | 2 | 0 | 26 | 484 | 1 | 459 | 6.8e-266 | 925.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049209 | MS.gene25722 | 0.846052 | 2.77E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAGAAAATTGTTAGA+TGG | - | 24220:86864-86883 | MS.gene25722:CDS | 15.0% |
| !! | TAGTTTATCTAAGTTTCTTT+AGG | - | 24220:86803-86822 | MS.gene25722:CDS | 20.0% |
| !!! | AATTGATTGATCTTTTACAT+GGG | + | 24220:86599-86618 | None:intergenic | 20.0% |
| !!! | ATCAATTTTATAATGCAATG+CGG | - | 24220:86712-86731 | MS.gene25722:CDS | 20.0% |
| !!! | ATCATTTTATATCTTATCCT+TGG | - | 24220:85787-85806 | MS.gene25722:CDS | 20.0% |
| ! | ATCCTCATAAGTATAATACT+TGG | + | 24220:86979-86998 | None:intergenic | 25.0% |
| ! | ATGTTTGTTCATTATGTTTG+TGG | - | 24220:86906-86925 | MS.gene25722:CDS | 25.0% |
| ! | GCATTGCATTATAAAATTGA+TGG | + | 24220:86713-86732 | None:intergenic | 25.0% |
| ! | TAATAACCATCAGTGAATTT+AGG | + | 24220:85483-85502 | None:intergenic | 25.0% |
| ! | TGTTTGTTCATTATGTTTGT+GGG | - | 24220:86907-86926 | MS.gene25722:CDS | 25.0% |
| ! | TTGTGAAAAGTGATATAAGA+TGG | - | 24220:85398-85417 | MS.gene25722:intron | 25.0% |
| ! | TTTCTTAAGAACTGTAAGAA+GGG | - | 24220:85531-85550 | MS.gene25722:intron | 25.0% |
| !! | AATTGATGGATGATTGTTTA+AGG | + | 24220:86699-86718 | None:intergenic | 25.0% |
| !! | CAATTGATTGATCTTTTACA+TGG | + | 24220:86600-86619 | None:intergenic | 25.0% |
| !! | CAGTACTCAATTTTATTCTA+TGG | - | 24220:85932-85951 | MS.gene25722:CDS | 25.0% |
| !! | GAATAAAATTGAGTACTGTA+AGG | + | 24220:85930-85949 | None:intergenic | 25.0% |
| !! | TTTTCTTAAGAACTGTAAGA+AGG | - | 24220:85530-85549 | MS.gene25722:intron | 25.0% |
| !!! | TATTGGTTCATGAATATGAA+GGG | - | 24220:85125-85144 | MS.gene25722:intron | 25.0% |
| !!! | TTTTTTAGTTGATAATGCTC+TGG | - | 24220:87045-87064 | MS.gene25722:CDS | 25.0% |
| AAAGAAAAGCTCAATGAAGA+GGG | + | 24220:86181-86200 | None:intergenic | 30.0% | |
| AAATGAGCTTGACAAATATC+AGG | - | 24220:85330-85349 | MS.gene25722:intron | 30.0% | |
| AATCTTGGAGAACTTCTTAT+GGG | - | 24220:84830-84849 | MS.gene25722:intron | 30.0% | |
| AGCTCAAAATACAAGGAAAT+AGG | + | 24220:85982-86001 | None:intergenic | 30.0% | |
| AGGTAATAAAAGAGCAAGAA+AGG | - | 24220:85350-85369 | MS.gene25722:intron | 30.0% | |
| ATCAAGCTACAAAAAGAACT+CGG | + | 24220:86635-86654 | None:intergenic | 30.0% | |
| GACCAAGTATTATACTTATG+AGG | - | 24220:86974-86993 | MS.gene25722:CDS | 30.0% | |
| GATATTTGTCAAGCTCATTT+GGG | + | 24220:85330-85349 | None:intergenic | 30.0% | |
| GGCATTAATATATTCTCCAT+TGG | + | 24220:84711-84730 | None:intergenic | 30.0% | |
| GGGTCATATTTAATACTACA+GGG | + | 24220:85256-85275 | None:intergenic | 30.0% | |
| GGTCATATTTAATACTACAG+GGG | + | 24220:85255-85274 | None:intergenic | 30.0% | |
| TAAAGAAAAGCTCAATGAAG+AGG | + | 24220:86182-86201 | None:intergenic | 30.0% | |
| TACAAGCATCAAGTTATTTG+TGG | + | 24220:87024-87043 | None:intergenic | 30.0% | |
| TATTCACTTGATACAGATCA+CGG | + | 24220:84970-84989 | None:intergenic | 30.0% | |
| TCAAGTTATTTGTGGACAAT+AGG | + | 24220:87016-87035 | None:intergenic | 30.0% | |
| TGATATTTGTCAAGCTCATT+TGG | + | 24220:85331-85350 | None:intergenic | 30.0% | |
| TGTTGTAGGTGATGTATTTA+GGG | - | 24220:85627-85646 | MS.gene25722:CDS | 30.0% | |
| TTATATCTTCTGTTCGTTCA+AGG | - | 24220:86940-86959 | MS.gene25722:CDS | 30.0% | |
| TTGTTCATTCGAAATCGATA+GGG | + | 24220:84875-84894 | None:intergenic | 30.0% | |
| TTGTTGTAGGTGATGTATTT+AGG | - | 24220:85626-85645 | MS.gene25722:intron | 30.0% | |
| TTTGTTCATTCGAAATCGAT+AGG | + | 24220:84876-84895 | None:intergenic | 30.0% | |
| ! | ATGGTTATTATTTTCCTAGC+TGG | - | 24220:85493-85512 | MS.gene25722:intron | 30.0% |
| ! | TAGCAATGGTTTTTATCTTC+CGG | - | 24220:84664-84683 | MS.gene25722:intron | 30.0% |
| !! | GTATTGGTTCATGAATATGA+AGG | - | 24220:85124-85143 | MS.gene25722:intron | 30.0% |
| !! | TTGGAATTAGCTTTGATTCA+CGG | - | 24220:84530-84549 | MS.gene25722:intron | 30.0% |
| AAAATGGGGTTAAAATCCAG+TGG | - | 24220:85029-85048 | MS.gene25722:intron | 35.0% | |
| AATTTCCCTTGGAATCTGAT+TGG | + | 24220:86097-86116 | None:intergenic | 35.0% | |
| ATCATTAAGGGAACATCAGA+AGG | - | 24220:85847-85866 | MS.gene25722:CDS | 35.0% | |
| ATGAGGTATACTAGCCAAAA+TGG | - | 24220:85013-85032 | MS.gene25722:intron | 35.0% | |
| ATTCACTTGATACAGATCAC+GGG | + | 24220:84969-84988 | None:intergenic | 35.0% | |
| ATTGCAATCATGTTGTCAAC+TGG | - | 24220:86483-86502 | MS.gene25722:CDS | 35.0% | |
| CTCAATCCTAAATTCACTGA+TGG | - | 24220:85474-85493 | MS.gene25722:intron | 35.0% | |
| CTTGTACTCCATTAACTACT+TGG | - | 24220:86389-86408 | MS.gene25722:CDS | 35.0% | |
| GAACCAATACAGTGAATTTC+AGG | + | 24220:85114-85133 | None:intergenic | 35.0% | |
| GAAGAACAGCTCAAAATACA+AGG | + | 24220:85989-86008 | None:intergenic | 35.0% | |
| GAATCTTGGAGAACTTCTTA+TGG | - | 24220:84829-84848 | MS.gene25722:intron | 35.0% | |
| GAGAAAACCTTTCATCTACT+GGG | - | 24220:84610-84629 | MS.gene25722:intron | 35.0% | |
| GATGCTTATTTGAAGATGGA+GGG | - | 24220:85433-85452 | MS.gene25722:intron | 35.0% | |
| GATTGCATTGCATAATAGTG+TGG | - | 24220:86652-86671 | MS.gene25722:CDS | 35.0% | |
| GCACAAAGTAGAATGACATA+AGG | + | 24220:86521-86540 | None:intergenic | 35.0% | |
| GGGGTCATATTTAATACTAC+AGG | + | 24220:85257-85276 | None:intergenic | 35.0% | |
| GTACTGAAATACAGAACCAA+AGG | + | 24220:86011-86030 | None:intergenic | 35.0% | |
| GTCGAAAACCAAGTAGTTAA+TGG | + | 24220:86400-86419 | None:intergenic | 35.0% | |
| TACATGCACACTTATTCCAA+TGG | - | 24220:84692-84711 | MS.gene25722:intron | 35.0% | |
| TAGTGAATAGCCAAGGTAAA+GGG | + | 24220:86454-86473 | None:intergenic | 35.0% | |
| TCATCAGTGAAGATAGATTG+AGG | - | 24220:86552-86571 | MS.gene25722:CDS | 35.0% | |
| TCATTAAGGGAACATCAGAA+GGG | - | 24220:85848-85867 | MS.gene25722:CDS | 35.0% | |
| TCTCTGAACATAGTCATTCA+AGG | - | 24220:86746-86765 | MS.gene25722:CDS | 35.0% | |
| TGAGAAAACCTTTCATCTAC+TGG | - | 24220:84609-84628 | MS.gene25722:intron | 35.0% | |
| TGAGGTATACTAGCCAAAAT+GGG | - | 24220:85014-85033 | MS.gene25722:intron | 35.0% | |
| TTCATGAATATGAAGGGAGA+GGG | - | 24220:85131-85150 | MS.gene25722:intron | 35.0% | |
| TTGGGATGCTTATTTGAAGA+TGG | - | 24220:85429-85448 | MS.gene25722:intron | 35.0% | |
| TTTACCTCGTGCTCATTTAA+TGG | + | 24220:84929-84948 | None:intergenic | 35.0% | |
| TTTGACAAGGTATGAGGAAT+TGG | - | 24220:85555-85574 | MS.gene25722:intron | 35.0% | |
| ! | AGAAGTCAACGAATTGACTT+TGG | + | 24220:84732-84751 | None:intergenic | 35.0% |
| ! | AGCAATGGTTTTTATCTTCC+GGG | - | 24220:84665-84684 | MS.gene25722:intron | 35.0% |
| ! | ATACATTTTGTGCTTTGCCA+TGG | + | 24220:85284-85303 | None:intergenic | 35.0% |
| ! | ATGAAAGGTTTTCTCAGAGT+TGG | + | 24220:84605-84624 | None:intergenic | 35.0% |
| ! | ATTTTGAGCTGTTCTTCCTT+TGG | - | 24220:85992-86011 | MS.gene25722:CDS | 35.0% |
| !! | AAGAAAAGTGCTGAGAATCT+TGG | - | 24220:84815-84834 | MS.gene25722:intron | 35.0% |
| !! | ACTGGATTTTAACCCCATTT+TGG | + | 24220:85030-85049 | None:intergenic | 35.0% |
| !! | AGTTGATAATGCTCTGGATA+TGG | - | 24220:87051-87070 | MS.gene25722:CDS | 35.0% |
| !!! | ACTATTGTTTTTGCAGCACT+TGG | - | 24220:85721-85740 | MS.gene25722:CDS | 35.0% |
| AAATAAGCATCCCAACGTGA+TGG | + | 24220:85424-85443 | None:intergenic | 40.0% | |
| AAGCTTCTGTGTGTAATGGT+TGG | - | 24220:85664-85683 | MS.gene25722:CDS | 40.0% | |
| AAGGACCAATCAGATTCCAA+GGG | - | 24220:86089-86108 | MS.gene25722:CDS | 40.0% | |
| AAGGGATTTGACAAGGTATG+AGG | - | 24220:85549-85568 | MS.gene25722:intron | 40.0% | |
| ACCCTCATTGGAGGATTTAT+GGG | - | 24220:86036-86055 | MS.gene25722:CDS | 40.0% | |
| ACGTCTATGGAGGATCATTA+AGG | - | 24220:85834-85853 | MS.gene25722:CDS | 40.0% | |
| AGATGAATGAGGAGCTTTCT+GGG | - | 24220:85596-85615 | MS.gene25722:intron | 40.0% | |
| AGCCAATCGAATATCCTGTA+AGG | - | 24220:86070-86089 | MS.gene25722:CDS | 40.0% | |
| AGGAAAACCCAGTAGATGAA+AGG | + | 24220:84620-84639 | None:intergenic | 40.0% | |
| AGGATAATGAAAGCAATGCC+AGG | + | 24220:85910-85929 | None:intergenic | 40.0% | |
| ATATAAGATGGCCATCACGT+TGG | - | 24220:85410-85429 | MS.gene25722:intron | 40.0% | |
| CAAGATGGATATTTCCTTGC+AGG | + | 24220:86120-86139 | None:intergenic | 40.0% | |
| CACATATATGCATCTGTGTG+TGG | - | 24220:86305-86324 | MS.gene25722:CDS | 40.0% | |
| CCAATACAGTGAATTTCAGG+TGG | + | 24220:85111-85130 | None:intergenic | 40.0% | |
| CCACCTGAAATTCACTGTAT+TGG | - | 24220:85108-85127 | MS.gene25722:intron | 40.0% | |
| CGTCTATGGAGGATCATTAA+GGG | - | 24220:85835-85854 | MS.gene25722:CDS | 40.0% | |
| CTCAAAGCTTCTGTGTGTAA+TGG | - | 24220:85660-85679 | MS.gene25722:CDS | 40.0% | |
| CTGCAAGGAAATATCCATCT+TGG | - | 24220:86118-86137 | MS.gene25722:CDS | 40.0% | |
| CTGTAAGAAGGGATTTGACA+AGG | - | 24220:85542-85561 | MS.gene25722:intron | 40.0% | |
| CTTCTGTTCGTTCAAGGATA+GGG | - | 24220:86946-86965 | MS.gene25722:CDS | 40.0% | |
| GAACATAGTCATTCAAGGAC+TGG | - | 24220:86751-86770 | MS.gene25722:CDS | 40.0% | |
| GAATGACATAAGGAAGCCAA+TGG | + | 24220:86511-86530 | None:intergenic | 40.0% | |
| GAGCAAAGACAGTGAAAGAA+AGG | + | 24220:84640-84659 | None:intergenic | 40.0% | |
| GAGGTATACTAGCCAAAATG+GGG | - | 24220:85015-85034 | MS.gene25722:intron | 40.0% | |
| GCAATAGAAGAACAACCAAC+AGG | + | 24220:86251-86270 | None:intergenic | 40.0% | |
| GCATCTGGGTATGAAATAGT+TGG | - | 24220:85217-85236 | MS.gene25722:intron | 40.0% | |
| GGAGAGGGGTTGAAATTATT+GGG | - | 24220:85146-85165 | MS.gene25722:intron | 40.0% | |
| GGATGCTTATTTGAAGATGG+AGG | - | 24220:85432-85451 | MS.gene25722:intron | 40.0% | |
| GGGTTGAAATTATTGGGACT+GGG | - | 24220:85152-85171 | MS.gene25722:intron | 40.0% | |
| GGTTGAAATTATTGGGACTG+GGG | - | 24220:85153-85172 | MS.gene25722:intron | 40.0% | |
| GTAGTGAATAGCCAAGGTAA+AGG | + | 24220:86455-86474 | None:intergenic | 40.0% | |
| GTATGAGGAATTGGACAAAG+AGG | - | 24220:85564-85583 | MS.gene25722:intron | 40.0% | |
| GTCCTTACAGGATATTCGAT+TGG | + | 24220:86075-86094 | None:intergenic | 40.0% | |
| GTCTTTGCTCAAGTTAGCAA+TGG | - | 24220:84650-84669 | MS.gene25722:intron | 40.0% | |
| GTGAAGATAGATTGAGGTTC+TGG | - | 24220:86558-86577 | MS.gene25722:CDS | 40.0% | |
| GTTCAAATTCTTGGAATGGC+AGG | - | 24220:85694-85713 | MS.gene25722:CDS | 40.0% | |
| GTTCATGAATATGAAGGGAG+AGG | - | 24220:85130-85149 | MS.gene25722:intron | 40.0% | |
| TAAGGACCAATCAGATTCCA+AGG | - | 24220:86088-86107 | MS.gene25722:CDS | 40.0% | |
| TATAAGATGGCCATCACGTT+GGG | - | 24220:85411-85430 | MS.gene25722:intron | 40.0% | |
| TCAATGAAGAGGGTTCCAAA+TGG | + | 24220:86171-86190 | None:intergenic | 40.0% | |
| TCATAACTGGCAAGTTGTCA+AGG | + | 24220:84997-85016 | None:intergenic | 40.0% | |
| TCATGAATATGAAGGGAGAG+GGG | - | 24220:85132-85151 | MS.gene25722:intron | 40.0% | |
| TCTTCTGTTCGTTCAAGGAT+AGG | - | 24220:86945-86964 | MS.gene25722:CDS | 40.0% | |
| TCTTTATCCTCTCTAGCATC+TGG | - | 24220:86196-86215 | MS.gene25722:CDS | 40.0% | |
| TGACAAAAACAATGCCAGCT+AGG | + | 24220:85510-85529 | None:intergenic | 40.0% | |
| TGGCTAGTATACCTCATAAC+TGG | + | 24220:85010-85029 | None:intergenic | 40.0% | |
| TTGACAACTTGCCAGTTATG+AGG | - | 24220:84996-85015 | MS.gene25722:intron | 40.0% | |
| TTGTCTTGCGTTCAAGGAAA+TGG | - | 24220:84574-84593 | MS.gene25722:intron | 40.0% | |
| ! | ACTTTTCTTTATCCCACCAG+GGG | + | 24220:84804-84823 | None:intergenic | 40.0% |
| ! | CACTTTTCTTTATCCCACCA+GGG | + | 24220:84805-84824 | None:intergenic | 40.0% |
| ! | TTACGTGTTTGGTTTCCTGT+TGG | - | 24220:86233-86252 | MS.gene25722:CDS | 40.0% |
| !! | TTCTGAAGCTGACAAGAAGA+AGG | - | 24220:85195-85214 | MS.gene25722:intron | 40.0% |
| !!! | TCTGCTGCATGTTTTTTTCC+TGG | - | 24220:85889-85908 | MS.gene25722:CDS | 40.0% |
| AAGGGTGGAGATCAGTTTCT+TGG | - | 24220:85866-85885 | MS.gene25722:CDS | 45.0% | |
| ATCTGTGTGTGGAAGATTGG+CGG | - | 24220:86316-86335 | MS.gene25722:CDS | 45.0% | |
| ATGTTGTCAACTGGCACCAT+TGG | - | 24220:86492-86511 | MS.gene25722:CDS | 45.0% | |
| CAGATGAATGAGGAGCTTTC+TGG | - | 24220:85595-85614 | MS.gene25722:intron | 45.0% | |
| CCAAGAACAAGAAGCCAAGA+TGG | + | 24220:86135-86154 | None:intergenic | 45.0% | |
| CCATCTTGGCTTCTTGTTCT+TGG | - | 24220:86132-86151 | MS.gene25722:CDS | 45.0% | |
| CCATGAGTAGTGAATAGCCA+AGG | + | 24220:86461-86480 | None:intergenic | 45.0% | |
| CCCCATAAATCCTCCAATGA+GGG | + | 24220:86040-86059 | None:intergenic | 45.0% | |
| CCCTCATTGGAGGATTTATG+GGG | - | 24220:86037-86056 | MS.gene25722:CDS | 45.0% | |
| CCTTGGCTATTCACTACTCA+TGG | - | 24220:86458-86477 | MS.gene25722:CDS | 45.0% | |
| CGGGGTTCAAATTCTTGGAA+TGG | - | 24220:85690-85709 | MS.gene25722:CDS | 45.0% | |
| CTATGGAACAGCAACAGTAC+TGG | - | 24220:85949-85968 | MS.gene25722:CDS | 45.0% | |
| CTGTAGTTGTCTTGCGTTCA+AGG | - | 24220:84568-84587 | MS.gene25722:intron | 45.0% | |
| CTGTGTGTAATGGTTGGAGA+CGG | - | 24220:85670-85689 | MS.gene25722:CDS | 45.0% | |
| GACCCTCATTGGAGGATTTA+TGG | - | 24220:86035-86054 | MS.gene25722:CDS | 45.0% | |
| GGAGGATTTATGGGGACAAA+AGG | - | 24220:86045-86064 | MS.gene25722:CDS | 45.0% | |
| GGGAGAGGGGTTGAAATTAT+TGG | - | 24220:85145-85164 | MS.gene25722:intron | 45.0% | |
| GGGAGGTTCTATTACGTGTT+TGG | - | 24220:86222-86241 | MS.gene25722:CDS | 45.0% | |
| GGGGTTGAAATTATTGGGAC+TGG | - | 24220:85151-85170 | MS.gene25722:intron | 45.0% | |
| GTAGTAACTGAAGGGAAGCT+CGG | + | 24220:84762-84781 | None:intergenic | 45.0% | |
| TAAATATGACCCCGAAGCCA+TGG | - | 24220:85264-85283 | MS.gene25722:intron | 45.0% | |
| TAAGTGTGCATGTAGCTTCC+CGG | + | 24220:84686-84705 | None:intergenic | 45.0% | |
| TCCCCATAAATCCTCCAATG+AGG | + | 24220:86041-86060 | None:intergenic | 45.0% | |
| TGAAATTATTGGGACTGGGG+AGG | - | 24220:85156-85175 | MS.gene25722:intron | 45.0% | |
| TGCATCTGTGTGTGGAAGAT+TGG | - | 24220:86313-86332 | MS.gene25722:CDS | 45.0% | |
| TGGGGTTAAAATCCAGTGGA+CGG | - | 24220:85033-85052 | MS.gene25722:intron | 45.0% | |
| TGTGTGTAATGGTTGGAGAC+GGG | - | 24220:85671-85690 | MS.gene25722:CDS | 45.0% | |
| TTAAGGGAACATCAGAAGGG+TGG | - | 24220:85851-85870 | MS.gene25722:CDS | 45.0% | |
| TTCCAAGGGAAATTCCTGCA+AGG | - | 24220:86103-86122 | MS.gene25722:CDS | 45.0% | |
| TTCCTTGCAGGAATTTCCCT+TGG | + | 24220:86108-86127 | None:intergenic | 45.0% | |
| TTTGTGCTTTGCCATGGCTT+CGG | + | 24220:85278-85297 | None:intergenic | 45.0% | |
| ! | CTTTTCTTTATCCCACCAGG+GGG | + | 24220:84803-84822 | None:intergenic | 45.0% |
| ! | GCACTTTTCTTTATCCCACC+AGG | + | 24220:84806-84825 | None:intergenic | 45.0% |
| ! | GGAATCTGATTGGTCCTTAC+AGG | + | 24220:86087-86106 | None:intergenic | 45.0% |
| ! | TGTTGTTTGTGCTGAGGTGT+CGG | - | 24220:86275-86294 | MS.gene25722:CDS | 45.0% |
| !! | CACAGAAGCTTTGAGCATTC+AGG | + | 24220:85655-85674 | None:intergenic | 45.0% |
| !! | CTGACAAGAAGAAGGCATCT+GGG | - | 24220:85203-85222 | MS.gene25722:intron | 45.0% |
| !! | GCTGATTGTTGTTTGTGCTG+AGG | - | 24220:86269-86288 | MS.gene25722:CDS | 45.0% |
| !! | TCTGGGTGGAAACTTGTTGT+AGG | - | 24220:85613-85632 | MS.gene25722:intron | 45.0% |
| !! | TGGAAGGCATTCTATGCTTC+AGG | - | 24220:86345-86364 | MS.gene25722:CDS | 45.0% |
| AATCCTCCAATGAGGGTCAG+AGG | + | 24220:86033-86052 | None:intergenic | 50.0% | |
| AGCGCCATTAAATGAGCACG+AGG | - | 24220:84922-84941 | MS.gene25722:intron | 50.0% | |
| AGGGAGGCTGTAGTAACTGA+AGG | + | 24220:84771-84790 | None:intergenic | 50.0% | |
| AGGTAAAGGGTAGCTGACAC+AGG | + | 24220:86441-86460 | None:intergenic | 50.0% | |
| ATCCTCTCTAGCATCTGGCT+CGG | - | 24220:86201-86220 | MS.gene25722:CDS | 50.0% | |
| ATGTCAGCGTACGTCTATGG+AGG | - | 24220:85824-85843 | MS.gene25722:CDS | 50.0% | |
| ATTATTGGGACTGGGGAGGA+AGG | - | 24220:85160-85179 | MS.gene25722:intron | 50.0% | |
| CAGATGGAGTGTACCCAACA+GGG | + | 24220:85063-85082 | None:intergenic | 50.0% | |
| CTGTTCGTTCAAGGATAGGG+AGG | - | 24220:86949-86968 | MS.gene25722:CDS | 50.0% | |
| CTTATCCTTGGAATTGCCGC+TGG | - | 24220:85799-85818 | MS.gene25722:CDS | 50.0% | |
| GCTATGTCAGCGTACGTCTA+TGG | - | 24220:85821-85840 | MS.gene25722:CDS | 50.0% | |
| GGAGACGGGGTTCAAATTCT+TGG | - | 24220:85685-85704 | MS.gene25722:CDS | 50.0% | |
| GGCACAAGCTCAGATGAATG+AGG | - | 24220:85585-85604 | MS.gene25722:intron | 50.0% | |
| GGGAGGCTGTAGTAACTGAA+GGG | + | 24220:84770-84789 | None:intergenic | 50.0% | |
| GGGGTTAAAATCCAGTGGAC+GGG | - | 24220:85034-85053 | MS.gene25722:intron | 50.0% | |
| GGGTTAAAATCCAGTGGACG+GGG | - | 24220:85035-85054 | MS.gene25722:intron | 50.0% | |
| GTGTCAGCTACCCTTTACCT+TGG | - | 24220:86441-86460 | MS.gene25722:CDS | 50.0% | |
| GTGTGTAATGGTTGGAGACG+GGG | - | 24220:85672-85691 | MS.gene25722:CDS | 50.0% | |
| GTTGGGTACACTCCATCTGA+TGG | - | 24220:85064-85083 | MS.gene25722:intron | 50.0% | |
| TAATCTGCACCGCCATCAGA+TGG | + | 24220:85079-85098 | None:intergenic | 50.0% | |
| TCAGATGGAGTGTACCCAAC+AGG | + | 24220:85064-85083 | None:intergenic | 50.0% | |
| TCAGTACCTCTGACCCTCAT+TGG | - | 24220:86024-86043 | MS.gene25722:CDS | 50.0% | |
| TCCCTGTTAGTAGCATCCCT+CGG | + | 24220:85765-85784 | None:intergenic | 50.0% | |
| TGAATGAGGAGCTTTCTGGG+TGG | - | 24220:85599-85618 | MS.gene25722:intron | 50.0% | |
| TGGAGGGTTCTCGAGTTCAT+TGG | - | 24220:85449-85468 | MS.gene25722:intron | 50.0% | |
| TTCGACCTGCAGAGTTTGAG+TGG | - | 24220:86414-86433 | MS.gene25722:CDS | 50.0% | |
| TTGTGCTTTGCCATGGCTTC+GGG | + | 24220:85277-85296 | None:intergenic | 50.0% | |
| ! | GGTGCTGGAACTCTTCCATT+TGG | - | 24220:86153-86172 | MS.gene25722:CDS | 50.0% |
| ! | TGGCTTCTTGTTCTTGGTGC+TGG | - | 24220:86138-86157 | MS.gene25722:CDS | 50.0% |
| !! | GCTGACAAGAAGAAGGCATC+TGG | - | 24220:85202-85221 | MS.gene25722:intron | 50.0% |
| ACGTACGCTGACATAGCCAG+CGG | + | 24220:85818-85837 | None:intergenic | 55.0% | |
| CAGGTCCACTCAAACTCTGC+AGG | + | 24220:86422-86441 | None:intergenic | 55.0% | |
| CATAGCCAGCGGCAATTCCA+AGG | + | 24220:85807-85826 | None:intergenic | 55.0% | |
| CCCGAGGGATGCTACTAACA+GGG | - | 24220:85761-85780 | MS.gene25722:CDS | 55.0% | |
| CCCTGTTAGTAGCATCCCTC+GGG | + | 24220:85764-85783 | None:intergenic | 55.0% | |
| GGGTACACTCCATCTGATGG+CGG | - | 24220:85067-85086 | MS.gene25722:intron | 55.0% | |
| GTACCTCTGACCCTCATTGG+AGG | - | 24220:86027-86046 | MS.gene25722:CDS | 55.0% | |
| TCATGTCTCCAGCATCCCGA+GGG | - | 24220:85746-85765 | MS.gene25722:CDS | 55.0% | |
| TCCCGAGGGATGCTACTAAC+AGG | - | 24220:85760-85779 | MS.gene25722:CDS | 55.0% | |
| TGTGCTTTGCCATGGCTTCG+GGG | + | 24220:85276-85295 | None:intergenic | 55.0% | |
| TGTGTGTGGAAGATTGGCGG+TGG | - | 24220:86319-86338 | MS.gene25722:CDS | 55.0% | |
| TTCATGTCTCCAGCATCCCG+AGG | - | 24220:85745-85764 | MS.gene25722:CDS | 55.0% | |
| ! | TCCTCTCTAGCATCTGGCTC+GGG | - | 24220:86202-86221 | MS.gene25722:CDS | 55.0% |
| !! | TGTTTGTGCTGAGGTGTCGG+TGG | - | 24220:86278-86297 | MS.gene25722:CDS | 55.0% |
| AGTAGCATCCCTCGGGATGC+TGG | + | 24220:85757-85776 | None:intergenic | 60.0% | |
| GGGACTGGGGAGGAAGGTTT+GGG | - | 24220:85166-85185 | MS.gene25722:intron | 60.0% | |
| GTGTGGAAGATTGGCGGTGG+TGG | - | 24220:86322-86341 | MS.gene25722:CDS | 60.0% | |
| TCCCGAGCCAGATGCTAGAG+AGG | + | 24220:86206-86225 | None:intergenic | 60.0% | |
| TCTTTATCCCACCAGGGGGC+TGG | + | 24220:84799-84818 | None:intergenic | 60.0% | |
| TGGGACTGGGGAGGAAGGTT+TGG | - | 24220:85165-85184 | MS.gene25722:intron | 60.0% | |
| ! | AGTGGACGGGGTACCCTGTT+GGG | - | 24220:85047-85066 | MS.gene25722:intron | 60.0% |
| ! | TGGAAGATTGGCGGTGGTGG+TGG | - | 24220:86325-86344 | MS.gene25722:CDS | 60.0% |
| !! | AGATTGGCGGTGGTGGTGGA+AGG | - | 24220:86329-86348 | MS.gene25722:CDS | 60.0% |
| !! | TCTCTAGCATCTGGCTCGGG+AGG | - | 24220:86205-86224 | MS.gene25722:CDS | 60.0% |
| CTTACTGCCAGCCCCCTGGT+GGG | - | 24220:84789-84808 | MS.gene25722:intron | 65.0% | |
| ! | CAACAGGGTACCCCGTCCAC+TGG | + | 24220:85048-85067 | None:intergenic | 65.0% |
| ! | CACCAGGGGGCTGGCAGTAA+GGG | + | 24220:84790-84809 | None:intergenic | 65.0% |
| ! | CAGTGGACGGGGTACCCTGT+TGG | - | 24220:85046-85065 | MS.gene25722:intron | 65.0% |
| CCTTACTGCCAGCCCCCTGG+TGG | - | 24220:84788-84807 | MS.gene25722:intron | 70.0% | |
| CTCCCTTACTGCCAGCCCCC+TGG | - | 24220:84785-84804 | MS.gene25722:intron | 70.0% | |
| ! | CAGGGGGCTGGCAGTAAGGG+AGG | + | 24220:84787-84806 | None:intergenic | 70.0% |
| ! | CCACCAGGGGGCTGGCAGTA+AGG | + | 24220:84791-84810 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 24220 | gene | 84516 | 87081 | 84516 | ID=MS.gene25722 |
| 24220 | mRNA | 84516 | 87081 | 84516 | ID=MS.gene25722.t1;Parent=MS.gene25722 |
| 24220 | exon | 85627 | 87081 | 85627 | ID=MS.gene25722.t1.exon1;Parent=MS.gene25722.t1 |
| 24220 | CDS | 85627 | 87081 | 85627 | ID=cds.MS.gene25722.t1;Parent=MS.gene25722.t1 |
| 24220 | exon | 84516 | 84544 | 84516 | ID=MS.gene25722.t1.exon2;Parent=MS.gene25722.t1 |
| 24220 | CDS | 84516 | 84544 | 84516 | ID=cds.MS.gene25722.t1;Parent=MS.gene25722.t1 |
| Gene Sequence |
| Protein sequence |
