Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25863.t1 | RHN68874.1 | 76.7 | 163 | 14 | 1 | 1 | 139 | 1 | 163 | 9.70E-65 | 256.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25863.t1 | F8WKW1 | 51.0 | 153 | 49 | 1 | 12 | 138 | 8 | 160 | 2.9e-41 | 169.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25863.t1 | A0A072UZ84 | 76.7 | 163 | 14 | 1 | 1 | 139 | 1 | 163 | 7.0e-65 | 256.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051789 | MS.gene25863 | 0.800496 | 1.40E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25863.t1 | MTR_3g479520 | 76.687 | 163 | 14 | 1 | 1 | 139 | 1 | 163 | 8.36e-85 | 256 |
| MS.gene25863.t1 | MTR_3g479620 | 66.875 | 160 | 29 | 1 | 12 | 147 | 3 | 162 | 7.27e-74 | 218 |
| MS.gene25863.t1 | MTR_3g079480 | 63.855 | 166 | 35 | 2 | 7 | 147 | 12 | 177 | 7.32e-69 | 216 |
| MS.gene25863.t1 | MTR_3g479490 | 60.625 | 160 | 39 | 1 | 12 | 147 | 3 | 162 | 7.98e-63 | 200 |
| MS.gene25863.t1 | MTR_3g479470 | 58.642 | 162 | 42 | 2 | 12 | 149 | 10 | 170 | 1.44e-56 | 184 |
| MS.gene25863.t1 | MTR_5g464810 | 48.447 | 161 | 58 | 2 | 10 | 145 | 7 | 167 | 7.40e-47 | 158 |
| MS.gene25863.t1 | MTR_5g064240 | 48.447 | 161 | 58 | 2 | 10 | 145 | 7 | 167 | 7.40e-47 | 158 |
| MS.gene25863.t1 | MTR_5g464760 | 48.750 | 160 | 57 | 2 | 11 | 145 | 8 | 167 | 1.07e-46 | 157 |
| MS.gene25863.t1 | MTR_0036s0220 | 46.584 | 161 | 61 | 2 | 10 | 145 | 7 | 167 | 2.54e-45 | 154 |
| MS.gene25863.t1 | MTR_2g008210 | 44.966 | 149 | 61 | 2 | 12 | 139 | 8 | 156 | 5.60e-42 | 145 |
| MS.gene25863.t1 | MTR_6g014195 | 42.484 | 153 | 59 | 2 | 10 | 133 | 5 | 157 | 1.40e-37 | 127 |
| MS.gene25863.t1 | MTR_6g014040 | 40.462 | 173 | 72 | 3 | 7 | 149 | 2 | 173 | 5.29e-37 | 132 |
| MS.gene25863.t1 | MTR_4g094220 | 41.176 | 153 | 64 | 1 | 13 | 139 | 5 | 157 | 8.73e-37 | 131 |
| MS.gene25863.t1 | MTR_6g014250 | 42.282 | 149 | 60 | 2 | 11 | 133 | 6 | 154 | 1.93e-36 | 130 |
| MS.gene25863.t1 | MTR_6g014270 | 42.763 | 152 | 56 | 2 | 10 | 130 | 2 | 153 | 6.87e-36 | 129 |
| MS.gene25863.t1 | MTR_0475s0020 | 57.895 | 95 | 37 | 1 | 7 | 98 | 2 | 96 | 8.44e-36 | 123 |
| MS.gene25863.t1 | MTR_6g014290 | 38.710 | 155 | 69 | 2 | 11 | 139 | 6 | 160 | 8.86e-36 | 129 |
| MS.gene25863.t1 | MTR_3g008010 | 41.176 | 153 | 64 | 2 | 13 | 139 | 8 | 160 | 2.00e-35 | 127 |
| MS.gene25863.t1 | MTR_6g014186 | 39.216 | 153 | 64 | 2 | 10 | 133 | 2 | 154 | 3.39e-35 | 126 |
| MS.gene25863.t1 | MTR_0199s0010 | 40.645 | 155 | 65 | 3 | 11 | 139 | 6 | 159 | 1.25e-34 | 122 |
| MS.gene25863.t1 | MTR_6g014220 | 42.667 | 150 | 60 | 2 | 11 | 134 | 6 | 155 | 5.90e-34 | 124 |
| MS.gene25863.t1 | MTR_0288s0020 | 38.462 | 169 | 73 | 3 | 11 | 149 | 6 | 173 | 1.89e-33 | 122 |
| MS.gene25863.t1 | MTR_8g007585 | 40.645 | 155 | 65 | 3 | 11 | 139 | 6 | 159 | 3.70e-33 | 120 |
| MS.gene25863.t1 | MTR_6g014020 | 36.310 | 168 | 78 | 2 | 7 | 145 | 2 | 169 | 1.04e-31 | 117 |
| MS.gene25863.t1 | MTR_6g014150 | 38.462 | 169 | 74 | 3 | 10 | 149 | 2 | 169 | 2.10e-31 | 117 |
| MS.gene25863.t1 | MTR_6g013440 | 40.506 | 158 | 65 | 2 | 11 | 139 | 7 | 164 | 2.76e-31 | 116 |
| MS.gene25863.t1 | MTR_8g059425 | 36.145 | 166 | 79 | 1 | 7 | 145 | 2 | 167 | 6.36e-31 | 115 |
| MS.gene25863.t1 | MTR_6g014187 | 40.645 | 155 | 63 | 2 | 11 | 136 | 6 | 160 | 8.16e-31 | 115 |
| MS.gene25863.t1 | MTR_6g014310 | 41.667 | 156 | 62 | 2 | 13 | 139 | 9 | 164 | 1.91e-30 | 114 |
| MS.gene25863.t1 | MTR_6g014170 | 41.333 | 150 | 62 | 2 | 11 | 134 | 6 | 155 | 2.84e-30 | 114 |
| MS.gene25863.t1 | MTR_6g013960 | 38.854 | 157 | 67 | 2 | 7 | 134 | 2 | 158 | 3.06e-30 | 114 |
| MS.gene25863.t1 | MTR_6g014200 | 40.237 | 169 | 71 | 3 | 10 | 149 | 2 | 169 | 4.41e-30 | 113 |
| MS.gene25863.t1 | MTR_6g014300 | 38.365 | 159 | 69 | 2 | 9 | 138 | 6 | 164 | 7.08e-30 | 112 |
| MS.gene25863.t1 | MTR_7g011470 | 41.830 | 153 | 60 | 2 | 10 | 133 | 5 | 157 | 9.86e-29 | 109 |
| MS.gene25863.t1 | MTR_6g014240 | 41.135 | 141 | 68 | 3 | 12 | 137 | 4 | 144 | 1.05e-28 | 109 |
| MS.gene25863.t1 | MTR_7g011470 | 41.830 | 153 | 60 | 2 | 10 | 133 | 5 | 157 | 1.18e-28 | 109 |
| MS.gene25863.t1 | MTR_6g013450 | 54.255 | 94 | 41 | 1 | 7 | 98 | 2 | 95 | 5.12e-28 | 107 |
| MS.gene25863.t1 | MTR_6g011340 | 40.127 | 157 | 65 | 2 | 7 | 134 | 2 | 158 | 6.37e-27 | 104 |
| MS.gene25863.t1 | MTR_6g014050 | 57.955 | 88 | 35 | 1 | 13 | 98 | 9 | 96 | 8.39e-27 | 104 |
| MS.gene25863.t1 | MTR_6g013990 | 56.667 | 90 | 37 | 1 | 11 | 98 | 6 | 95 | 1.46e-26 | 103 |
| MS.gene25863.t1 | MTR_5g058320 | 51.064 | 94 | 44 | 1 | 7 | 98 | 2 | 95 | 6.21e-26 | 102 |
| MS.gene25863.t1 | MTR_6g013920 | 36.842 | 152 | 68 | 2 | 7 | 130 | 2 | 153 | 1.11e-20 | 87.4 |
| MS.gene25863.t1 | MTR_6g013900 | 34.839 | 155 | 67 | 2 | 7 | 130 | 2 | 153 | 1.72e-19 | 84.0 |
| MS.gene25863.t1 | MTR_5g031860 | 34.356 | 163 | 82 | 5 | 8 | 147 | 5 | 165 | 3.77e-19 | 83.2 |
| MS.gene25863.t1 | MTR_7g013220 | 35.135 | 148 | 67 | 4 | 14 | 132 | 4 | 151 | 1.84e-18 | 80.9 |
| MS.gene25863.t1 | MTR_5g031830 | 33.333 | 153 | 77 | 5 | 6 | 135 | 3 | 153 | 1.03e-17 | 79.0 |
| MS.gene25863.t1 | MTR_7g013200 | 34.043 | 141 | 67 | 4 | 14 | 132 | 4 | 140 | 1.07e-17 | 79.0 |
| MS.gene25863.t1 | MTR_5g031840 | 35.135 | 148 | 70 | 6 | 12 | 135 | 2 | 147 | 3.32e-17 | 77.4 |
| MS.gene25863.t1 | MTR_7g013260 | 33.333 | 141 | 67 | 3 | 14 | 132 | 5 | 140 | 6.24e-16 | 73.9 |
| MS.gene25863.t1 | MTR_7g013240 | 32.624 | 141 | 68 | 3 | 14 | 132 | 5 | 140 | 6.74e-16 | 73.6 |
| MS.gene25863.t1 | MTR_7g013180 | 28.000 | 150 | 84 | 4 | 14 | 139 | 4 | 153 | 3.62e-14 | 68.9 |
| MS.gene25863.t1 | MTR_3g069690 | 29.371 | 143 | 71 | 4 | 17 | 138 | 10 | 143 | 4.19e-12 | 62.8 |
| MS.gene25863.t1 | MTR_6g038240 | 27.465 | 142 | 75 | 3 | 11 | 130 | 7 | 142 | 7.19e-12 | 62.0 |
| MS.gene25863.t1 | MTR_5g098960 | 31.613 | 155 | 81 | 5 | 12 | 145 | 4 | 154 | 3.35e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25863.t1 | AT1G22380 | 46.875 | 160 | 61 | 1 | 10 | 145 | 8 | 167 | 1.93e-47 | 160 |
| MS.gene25863.t1 | AT1G22360 | 46.753 | 154 | 58 | 1 | 9 | 138 | 4 | 157 | 5.73e-47 | 158 |
| MS.gene25863.t1 | AT1G22360 | 46.753 | 154 | 58 | 1 | 9 | 138 | 4 | 157 | 5.75e-47 | 158 |
| MS.gene25863.t1 | AT1G22370 | 47.020 | 151 | 56 | 1 | 12 | 138 | 10 | 160 | 1.17e-46 | 157 |
| MS.gene25863.t1 | AT1G22400 | 44.099 | 161 | 66 | 1 | 9 | 145 | 7 | 167 | 1.52e-46 | 157 |
| MS.gene25863.t1 | AT1G22340 | 42.857 | 161 | 68 | 1 | 9 | 145 | 7 | 167 | 5.94e-43 | 148 |
| MS.gene25863.t1 | AT1G78270 | 41.463 | 164 | 71 | 2 | 10 | 149 | 8 | 170 | 9.47e-42 | 145 |
| MS.gene25863.t1 | AT3G02100 | 30.323 | 155 | 82 | 3 | 5 | 133 | 3 | 157 | 4.69e-17 | 77.0 |
| MS.gene25863.t1 | AT3G46660 | 37.500 | 144 | 58 | 5 | 11 | 129 | 7 | 143 | 1.12e-16 | 75.9 |
| MS.gene25863.t1 | AT3G46650 | 34.014 | 147 | 68 | 4 | 11 | 135 | 6 | 145 | 4.52e-15 | 71.2 |
| MS.gene25863.t1 | AT5G38010 | 31.034 | 145 | 66 | 2 | 11 | 129 | 6 | 142 | 1.33e-14 | 70.1 |
| MS.gene25863.t1 | AT3G21560 | 29.448 | 163 | 76 | 3 | 14 | 143 | 11 | 167 | 1.44e-14 | 70.1 |
| MS.gene25863.t1 | AT3G46680 | 33.566 | 143 | 63 | 5 | 11 | 129 | 5 | 139 | 1.86e-13 | 66.6 |
| MS.gene25863.t1 | AT3G46720 | 34.286 | 140 | 62 | 4 | 12 | 129 | 6 | 137 | 4.42e-13 | 65.9 |
| MS.gene25863.t1 | AT2G36970 | 28.221 | 163 | 85 | 5 | 11 | 143 | 6 | 166 | 5.04e-13 | 65.5 |
| MS.gene25863.t1 | AT3G46670 | 32.432 | 148 | 67 | 5 | 11 | 133 | 2 | 141 | 5.48e-13 | 65.5 |
| MS.gene25863.t1 | AT2G28080 | 31.126 | 151 | 76 | 5 | 19 | 143 | 22 | 170 | 5.80e-13 | 65.5 |
| MS.gene25863.t1 | AT3G46690 | 32.857 | 140 | 65 | 5 | 12 | 129 | 6 | 138 | 7.69e-13 | 65.1 |
| MS.gene25863.t1 | AT4G15490 | 31.373 | 153 | 81 | 4 | 15 | 143 | 8 | 160 | 1.18e-12 | 64.7 |
| MS.gene25863.t1 | AT5G59580 | 33.566 | 143 | 65 | 5 | 13 | 133 | 7 | 141 | 2.00e-12 | 63.9 |
| MS.gene25863.t1 | AT5G59590 | 31.724 | 145 | 68 | 4 | 12 | 133 | 7 | 143 | 8.90e-12 | 62.0 |
| MS.gene25863.t1 | AT3G11340 | 27.389 | 157 | 85 | 4 | 11 | 147 | 5 | 152 | 1.92e-11 | 60.8 |
| MS.gene25863.t1 | AT2G26480 | 32.061 | 131 | 63 | 3 | 17 | 129 | 10 | 132 | 2.48e-11 | 60.8 |
| MS.gene25863.t1 | AT4G15500 | 30.000 | 150 | 85 | 4 | 14 | 143 | 8 | 157 | 5.68e-11 | 59.7 |
Find 30 sgRNAs with CRISPR-Local
Find 40 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGGAACTGCGGGCTTTGC+TGG | 0.244090 | 3.2:-69905160 | MS.gene25863:CDS |
| TGGAAGAGTGGCAAAAGATT+TGG | 0.286279 | 3.2:-69905140 | MS.gene25863:CDS |
| TGCTTCTGCTTGTGGTTTGT+TGG | 0.295992 | 3.2:-69905092 | MS.gene25863:CDS |
| GGAAGAGTGGCAAAAGATTT+GGG | 0.303715 | 3.2:-69905139 | MS.gene25863:CDS |
| ACCTTTGCAACGAAAGAGTT+TGG | 0.313608 | 3.2:+69905440 | None:intergenic |
| TACGAGATGAGCTTGTTAAC+AGG | 0.360862 | 3.2:-69905058 | MS.gene25863:CDS |
| GGATTCAAGAACTAGTGTTT+TGG | 0.364043 | 3.2:-69905117 | MS.gene25863:CDS |
| ATAGTCTCAAACTGAAAATC+TGG | 0.364820 | 3.2:+69905336 | None:intergenic |
| GCTTCTGCTTGTGGTTTGTT+GGG | 0.367296 | 3.2:-69905091 | MS.gene25863:CDS |
| AAACGTTTGATTAAATCTCT+TGG | 0.397744 | 3.2:-69905381 | MS.gene25863:CDS |
| ACATGACCTTGTACTGGAAA+TGG | 0.407592 | 3.2:+69905483 | None:intergenic |
| GAGATTTAATCAAACGTTTG+TGG | 0.448636 | 3.2:+69905385 | None:intergenic |
| TCAGATTCGGGTAAACCATC+AGG | 0.456156 | 3.2:+69905312 | None:intergenic |
| CTTGGAGCAGAGTTTCTAAA+GGG | 0.476848 | 3.2:-69905363 | MS.gene25863:CDS |
| AGTTTGGCAAGTTGCATGAA+AGG | 0.495243 | 3.2:+69905456 | None:intergenic |
| TCTTGGAGCAGAGTTTCTAA+AGG | 0.495785 | 3.2:-69905364 | MS.gene25863:CDS |
| GCCAAACTCTTTCGTTGCAA+AGG | 0.497840 | 3.2:-69905441 | MS.gene25863:CDS |
| TTTGTACCATTTCCAGTACA+AGG | 0.498943 | 3.2:-69905489 | MS.gene25863:CDS |
| CAGTTTGAGACTATTCCTGA+TGG | 0.505144 | 3.2:-69905327 | MS.gene25863:CDS |
| GTTACTTGCATAATTGCTGA+TGG | 0.513827 | 3.2:-69905178 | MS.gene25863:CDS |
| GTTTGGCAAGTTGCATGAAA+GGG | 0.520091 | 3.2:+69905457 | None:intergenic |
| GGGTTCACATGACCTTGTAC+TGG | 0.527592 | 3.2:+69905477 | None:intergenic |
| ATAATTGCTGATGGAACTGC+GGG | 0.534443 | 3.2:-69905169 | MS.gene25863:CDS |
| TGCGGGCTTTGCTGGAAGAG+TGG | 0.571532 | 3.2:-69905152 | MS.gene25863:CDS |
| ACGAGATGAGCTTGTTAACA+GGG | 0.590282 | 3.2:-69905057 | MS.gene25863:CDS |
| CATAATTGCTGATGGAACTG+CGG | 0.630778 | 3.2:-69905170 | MS.gene25863:CDS |
| AATGGTACAAATACAGCATG+AGG | 0.637882 | 3.2:+69905501 | None:intergenic |
| GAAGAGTGGCAAAAGATTTG+GGG | 0.639147 | 3.2:-69905138 | MS.gene25863:CDS |
| GTTGAATTCAGTGTTCACAA+AGG | 0.652579 | 3.2:+69905407 | None:intergenic |
| CGAGATGAGCTTGTTAACAG+GGG | 0.695031 | 3.2:-69905056 | MS.gene25863:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAACGTTTGATTAAATCTCT+TGG | - | chr3.2:69905201-69905220 | MS.gene25863:intron | 25.0% |
| !! | TGTTGCATTTTTATCAGATT+CGG | + | chr3.2:69905286-69905305 | None:intergenic | 25.0% |
| !!! | TTTTTCACAAGCTTTTTCAA+AGG | + | chr3.2:69905356-69905375 | None:intergenic | 25.0% |
| ATAGTCTCAAACTGAAAATC+TGG | + | chr3.2:69905249-69905268 | None:intergenic | 30.0% | |
| GAGATTTAATCAAACGTTTG+TGG | + | chr3.2:69905200-69905219 | None:intergenic | 30.0% | |
| ! | GTTGCATTTTTATCAGATTC+GGG | + | chr3.2:69905285-69905304 | None:intergenic | 30.0% |
| AATGGTACAAATACAGCATG+AGG | + | chr3.2:69905084-69905103 | None:intergenic | 35.0% | |
| GTTACTTGCATAATTGCTGA+TGG | - | chr3.2:69905404-69905423 | MS.gene25863:CDS | 35.0% | |
| GTTGAATTCAGTGTTCACAA+AGG | + | chr3.2:69905178-69905197 | None:intergenic | 35.0% | |
| TATCGTTATGTGAAGCAAGT+AGG | - | chr3.2:69905316-69905335 | MS.gene25863:CDS | 35.0% | |
| TCAGCAATTATGCAAGTAAC+TGG | + | chr3.2:69905404-69905423 | None:intergenic | 35.0% | |
| TTTGTACCATTTCCAGTACA+AGG | - | chr3.2:69905093-69905112 | MS.gene25863:CDS | 35.0% | |
| ! | GGATTCAAGAACTAGTGTTT+TGG | - | chr3.2:69905465-69905484 | MS.gene25863:CDS | 35.0% |
| ACATGACCTTGTACTGGAAA+TGG | + | chr3.2:69905102-69905121 | None:intergenic | 40.0% | |
| ACCTTTGCAACGAAAGAGTT+TGG | + | chr3.2:69905145-69905164 | None:intergenic | 40.0% | |
| AGTTTGGCAAGTTGCATGAA+AGG | + | chr3.2:69905129-69905148 | None:intergenic | 40.0% | |
| ATAATTGCTGATGGAACTGC+GGG | - | chr3.2:69905413-69905432 | MS.gene25863:CDS | 40.0% | |
| CATAATTGCTGATGGAACTG+CGG | - | chr3.2:69905412-69905431 | MS.gene25863:CDS | 40.0% | |
| CTTGGAGCAGAGTTTCTAAA+GGG | - | chr3.2:69905219-69905238 | MS.gene25863:intron | 40.0% | |
| GAAGAGTGGCAAAAGATTTG+GGG | - | chr3.2:69905444-69905463 | MS.gene25863:CDS | 40.0% | |
| GGAAGAGTGGCAAAAGATTT+GGG | - | chr3.2:69905443-69905462 | MS.gene25863:CDS | 40.0% | |
| GTTTGGCAAGTTGCATGAAA+GGG | + | chr3.2:69905128-69905147 | None:intergenic | 40.0% | |
| TCTTGGAGCAGAGTTTCTAA+AGG | - | chr3.2:69905218-69905237 | MS.gene25863:intron | 40.0% | |
| TGGAAGAGTGGCAAAAGATT+TGG | - | chr3.2:69905442-69905461 | MS.gene25863:CDS | 40.0% | |
| ! | ATACAGCATGAGGCTTTTGT+TGG | + | chr3.2:69905074-69905093 | None:intergenic | 40.0% |
| ! | CAGTTTGAGACTATTCCTGA+TGG | - | chr3.2:69905255-69905274 | MS.gene25863:intron | 40.0% |
| ! | TACAGCATGAGGCTTTTGTT+GGG | + | chr3.2:69905073-69905092 | None:intergenic | 40.0% |
| !! | ACGAGATGAGCTTGTTAACA+GGG | - | chr3.2:69905525-69905544 | MS.gene25863:CDS | 40.0% |
| !! | TACGAGATGAGCTTGTTAAC+AGG | - | chr3.2:69905524-69905543 | MS.gene25863:CDS | 40.0% |
| GCCAAACTCTTTCGTTGCAA+AGG | - | chr3.2:69905141-69905160 | MS.gene25863:CDS | 45.0% | |
| TCAGATTCGGGTAAACCATC+AGG | + | chr3.2:69905273-69905292 | None:intergenic | 45.0% | |
| ! | TGAGGCTTTTGTTGGGTATG+CGG | + | chr3.2:69905066-69905085 | None:intergenic | 45.0% |
| ! | TGCTTCTGCTTGTGGTTTGT+TGG | - | chr3.2:69905490-69905509 | MS.gene25863:CDS | 45.0% |
| ! | TTTTGGACTGCTTCTGCTTG+TGG | - | chr3.2:69905482-69905501 | MS.gene25863:CDS | 45.0% |
| !! | CGAGATGAGCTTGTTAACAG+GGG | - | chr3.2:69905526-69905545 | MS.gene25863:CDS | 45.0% |
| !! | GCTTCTGCTTGTGGTTTGTT+GGG | - | chr3.2:69905491-69905510 | MS.gene25863:CDS | 45.0% |
| GGGTTCACATGACCTTGTAC+TGG | + | chr3.2:69905108-69905127 | None:intergenic | 50.0% | |
| ! | CTTTTGTTGGGTATGCGGAG+AGG | + | chr3.2:69905061-69905080 | None:intergenic | 50.0% |
| GATGGAACTGCGGGCTTTGC+TGG | - | chr3.2:69905422-69905441 | MS.gene25863:CDS | 60.0% | |
| TGCGGGCTTTGCTGGAAGAG+TGG | - | chr3.2:69905430-69905449 | MS.gene25863:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 69905042 | 69905562 | 69905042 | ID=MS.gene25863 |
| chr3.2 | mRNA | 69905042 | 69905562 | 69905042 | ID=MS.gene25863.t1;Parent=MS.gene25863 |
| chr3.2 | exon | 69905271 | 69905562 | 69905271 | ID=MS.gene25863.t1.exon1;Parent=MS.gene25863.t1 |
| chr3.2 | CDS | 69905271 | 69905562 | 69905271 | ID=cds.MS.gene25863.t1;Parent=MS.gene25863.t1 |
| chr3.2 | exon | 69905042 | 69905199 | 69905042 | ID=MS.gene25863.t1.exon2;Parent=MS.gene25863.t1 |
| chr3.2 | CDS | 69905042 | 69905199 | 69905042 | ID=cds.MS.gene25863.t1;Parent=MS.gene25863.t1 |
| Gene Sequence |
| Protein sequence |
