Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25959.t1 | XP_003601278.1 | 98.3 | 767 | 13 | 0 | 1 | 767 | 1 | 767 | 0.00E+00 | 1399 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25959.t1 | F4HSX9 | 56.7 | 705 | 227 | 6 | 54 | 756 | 14 | 642 | 2.3e-211 | 736.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25959.t1 | G7J5H3 | 98.3 | 767 | 13 | 0 | 1 | 767 | 29 | 795 | 0.0e+00 | 1399.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02122 | MS.gene25959 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25959.t1 | MTR_3g077950 | 98.305 | 767 | 13 | 0 | 1 | 767 | 1 | 767 | 0.0 | 1548 |
| MS.gene25959.t1 | MTR_3g077950 | 98.305 | 767 | 13 | 0 | 1 | 767 | 29 | 795 | 0.0 | 1545 |
| MS.gene25959.t1 | MTR_4g106900 | 71.945 | 581 | 161 | 2 | 176 | 754 | 88 | 668 | 0.0 | 855 |
| MS.gene25959.t1 | MTR_6g007110 | 65.054 | 558 | 180 | 5 | 213 | 766 | 152 | 698 | 0.0 | 737 |
| MS.gene25959.t1 | MTR_6g007110 | 51.724 | 116 | 45 | 3 | 17 | 122 | 8 | 122 | 4.44e-20 | 95.9 |
| MS.gene25959.t1 | MTR_8g099745 | 62.992 | 508 | 187 | 1 | 252 | 758 | 64 | 571 | 0.0 | 692 |
| MS.gene25959.t1 | MTR_8g027385 | 60.990 | 505 | 195 | 1 | 253 | 757 | 52 | 554 | 0.0 | 653 |
| MS.gene25959.t1 | MTR_6g007110 | 64.826 | 489 | 158 | 4 | 213 | 698 | 152 | 629 | 0.0 | 652 |
| MS.gene25959.t1 | MTR_6g007110 | 51.724 | 116 | 45 | 3 | 17 | 122 | 8 | 122 | 3.42e-20 | 95.9 |
| MS.gene25959.t1 | MTR_1g070145 | 26.523 | 509 | 358 | 6 | 245 | 746 | 83 | 582 | 8.84e-43 | 165 |
| MS.gene25959.t1 | MTR_2g023050 | 67.368 | 95 | 30 | 1 | 667 | 760 | 3 | 97 | 9.80e-36 | 132 |
| MS.gene25959.t1 | MTR_6g006830 | 63.265 | 49 | 18 | 0 | 490 | 538 | 19 | 67 | 7.47e-17 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25959.t1 | AT1G27500 | 65.809 | 544 | 174 | 4 | 221 | 756 | 114 | 653 | 0.0 | 731 |
| MS.gene25959.t1 | AT1G27500 | 48.148 | 81 | 42 | 0 | 54 | 134 | 25 | 105 | 1.10e-15 | 81.6 |
| MS.gene25959.t1 | AT1G27500 | 65.809 | 544 | 174 | 4 | 221 | 756 | 103 | 642 | 0.0 | 730 |
| MS.gene25959.t1 | AT1G27500 | 48.148 | 81 | 42 | 0 | 54 | 134 | 14 | 94 | 1.22e-15 | 81.6 |
| MS.gene25959.t1 | AT3G27960 | 63.603 | 544 | 187 | 3 | 229 | 761 | 114 | 657 | 0.0 | 711 |
| MS.gene25959.t1 | AT3G27960 | 46.847 | 111 | 41 | 4 | 34 | 143 | 19 | 112 | 3.73e-12 | 70.5 |
| MS.gene25959.t1 | AT3G27960 | 63.603 | 544 | 187 | 3 | 229 | 761 | 114 | 657 | 0.0 | 711 |
| MS.gene25959.t1 | AT3G27960 | 46.847 | 111 | 41 | 4 | 34 | 143 | 19 | 112 | 3.73e-12 | 70.5 |
| MS.gene25959.t1 | AT4G10840 | 57.913 | 575 | 223 | 6 | 195 | 758 | 25 | 591 | 0.0 | 669 |
| MS.gene25959.t1 | AT3G27960 | 63.825 | 481 | 163 | 3 | 229 | 698 | 114 | 594 | 0.0 | 638 |
| MS.gene25959.t1 | AT3G27960 | 43.182 | 132 | 51 | 5 | 13 | 143 | 4 | 112 | 3.29e-12 | 70.5 |
| MS.gene25959.t1 | AT4G10840 | 57.282 | 515 | 201 | 6 | 195 | 698 | 25 | 531 | 0.0 | 591 |
| MS.gene25959.t1 | AT2G31240 | 26.916 | 509 | 359 | 6 | 245 | 746 | 101 | 603 | 1.01e-39 | 156 |
Find 202 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGTCCAGAGGCATATTT+TGG | 0.153258 | 3.2:-68902659 | MS.gene25959:CDS |
| CTATATACTCCAAGCGTTTC+AGG | 0.160309 | 3.2:+68901749 | None:intergenic |
| CAGATGCCACTTCCGCTTCT+TGG | 0.253038 | 3.2:+68902386 | None:intergenic |
| TGGTATTGCTCTTAATCAAC+TGG | 0.262779 | 3.2:-68901867 | MS.gene25959:CDS |
| AGAGGAGGTGGAGGTGGAGG+GGG | 0.264395 | 3.2:-68903454 | MS.gene25959:CDS |
| GGAAGAGGAGGTGGAGGTGG+AGG | 0.285387 | 3.2:-68903457 | MS.gene25959:CDS |
| ATGAAACTGTTTGAGAAGTT+TGG | 0.293874 | 3.2:-68902919 | MS.gene25959:CDS |
| TGAGGAAGCAAAGAGTGTTT+TGG | 0.304839 | 3.2:-68901795 | MS.gene25959:CDS |
| AATGAGTCGCGTTGAGAATT+CGG | 0.307148 | 3.2:-68903055 | MS.gene25959:CDS |
| GAGAAGAAATCATCCTTCTT+TGG | 0.307647 | 3.2:-68901887 | MS.gene25959:CDS |
| ACCCCATCATCCTGGAAATT+AGG | 0.314654 | 3.2:+68903642 | None:intergenic |
| AAGGTTGAGTGATTTGTTAA+AGG | 0.318973 | 3.2:-68901100 | MS.gene25959:CDS |
| CGGAATTGCACCATTTGGTT+GGG | 0.324212 | 3.2:-68903506 | MS.gene25959:CDS |
| TCAGCAGCTTCTTCAATAGA+TGG | 0.329233 | 3.2:+68902505 | None:intergenic |
| ATCACAAAACTTCGTGCTAT+TGG | 0.329949 | 3.2:-68901911 | MS.gene25959:CDS |
| TGGATGATTCTCTCCTTTGC+TGG | 0.330223 | 3.2:+68902273 | None:intergenic |
| TGTTGACTTTCCCCGATATC+AGG | 0.331061 | 3.2:+68902781 | None:intergenic |
| AATGGAAGAGGAGGTGGAGG+TGG | 0.332230 | 3.2:-68903460 | MS.gene25959:CDS |
| TGGTGAAACTTGTCGGTATT+TGG | 0.339201 | 3.2:-68902617 | MS.gene25959:CDS |
| CATGCTCTTGCTAAATTTGC+CGG | 0.339227 | 3.2:-68902757 | MS.gene25959:CDS |
| GAGGAGGTGGAGGTGGAGGG+GGG | 0.339394 | 3.2:-68903453 | MS.gene25959:CDS |
| AAACAAACTAGAGGAGTTAA+TGG | 0.352716 | 3.2:-68903120 | MS.gene25959:CDS |
| TGCGAGCGTCGCCGTCAAAA+AGG | 0.357744 | 3.2:+68901034 | None:intergenic |
| CTTGCTTGCTTTAGTAATAT+CGG | 0.357866 | 3.2:+68903000 | None:intergenic |
| GATGAGGGAGCTGGAGATAA+TGG | 0.359970 | 3.2:-68903478 | MS.gene25959:CDS |
| GAATTCAAAGAATTCTCCTT+TGG | 0.361948 | 3.2:-68903091 | MS.gene25959:CDS |
| ACCCCGTTTGTAACAATTCC+CGG | 0.363264 | 3.2:+68903783 | None:intergenic |
| TCGATTGAGATTCCTGATAT+CGG | 0.368583 | 3.2:-68902793 | MS.gene25959:CDS |
| AAGAGGAGGTGGAGGTGGAG+GGG | 0.369474 | 3.2:-68903455 | MS.gene25959:CDS |
| GGAGTATATAGTAATCTTGC+AGG | 0.374241 | 3.2:-68901737 | MS.gene25959:CDS |
| GAACTCCTTGGAGACTTGAT+TGG | 0.374643 | 3.2:+68903696 | None:intergenic |
| AGGGTCGGTCTTTGTACGTT+TGG | 0.381995 | 3.2:-68902245 | MS.gene25959:CDS |
| GTTTGGCTGACTTGTATAAC+AGG | 0.382339 | 3.2:-68902228 | MS.gene25959:CDS |
| TCTAGTGGGGAAACATCTTC+TGG | 0.391241 | 3.2:-68903411 | MS.gene25959:CDS |
| TTGTCAAACCACTGAATTCA+AGG | 0.391923 | 3.2:-68903236 | MS.gene25959:CDS |
| ATTGTTACAAACGGGGTTCA+TGG | 0.395239 | 3.2:-68903777 | MS.gene25959:CDS |
| TGGTAATGGGAAGCCGAGTT+TGG | 0.395609 | 3.2:-68902899 | MS.gene25959:CDS |
| GTGTGCAGCGTTATGCCTTA+AGG | 0.399879 | 3.2:-68901835 | MS.gene25959:CDS |
| TGATTCGGAATTGCACCATT+TGG | 0.399915 | 3.2:-68903511 | MS.gene25959:CDS |
| GGAGATAATGGAAGAGGAGG+TGG | 0.401440 | 3.2:-68903466 | MS.gene25959:CDS |
| TCGCCCTCGAGACAAAGTTT+TGG | 0.402595 | 3.2:-68903558 | MS.gene25959:CDS |
| CGATTGAGATTCCTGATATC+GGG | 0.404768 | 3.2:-68902792 | MS.gene25959:CDS |
| TGGGAAGCCGAGTTTGGAAT+TGG | 0.408392 | 3.2:-68902893 | MS.gene25959:CDS |
| AATTCAAAGAATTCTCCTTT+GGG | 0.410118 | 3.2:-68903090 | MS.gene25959:CDS |
| TGGAGCACGTTGTTAGTATG+AGG | 0.413215 | 3.2:-68901170 | MS.gene25959:CDS |
| TGCCGGGAATTGTTACAAAC+GGG | 0.416439 | 3.2:-68903785 | MS.gene25959:CDS |
| ATTTGCAACCATTGCCATGC+TGG | 0.416716 | 3.2:+68902411 | None:intergenic |
| GTCCTAATTTCCAGGATGAT+GGG | 0.417051 | 3.2:-68903644 | MS.gene25959:CDS |
| GCTATTGTTCCTTGCTGACC+AGG | 0.418541 | 3.2:+68902013 | None:intergenic |
| CTCTCCAGAGGAGCTTTAGC+AGG | 0.418882 | 3.2:+68903165 | None:intergenic |
| AGTAATATCGGTGCTCGCTC+TGG | 0.418974 | 3.2:+68903012 | None:intergenic |
| GCAAGAGATCTTATGTCAAC+TGG | 0.419614 | 3.2:-68902982 | MS.gene25959:CDS |
| GGATGATGCAATTCTAACTT+TGG | 0.420399 | 3.2:-68901190 | MS.gene25959:CDS |
| AAGCGTTGGTCCTAATTTCC+AGG | 0.424656 | 3.2:-68903652 | MS.gene25959:CDS |
| TCCTCCTGCTAAAGCTCCTC+TGG | 0.425124 | 3.2:-68903169 | MS.gene25959:CDS |
| CTCAATCGAACGCTCAAGAA+TGG | 0.425249 | 3.2:+68902807 | None:intergenic |
| GGTCCTAATTTCCAGGATGA+TGG | 0.425860 | 3.2:-68903645 | MS.gene25959:CDS |
| TGTTTGAGAAGTTTGGTAAT+GGG | 0.426594 | 3.2:-68902912 | MS.gene25959:CDS |
| CTGTTTGAGAAGTTTGGTAA+TGG | 0.428608 | 3.2:-68902913 | MS.gene25959:CDS |
| CGACAAGTTTCACCAACTCT+TGG | 0.428964 | 3.2:+68902625 | None:intergenic |
| TTTATCTGATGATAAGAAGT+TGG | 0.431998 | 3.2:-68903379 | MS.gene25959:CDS |
| TCAATAATGTTCTACACTGC+TGG | 0.436270 | 3.2:-68902685 | MS.gene25959:CDS |
| TGTGCAGCGTTATGCCTTAA+GGG | 0.442956 | 3.2:-68901834 | MS.gene25959:CDS |
| TAACAGGACAGGGAAGATAA+AGG | 0.443611 | 3.2:-68902212 | MS.gene25959:CDS |
| GTCAATGAATGAGGTTGATC+AGG | 0.448692 | 3.2:-68902080 | MS.gene25959:CDS |
| TAATTCTATAGCTTCCCTTA+AGG | 0.449230 | 3.2:+68901820 | None:intergenic |
| CGCAGCAATATATTGCAGCC+TGG | 0.453642 | 3.2:-68902851 | MS.gene25959:CDS |
| GAAGAGGAGGTGGAGGTGGA+GGG | 0.453852 | 3.2:-68903456 | MS.gene25959:CDS |
| GATAATGGAAGAGGAGGTGG+AGG | 0.458491 | 3.2:-68903463 | MS.gene25959:CDS |
| TGGAGTTAAACTTTCCTTAG+TGG | 0.459596 | 3.2:+68903716 | None:intergenic |
| GCAGGCACGTACGACGCAAT+TGG | 0.460085 | 3.2:-68901719 | MS.gene25959:CDS |
| TCGGAATTGCACCATTTGGT+TGG | 0.461069 | 3.2:-68903507 | MS.gene25959:CDS |
| TATATACTCCAAGCGTTTCA+GGG | 0.461186 | 3.2:+68901750 | None:intergenic |
| TTTAAACAACCTTGTCATCA+AGG | 0.463538 | 3.2:-68901010 | MS.gene25959:CDS |
| GGTCTTATATGTGAAACAAA+GGG | 0.464250 | 3.2:-68902469 | MS.gene25959:CDS |
| GACAAGTTTCACCAACTCTT+GGG | 0.466081 | 3.2:+68902626 | None:intergenic |
| TCCCCACTAGAACTCTCTCC+TGG | 0.466231 | 3.2:+68903423 | None:intergenic |
| GGGGTTATGTATTACATGTT+GGG | 0.468336 | 3.2:-68901971 | MS.gene25959:CDS |
| CAAACCACTGAATTCAAGGT+TGG | 0.471026 | 3.2:-68903232 | MS.gene25959:CDS |
| GGAAGCTATAGAATTATTTG+AGG | 0.473262 | 3.2:-68901813 | MS.gene25959:CDS |
| TGATGATAAGAAGTTGGATA+TGG | 0.475057 | 3.2:-68903373 | MS.gene25959:CDS |
| GTCTCCAAGTTGCATGTGAC+CGG | 0.476378 | 3.2:+68902738 | None:intergenic |
| CTATTGAAGAAGCTGCTGAT+AGG | 0.478081 | 3.2:-68902501 | MS.gene25959:CDS |
| TGGAGACACCTATGCTATGT+TGG | 0.481996 | 3.2:-68902722 | MS.gene25959:CDS |
| CACATAACCAATTCCAAACT+CGG | 0.483673 | 3.2:+68902886 | None:intergenic |
| TGATGAGTCTAGAATTGATT+CGG | 0.484230 | 3.2:-68903526 | MS.gene25959:CDS |
| AGCATGGCAATGGTTGCAAA+TGG | 0.484872 | 3.2:-68902409 | MS.gene25959:CDS |
| CAGCCTCGTCATATCGAGAC+AGG | 0.487359 | 3.2:+68902332 | None:intergenic |
| GGGGAAACATCTTCTGGAAT+GGG | 0.488806 | 3.2:-68903405 | MS.gene25959:CDS |
| CAAGTTACTGCAGAAGGCAT+TGG | 0.489151 | 3.2:-68902053 | MS.gene25959:CDS |
| GGAGCTGGAGATAATGGAAG+AGG | 0.489221 | 3.2:-68903472 | MS.gene25959:CDS |
| GCTCAACAACCCCATCATCC+TGG | 0.489936 | 3.2:+68903634 | None:intergenic |
| ATTAAGAGCAATACCAAAGA+AGG | 0.492243 | 3.2:+68901874 | None:intergenic |
| CAGCAGCTTCTTCAATAGAT+GGG | 0.492737 | 3.2:+68902506 | None:intergenic |
| ACAAACGGGGTTCATGGCGA+TGG | 0.494013 | 3.2:-68903771 | MS.gene25959:CDS |
| GGTATTGCTCTTAATCAACT+GGG | 0.495438 | 3.2:-68901866 | MS.gene25959:CDS |
| AGCAGAGGAGCTCTGTCAAA+TGG | 0.496719 | 3.2:-68902560 | MS.gene25959:CDS |
| CAAGAGTTGGTGAAACTTGT+CGG | 0.496966 | 3.2:-68902624 | MS.gene25959:CDS |
| CCGGTGATTGAGATTCAATC+TGG | 0.498243 | 3.2:-68903321 | MS.gene25959:CDS |
| CTTATCAGGCCTTGATGACA+AGG | 0.498399 | 3.2:+68901001 | None:intergenic |
| GGAGTTAAACTTTCCTTAGT+GGG | 0.499590 | 3.2:+68903717 | None:intergenic |
| ATGCCGGGAATTGTTACAAA+CGG | 0.499833 | 3.2:-68903786 | MS.gene25959:CDS |
| CCAAGCGTTTCAGGGTGATA+AGG | 0.500209 | 3.2:+68901758 | None:intergenic |
| TGGGGAAACATCTTCTGGAA+TGG | 0.500676 | 3.2:-68903406 | MS.gene25959:CDS |
| TTTGCCGGTCACATGCAACT+TGG | 0.500974 | 3.2:-68902742 | MS.gene25959:CDS |
| AGACCGCTAGCAATCTCCTC+TGG | 0.501919 | 3.2:+68902127 | None:intergenic |
| TGTGGACTCATTGAACTCCT+TGG | 0.504396 | 3.2:+68903684 | None:intergenic |
| GGAATTGCACCATTTGGTTG+GGG | 0.505497 | 3.2:-68903505 | MS.gene25959:CDS |
| CAAACGGGGTTCATGGCGAT+GGG | 0.505611 | 3.2:-68903770 | MS.gene25959:CDS |
| ACAAAGACCGACCCTACTGC+TGG | 0.507046 | 3.2:+68902253 | None:intergenic |
| TTTCTCCCAAAATATGCCTC+TGG | 0.508008 | 3.2:+68902653 | None:intergenic |
| TCAATCGAACGCTCAAGAAT+GGG | 0.508874 | 3.2:+68902808 | None:intergenic |
| GCATCTGTTGACTGCAGCAT+TGG | 0.511790 | 3.2:-68902370 | MS.gene25959:CDS |
| GGAGACACCTATGCTATGTT+GGG | 0.514722 | 3.2:-68902721 | MS.gene25959:CDS |
| CTATTGTTCCTTGCTGACCA+GGG | 0.516960 | 3.2:+68902014 | None:intergenic |
| GCTGACTTGTATAACAGGAC+AGG | 0.521984 | 3.2:-68902223 | MS.gene25959:CDS |
| ATATATGAGAATCCAATGCC+TGG | 0.522080 | 3.2:-68902157 | MS.gene25959:CDS |
| TCAATCTGGTAGTAAAAGTC+CGG | 0.522430 | 3.2:-68903307 | MS.gene25959:CDS |
| TCAATCTGGTAGTAAAAGTC+CGG | 0.522430 | 3.2:-68903340 | MS.gene25959:CDS |
| AAACCACTGAATTCAAGGTT+GGG | 0.523272 | 3.2:-68903231 | MS.gene25959:CDS |
| GGAGAGAATCATCCAGCAGT+AGG | 0.523946 | 3.2:-68902265 | MS.gene25959:CDS |
| ATGGTGGCTGAGATTCAATC+TGG | 0.526317 | 3.2:-68903354 | MS.gene25959:CDS |
| GAATTCGAAGCAGAAAAGTC+AGG | 0.526447 | 3.2:-68901068 | MS.gene25959:CDS |
| TCCTAATTTCCAGGATGATG+GGG | 0.527955 | 3.2:-68903643 | MS.gene25959:CDS |
| AGTGATTTGTTAAAGGAAGC+CGG | 0.532534 | 3.2:-68901093 | MS.gene25959:CDS |
| CCTTATCACCCTGAAACGCT+TGG | 0.533024 | 3.2:-68901758 | MS.gene25959:CDS |
| ATCTCCTCTGGAGTAACTCC+AGG | 0.533475 | 3.2:+68902139 | None:intergenic |
| ACGATCTAGTAGTAAAAGTC+CGG | 0.534457 | 3.2:-68903274 | MS.gene25959:CDS |
| AAATGGCCAAGAAGCGGAAG+TGG | 0.534737 | 3.2:-68902392 | MS.gene25959:CDS |
| TGTGAACAATTCTCCCACTA+AGG | 0.536500 | 3.2:-68903730 | MS.gene25959:CDS |
| AGCTGCTGATAGGAGGCTCA+TGG | 0.537279 | 3.2:-68902491 | MS.gene25959:CDS |
| GGTCAGCAAGGAACAATAGC+AGG | 0.538063 | 3.2:-68902010 | MS.gene25959:CDS |
| CTGAGAGAATTAAAGATGCC+GGG | 0.540648 | 3.2:-68903801 | None:intergenic |
| TCTGGAGTAACTCCAGGCAT+TGG | 0.542481 | 3.2:+68902145 | None:intergenic |
| GGGTCTTATATGTGAAACAA+AGG | 0.545385 | 3.2:-68902470 | MS.gene25959:CDS |
| AATAGCAGGAATCGAAGCTC+AGG | 0.546276 | 3.2:-68901996 | MS.gene25959:CDS |
| GGCACTCAAGTTACTGCAGA+AGG | 0.552539 | 3.2:-68902059 | MS.gene25959:CDS |
| GAGCCCAACCTTGAATTCAG+TGG | 0.557395 | 3.2:+68903228 | None:intergenic |
| GGAGCACGTTGTTAGTATGA+GGG | 0.558173 | 3.2:-68901169 | MS.gene25959:CDS |
| CATTCATAGAGAAAATAGTT+CGG | 0.559898 | 3.2:-68902530 | MS.gene25959:CDS |
| AGGCCAGGAGAGAGTTCTAG+TGG | 0.560737 | 3.2:-68903426 | MS.gene25959:CDS |
| CTAGATCGTGTCTTAACCAC+CGG | 0.564205 | 3.2:+68903288 | None:intergenic |
| TCATAAAGCTGCTCGATCGA+AGG | 0.567443 | 3.2:+68903612 | None:intergenic |
| GCTGGAGATAATGGAAGAGG+AGG | 0.567552 | 3.2:-68903469 | MS.gene25959:CDS |
| TGATCATTCTTTCTCTCCAG+AGG | 0.571551 | 3.2:+68903153 | None:intergenic |
| GGAGAAACAGACCCAAGAGT+TGG | 0.572030 | 3.2:-68902637 | MS.gene25959:CDS |
| GCAGCAATATATTGCAGCCT+GGG | 0.572631 | 3.2:-68902850 | MS.gene25959:CDS |
| TTGAAGAAGCTGCTGATAGG+AGG | 0.574364 | 3.2:-68902498 | MS.gene25959:CDS |
| GAGAGAATCATCCAGCAGTA+GGG | 0.578129 | 3.2:-68902264 | MS.gene25959:CDS |
| AATGATGCCCCTGGTCAGCA+AGG | 0.578324 | 3.2:-68902022 | MS.gene25959:CDS |
| GAGATATATAATGATGCCCC+TGG | 0.582463 | 3.2:-68902031 | MS.gene25959:CDS |
| CCAGATTGAATCTCAATCAC+CGG | 0.584520 | 3.2:+68903321 | None:intergenic |
| TATTGTTCCTTGCTGACCAG+GGG | 0.586144 | 3.2:+68902015 | None:intergenic |
| TATCTATGAGTCAATGAATG+AGG | 0.586376 | 3.2:-68902089 | MS.gene25959:CDS |
| GAATTGCACCATTTGGTTGG+GGG | 0.586590 | 3.2:-68903504 | MS.gene25959:CDS |
| ACATTATTGAATTCTCAAGC+TGG | 0.587320 | 3.2:+68902698 | None:intergenic |
| TTTGCAATTTAATGAAGCAG+AGG | 0.589536 | 3.2:-68902575 | MS.gene25959:CDS |
| TCCGCACAAAGCTCTTGAGT+TGG | 0.592177 | 3.2:-68902953 | MS.gene25959:CDS |
| GATCCAAAACTTTGTCTCGA+GGG | 0.596211 | 3.2:+68903555 | None:intergenic |
| TAACTCCAATCAAGTCTCCA+AGG | 0.600870 | 3.2:-68903701 | MS.gene25959:CDS |
| GGCCAGGAGAGAGTTCTAGT+GGG | 0.601609 | 3.2:-68903425 | MS.gene25959:CDS |
| AGCAGGAATCGAAGCTCAGG+TGG | 0.603399 | 3.2:-68901993 | MS.gene25959:CDS |
| GTATGAGGGAGGAAAAGCTC+GGG | 0.605021 | 3.2:-68901155 | MS.gene25959:CDS |
| GTATTGCTCTTAATCAACTG+GGG | 0.605860 | 3.2:-68901865 | MS.gene25959:CDS |
| GCACGTACGACGCAATTGGA+AGG | 0.606386 | 3.2:-68901715 | MS.gene25959:intron |
| GCTGCTGATAGGAGGCTCAT+GGG | 0.606688 | 3.2:-68902490 | MS.gene25959:CDS |
| AGGAATCGAAGCTCAGGTGG+GGG | 0.609143 | 3.2:-68901990 | MS.gene25959:CDS |
| GCAGGAATCGAAGCTCAGGT+GGG | 0.614855 | 3.2:-68901992 | MS.gene25959:CDS |
| AGATCCAAAACTTTGTCTCG+AGG | 0.615616 | 3.2:+68903554 | None:intergenic |
| CCACAGAGACGTCAAAGCGT+TGG | 0.622035 | 3.2:-68903666 | MS.gene25959:CDS |
| ACGTGGATGATGAAAAGAGA+AGG | 0.622587 | 3.2:-68901119 | MS.gene25959:CDS |
| CTGACTTGTATAACAGGACA+GGG | 0.625190 | 3.2:-68902222 | MS.gene25959:CDS |
| GGTTGCAAATGGCCAAGAAG+CGG | 0.627233 | 3.2:-68902398 | MS.gene25959:CDS |
| AAGCTGGCCCAACATAGCAT+AGG | 0.627553 | 3.2:+68902714 | None:intergenic |
| TTGCCATGCTGGCTAAAACA+AGG | 0.628402 | 3.2:+68902422 | None:intergenic |
| CAGGAATCGAAGCTCAGGTG+GGG | 0.630903 | 3.2:-68901991 | MS.gene25959:CDS |
| TCCAGAGGAGCTTTAGCAGG+AGG | 0.631409 | 3.2:+68903168 | None:intergenic |
| AGCAGCTTCTTCAATAGATG+GGG | 0.635291 | 3.2:+68902507 | None:intergenic |
| AGTATGAGGGAGGAAAAGCT+CGG | 0.639421 | 3.2:-68901156 | MS.gene25959:CDS |
| GATTGAGATTCCTGATATCG+GGG | 0.642295 | 3.2:-68902791 | MS.gene25959:CDS |
| GAATCATCCAGCAGTAGGGT+CGG | 0.642771 | 3.2:-68902260 | MS.gene25959:CDS |
| TTGCCTCACTATATCGACCC+AGG | 0.644043 | 3.2:+68902833 | None:intergenic |
| CCAACGCTTTGACGTCTCTG+TGG | 0.647529 | 3.2:+68903666 | None:intergenic |
| ATCTGGTAGTAAAAGTCCGG+TGG | 0.648715 | 3.2:-68903304 | MS.gene25959:CDS |
| ATTGACACTGACTTTCCCAA+AGG | 0.649299 | 3.2:+68903075 | None:intergenic |
| TGATAAGAAGTTGGATATGG+TGG | 0.651245 | 3.2:-68903370 | MS.gene25959:CDS |
| AAACGGGGTTCATGGCGATG+GGG | 0.651726 | 3.2:-68903769 | MS.gene25959:CDS |
| CAGCCTGGGTCGATATAGTG+AGG | 0.655422 | 3.2:-68902836 | MS.gene25959:CDS |
| GCCAACTCAAGAGCTTTGTG+CGG | 0.657377 | 3.2:+68902952 | None:intergenic |
| GTCTTATATGTGAAACAAAG+GGG | 0.658004 | 3.2:-68902468 | MS.gene25959:CDS |
| GCCAGGAGAGAGTTCTAGTG+GGG | 0.664478 | 3.2:-68903424 | MS.gene25959:CDS |
| ATCCCTGTCTCGATATGACG+AGG | 0.670357 | 3.2:-68902335 | MS.gene25959:CDS |
| TCACCAAGATCAAAACCCAA+AGG | 0.673652 | 3.2:-68903198 | MS.gene25959:CDS |
| GCACGTTGTTAGTATGAGGG+AGG | 0.676380 | 3.2:-68901166 | MS.gene25959:CDS |
| CAGGCTGCAATATATTGCTG+CGG | 0.679348 | 3.2:+68902852 | None:intergenic |
| GCCGGGAATTGTTACAAACG+GGG | 0.687272 | 3.2:-68903784 | MS.gene25959:CDS |
| TAAGGCATAACGCTGCACAC+AGG | 0.688937 | 3.2:+68901838 | None:intergenic |
| CCTTTGAGAAAACAAACTAG+AGG | 0.692430 | 3.2:-68903129 | MS.gene25959:CDS |
| AGCCTCGTCATATCGAGACA+GGG | 0.693208 | 3.2:+68902333 | None:intergenic |
| CGGGACAGCGAATCCCGACG+TGG | 0.696066 | 3.2:-68901136 | MS.gene25959:CDS |
| ACTCCAGAGGAGATTGCTAG+CGG | 0.697838 | 3.2:-68902130 | MS.gene25959:CDS |
| AATGCCTGGAGTTACTCCAG+AGG | 0.727468 | 3.2:-68902143 | MS.gene25959:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTTAAATTCATTATTT+TGG | - | chr3.2:68903358-68903377 | MS.gene25959:CDS | 10.0% |
| !!! | AACTTTTACTAATAAAAAGA+AGG | + | chr3.2:68903345-68903364 | None:intergenic | 15.0% |
| ! | AATTCAAAGAATTCTCCTTT+GGG | - | chr3.2:68901701-68901720 | MS.gene25959:intron | 25.0% |
| ! | ACAATACCTTGGTAAATTAA+AGG | + | chr3.2:68903179-68903198 | None:intergenic | 25.0% |
| ! | ATGTGAAATGATAACTGATT+CGG | - | chr3.2:68903270-68903289 | MS.gene25959:CDS | 25.0% |
| ! | CATTCATAGAGAAAATAGTT+CGG | - | chr3.2:68902261-68902280 | MS.gene25959:CDS | 25.0% |
| ! | CTTGGATAATCATAATCTAA+AGG | + | chr3.2:68903522-68903541 | None:intergenic | 25.0% |
| ! | GATTATGATTATCCAAGATA+TGG | - | chr3.2:68903525-68903544 | MS.gene25959:CDS | 25.0% |
| ! | TTTATCTGATGATAAGAAGT+TGG | - | chr3.2:68901412-68901431 | MS.gene25959:intron | 25.0% |
| AAACAAACTAGAGGAGTTAA+TGG | - | chr3.2:68901671-68901690 | MS.gene25959:intron | 30.0% | |
| AAAGATTTCATAGTTCCACA+AGG | + | chr3.2:68903473-68903492 | None:intergenic | 30.0% | |
| ACATTATTGAATTCTCAAGC+TGG | + | chr3.2:68902096-68902115 | None:intergenic | 30.0% | |
| ATGAAACTGTTTGAGAAGTT+TGG | - | chr3.2:68901872-68901891 | MS.gene25959:CDS | 30.0% | |
| ATTAAGAGCAATACCAAAGA+AGG | + | chr3.2:68902920-68902939 | None:intergenic | 30.0% | |
| CTTGCTTGCTTTAGTAATAT+CGG | + | chr3.2:68901794-68901813 | None:intergenic | 30.0% | |
| GAATTCAAAGAATTCTCCTT+TGG | - | chr3.2:68901700-68901719 | MS.gene25959:intron | 30.0% | |
| GGAAGCTATAGAATTATTTG+AGG | - | chr3.2:68902978-68902997 | MS.gene25959:CDS | 30.0% | |
| GTCTTATATGTGAAACAAAG+GGG | - | chr3.2:68902323-68902342 | MS.gene25959:CDS | 30.0% | |
| TAATTCTATAGCTTCCCTTA+AGG | + | chr3.2:68902974-68902993 | None:intergenic | 30.0% | |
| TATCTATGAGTCAATGAATG+AGG | - | chr3.2:68902702-68902721 | MS.gene25959:CDS | 30.0% | |
| TGATGATAAGAAGTTGGATA+TGG | - | chr3.2:68901418-68901437 | MS.gene25959:intron | 30.0% | |
| TGATTATCCAAGATATGGTT+TGG | - | chr3.2:68903530-68903549 | MS.gene25959:CDS | 30.0% | |
| TTTAAACAACCTTGTCATCA+AGG | - | chr3.2:68903781-68903800 | MS.gene25959:CDS | 30.0% | |
| TTTGCAATTTAATGAAGCAG+AGG | - | chr3.2:68902216-68902235 | MS.gene25959:CDS | 30.0% | |
| ! | GGTCTTATATGTGAAACAAA+GGG | - | chr3.2:68902322-68902341 | MS.gene25959:CDS | 30.0% |
| ! | TGATGAGTCTAGAATTGATT+CGG | - | chr3.2:68901265-68901284 | MS.gene25959:intron | 30.0% |
| ! | TGTTTGAGAAGTTTGGTAAT+GGG | - | chr3.2:68901879-68901898 | MS.gene25959:CDS | 30.0% |
| !! | AAAAGATTTGCTAGAAGAAG+CGG | + | chr3.2:68903132-68903151 | None:intergenic | 30.0% |
| !! | AAGGTTGAGTGATTTGTTAA+AGG | - | chr3.2:68903691-68903710 | MS.gene25959:CDS | 30.0% |
| !!! | ACAATTTTTTCTGAGGAAAC+CGG | + | chr3.2:68901539-68901558 | None:intergenic | 30.0% |
| !!! | TGGTTTGACAATTTTTTCTG+AGG | + | chr3.2:68901546-68901565 | None:intergenic | 30.0% |
| AAACCACTGAATTCAAGGTT+GGG | - | chr3.2:68901560-68901579 | MS.gene25959:intron | 35.0% | |
| ACGATCTAGTAGTAAAAGTC+CGG | - | chr3.2:68901517-68901536 | MS.gene25959:intron | 35.0% | |
| AGGGTTTGATCTTCTATTTC+AGG | - | chr3.2:68903576-68903595 | MS.gene25959:CDS | 35.0% | |
| ATAGAAGATCAAACCCTGTA+AGG | + | chr3.2:68903573-68903592 | None:intergenic | 35.0% | |
| ATATATGAGAATCCAATGCC+TGG | - | chr3.2:68902634-68902653 | MS.gene25959:CDS | 35.0% | |
| ATCACAAAACTTCGTGCTAT+TGG | - | chr3.2:68902880-68902899 | MS.gene25959:CDS | 35.0% | |
| CACATAACCAATTCCAAACT+CGG | + | chr3.2:68901908-68901927 | None:intergenic | 35.0% | |
| CAGTTATCATTTCACATGAG+TGG | + | chr3.2:68903267-68903286 | None:intergenic | 35.0% | |
| CTGTTTGAGAAGTTTGGTAA+TGG | - | chr3.2:68901878-68901897 | MS.gene25959:CDS | 35.0% | |
| GAGAAGAAATCATCCTTCTT+TGG | - | chr3.2:68902904-68902923 | MS.gene25959:CDS | 35.0% | |
| GGAGTATATAGTAATCTTGC+AGG | - | chr3.2:68903054-68903073 | MS.gene25959:CDS | 35.0% | |
| GGAGTTAAACTTTCCTTAGT+GGG | + | chr3.2:68901077-68901096 | None:intergenic | 35.0% | |
| GGATGATGCAATTCTAACTT+TGG | - | chr3.2:68903601-68903620 | MS.gene25959:CDS | 35.0% | |
| GGGGTTATGTATTACATGTT+GGG | - | chr3.2:68902820-68902839 | MS.gene25959:CDS | 35.0% | |
| GGTATTGCTCTTAATCAACT+GGG | - | chr3.2:68902925-68902944 | MS.gene25959:CDS | 35.0% | |
| GTATTGCTCTTAATCAACTG+GGG | - | chr3.2:68902926-68902945 | MS.gene25959:CDS | 35.0% | |
| TATATACTCCAAGCGTTTCA+GGG | + | chr3.2:68903044-68903063 | None:intergenic | 35.0% | |
| TCAATAATGTTCTACACTGC+TGG | - | chr3.2:68902106-68902125 | MS.gene25959:CDS | 35.0% | |
| TCAATCTGGTAGTAAAAGTC+CGG | - | chr3.2:68901451-68901470 | MS.gene25959:intron | 35.0% | |
| TCGATTGAGATTCCTGATAT+CGG | - | chr3.2:68901998-68902017 | MS.gene25959:CDS | 35.0% | |
| TGATAAGAAGTTGGATATGG+TGG | - | chr3.2:68901421-68901440 | MS.gene25959:intron | 35.0% | |
| TGGAGTTAAACTTTCCTTAG+TGG | + | chr3.2:68901078-68901097 | None:intergenic | 35.0% | |
| TGGTATTGCTCTTAATCAAC+TGG | - | chr3.2:68902924-68902943 | MS.gene25959:CDS | 35.0% | |
| TTGTCAAACCACTGAATTCA+AGG | - | chr3.2:68901555-68901574 | MS.gene25959:intron | 35.0% | |
| TTTGATCTTCTATTTCAGGC+TGG | - | chr3.2:68903580-68903599 | MS.gene25959:CDS | 35.0% | |
| ! | CCTTTGAGAAAACAAACTAG+AGG | - | chr3.2:68901662-68901681 | MS.gene25959:intron | 35.0% |
| ! | GAAGTTCTTTTCTCCTTACA+GGG | - | chr3.2:68903557-68903576 | MS.gene25959:CDS | 35.0% |
| ! | GGGTCTTATATGTGAAACAA+AGG | - | chr3.2:68902321-68902340 | MS.gene25959:CDS | 35.0% |
| ! | TCACTAGAGAACCTTTTTGA+CGG | - | chr3.2:68903746-68903765 | MS.gene25959:CDS | 35.0% |
| ! | TCAGCACCTTTAATTTACCA+AGG | - | chr3.2:68903170-68903189 | MS.gene25959:CDS | 35.0% |
| ! | TTTTCTGCTTCGAATTCTAC+CGG | + | chr3.2:68903720-68903739 | None:intergenic | 35.0% |
| !! | AGTGATTTGTTAAAGGAAGC+CGG | - | chr3.2:68903698-68903717 | MS.gene25959:CDS | 35.0% |
| !! | TTTCCTTTGGGTTTTGATCT+TGG | + | chr3.2:68901599-68901618 | None:intergenic | 35.0% |
| !!! | AGACAAAGTTTTGGATCTGA+CGG | - | chr3.2:68901242-68901261 | MS.gene25959:intron | 35.0% |
| !!! | AGTGTTTTGGAACATGAGTT+GGG | - | chr3.2:68903009-68903028 | MS.gene25959:CDS | 35.0% |
| !!! | CCTCTAGTTTGTTTTCTCAA+AGG | + | chr3.2:68901665-68901684 | None:intergenic | 35.0% |
| AATGAGTCGCGTTGAGAATT+CGG | - | chr3.2:68901736-68901755 | MS.gene25959:CDS | 40.0% | |
| ACGTGGATGATGAAAAGAGA+AGG | - | chr3.2:68903672-68903691 | MS.gene25959:CDS | 40.0% | |
| AGATCCAAAACTTTGTCTCG+AGG | + | chr3.2:68901240-68901259 | None:intergenic | 40.0% | |
| AGCAGCTTCTTCAATAGATG+GGG | + | chr3.2:68902287-68902306 | None:intergenic | 40.0% | |
| ATACTAGACCCCAAGAAAGA+AGG | - | chr3.2:68903420-68903439 | MS.gene25959:CDS | 40.0% | |
| ATGCCGGGAATTGTTACAAA+CGG | - | chr3.2:68901005-68901024 | MS.gene25959:CDS | 40.0% | |
| ATTGTTACAAACGGGGTTCA+TGG | - | chr3.2:68901014-68901033 | MS.gene25959:CDS | 40.0% | |
| CAAACCACTGAATTCAAGGT+TGG | - | chr3.2:68901559-68901578 | MS.gene25959:intron | 40.0% | |
| CAGCAGCTTCTTCAATAGAT+GGG | + | chr3.2:68902288-68902307 | None:intergenic | 40.0% | |
| CATGCTCTTGCTAAATTTGC+CGG | - | chr3.2:68902034-68902053 | MS.gene25959:CDS | 40.0% | |
| CCAGATTGAATCTCAATCAC+CGG | + | chr3.2:68901473-68901492 | None:intergenic | 40.0% | |
| CGATTGAGATTCCTGATATC+GGG | - | chr3.2:68901999-68902018 | MS.gene25959:CDS | 40.0% | |
| CTATATACTCCAAGCGTTTC+AGG | + | chr3.2:68903045-68903064 | None:intergenic | 40.0% | |
| CTATTGAAGAAGCTGCTGAT+AGG | - | chr3.2:68902290-68902309 | MS.gene25959:CDS | 40.0% | |
| GAATTCGAAGCAGAAAAGTC+AGG | - | chr3.2:68903723-68903742 | MS.gene25959:CDS | 40.0% | |
| GACAAGTTTCACCAACTCTT+GGG | + | chr3.2:68902168-68902187 | None:intergenic | 40.0% | |
| GAGATATATAATGATGCCCC+TGG | - | chr3.2:68902760-68902779 | MS.gene25959:CDS | 40.0% | |
| GATCCAAAACTTTGTCTCGA+GGG | + | chr3.2:68901239-68901258 | None:intergenic | 40.0% | |
| GATTGAGATTCCTGATATCG+GGG | - | chr3.2:68902000-68902019 | MS.gene25959:CDS | 40.0% | |
| GCAAGAGATCTTATGTCAAC+TGG | - | chr3.2:68901809-68901828 | MS.gene25959:CDS | 40.0% | |
| GGGGGTTATGTATTACATGT+TGG | - | chr3.2:68902819-68902838 | MS.gene25959:CDS | 40.0% | |
| GTCCTAATTTCCAGGATGAT+GGG | - | chr3.2:68901147-68901166 | MS.gene25959:CDS | 40.0% | |
| TAACAGGACAGGGAAGATAA+AGG | - | chr3.2:68902579-68902598 | MS.gene25959:CDS | 40.0% | |
| TAACTCCAATCAAGTCTCCA+AGG | - | chr3.2:68901090-68901109 | MS.gene25959:CDS | 40.0% | |
| TACTAGACCCCAAGAAAGAA+GGG | - | chr3.2:68903421-68903440 | MS.gene25959:CDS | 40.0% | |
| TCAATCGAACGCTCAAGAAT+GGG | + | chr3.2:68901986-68902005 | None:intergenic | 40.0% | |
| TCACCAAGATCAAAACCCAA+AGG | - | chr3.2:68901593-68901612 | MS.gene25959:intron | 40.0% | |
| TCAGCAGCTTCTTCAATAGA+TGG | + | chr3.2:68902289-68902308 | None:intergenic | 40.0% | |
| TCCTAATTTCCAGGATGATG+GGG | - | chr3.2:68901148-68901167 | MS.gene25959:CDS | 40.0% | |
| TGATCATTCTTTCTCTCCAG+AGG | + | chr3.2:68901641-68901660 | None:intergenic | 40.0% | |
| TGGTGAAACTTGTCGGTATT+TGG | - | chr3.2:68902174-68902193 | MS.gene25959:CDS | 40.0% | |
| TGTGAACAATTCTCCCACTA+AGG | - | chr3.2:68901061-68901080 | MS.gene25959:CDS | 40.0% | |
| TTCGACACCAAACCATATCT+TGG | + | chr3.2:68903540-68903559 | None:intergenic | 40.0% | |
| TTCTTGGGGTCTAGTATAAG+TGG | + | chr3.2:68903417-68903436 | None:intergenic | 40.0% | |
| TTTCTCCCAAAATATGCCTC+TGG | + | chr3.2:68902141-68902160 | None:intergenic | 40.0% | |
| ! | CGAAGTTCTTTTCTCCTTAC+AGG | - | chr3.2:68903556-68903575 | MS.gene25959:CDS | 40.0% |
| ! | CTGACTTGTATAACAGGACA+GGG | - | chr3.2:68902569-68902588 | MS.gene25959:CDS | 40.0% |
| ! | GGAGTTTGATTCACCTTTTG+AGG | - | chr3.2:68903447-68903466 | MS.gene25959:CDS | 40.0% |
| ! | GTCAATGAATGAGGTTGATC+AGG | - | chr3.2:68902711-68902730 | MS.gene25959:CDS | 40.0% |
| ! | TCTCTTTTCATCATCCACGT+CGG | + | chr3.2:68903672-68903691 | None:intergenic | 40.0% |
| ! | TGATTCGGAATTGCACCATT+TGG | - | chr3.2:68901280-68901299 | MS.gene25959:intron | 40.0% |
| !! | ATTGACACTGACTTTCCCAA+AGG | + | chr3.2:68901719-68901738 | None:intergenic | 40.0% |
| !! | CAAGAGTTGGTGAAACTTGT+CGG | - | chr3.2:68902167-68902186 | MS.gene25959:CDS | 40.0% |
| !! | GAAGTCCAGAGGCATATTTT+GGG | - | chr3.2:68902133-68902152 | MS.gene25959:CDS | 40.0% |
| !! | GATAACTGATTCGGCATTCA+TGG | - | chr3.2:68903279-68903298 | MS.gene25959:CDS | 40.0% |
| !! | GTTTGGCTGACTTGTATAAC+AGG | - | chr3.2:68902563-68902582 | MS.gene25959:CDS | 40.0% |
| !! | TGAAGTCCAGAGGCATATTT+TGG | - | chr3.2:68902132-68902151 | MS.gene25959:CDS | 40.0% |
| !!! | GAGTGTTTTGGAACATGAGT+TGG | - | chr3.2:68903008-68903027 | MS.gene25959:CDS | 40.0% |
| !!! | GTGTTTTGGAACATGAGTTG+GGG | - | chr3.2:68903010-68903029 | MS.gene25959:CDS | 40.0% |
| !!! | TGAGGAAGCAAAGAGTGTTT+TGG | - | chr3.2:68902996-68903015 | MS.gene25959:CDS | 40.0% |
| AATAGCAGGAATCGAAGCTC+AGG | - | chr3.2:68902795-68902814 | MS.gene25959:CDS | 45.0% | |
| ACCCCATCATCCTGGAAATT+AGG | + | chr3.2:68901152-68901171 | None:intergenic | 45.0% | |
| ACCCCGTTTGTAACAATTCC+CGG | + | chr3.2:68901011-68901030 | None:intergenic | 45.0% | |
| AGAAGAAGCGGAAACACAGA+AGG | + | chr3.2:68903120-68903139 | None:intergenic | 45.0% | |
| AGCATGGCAATGGTTGCAAA+TGG | - | chr3.2:68902382-68902401 | MS.gene25959:CDS | 45.0% | |
| AGTATGAGGGAGGAAAAGCT+CGG | - | chr3.2:68903635-68903654 | MS.gene25959:CDS | 45.0% | |
| ATCTGGTAGTAAAAGTCCGG+TGG | - | chr3.2:68901454-68901473 | MS.gene25959:intron | 45.0% | |
| ATGGTGGCTGAGATTCAATC+TGG | - | chr3.2:68901437-68901456 | MS.gene25959:intron | 45.0% | |
| ATTTGCAACCATTGCCATGC+TGG | + | chr3.2:68902383-68902402 | None:intergenic | 45.0% | |
| CAGGCTGCAATATATTGCTG+CGG | + | chr3.2:68901942-68901961 | None:intergenic | 45.0% | |
| CCGGTGATTGAGATTCAATC+TGG | - | chr3.2:68901470-68901489 | MS.gene25959:intron | 45.0% | |
| CGACAAGTTTCACCAACTCT+TGG | + | chr3.2:68902169-68902188 | None:intergenic | 45.0% | |
| CGGAATTGCACCATTTGGTT+GGG | - | chr3.2:68901285-68901304 | MS.gene25959:intron | 45.0% | |
| CTAGATCGTGTCTTAACCAC+CGG | + | chr3.2:68901506-68901525 | None:intergenic | 45.0% | |
| CTATTGTTCCTTGCTGACCA+GGG | + | chr3.2:68902780-68902799 | None:intergenic | 45.0% | |
| CTCAATCGAACGCTCAAGAA+TGG | + | chr3.2:68901987-68902006 | None:intergenic | 45.0% | |
| GAACTCCTTGGAGACTTGAT+TGG | + | chr3.2:68901098-68901117 | None:intergenic | 45.0% | |
| GAAGAAGCGGAAACACAGAA+GGG | + | chr3.2:68903119-68903138 | None:intergenic | 45.0% | |
| GAATTGCACCATTTGGTTGG+GGG | - | chr3.2:68901287-68901306 | MS.gene25959:intron | 45.0% | |
| GAGAGAATCATCCAGCAGTA+GGG | - | chr3.2:68902527-68902546 | MS.gene25959:CDS | 45.0% | |
| GCAGCAATATATTGCAGCCT+GGG | - | chr3.2:68901941-68901960 | MS.gene25959:CDS | 45.0% | |
| GGAATTGCACCATTTGGTTG+GGG | - | chr3.2:68901286-68901305 | MS.gene25959:intron | 45.0% | |
| GGAGACACCTATGCTATGTT+GGG | - | chr3.2:68902070-68902089 | MS.gene25959:CDS | 45.0% | |
| GGAGCACGTTGTTAGTATGA+GGG | - | chr3.2:68903622-68903641 | MS.gene25959:CDS | 45.0% | |
| GGTCCTAATTTCCAGGATGA+TGG | - | chr3.2:68901146-68901165 | MS.gene25959:CDS | 45.0% | |
| TAGTTCCACAAGGCCTCAAA+AGG | + | chr3.2:68903463-68903482 | None:intergenic | 45.0% | |
| TATTGTTCCTTGCTGACCAG+GGG | + | chr3.2:68902779-68902798 | None:intergenic | 45.0% | |
| TCATAAAGCTGCTCGATCGA+AGG | + | chr3.2:68901182-68901201 | None:intergenic | 45.0% | |
| TCGGAATTGCACCATTTGGT+TGG | - | chr3.2:68901284-68901303 | MS.gene25959:intron | 45.0% | |
| TCTAGTGGGGAAACATCTTC+TGG | - | chr3.2:68901380-68901399 | MS.gene25959:intron | 45.0% | |
| TGCCGGGAATTGTTACAAAC+GGG | - | chr3.2:68901006-68901025 | MS.gene25959:CDS | 45.0% | |
| TGGAGACACCTATGCTATGT+TGG | - | chr3.2:68902069-68902088 | MS.gene25959:CDS | 45.0% | |
| TGGAGCACGTTGTTAGTATG+AGG | - | chr3.2:68903621-68903640 | MS.gene25959:CDS | 45.0% | |
| TGGATGATTCTCTCCTTTGC+TGG | + | chr3.2:68902521-68902540 | None:intergenic | 45.0% | |
| TGGGGTCTAGTATAAGTGGT+TGG | + | chr3.2:68903413-68903432 | None:intergenic | 45.0% | |
| TGTGCAGCGTTATGCCTTAA+GGG | - | chr3.2:68902957-68902976 | MS.gene25959:CDS | 45.0% | |
| TGTGGACTCATTGAACTCCT+TGG | + | chr3.2:68901110-68901129 | None:intergenic | 45.0% | |
| TTGAAGAAGCTGCTGATAGG+AGG | - | chr3.2:68902293-68902312 | MS.gene25959:CDS | 45.0% | |
| ! | CAAGTTACTGCAGAAGGCAT+TGG | - | chr3.2:68902738-68902757 | MS.gene25959:CDS | 45.0% |
| ! | CTCTTTTCATCATCCACGTC+GGG | + | chr3.2:68903671-68903690 | None:intergenic | 45.0% |
| ! | TGGGGAAACATCTTCTGGAA+TGG | - | chr3.2:68901385-68901404 | MS.gene25959:intron | 45.0% |
| ! | TTGCCATGCTGGCTAAAACA+AGG | + | chr3.2:68902372-68902391 | None:intergenic | 45.0% |
| !! | AAGCGTTGGTCCTAATTTCC+AGG | - | chr3.2:68901139-68901158 | MS.gene25959:CDS | 45.0% |
| !! | ACCAAGGTATTGTGTGAAGC+AGG | - | chr3.2:68903186-68903205 | MS.gene25959:CDS | 45.0% |
| !! | AGCAGGAGGACTTTTTCCTT+TGG | + | chr3.2:68901612-68901631 | None:intergenic | 45.0% |
| !! | GCAGGAGGACTTTTTCCTTT+GGG | + | chr3.2:68901611-68901630 | None:intergenic | 45.0% |
| !! | GCAGTTTTCAAGACCAGCAA+AGG | - | chr3.2:68902505-68902524 | MS.gene25959:CDS | 45.0% |
| !! | GCTGACTTGTATAACAGGAC+AGG | - | chr3.2:68902568-68902587 | MS.gene25959:CDS | 45.0% |
| !! | GGGGAAACATCTTCTGGAAT+GGG | - | chr3.2:68901386-68901405 | MS.gene25959:intron | 45.0% |
| !! | TGTTGACTTTCCCCGATATC+AGG | + | chr3.2:68902013-68902032 | None:intergenic | 45.0% |
| !!! | ACACCTTGTTTTAGCCAGCA+TGG | - | chr3.2:68902366-68902385 | MS.gene25959:CDS | 45.0% |
| !!! | ATTCACCTTTTGAGGCCTTG+TGG | - | chr3.2:68903455-68903474 | MS.gene25959:CDS | 45.0% |
| !!! | TGTTTTAGCCAGCATGGCAA+TGG | - | chr3.2:68902372-68902391 | MS.gene25959:CDS | 45.0% |
| AAATGGCCAAGAAGCGGAAG+TGG | - | chr3.2:68902399-68902418 | MS.gene25959:CDS | 50.0% | |
| AACTCCCCACCCTTCTTTCT+TGG | + | chr3.2:68903433-68903452 | None:intergenic | 50.0% | |
| AAGCTGGCCCAACATAGCAT+AGG | + | chr3.2:68902080-68902099 | None:intergenic | 50.0% | |
| AATGCCTGGAGTTACTCCAG+AGG | - | chr3.2:68902648-68902667 | MS.gene25959:CDS | 50.0% | |
| ACTCCAGAGGAGATTGCTAG+CGG | - | chr3.2:68902661-68902680 | MS.gene25959:CDS | 50.0% | |
| ACTCCCCACCCTTCTTTCTT+GGG | + | chr3.2:68903432-68903451 | None:intergenic | 50.0% | |
| AGACCCCAAGAAAGAAGGGT+GGG | - | chr3.2:68903425-68903444 | MS.gene25959:CDS | 50.0% | |
| AGCAGAGGAGCTCTGTCAAA+TGG | - | chr3.2:68902231-68902250 | MS.gene25959:CDS | 50.0% | |
| AGCCTCGTCATATCGAGACA+GGG | + | chr3.2:68902461-68902480 | None:intergenic | 50.0% | |
| AGGGTCGGTCTTTGTACGTT+TGG | - | chr3.2:68902546-68902565 | MS.gene25959:CDS | 50.0% | |
| ATCCCTGTCTCGATATGACG+AGG | - | chr3.2:68902456-68902475 | MS.gene25959:CDS | 50.0% | |
| ATGAGTGGCATGACTCGATC+AGG | + | chr3.2:68903252-68903271 | None:intergenic | 50.0% | |
| CCAAGCGTTTCAGGGTGATA+AGG | + | chr3.2:68903036-68903055 | None:intergenic | 50.0% | |
| CCTTATCACCCTGAAACGCT+TGG | - | chr3.2:68903033-68903052 | MS.gene25959:CDS | 50.0% | |
| CGCAGCAATATATTGCAGCC+TGG | - | chr3.2:68901940-68901959 | MS.gene25959:CDS | 50.0% | |
| GAATCATCCAGCAGTAGGGT+CGG | - | chr3.2:68902531-68902550 | MS.gene25959:CDS | 50.0% | |
| GAGCCCAACCTTGAATTCAG+TGG | + | chr3.2:68901566-68901585 | None:intergenic | 50.0% | |
| GATGAGGGAGCTGGAGATAA+TGG | - | chr3.2:68901313-68901332 | MS.gene25959:intron | 50.0% | |
| GCACGTTGTTAGTATGAGGG+AGG | - | chr3.2:68903625-68903644 | MS.gene25959:CDS | 50.0% | |
| GCCGGGAATTGTTACAAACG+GGG | - | chr3.2:68901007-68901026 | MS.gene25959:CDS | 50.0% | |
| GCCTGCTTCACACAATACCT+TGG | + | chr3.2:68903190-68903209 | None:intergenic | 50.0% | |
| GCTATTGTTCCTTGCTGACC+AGG | + | chr3.2:68902781-68902800 | None:intergenic | 50.0% | |
| GGAGAAACAGACCCAAGAGT+TGG | - | chr3.2:68902154-68902173 | MS.gene25959:CDS | 50.0% | |
| GGAGAGAATCATCCAGCAGT+AGG | - | chr3.2:68902526-68902545 | MS.gene25959:CDS | 50.0% | |
| GGCACTCAAGTTACTGCAGA+AGG | - | chr3.2:68902732-68902751 | MS.gene25959:CDS | 50.0% | |
| GGTCAGCAAGGAACAATAGC+AGG | - | chr3.2:68902781-68902800 | MS.gene25959:CDS | 50.0% | |
| GGTTGCAAATGGCCAAGAAG+CGG | - | chr3.2:68902393-68902412 | MS.gene25959:CDS | 50.0% | |
| GTATGAGGGAGGAAAAGCTC+GGG | - | chr3.2:68903636-68903655 | MS.gene25959:CDS | 50.0% | |
| GTCTCCAAGTTGCATGTGAC+CGG | + | chr3.2:68902056-68902075 | None:intergenic | 50.0% | |
| GTGTGCAGCGTTATGCCTTA+AGG | - | chr3.2:68902956-68902975 | MS.gene25959:CDS | 50.0% | |
| TAAGGCATAACGCTGCACAC+AGG | + | chr3.2:68902956-68902975 | None:intergenic | 50.0% | |
| TAGACCCCAAGAAAGAAGGG+TGG | - | chr3.2:68903424-68903443 | MS.gene25959:CDS | 50.0% | |
| TCCGCACAAAGCTCTTGAGT+TGG | - | chr3.2:68901838-68901857 | MS.gene25959:CDS | 50.0% | |
| TTGCCTCACTATATCGACCC+AGG | + | chr3.2:68901961-68901980 | None:intergenic | 50.0% | |
| TTTGCCGGTCACATGCAACT+TGG | - | chr3.2:68902049-68902068 | MS.gene25959:CDS | 50.0% | |
| ! | AGTAATATCGGTGCTCGCTC+TGG | + | chr3.2:68901782-68901801 | None:intergenic | 50.0% |
| ! | GCATCTGTTGACTGCAGCAT+TGG | - | chr3.2:68902421-68902440 | MS.gene25959:CDS | 50.0% |
| ! | GCCAACTCAAGAGCTTTGTG+CGG | + | chr3.2:68901842-68901861 | None:intergenic | 50.0% |
| ! | TCGCCCTCGAGACAAAGTTT+TGG | - | chr3.2:68901233-68901252 | MS.gene25959:intron | 50.0% |
| ! | TCTGGAGTAACTCCAGGCAT+TGG | + | chr3.2:68902649-68902668 | None:intergenic | 50.0% |
| ! | TGGGAAGCCGAGTTTGGAAT+TGG | - | chr3.2:68901898-68901917 | MS.gene25959:CDS | 50.0% |
| !! | ATCTCCTCTGGAGTAACTCC+AGG | + | chr3.2:68902655-68902674 | None:intergenic | 50.0% |
| !! | GATAATGGAAGAGGAGGTGG+AGG | - | chr3.2:68901328-68901347 | MS.gene25959:intron | 50.0% |
| !! | GCTGGAGATAATGGAAGAGG+AGG | - | chr3.2:68901322-68901341 | MS.gene25959:intron | 50.0% |
| !! | GGAGATAATGGAAGAGGAGG+TGG | - | chr3.2:68901325-68901344 | MS.gene25959:intron | 50.0% |
| !! | GGAGCTGGAGATAATGGAAG+AGG | - | chr3.2:68901319-68901338 | MS.gene25959:intron | 50.0% |
| !! | TGGTAATGGGAAGCCGAGTT+TGG | - | chr3.2:68901892-68901911 | MS.gene25959:CDS | 50.0% |
| !!! | CTGCTGGTTTTGAAGTCCAG+AGG | - | chr3.2:68902122-68902141 | MS.gene25959:CDS | 50.0% |
| AAACGGGGTTCATGGCGATG+GGG | - | chr3.2:68901022-68901041 | MS.gene25959:CDS | 55.0% | |
| AATGATGCCCCTGGTCAGCA+AGG | - | chr3.2:68902769-68902788 | MS.gene25959:CDS | 55.0% | |
| AATGGAAGAGGAGGTGGAGG+TGG | - | chr3.2:68901331-68901350 | MS.gene25959:intron | 55.0% | |
| ACAAACGGGGTTCATGGCGA+TGG | - | chr3.2:68901020-68901039 | MS.gene25959:CDS | 55.0% | |
| ACAAAGACCGACCCTACTGC+TGG | + | chr3.2:68902541-68902560 | None:intergenic | 55.0% | |
| AGACCGCTAGCAATCTCCTC+TGG | + | chr3.2:68902667-68902686 | None:intergenic | 55.0% | |
| AGCAGGAATCGAAGCTCAGG+TGG | - | chr3.2:68902798-68902817 | MS.gene25959:CDS | 55.0% | |
| AGCTGCTGATAGGAGGCTCA+TGG | - | chr3.2:68902300-68902319 | MS.gene25959:CDS | 55.0% | |
| AGGAATCGAAGCTCAGGTGG+GGG | - | chr3.2:68902801-68902820 | MS.gene25959:CDS | 55.0% | |
| ATTTGGTTGGGGGACGGATG+AGG | - | chr3.2:68901297-68901316 | MS.gene25959:intron | 55.0% | |
| CAAACGGGGTTCATGGCGAT+GGG | - | chr3.2:68901021-68901040 | MS.gene25959:CDS | 55.0% | |
| CAGCCTCGTCATATCGAGAC+AGG | + | chr3.2:68902462-68902481 | None:intergenic | 55.0% | |
| CAGCCTGGGTCGATATAGTG+AGG | - | chr3.2:68901955-68901974 | MS.gene25959:CDS | 55.0% | |
| CAGGAATCGAAGCTCAGGTG+GGG | - | chr3.2:68902800-68902819 | MS.gene25959:CDS | 55.0% | |
| CCAACGCTTTGACGTCTCTG+TGG | + | chr3.2:68901128-68901147 | None:intergenic | 55.0% | |
| CCACAGAGACGTCAAAGCGT+TGG | - | chr3.2:68901125-68901144 | MS.gene25959:CDS | 55.0% | |
| CTCCCCACCCTTCTTTCTTG+GGG | + | chr3.2:68903431-68903450 | None:intergenic | 55.0% | |
| GACCCCAAGAAAGAAGGGTG+GGG | - | chr3.2:68903426-68903445 | MS.gene25959:CDS | 55.0% | |
| GCACGTACGACGCAATTGGA+AGG | - | chr3.2:68903076-68903095 | MS.gene25959:CDS | 55.0% | |
| GCAGGAATCGAAGCTCAGGT+GGG | - | chr3.2:68902799-68902818 | MS.gene25959:CDS | 55.0% | |
| GCTCAACAACCCCATCATCC+TGG | + | chr3.2:68901160-68901179 | None:intergenic | 55.0% | |
| GCTGCTGATAGGAGGCTCAT+GGG | - | chr3.2:68902301-68902320 | MS.gene25959:CDS | 55.0% | |
| TCATCCGTCCCCCAACCAAA+TGG | + | chr3.2:68901298-68901317 | None:intergenic | 55.0% | |
| TCCCCACTAGAACTCTCTCC+TGG | + | chr3.2:68901371-68901390 | None:intergenic | 55.0% | |
| TCCTCCTGCTAAAGCTCCTC+TGG | - | chr3.2:68901622-68901641 | MS.gene25959:intron | 55.0% | |
| TGCACCATTTGGTTGGGGGA+CGG | - | chr3.2:68901291-68901310 | MS.gene25959:intron | 55.0% | |
| TTTGGTTGGGGGACGGATGA+GGG | - | chr3.2:68901298-68901317 | MS.gene25959:intron | 55.0% | |
| ! | AGGCCAGGAGAGAGTTCTAG+TGG | - | chr3.2:68901365-68901384 | MS.gene25959:intron | 55.0% |
| ! | CAGATGCCACTTCCGCTTCT+TGG | + | chr3.2:68902408-68902427 | None:intergenic | 55.0% |
| ! | CTCTCCAGAGGAGCTTTAGC+AGG | + | chr3.2:68901629-68901648 | None:intergenic | 55.0% |
| ! | GCCAGGAGAGAGTTCTAGTG+GGG | - | chr3.2:68901367-68901386 | MS.gene25959:intron | 55.0% |
| ! | GGCCAGGAGAGAGTTCTAGT+GGG | - | chr3.2:68901366-68901385 | MS.gene25959:intron | 55.0% |
| ! | TCCAGAGGAGCTTTAGCAGG+AGG | + | chr3.2:68901626-68901645 | None:intergenic | 55.0% |
| AAGAGGAGGTGGAGGTGGAG+GGG | - | chr3.2:68901336-68901355 | MS.gene25959:intron | 60.0% | |
| GAAGAGGAGGTGGAGGTGGA+GGG | - | chr3.2:68901335-68901354 | MS.gene25959:intron | 60.0% | |
| GCAGGCACGTACGACGCAAT+TGG | - | chr3.2:68903072-68903091 | MS.gene25959:CDS | 60.0% | |
| ! | TGCGAGCGTCGCCGTCAAAA+AGG | + | chr3.2:68903760-68903779 | None:intergenic | 60.0% |
| AGAGGAGGTGGAGGTGGAGG+GGG | - | chr3.2:68901337-68901356 | MS.gene25959:intron | 65.0% | |
| GGAAGAGGAGGTGGAGGTGG+AGG | - | chr3.2:68901334-68901353 | MS.gene25959:intron | 65.0% | |
| TGGAGGTGGAGGGGGGAAGA+AGG | - | chr3.2:68901345-68901364 | MS.gene25959:intron | 65.0% | |
| CGGGACAGCGAATCCCGACG+TGG | - | chr3.2:68903655-68903674 | MS.gene25959:CDS | 70.0% | |
| GAGGAGGTGGAGGTGGAGGG+GGG | - | chr3.2:68901338-68901357 | MS.gene25959:intron | 70.0% | |
| GTGGAGGGGGGAAGAAGGCC+AGG | - | chr3.2:68901350-68901369 | MS.gene25959:intron | 70.0% | |
| TGGGGGACGGATGAGGGAGC+TGG | - | chr3.2:68901304-68901323 | MS.gene25959:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 68901005 | 68903808 | 68901005 | ID=MS.gene25959 |
| chr3.2 | mRNA | 68901005 | 68903808 | 68901005 | ID=MS.gene25959.t1;Parent=MS.gene25959 |
| chr3.2 | exon | 68901716 | 68903808 | 68901716 | ID=MS.gene25959.t1.exon1;Parent=MS.gene25959.t1 |
| chr3.2 | CDS | 68901716 | 68903808 | 68901716 | ID=cds.MS.gene25959.t1;Parent=MS.gene25959.t1 |
| chr3.2 | exon | 68901005 | 68901215 | 68901005 | ID=MS.gene25959.t1.exon2;Parent=MS.gene25959.t1 |
| chr3.2 | CDS | 68901005 | 68901215 | 68901005 | ID=cds.MS.gene25959.t1;Parent=MS.gene25959.t1 |
| Gene Sequence |
| Protein sequence |
