Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26078.t1 | RHN51920.1 | 69.8 | 321 | 56 | 1 | 42 | 362 | 1 | 280 | 6.30E-117 | 431.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26078.t1 | Q94F30 | 26.6 | 241 | 150 | 11 | 458 | 693 | 271 | 489 | 8.0e-12 | 73.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26078.t1 | A0A396HF22 | 69.8 | 321 | 56 | 1 | 42 | 362 | 1 | 280 | 4.5e-117 | 431.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054359 | MS.gene26078 | 0.835185 | 1.94E-56 | -1.69E-46 |
| MS.gene058870 | MS.gene26078 | 0.87898 | 1.81E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26078.t1 | MTR_8g009990 | 63.500 | 400 | 44 | 4 | 1 | 399 | 1 | 299 | 1.23e-160 | 466 |
| MS.gene26078.t1 | MTR_0008s0230 | 81.622 | 185 | 27 | 2 | 495 | 679 | 17 | 194 | 7.07e-100 | 310 |
| MS.gene26078.t1 | MTR_0008s0230 | 93.750 | 32 | 2 | 0 | 653 | 684 | 276 | 307 | 1.03e-13 | 73.2 |
| MS.gene26078.t1 | MTR_0186s0120 | 88.525 | 122 | 14 | 0 | 20 | 141 | 1 | 122 | 1.51e-69 | 223 |
| MS.gene26078.t1 | MTR_4g131870 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 3.45e-53 | 178 |
| MS.gene26078.t1 | MTR_1g054565 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 3.45e-53 | 178 |
| MS.gene26078.t1 | MTR_1g050130 | 93.407 | 91 | 6 | 0 | 1 | 91 | 1 | 91 | 1.29e-52 | 177 |
| MS.gene26078.t1 | MTR_3g014770 | 93.407 | 91 | 6 | 0 | 1 | 91 | 1 | 91 | 2.19e-52 | 176 |
| MS.gene26078.t1 | MTR_3g014760 | 32.812 | 192 | 117 | 3 | 22 | 213 | 9 | 188 | 8.08e-29 | 117 |
| MS.gene26078.t1 | MTR_7g102530 | 33.854 | 192 | 121 | 3 | 22 | 213 | 9 | 194 | 1.06e-28 | 117 |
| MS.gene26078.t1 | MTR_4g131860 | 33.854 | 192 | 121 | 3 | 22 | 213 | 9 | 194 | 1.13e-28 | 117 |
| MS.gene26078.t1 | MTR_1g050140 | 33.854 | 192 | 121 | 3 | 22 | 213 | 9 | 194 | 1.83e-28 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26078.t1 | AT4G00690 | 24.664 | 223 | 140 | 8 | 477 | 693 | 141 | 341 | 3.80e-12 | 68.9 |
| MS.gene26078.t1 | AT4G15880 | 26.690 | 281 | 163 | 14 | 419 | 693 | 246 | 489 | 1.06e-11 | 68.2 |
Find 175 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTCTTAGTACCTATAAT+TGG | 0.159588 | 5.4:+56194181 | MS.gene26078:CDS |
| GATACAGTTATACACATTTC+TGG | 0.200591 | 5.4:+56194276 | MS.gene26078:CDS |
| CTAGACCTTTGTTTGGCTTT+AGG | 0.220943 | 5.4:+56193913 | MS.gene26078:CDS |
| ATGCGTGGAAAACGCTTAAT+TGG | 0.267383 | 5.4:-56194445 | None:intergenic |
| TGAGGTAGTTGATGATTTAA+AGG | 0.268632 | 5.4:+56195701 | MS.gene26078:CDS |
| AGATATGTTGGAATCTTCTT+TGG | 0.268674 | 5.4:+56196670 | MS.gene26078:CDS |
| TGAGGGAAAACAAACGAAAA+AGG | 0.283246 | 5.4:+56193560 | MS.gene26078:CDS |
| ACAAAGGTCTAGATGTTTAA+AGG | 0.286497 | 5.4:-56193902 | None:intergenic |
| TTAATATAACTGTGTGATTT+CGG | 0.290724 | 5.4:-56194126 | None:intergenic |
| GAGGATATTAAAAGCAAATA+AGG | 0.296971 | 5.4:+56194827 | MS.gene26078:CDS |
| TGTGGGATGGTGAAGCAAAA+TGG | 0.309075 | 5.4:+56196860 | MS.gene26078:CDS |
| CGCTCTTAGTACCTATAATT+GGG | 0.312086 | 5.4:+56194182 | MS.gene26078:CDS |
| ATTTACCAAAGCAACAAAAT+TGG | 0.312599 | 5.4:+56196708 | MS.gene26078:CDS |
| GCTTTAGGTTTGCCTATTGT+AGG | 0.336005 | 5.4:+56193928 | MS.gene26078:CDS |
| GCTTAATTGGACCACTGGTT+AGG | 0.336914 | 5.4:-56194432 | None:intergenic |
| CATTGGAGTTTACGTCCTTC+AGG | 0.346042 | 5.4:-56195729 | None:intergenic |
| CCTTAGGTTATTAATATTGC+TGG | 0.350091 | 5.4:+56195514 | MS.gene26078:intron |
| AACACAAAGATTTGCTTTCC+CGG | 0.362338 | 5.4:+56194781 | MS.gene26078:CDS |
| AACAGCAACACCCCAATTAT+AGG | 0.367016 | 5.4:-56194193 | None:intergenic |
| ATGTCCAGTGGTCTTCGAAC+TGG | 0.369613 | 5.4:-56196408 | None:intergenic |
| AACCATTCTCAAGTTGGTAT+TGG | 0.370824 | 5.4:+56194693 | MS.gene26078:CDS |
| AATAAAGGAGCGAACAATAA+AGG | 0.374187 | 5.4:+56196647 | MS.gene26078:CDS |
| GTAGATGAGTTGCGTGTTGC+CGG | 0.380253 | 5.4:+56195358 | MS.gene26078:CDS |
| TGGTTGCCCAGCCGTATTGC+AGG | 0.381669 | 5.4:+56194296 | MS.gene26078:CDS |
| GTTTACCGGAAACTAGTGAT+AGG | 0.386283 | 5.4:+56193956 | MS.gene26078:CDS |
| CTACGTTGTCCCCTTCTTGA+AGG | 0.389579 | 5.4:-56194053 | None:intergenic |
| TGCAGTATCTAATACAAATC+TGG | 0.391438 | 5.4:-56198490 | None:intergenic |
| CTTCCTACTTCCATGCTACT+TGG | 0.397148 | 5.4:-56194876 | None:intergenic |
| TGATTAGTTGGTTGAGGACT+TGG | 0.400972 | 5.4:+56194623 | MS.gene26078:intron |
| GTGGGATGGTGAAGCAAAAT+GGG | 0.404332 | 5.4:+56196861 | MS.gene26078:CDS |
| GTGGATATGAAGACCTATAT+AGG | 0.406234 | 5.4:+56193796 | MS.gene26078:CDS |
| AAATGCCTCAAGGCAGCGTT+TGG | 0.407622 | 5.4:+56196492 | MS.gene26078:CDS |
| GTAGTGGAATTGATGAATAA+AGG | 0.409455 | 5.4:+56196632 | MS.gene26078:CDS |
| CTAACCCTATCACTAGTTTC+CGG | 0.415358 | 5.4:-56193961 | None:intergenic |
| CAGTGAAATTGTTTGTCGTC+TGG | 0.416799 | 5.4:+56198443 | MS.gene26078:CDS |
| AGTACCATTCATTCCTATAT+AGG | 0.420459 | 5.4:-56193809 | None:intergenic |
| TAAACATCTAGACCTTTGTT+TGG | 0.421249 | 5.4:+56193906 | MS.gene26078:CDS |
| ACTTCCTCGCCTTCATGCAT+TGG | 0.432506 | 5.4:-56195390 | None:intergenic |
| GGAGTTGGATGATGATGATA+TGG | 0.432653 | 5.4:+56195127 | MS.gene26078:CDS |
| TGATGATGATATGGCTGAAA+AGG | 0.433309 | 5.4:+56195136 | MS.gene26078:CDS |
| TTTATTCTGCACACATGAAA+AGG | 0.433361 | 5.4:+56195205 | MS.gene26078:CDS |
| CTTAATTGGACCACTGGTTA+GGG | 0.433873 | 5.4:-56194431 | None:intergenic |
| AATGAATGGTACTTTATTGA+AGG | 0.438781 | 5.4:+56193819 | MS.gene26078:CDS |
| GGTATATGTTCTTAAGTACT+TGG | 0.444660 | 5.4:+56196834 | MS.gene26078:CDS |
| TATGTTGGAATCTTCTTTGG+AGG | 0.445095 | 5.4:+56196673 | MS.gene26078:CDS |
| TTCAATACCTGCAATACGGC+TGG | 0.445664 | 5.4:-56194303 | None:intergenic |
| TCTTCATATCCACAAGATAT+CGG | 0.446334 | 5.4:-56193786 | None:intergenic |
| AGCAAATAAGGTTGACGGTA+GGG | 0.449525 | 5.4:+56194839 | MS.gene26078:CDS |
| TTGGAAGAAGAAAATGATGA+TGG | 0.450909 | 5.4:+56195035 | MS.gene26078:CDS |
| TTCTTTGGAGGTTGTAGTGG+TGG | 0.452564 | 5.4:+56196685 | MS.gene26078:CDS |
| TTTGCGCATCAGACAATGTT+CGG | 0.454164 | 5.4:-56193738 | None:intergenic |
| GGTAAACACTCTCCTACAAT+AGG | 0.455224 | 5.4:-56193940 | None:intergenic |
| TGAATTTCCGCTCAGTCCAT+TGG | 0.455335 | 5.4:-56195746 | None:intergenic |
| TTCTTAAGTACTTGGAGTTG+TGG | 0.459941 | 5.4:+56196842 | MS.gene26078:CDS |
| AAGATTGATGCGGATAATGA+TGG | 0.460099 | 5.4:+56194930 | MS.gene26078:CDS |
| TAGATGAGTTGCGTGTTGCC+GGG | 0.464352 | 5.4:+56195359 | MS.gene26078:CDS |
| TTAATGTGATTAGTTGGTTG+AGG | 0.466558 | 5.4:+56194617 | MS.gene26078:intron |
| TATCTACCAACTTATTAGTA+CGG | 0.467587 | 5.4:-56193711 | None:intergenic |
| ATCTACCAACTTATTAGTAC+GGG | 0.467987 | 5.4:-56193710 | None:intergenic |
| AGGTGGGATGCAAGTAGCTT+GGG | 0.470670 | 5.4:+56193853 | MS.gene26078:CDS |
| TGGGATTTAGAGTAGGCGTT+AGG | 0.472541 | 5.4:+56193872 | MS.gene26078:CDS |
| GGAAAGCAAATCTTTGTGTT+CGG | 0.477390 | 5.4:-56194778 | None:intergenic |
| TCTTAAGTACTTGGAGTTGT+GGG | 0.482984 | 5.4:+56196843 | MS.gene26078:CDS |
| CATGTTACGTGTTGGACCAT+AGG | 0.488808 | 5.4:+56196428 | MS.gene26078:CDS |
| AATATTCAATACCTGCAATA+CGG | 0.491166 | 5.4:-56194307 | None:intergenic |
| TATTGTAGGAGAGTGTTTAC+CGG | 0.495009 | 5.4:+56193942 | MS.gene26078:CDS |
| AGAAAATGATGGGATGAAGT+TGG | 0.497063 | 5.4:+56194980 | MS.gene26078:CDS |
| TGAAGGAATTATTGCATAGG+TGG | 0.500937 | 5.4:+56193836 | MS.gene26078:CDS |
| ACCAACTTGAGAATGGTTAA+CGG | 0.500987 | 5.4:-56194688 | None:intergenic |
| AACATGACCTCCATCCACTT+TGG | 0.501951 | 5.4:-56194479 | None:intergenic |
| AAGCTGAAGGTCCTTCAAGA+AGG | 0.502318 | 5.4:+56194042 | MS.gene26078:CDS |
| ATCCTCAAGGATTGAAACCC+GGG | 0.502408 | 5.4:-56194799 | None:intergenic |
| TAAAGACAATGGGATGGAGT+TGG | 0.505100 | 5.4:+56195112 | MS.gene26078:CDS |
| CTCCAATACCAACTTGAGAA+TGG | 0.505693 | 5.4:-56194695 | None:intergenic |
| CATACATTGTCCTCTTCCTA+TGG | 0.507544 | 5.4:-56196444 | None:intergenic |
| AGCATTACCAATGAATAGTC+GGG | 0.509033 | 5.4:-56196898 | None:intergenic |
| ATGGAAGAAGATAAAGACAA+TGG | 0.509362 | 5.4:+56195101 | MS.gene26078:CDS |
| TAGGTGGGATGCAAGTAGCT+TGG | 0.510938 | 5.4:+56193852 | MS.gene26078:CDS |
| AAGCATTACCAATGAATAGT+CGG | 0.511109 | 5.4:-56196899 | None:intergenic |
| AAGACCTATATAGGAATGAA+TGG | 0.515117 | 5.4:+56193805 | MS.gene26078:CDS |
| ATCTTCTTTGGAGGTTGTAG+TGG | 0.519883 | 5.4:+56196682 | MS.gene26078:CDS |
| TGGAAGAAGATAAAGACAAT+GGG | 0.520727 | 5.4:+56195102 | MS.gene26078:CDS |
| GCCGTTAACCATTCTCAAGT+TGG | 0.520859 | 5.4:+56194687 | MS.gene26078:CDS |
| GAAGAGGACAATGTATGTGC+TGG | 0.521423 | 5.4:+56196450 | MS.gene26078:CDS |
| AGGTTATTAATATTGCTGGC+AGG | 0.523648 | 5.4:+56195518 | MS.gene26078:intron |
| ACTTACAGGAGGATATCCTT+CGG | 0.524242 | 5.4:+56198415 | MS.gene26078:intron |
| TTAAAAGCAAATAAGGTTGA+CGG | 0.525394 | 5.4:+56194834 | MS.gene26078:CDS |
| AACTCCGTTCCGATATCTTG+TGG | 0.528157 | 5.4:+56193777 | MS.gene26078:CDS |
| GGAAAAGCAGAAGAAAATGA+TGG | 0.528960 | 5.4:+56194969 | MS.gene26078:CDS |
| TGTCTAGAATGTTGATGAGT+GGG | 0.529221 | 5.4:+56195897 | MS.gene26078:intron |
| AATGCCCCGTACTAATAAGT+TGG | 0.529713 | 5.4:+56193705 | MS.gene26078:CDS |
| GATGGGTTGAAAAGTGAGGC+GGG | 0.530008 | 5.4:+56194948 | MS.gene26078:CDS |
| CCGCAACGCCTCAAGTGTCT+TGG | 0.532629 | 5.4:-56195790 | None:intergenic |
| AATGCATGAAGGCGAGGAAG+TGG | 0.532769 | 5.4:+56195392 | MS.gene26078:CDS |
| ATACCCGCGGATTTATTGAT+CGG | 0.534688 | 5.4:+56198516 | MS.gene26078:CDS |
| AAAACGCTTAATTGGACCAC+TGG | 0.534869 | 5.4:-56194437 | None:intergenic |
| GAGTATGCCCGACTATTCAT+TGG | 0.535075 | 5.4:+56196891 | MS.gene26078:CDS |
| AGCTGAAGGTCCTTCAAGAA+GGG | 0.538805 | 5.4:+56194043 | MS.gene26078:CDS |
| ACACAAAGATTTGCTTTCCC+GGG | 0.543023 | 5.4:+56194782 | MS.gene26078:CDS |
| GAACAATAAAGGAGATATGT+TGG | 0.549679 | 5.4:+56196658 | MS.gene26078:CDS |
| CAATCCTTGAGGATGATATG+AGG | 0.550170 | 5.4:+56194808 | MS.gene26078:CDS |
| CTTATATGGCTGAACATCAA+AGG | 0.550916 | 5.4:+56194748 | MS.gene26078:CDS |
| TGTCCAGTGGTCTTCGAACT+GGG | 0.551007 | 5.4:-56196407 | None:intergenic |
| GGCATTTGAGTCTTTATCTG+TGG | 0.552622 | 5.4:-56193688 | None:intergenic |
| AGTAGCATGGAAGTAGGAAG+TGG | 0.553313 | 5.4:+56194879 | MS.gene26078:CDS |
| TTTACCGGAAACTAGTGATA+GGG | 0.559975 | 5.4:+56193957 | MS.gene26078:CDS |
| GAAGGAATTATTGCATAGGT+GGG | 0.560436 | 5.4:+56193837 | MS.gene26078:CDS |
| TATTCCGATGCCAAGTAGCA+TGG | 0.561626 | 5.4:+56194866 | MS.gene26078:CDS |
| TTCCCGGGTTTCAATCCTTG+AGG | 0.561883 | 5.4:+56194797 | MS.gene26078:CDS |
| CATCCTCAAGGATTGAAACC+CGG | 0.563868 | 5.4:-56194800 | None:intergenic |
| TCAAGATGTATATGCCTCGT+TGG | 0.564996 | 5.4:+56195766 | MS.gene26078:CDS |
| AAGCAAATAAGGTTGACGGT+AGG | 0.567979 | 5.4:+56194838 | MS.gene26078:CDS |
| AGAAAATGATGATGGGATGA+AGG | 0.570797 | 5.4:+56195043 | MS.gene26078:CDS |
| ATTCCACTACCCCTTCAAAA+CGG | 0.572945 | 5.4:-56196619 | None:intergenic |
| CAACCCAGTTCGAAGACCAC+TGG | 0.574509 | 5.4:+56196404 | MS.gene26078:CDS |
| CATGATGAAGTTCGAAAACA+TGG | 0.575114 | 5.4:+56195550 | MS.gene26078:CDS |
| ATATCCTCATATCATCCTCA+AGG | 0.575345 | 5.4:-56194812 | None:intergenic |
| TATGGCTGAACATCAAAGGT+TGG | 0.580692 | 5.4:+56194752 | MS.gene26078:CDS |
| AGATGAGTTGCGTGTTGCCG+GGG | 0.584197 | 5.4:+56195360 | MS.gene26078:CDS |
| AGTAGCTTGGGATTTAGAGT+AGG | 0.584499 | 5.4:+56193865 | MS.gene26078:CDS |
| TTGGTCCAATTGTTAATGCG+TGG | 0.585880 | 5.4:-56194460 | None:intergenic |
| ACTTCCATGCTACTTGGCAT+CGG | 0.586687 | 5.4:-56194870 | None:intergenic |
| AGAAGATAAAGACAATGGGA+TGG | 0.587623 | 5.4:+56195106 | MS.gene26078:CDS |
| TATTGAAGGAATTATTGCAT+AGG | 0.587809 | 5.4:+56193833 | MS.gene26078:CDS |
| CTGAAGGACGTAAACTCCAA+TGG | 0.587862 | 5.4:+56195730 | MS.gene26078:CDS |
| AATTGAAAATCTTAGTAGTG+CGG | 0.588744 | 5.4:+56194227 | MS.gene26078:CDS |
| GAAGGTTGATGATGAAGATG+TGG | 0.591676 | 5.4:+56195061 | MS.gene26078:CDS |
| TAGTGTACATTCTAAGCTGA+AGG | 0.592478 | 5.4:+56194029 | MS.gene26078:CDS |
| AACAATTGGACCAAAGTGGA+TGG | 0.592872 | 5.4:+56194469 | MS.gene26078:CDS |
| GAAAAGCAGAAGAAAATGAT+GGG | 0.594943 | 5.4:+56194970 | MS.gene26078:CDS |
| CAGTGGTCTTCGAACTGGGT+TGG | 0.595890 | 5.4:-56196403 | None:intergenic |
| ATGCATGAAGGCGAGGAAGT+GGG | 0.596800 | 5.4:+56195393 | MS.gene26078:CDS |
| TAACCGATCAATAAATCCGC+GGG | 0.596912 | 5.4:-56198519 | None:intergenic |
| GATTTAAAGGCACATCCTGA+AGG | 0.597377 | 5.4:+56195714 | MS.gene26078:CDS |
| CATTAACAATTGGACCAAAG+TGG | 0.599981 | 5.4:+56194465 | MS.gene26078:CDS |
| TCAATACCTGCAATACGGCT+GGG | 0.600754 | 5.4:-56194302 | None:intergenic |
| TGATGAAGATGTTGGTGAAG+AGG | 0.600999 | 5.4:+56195004 | MS.gene26078:CDS |
| CCACTGGACATGTTACGTGT+TGG | 0.601741 | 5.4:+56196420 | MS.gene26078:CDS |
| ACGTGTTGGACCATAGGAAG+AGG | 0.602868 | 5.4:+56196434 | MS.gene26078:CDS |
| TAGAGTAGGCGTTAGGACTG+TGG | 0.605350 | 5.4:+56193879 | MS.gene26078:CDS |
| ATGCCAAGTAGCATGGAAGT+AGG | 0.607349 | 5.4:+56194873 | MS.gene26078:CDS |
| TTGTCTAGAATGTTGATGAG+TGG | 0.608942 | 5.4:+56195896 | MS.gene26078:intron |
| GGAAGTGGGTCAAAACATGT+AGG | 0.610645 | 5.4:+56194894 | MS.gene26078:CDS |
| TGGAAGAAGAAAATGATGAT+GGG | 0.616216 | 5.4:+56195036 | MS.gene26078:CDS |
| CCAAGACACTTGAGGCGTTG+CGG | 0.618422 | 5.4:+56195790 | MS.gene26078:CDS |
| GGTTCCAACACAACAAGACA+TGG | 0.619501 | 5.4:+56194644 | MS.gene26078:CDS |
| TGGGATGGTGAAGCAAAATG+GGG | 0.623459 | 5.4:+56196862 | MS.gene26078:CDS |
| TGATGGGTTGAAAAGTGAGG+CGG | 0.624829 | 5.4:+56194947 | MS.gene26078:CDS |
| GCAGCGTTTGGATAATGCAA+TGG | 0.628794 | 5.4:+56196504 | MS.gene26078:CDS |
| GTCATTTGATTAGATATGGG+CGG | 0.632926 | 5.4:+56194396 | MS.gene26078:intron |
| CAATTTCACTGCGAATCCGA+AGG | 0.633824 | 5.4:-56198431 | None:intergenic |
| GCTGAAGGTCCTTCAAGAAG+GGG | 0.635073 | 5.4:+56194044 | MS.gene26078:CDS |
| AAGTACTTGGAGTTGTGGGA+TGG | 0.635913 | 5.4:+56196847 | MS.gene26078:CDS |
| AAGGTTGATGATGAAGATGT+GGG | 0.641554 | 5.4:+56195062 | MS.gene26078:CDS |
| AAGTTGGATGATGAAGATGT+TGG | 0.645218 | 5.4:+56194996 | MS.gene26078:CDS |
| ATTATCCAAACGCTGCCTTG+AGG | 0.647660 | 5.4:-56196497 | None:intergenic |
| CGGAAAATATAACACACACA+AGG | 0.655010 | 5.4:-56194106 | None:intergenic |
| ACAGTGAAAGAAATGCCTCA+AGG | 0.655287 | 5.4:+56196482 | MS.gene26078:CDS |
| AGATTGATGCGGATAATGAT+GGG | 0.662184 | 5.4:+56194931 | MS.gene26078:CDS |
| TAATGATGGGTTGAAAAGTG+AGG | 0.663934 | 5.4:+56194944 | MS.gene26078:CDS |
| AATTGGACCAAAGTGGATGG+AGG | 0.668982 | 5.4:+56194472 | MS.gene26078:CDS |
| GCAAACCTAAAGCCAAACAA+AGG | 0.673782 | 5.4:-56193918 | None:intergenic |
| GTAGCATGGAAGTAGGAAGT+GGG | 0.674257 | 5.4:+56194880 | MS.gene26078:CDS |
| TCGTTGGACCAAGACACTTG+AGG | 0.677045 | 5.4:+56195782 | MS.gene26078:CDS |
| GAACATTTATCCCTAACCAG+TGG | 0.678694 | 5.4:+56194421 | MS.gene26078:CDS |
| GCTCTTAGTACCTATAATTG+GGG | 0.679670 | 5.4:+56194183 | MS.gene26078:CDS |
| TTAACCGATCAATAAATCCG+CGG | 0.698985 | 5.4:-56198520 | None:intergenic |
| ATATCCACAAGATATCGGAA+CGG | 0.702922 | 5.4:-56193781 | None:intergenic |
| CCAACACGTAACATGTCCAG+TGG | 0.705795 | 5.4:-56196420 | None:intergenic |
| GTAAACTCCAATGGACTGAG+CGG | 0.711805 | 5.4:+56195739 | MS.gene26078:CDS |
| TCAAGTGTCTTGGTCCAACG+AGG | 0.711931 | 5.4:-56195780 | None:intergenic |
| AGATACTGCAAAGATACCCG+CGG | 0.714457 | 5.4:+56198503 | MS.gene26078:CDS |
| GGGATGGTGAAGCAAAATGG+GGG | 0.720669 | 5.4:+56196863 | MS.gene26078:CDS |
| AAAGTGTAGTAAGATTGATG+CGG | 0.726301 | 5.4:+56194920 | MS.gene26078:CDS |
| TCTACCAACTTATTAGTACG+GGG | 0.745691 | 5.4:-56193709 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAATTAAAACAAAAA+AGG | - | chr5.4:56195448-56195467 | None:intergenic | 10.0% |
| !! | ACTAAATACTAATATATTAT+GGG | + | chr5.4:56198355-56198374 | MS.gene26078:intron | 10.0% |
| !! | TACTAAATACTAATATATTA+TGG | + | chr5.4:56198354-56198373 | MS.gene26078:intron | 10.0% |
| !! | TATTTAATCGTAAAATAAAT+TGG | - | chr5.4:56197158-56197177 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTAAAGTGTT+TGG | + | chr5.4:56198138-56198157 | MS.gene26078:intron | 10.0% |
| !!! | TTTTCATTTAAAAAAAATTG+AGG | - | chr5.4:56197655-56197674 | None:intergenic | 10.0% |
| !! | ACATAAATAAAAGTAAGTAA+TGG | - | chr5.4:56195490-56195509 | None:intergenic | 15.0% |
| !! | ATTAAAACAAAAAAGGTTAA+CGG | - | chr5.4:56195441-56195460 | None:intergenic | 15.0% |
| !! | CTAAATACTAATATATTATG+GGG | + | chr5.4:56198356-56198375 | MS.gene26078:intron | 15.0% |
| !!! | AACTCTTAAATAAATTGTTT+TGG | + | chr5.4:56196534-56196553 | MS.gene26078:intron | 15.0% |
| !!! | AATTTTGTCAGATTATTTTT+CGG | + | chr5.4:56195588-56195607 | MS.gene26078:CDS | 15.0% |
| !! | AATAACTCACTAGAATATAT+GGG | + | chr5.4:56197298-56197317 | MS.gene26078:intron | 20.0% |
| !! | ATTATAATTAATGTTAGGCA+TGG | - | chr5.4:56195674-56195693 | None:intergenic | 20.0% |
| !! | CTGCAATTATAATTAATGTT+AGG | - | chr5.4:56195679-56195698 | None:intergenic | 20.0% |
| !! | TATTTGACAGGAATAAAAAT+GGG | - | chr5.4:56197484-56197503 | None:intergenic | 20.0% |
| !! | TCATTGACATCAAATTTATT+AGG | - | chr5.4:56196302-56196321 | None:intergenic | 20.0% |
| !! | TCGTTTGAAAATAAAATCAT+GGG | + | chr5.4:56198264-56198283 | MS.gene26078:intron | 20.0% |
| !! | TGATATATTACTTGTGTATA+GGG | + | chr5.4:56196763-56196782 | MS.gene26078:intron | 20.0% |
| !! | TTAATATAACTGTGTGATTT+CGG | - | chr5.4:56194129-56194148 | None:intergenic | 20.0% |
| !! | TTAATTATAATTGCAGTTTG+AGG | + | chr5.4:56195683-56195702 | MS.gene26078:intron | 20.0% |
| !! | TTATAATTAATGTTAGGCAT+GGG | - | chr5.4:56195673-56195692 | None:intergenic | 20.0% |
| !! | TTCAACAATCAATTTCATAT+AGG | - | chr5.4:56197580-56197599 | None:intergenic | 20.0% |
| !! | TTGATATATTACTTGTGTAT+AGG | + | chr5.4:56196762-56196781 | MS.gene26078:intron | 20.0% |
| !! | TTGTTTGAGGAAAATAAAAA+TGG | + | chr5.4:56197326-56197345 | MS.gene26078:intron | 20.0% |
| !!! | ATGATTTTATTTTCAAACGA+GGG | - | chr5.4:56198264-56198283 | None:intergenic | 20.0% |
| !!! | ATTTGTCATTTGATTAGATA+TGG | + | chr5.4:56194392-56194411 | MS.gene26078:intron | 20.0% |
| !!! | CAAGAATTATTTTCTTTTGT+CGG | + | chr5.4:56197695-56197714 | MS.gene26078:intron | 20.0% |
| !!! | TTTGTCATTTGATTAGATAT+GGG | + | chr5.4:56194393-56194412 | MS.gene26078:intron | 20.0% |
| !!! | TTTTATTTATGTATTGCCTT+AGG | + | chr5.4:56195498-56195517 | MS.gene26078:intron | 20.0% |
| ! | AAAACAAAACTCGCAAAATT+AGG | - | chr5.4:56196261-56196280 | None:intergenic | 25.0% |
| ! | AAACAAAACTCGCAAAATTA+GGG | - | chr5.4:56196260-56196279 | None:intergenic | 25.0% |
| ! | AACAATCAATTTCATATAGG+AGG | - | chr5.4:56197577-56197596 | None:intergenic | 25.0% |
| ! | AATATTCAATACCTGCAATA+CGG | - | chr5.4:56194310-56194329 | None:intergenic | 25.0% |
| ! | AATGAATGGTACTTTATTGA+AGG | + | chr5.4:56193819-56193838 | MS.gene26078:CDS | 25.0% |
| ! | AATTAGAATTGTTAAGACTC+AGG | + | chr5.4:56197109-56197128 | MS.gene26078:intron | 25.0% |
| ! | AATTGAAAATCTTAGTAGTG+CGG | + | chr5.4:56194227-56194246 | MS.gene26078:CDS | 25.0% |
| ! | ACCAACTAATCACATTAAAT+AGG | - | chr5.4:56194615-56194634 | None:intergenic | 25.0% |
| ! | ACCTATTTAATGTGATTAGT+TGG | + | chr5.4:56194611-56194630 | MS.gene26078:intron | 25.0% |
| ! | AGTATATTAACTCGGTAAAT+GGG | + | chr5.4:56194548-56194567 | MS.gene26078:intron | 25.0% |
| ! | ATACTCTAATGAAAGAAAAC+AGG | - | chr5.4:56195971-56195990 | None:intergenic | 25.0% |
| ! | ATATTTGAATTGACAGAACA+AGG | + | chr5.4:56196015-56196034 | MS.gene26078:intron | 25.0% |
| ! | ATTCCAACATTTATATTCCT+GGG | + | chr5.4:56198035-56198054 | MS.gene26078:intron | 25.0% |
| ! | ATTTACCAAAGCAACAAAAT+TGG | + | chr5.4:56196708-56196727 | MS.gene26078:CDS | 25.0% |
| ! | CAACAGTATTCATTCATTAA+TGG | - | chr5.4:56193659-56193678 | None:intergenic | 25.0% |
| ! | CATGTGATATCAATATTTCT+TGG | + | chr5.4:56197605-56197624 | MS.gene26078:intron | 25.0% |
| ! | CCCTTATAATTCCAAAAATA+CGG | - | chr5.4:56197243-56197262 | None:intergenic | 25.0% |
| ! | CTATTTGACAGGAATAAAAA+TGG | - | chr5.4:56197485-56197504 | None:intergenic | 25.0% |
| ! | CTCGTTTGAAAATAAAATCA+TGG | + | chr5.4:56198263-56198282 | MS.gene26078:intron | 25.0% |
| ! | GAATAACTCACTAGAATATA+TGG | + | chr5.4:56197297-56197316 | MS.gene26078:intron | 25.0% |
| ! | GAATGTTGTATCTATTGTTT+GGG | + | chr5.4:56197197-56197216 | MS.gene26078:intron | 25.0% |
| ! | GAGGATATTAAAAGCAAATA+AGG | + | chr5.4:56194827-56194846 | MS.gene26078:CDS | 25.0% |
| ! | TAAAATTGAAACCCAAGAAT+AGG | - | chr5.4:56198123-56198142 | None:intergenic | 25.0% |
| ! | TAGTATATTAACTCGGTAAA+TGG | + | chr5.4:56194547-56194566 | MS.gene26078:intron | 25.0% |
| ! | TATCTACCAACTTATTAGTA+CGG | - | chr5.4:56193714-56193733 | None:intergenic | 25.0% |
| ! | TATTGAAGGAATTATTGCAT+AGG | + | chr5.4:56193833-56193852 | MS.gene26078:CDS | 25.0% |
| ! | TCAAATATAGAGAATAATGC+TGG | + | chr5.4:56196090-56196109 | MS.gene26078:intron | 25.0% |
| ! | TGAATGTTGTATCTATTGTT+TGG | + | chr5.4:56197196-56197215 | MS.gene26078:intron | 25.0% |
| ! | TGTTCAATAGTATAATTCCT+GGG | - | chr5.4:56197983-56198002 | None:intergenic | 25.0% |
| ! | TTAAAAGCAAATAAGGTTGA+CGG | + | chr5.4:56194834-56194853 | MS.gene26078:CDS | 25.0% |
| ! | TTACCGAGTTAATATACTAA+AGG | - | chr5.4:56194546-56194565 | None:intergenic | 25.0% |
| ! | TTGCCTTTAGTATATTAACT+CGG | + | chr5.4:56194540-56194559 | MS.gene26078:intron | 25.0% |
| ! | TTGTTCAATAGTATAATTCC+TGG | - | chr5.4:56197984-56198003 | None:intergenic | 25.0% |
| !! | ATTTTCACAGAAATTTACCT+GGG | - | chr5.4:56197525-56197544 | None:intergenic | 25.0% |
| !! | CATTTTTATTCCTGTCAAAT+AGG | + | chr5.4:56197483-56197502 | MS.gene26078:intron | 25.0% |
| !! | GATAATTTTCTTTGTTCCAT+TGG | + | chr5.4:56197719-56197738 | MS.gene26078:intron | 25.0% |
| !! | GCTTTCAGTTTTCAATATAT+TGG | - | chr5.4:56197089-56197108 | None:intergenic | 25.0% |
| !!! | AACTGTCATTATTTTTTTCC+TGG | - | chr5.4:56197436-56197455 | None:intergenic | 25.0% |
| !!! | ACTGTCATTATTTTTTTCCT+GGG | - | chr5.4:56197435-56197454 | None:intergenic | 25.0% |
| !!! | ATGTTATGTTAATTTGTTCC+CGG | + | chr5.4:56197274-56197293 | MS.gene26078:intron | 25.0% |
| !!! | CATGATTTTATTTTCAAACG+AGG | - | chr5.4:56198265-56198284 | None:intergenic | 25.0% |
| !!! | CCGTATTTTTGGAATTATAA+GGG | + | chr5.4:56197240-56197259 | MS.gene26078:intron | 25.0% |
| !!! | CGTATTTTTGGAATTATAAG+GGG | + | chr5.4:56197241-56197260 | MS.gene26078:intron | 25.0% |
| !!! | GCAGGTATTGAATATTAAAT+GGG | + | chr5.4:56194314-56194333 | MS.gene26078:intron | 25.0% |
| !!! | TAATTCCTGGGAATTTTTTA+TGG | - | chr5.4:56197971-56197990 | None:intergenic | 25.0% |
| !!! | TGCAGGTATTGAATATTAAA+TGG | + | chr5.4:56194313-56194332 | MS.gene26078:intron | 25.0% |
| !!! | TTTTTTTAGTGTGTTATGTG+AGG | + | chr5.4:56195336-56195355 | MS.gene26078:intron | 25.0% |
| AAAGTGTAGTAAGATTGATG+CGG | + | chr5.4:56194920-56194939 | MS.gene26078:CDS | 30.0% | |
| AACAAAACTCGCAAAATTAG+GGG | - | chr5.4:56196259-56196278 | None:intergenic | 30.0% | |
| AACTAACTGCATTTACTTAC+AGG | + | chr5.4:56198401-56198420 | MS.gene26078:intron | 30.0% | |
| AAGACCTATATAGGAATGAA+TGG | + | chr5.4:56193805-56193824 | MS.gene26078:CDS | 30.0% | |
| AAGCATTACCAATGAATAGT+CGG | - | chr5.4:56196902-56196921 | None:intergenic | 30.0% | |
| AAGCTTGCACATCAAAAAAA+GGG | - | chr5.4:56194731-56194750 | None:intergenic | 30.0% | |
| AATAAAAATGGGCAAAACGT+GGG | - | chr5.4:56197473-56197492 | None:intergenic | 30.0% | |
| AATAAAGGAGCGAACAATAA+AGG | + | chr5.4:56196647-56196666 | MS.gene26078:CDS | 30.0% | |
| AATAGGATTCCCAACATTTA+CGG | - | chr5.4:56198106-56198125 | None:intergenic | 30.0% | |
| ACAAAGGTCTAGATGTTTAA+AGG | - | chr5.4:56193905-56193924 | None:intergenic | 30.0% | |
| ACTGTGTATAAAACATTTCC+TGG | - | chr5.4:56198309-56198328 | None:intergenic | 30.0% | |
| AGATATGTTGGAATCTTCTT+TGG | + | chr5.4:56196670-56196689 | MS.gene26078:CDS | 30.0% | |
| AGGGTTACAAAATTAATACC+TGG | - | chr5.4:56198071-56198090 | None:intergenic | 30.0% | |
| AGTACCATTCATTCCTATAT+AGG | - | chr5.4:56193812-56193831 | None:intergenic | 30.0% | |
| AGTCATCATTATGATGTTGT+AGG | + | chr5.4:56195847-56195866 | MS.gene26078:intron | 30.0% | |
| ATAGAAGTCCAAACTCAATT+GGG | - | chr5.4:56197752-56197771 | None:intergenic | 30.0% | |
| ATATTCTAGTGAGTTATTCC+CGG | - | chr5.4:56197296-56197315 | None:intergenic | 30.0% | |
| ATCTACCAACTTATTAGTAC+GGG | - | chr5.4:56193713-56193732 | None:intergenic | 30.0% | |
| ATGGAAGAAGATAAAGACAA+TGG | + | chr5.4:56195101-56195120 | MS.gene26078:CDS | 30.0% | |
| CAATTAATCATCATTGACAG+CGG | + | chr5.4:56197003-56197022 | MS.gene26078:intron | 30.0% | |
| CCAGCAATATTAATAACCTA+AGG | - | chr5.4:56195517-56195536 | None:intergenic | 30.0% | |
| CCTTAGGTTATTAATATTGC+TGG | + | chr5.4:56195514-56195533 | MS.gene26078:intron | 30.0% | |
| GAAAAGCAGAAGAAAATGAT+GGG | + | chr5.4:56194970-56194989 | MS.gene26078:CDS | 30.0% | |
| GAACAATAAAGGAGATATGT+TGG | + | chr5.4:56196658-56196677 | MS.gene26078:CDS | 30.0% | |
| GAATTACATATGCCATTGTT+TGG | + | chr5.4:56197369-56197388 | MS.gene26078:intron | 30.0% | |
| GATACAGTTATACACATTTC+TGG | + | chr5.4:56194276-56194295 | MS.gene26078:CDS | 30.0% | |
| GATTCCAACATTTATATTCC+TGG | + | chr5.4:56198034-56198053 | MS.gene26078:intron | 30.0% | |
| GCAATTAGGCTGTATATTTA+GGG | - | chr5.4:56197057-56197076 | None:intergenic | 30.0% | |
| GGAACAAAAAAAATATGCCT+TGG | + | chr5.4:56197398-56197417 | MS.gene26078:intron | 30.0% | |
| GGGTGAAGAAGAAAAAAAAA+TGG | + | chr5.4:56195082-56195101 | MS.gene26078:CDS | 30.0% | |
| GGGTTACAAAATTAATACCT+GGG | - | chr5.4:56198070-56198089 | None:intergenic | 30.0% | |
| GGTATATGTTCTTAAGTACT+TGG | + | chr5.4:56196834-56196853 | MS.gene26078:CDS | 30.0% | |
| TAAACATCTAGACCTTTGTT+TGG | + | chr5.4:56193906-56193925 | MS.gene26078:CDS | 30.0% | |
| TAAAGGTTGAATACACATCA+CGG | - | chr5.4:56195646-56195665 | None:intergenic | 30.0% | |
| TAACCTTCGCATTTGAAAAA+AGG | - | chr5.4:56194516-56194535 | None:intergenic | 30.0% | |
| TAAGCTTGCACATCAAAAAA+AGG | - | chr5.4:56194732-56194751 | None:intergenic | 30.0% | |
| TATATTTCATTCCGATCTCA+CGG | + | chr5.4:56198223-56198242 | MS.gene26078:intron | 30.0% | |
| TCTTCATATCCACAAGATAT+CGG | - | chr5.4:56193789-56193808 | None:intergenic | 30.0% | |
| TGCAATTAGGCTGTATATTT+AGG | - | chr5.4:56197058-56197077 | None:intergenic | 30.0% | |
| TGCAGTATCTAATACAAATC+TGG | - | chr5.4:56198493-56198512 | None:intergenic | 30.0% | |
| TGGAAGAAGAAAATGATGAT+GGG | + | chr5.4:56195036-56195055 | MS.gene26078:CDS | 30.0% | |
| TGGAAGAAGATAAAGACAAT+GGG | + | chr5.4:56195102-56195121 | MS.gene26078:CDS | 30.0% | |
| TGGCTGAAAAGGAAAAAAAA+AGG | + | chr5.4:56195147-56195166 | MS.gene26078:CDS | 30.0% | |
| TGGTGAAGAGGAAAAAAAAT+TGG | + | chr5.4:56195016-56195035 | MS.gene26078:CDS | 30.0% | |
| TGTAAGTAAATGCAGTTAGT+TGG | - | chr5.4:56198402-56198421 | None:intergenic | 30.0% | |
| TGTGTAAGTTATTTGTTTCC+AGG | + | chr5.4:56198288-56198307 | MS.gene26078:intron | 30.0% | |
| TTATACACAGTAACACACAT+TGG | + | chr5.4:56198318-56198337 | MS.gene26078:intron | 30.0% | |
| TTATTCCTGTCAAATAGGAT+TGG | + | chr5.4:56197488-56197507 | MS.gene26078:intron | 30.0% | |
| TTGGAAGAAGAAAATGATGA+TGG | + | chr5.4:56195035-56195054 | MS.gene26078:CDS | 30.0% | |
| TTTATTCTGCACACATGAAA+AGG | + | chr5.4:56195205-56195224 | MS.gene26078:CDS | 30.0% | |
| TTTCCCAGGAATATAAATGT+TGG | - | chr5.4:56198041-56198060 | None:intergenic | 30.0% | |
| ! | AAATTTTGCAGTCATGATTG+TGG | + | chr5.4:56196811-56196830 | MS.gene26078:intron | 30.0% |
| ! | AATGTTGGAATCTTATTTCC+AGG | - | chr5.4:56198026-56198045 | None:intergenic | 30.0% |
| ! | AATTTTGCAGTCATGATTGT+GGG | + | chr5.4:56196812-56196831 | MS.gene26078:intron | 30.0% |
| ! | CTGTATCATTCTTTTGTTGA+TGG | - | chr5.4:56194263-56194282 | None:intergenic | 30.0% |
| ! | GATTTTCACAGAAATTTACC+TGG | - | chr5.4:56197526-56197545 | None:intergenic | 30.0% |
| ! | GTAGTGGAATTGATGAATAA+AGG | + | chr5.4:56196632-56196651 | MS.gene26078:CDS | 30.0% |
| ! | TTAATGTGATTAGTTGGTTG+AGG | + | chr5.4:56194617-56194636 | MS.gene26078:intron | 30.0% |
| ! | TTTTGATGTGCAAGCTTATA+TGG | + | chr5.4:56194734-56194753 | MS.gene26078:CDS | 30.0% |
| !! | ACTAACCAATTTTGTTGCTT+TGG | - | chr5.4:56196716-56196735 | None:intergenic | 30.0% |
| !! | CTATTGTTTGGGTTTTTAAC+TGG | + | chr5.4:56197208-56197227 | MS.gene26078:intron | 30.0% |
| !! | TGAGGTAGTTGATGATTTAA+AGG | + | chr5.4:56195701-56195720 | MS.gene26078:CDS | 30.0% |
| !! | TGTCAGATTATTTTTCGGTA+CGG | + | chr5.4:56195593-56195612 | MS.gene26078:intron | 30.0% |
| !! | TGTTATGTTAATTTGTTCCC+GGG | + | chr5.4:56197275-56197294 | MS.gene26078:intron | 30.0% |
| !! | TTTATTTTCAAACGAGGGTT+GGG | - | chr5.4:56198259-56198278 | None:intergenic | 30.0% |
| !!! | AAACCTTTTTTCAAATGCGA+AGG | + | chr5.4:56194510-56194529 | MS.gene26078:CDS | 30.0% |
| !!! | AACTACATTTTTTCATGTCG+CGG | + | chr5.4:56195267-56195286 | MS.gene26078:intron | 30.0% |
| !!! | AGGAGTTTGCTGATTTATTT+TGG | + | chr5.4:56196035-56196054 | MS.gene26078:intron | 30.0% |
| !!! | CACTTTTTTCTACAATTTCC+TGG | + | chr5.4:56198005-56198024 | MS.gene26078:intron | 30.0% |
| !!! | CATTGTGGTTTTGTCTATAT+GGG | + | chr5.4:56196149-56196168 | MS.gene26078:intron | 30.0% |
| !!! | GACTTCTATGCATTGATTTT+GGG | + | chr5.4:56197763-56197782 | MS.gene26078:intron | 30.0% |
| !!! | GCCGTATTTTTGGAATTATA+AGG | + | chr5.4:56197239-56197258 | MS.gene26078:intron | 30.0% |
| !!! | TTTTATTTTCAAACGAGGGT+TGG | - | chr5.4:56198260-56198279 | None:intergenic | 30.0% |
| AAGATTGATGCGGATAATGA+TGG | + | chr5.4:56194930-56194949 | MS.gene26078:CDS | 35.0% | |
| AAGTTGGATGATGAAGATGT+TGG | + | chr5.4:56194996-56195015 | MS.gene26078:CDS | 35.0% | |
| AATGTTGGGAATCCTATTCT+TGG | + | chr5.4:56198108-56198127 | MS.gene26078:intron | 35.0% | |
| AATTCCAACCTTAGATTCCT+GGG | - | chr5.4:56197354-56197373 | None:intergenic | 35.0% | |
| ACAGGATTTAGAAATGTCGA+TGG | + | chr5.4:56197908-56197927 | MS.gene26078:intron | 35.0% | |
| ACCAACTTGAGAATGGTTAA+CGG | - | chr5.4:56194691-56194710 | None:intergenic | 35.0% | |
| ACGCTCTTAGTACCTATAAT+TGG | + | chr5.4:56194181-56194200 | MS.gene26078:CDS | 35.0% | |
| ACTTTCCAATCCTATTTGAC+AGG | - | chr5.4:56197496-56197515 | None:intergenic | 35.0% | |
| AGAAGATAAAGACAATGGGA+TGG | + | chr5.4:56195106-56195125 | MS.gene26078:CDS | 35.0% | |
| AGATTGATGCGGATAATGAT+GGG | + | chr5.4:56194931-56194950 | MS.gene26078:CDS | 35.0% | |
| AGCATTACCAATGAATAGTC+GGG | - | chr5.4:56196901-56196920 | None:intergenic | 35.0% | |
| AGGTGTAGATGATTTCTGAT+TGG | + | chr5.4:56195867-56195886 | MS.gene26078:intron | 35.0% | |
| AGGTTATTAATATTGCTGGC+AGG | + | chr5.4:56195518-56195537 | MS.gene26078:intron | 35.0% | |
| ATATAGGAGGTGATAAGCAT+TGG | - | chr5.4:56197564-56197583 | None:intergenic | 35.0% | |
| ATATCCACAAGATATCGGAA+CGG | - | chr5.4:56193784-56193803 | None:intergenic | 35.0% | |
| ATATCCTCATATCATCCTCA+AGG | - | chr5.4:56194815-56194834 | None:intergenic | 35.0% | |
| ATATGCCATTGTTTGGTAGA+TGG | + | chr5.4:56197376-56197395 | MS.gene26078:intron | 35.0% | |
| ATATTTCATTCCGATCTCAC+GGG | + | chr5.4:56198224-56198243 | MS.gene26078:intron | 35.0% | |
| ATGTTGGGAATCCTATTCTT+GGG | + | chr5.4:56198109-56198128 | MS.gene26078:intron | 35.0% | |
| ATTGGATGTCTACTGCAATT+AGG | - | chr5.4:56197071-56197090 | None:intergenic | 35.0% | |
| CATAGAAGTCCAAACTCAAT+TGG | - | chr5.4:56197753-56197772 | None:intergenic | 35.0% | |
| CATGATGAAGTTCGAAAACA+TGG | + | chr5.4:56195550-56195569 | MS.gene26078:CDS | 35.0% | |
| CATTAACAATTGGACCAAAG+TGG | + | chr5.4:56194465-56194484 | MS.gene26078:CDS | 35.0% | |
| CCTGGGTATAATTTATTCCA+AGG | - | chr5.4:56197418-56197437 | None:intergenic | 35.0% | |
| CCTTGGAATAAATTATACCC+AGG | + | chr5.4:56197415-56197434 | MS.gene26078:intron | 35.0% | |
| CGCTCTTAGTACCTATAATT+GGG | + | chr5.4:56194182-56194201 | MS.gene26078:CDS | 35.0% | |
| CGGAAAATATAACACACACA+AGG | - | chr5.4:56194109-56194128 | None:intergenic | 35.0% | |
| CTCTACCTAAAATTCCCTTT+AGG | + | chr5.4:56196114-56196133 | MS.gene26078:intron | 35.0% | |
| CTTATATGGCTGAACATCAA+AGG | + | chr5.4:56194748-56194767 | MS.gene26078:CDS | 35.0% | |
| GAAGGAATTATTGCATAGGT+GGG | + | chr5.4:56193837-56193856 | MS.gene26078:CDS | 35.0% | |
| GAATAAAAATGGGCAAAACG+TGG | - | chr5.4:56197474-56197493 | None:intergenic | 35.0% | |
| GAGGGAAAACAAACGAAAAA+GGG | + | chr5.4:56193561-56193580 | MS.gene26078:CDS | 35.0% | |
| GCAAAATTAGGGGTTACAAT+AGG | - | chr5.4:56196249-56196268 | None:intergenic | 35.0% | |
| GCTCTTAGTACCTATAATTG+GGG | + | chr5.4:56194183-56194202 | MS.gene26078:CDS | 35.0% | |
| GGAAAAGCAGAAGAAAATGA+TGG | + | chr5.4:56194969-56194988 | MS.gene26078:CDS | 35.0% | |
| GGAAAATAAAAATGGTTCCC+AGG | + | chr5.4:56197334-56197353 | MS.gene26078:intron | 35.0% | |
| GGAAAGCAAATCTTTGTGTT+CGG | - | chr5.4:56194781-56194800 | None:intergenic | 35.0% | |
| GGGTTTGTGTTGTATTAGTT+CGG | + | chr5.4:56196169-56196188 | MS.gene26078:intron | 35.0% | |
| GTAATACAAGAAAGAGAACC+TGG | + | chr5.4:56197812-56197831 | MS.gene26078:intron | 35.0% | |
| GTCATTTGATTAGATATGGG+CGG | + | chr5.4:56194396-56194415 | MS.gene26078:intron | 35.0% | |
| GTGGATATGAAGACCTATAT+AGG | + | chr5.4:56193796-56193815 | MS.gene26078:CDS | 35.0% | |
| GTTAACATGTGTAACATTCC+CGG | + | chr5.4:56198160-56198179 | MS.gene26078:intron | 35.0% | |
| TAACTGCATTTACTTACAGG+AGG | + | chr5.4:56198404-56198423 | MS.gene26078:intron | 35.0% | |
| TAATTCCAACCTTAGATTCC+TGG | - | chr5.4:56197355-56197374 | None:intergenic | 35.0% | |
| TAGAAGTCCAAACTCAATTG+GGG | - | chr5.4:56197751-56197770 | None:intergenic | 35.0% | |
| TAGAATTGTTAAGACTCAGG+TGG | + | chr5.4:56197112-56197131 | MS.gene26078:intron | 35.0% | |
| TAGTGTACATTCTAAGCTGA+AGG | + | chr5.4:56194029-56194048 | MS.gene26078:CDS | 35.0% | |
| TATGCCATTGTTTGGTAGAT+GGG | + | chr5.4:56197377-56197396 | MS.gene26078:intron | 35.0% | |
| TATGTTGGAATCTTCTTTGG+AGG | + | chr5.4:56196673-56196692 | MS.gene26078:CDS | 35.0% | |
| TATTCTAGTGAGTTATTCCC+GGG | - | chr5.4:56197295-56197314 | None:intergenic | 35.0% | |
| TCAATTGGGGAAAATTCCAA+TGG | - | chr5.4:56197738-56197757 | None:intergenic | 35.0% | |
| TCTACCAACTTATTAGTACG+GGG | - | chr5.4:56193712-56193731 | None:intergenic | 35.0% | |
| TCTTAAGTACTTGGAGTTGT+GGG | + | chr5.4:56196843-56196862 | MS.gene26078:CDS | 35.0% | |
| TGAAGGAATTATTGCATAGG+TGG | + | chr5.4:56193836-56193855 | MS.gene26078:CDS | 35.0% | |
| TGAGGGAAAACAAACGAAAA+AGG | + | chr5.4:56193560-56193579 | MS.gene26078:CDS | 35.0% | |
| TGATGCCATAAAAAATTCCC+AGG | + | chr5.4:56197963-56197982 | MS.gene26078:intron | 35.0% | |
| TGTTAGGCATGGGATAATAA+AGG | - | chr5.4:56195663-56195682 | None:intergenic | 35.0% | |
| TTAACATGTGTAACATTCCC+GGG | + | chr5.4:56198161-56198180 | MS.gene26078:intron | 35.0% | |
| TTAACCGATCAATAAATCCG+CGG | - | chr5.4:56198523-56198542 | None:intergenic | 35.0% | |
| TTACACATCCCTTTCCATAT+TGG | - | chr5.4:56197796-56197815 | None:intergenic | 35.0% | |
| TTCTTAAGTACTTGGAGTTG+TGG | + | chr5.4:56196842-56196861 | MS.gene26078:CDS | 35.0% | |
| TTGTGTTGTATTAGTTCGGT+GGG | + | chr5.4:56196173-56196192 | MS.gene26078:intron | 35.0% | |
| TTTACCGGAAACTAGTGATA+GGG | + | chr5.4:56193957-56193976 | MS.gene26078:CDS | 35.0% | |
| TTTGTGTTGTATTAGTTCGG+TGG | + | chr5.4:56196172-56196191 | MS.gene26078:intron | 35.0% | |
| ! | AACACAAAGATTTGCTTTCC+CGG | + | chr5.4:56194781-56194800 | MS.gene26078:CDS | 35.0% |
| ! | AGAAAATGATGGGATGAAGT+TGG | + | chr5.4:56194980-56194999 | MS.gene26078:CDS | 35.0% |
| ! | ATTTTGCAGTCATGATTGTG+GGG | + | chr5.4:56196813-56196832 | MS.gene26078:intron | 35.0% |
| ! | GAATTTTCCCCAATTGAGTT+TGG | + | chr5.4:56197741-56197760 | MS.gene26078:intron | 35.0% |
| ! | GTTTTCCACGCATTAACAAT+TGG | + | chr5.4:56194455-56194474 | MS.gene26078:CDS | 35.0% |
| ! | GTTTTGTGTGGTTTTTTGTG+CGG | + | chr5.4:56196202-56196221 | MS.gene26078:intron | 35.0% |
| ! | TGATGATGATATGGCTGAAA+AGG | + | chr5.4:56195136-56195155 | MS.gene26078:CDS | 35.0% |
| ! | TGTCTAGAATGTTGATGAGT+GGG | + | chr5.4:56195897-56195916 | MS.gene26078:intron | 35.0% |
| ! | TTACAGAAAGTCCGTTTTGA+AGG | + | chr5.4:56196608-56196627 | MS.gene26078:intron | 35.0% |
| ! | TTATTTTCAAACGAGGGTTG+GGG | - | chr5.4:56198258-56198277 | None:intergenic | 35.0% |
| ! | TTGTCTAGAATGTTGATGAG+TGG | + | chr5.4:56195896-56195915 | MS.gene26078:intron | 35.0% |
| ! | TTTTGTGTGGTTTTTTGTGC+GGG | + | chr5.4:56196203-56196222 | MS.gene26078:intron | 35.0% |
| !! | AAATGTCGATGGTATTGACA+GGG | + | chr5.4:56197919-56197938 | MS.gene26078:intron | 35.0% |
| !! | AACCATTCTCAAGTTGGTAT+TGG | + | chr5.4:56194693-56194712 | MS.gene26078:CDS | 35.0% |
| !! | AAGGTTGATGATGAAGATGT+GGG | + | chr5.4:56195062-56195081 | MS.gene26078:CDS | 35.0% |
| !! | AGAAAATGATGATGGGATGA+AGG | + | chr5.4:56195043-56195062 | MS.gene26078:CDS | 35.0% |
| !! | TAATGATGGGTTGAAAAGTG+AGG | + | chr5.4:56194944-56194963 | MS.gene26078:CDS | 35.0% |
| !! | TACAGAAAGTCCGTTTTGAA+GGG | + | chr5.4:56196609-56196628 | MS.gene26078:intron | 35.0% |
| !! | TATTGTAGGAGAGTGTTTAC+CGG | + | chr5.4:56193942-56193961 | MS.gene26078:CDS | 35.0% |
| !! | TTGTTTGGGTTTTTAACTGG+AGG | + | chr5.4:56197211-56197230 | MS.gene26078:intron | 35.0% |
| !! | TTTTCCATGTCTTGTTGTGT+TGG | - | chr5.4:56194651-56194670 | None:intergenic | 35.0% |
| !!! | ACTACATTTTTTCATGTCGC+GGG | + | chr5.4:56195268-56195287 | MS.gene26078:intron | 35.0% |
| !!! | ATGCATTGATTTTGGGATGA+TGG | + | chr5.4:56197770-56197789 | MS.gene26078:intron | 35.0% |
| !!! | CGAATTTGTTTTATGCAACG+TGG | + | chr5.4:56196344-56196363 | MS.gene26078:intron | 35.0% |
| !!! | GATTGGAAAGTTTTATTCCC+AGG | + | chr5.4:56197505-56197524 | MS.gene26078:intron | 35.0% |
| !!! | GCATTGTGGTTTTGTCTATA+TGG | + | chr5.4:56196148-56196167 | MS.gene26078:intron | 35.0% |
| !!! | GGACTTCTATGCATTGATTT+TGG | + | chr5.4:56197762-56197781 | MS.gene26078:intron | 35.0% |
| AAAACGCTTAATTGGACCAC+TGG | - | chr5.4:56194440-56194459 | None:intergenic | 40.0% | |
| AAATGGTTCCCAGGAATCTA+AGG | + | chr5.4:56197343-56197362 | MS.gene26078:intron | 40.0% | |
| AACAAACGCACCGTAAATGT+TGG | + | chr5.4:56198093-56198112 | MS.gene26078:intron | 40.0% | |
| AACAATTGGACCAAAGTGGA+TGG | + | chr5.4:56194469-56194488 | MS.gene26078:CDS | 40.0% | |
| AACAGCAACACCCCAATTAT+AGG | - | chr5.4:56194196-56194215 | None:intergenic | 40.0% | |
| AAGAAAACAGGCAGTGATGA+AGG | - | chr5.4:56195959-56195978 | None:intergenic | 40.0% | |
| AAGCAAATAAGGTTGACGGT+AGG | + | chr5.4:56194838-56194857 | MS.gene26078:CDS | 40.0% | |
| AATGCCCCGTACTAATAAGT+TGG | + | chr5.4:56193705-56193724 | MS.gene26078:CDS | 40.0% | |
| ACAAACGCACCGTAAATGTT+GGG | + | chr5.4:56198094-56198113 | MS.gene26078:intron | 40.0% | |
| ACAGTGAAAGAAATGCCTCA+AGG | + | chr5.4:56196482-56196501 | MS.gene26078:CDS | 40.0% | |
| ACTTACAGGAGGATATCCTT+CGG | + | chr5.4:56198415-56198434 | MS.gene26078:intron | 40.0% | |
| AGCAAATAAGGTTGACGGTA+GGG | + | chr5.4:56194839-56194858 | MS.gene26078:CDS | 40.0% | |
| AGTTTAGGCTCTTCATCAAC+AGG | + | chr5.4:56197890-56197909 | MS.gene26078:intron | 40.0% | |
| ATACCCGCGGATTTATTGAT+CGG | + | chr5.4:56198516-56198535 | MS.gene26078:CDS | 40.0% | |
| ATGCGTGGAAAACGCTTAAT+TGG | - | chr5.4:56194448-56194467 | None:intergenic | 40.0% | |
| ATTCCACTACCCCTTCAAAA+CGG | - | chr5.4:56196622-56196641 | None:intergenic | 40.0% | |
| ATTTACGGTGCGTTTGTTTG+AGG | - | chr5.4:56198091-56198110 | None:intergenic | 40.0% | |
| CAATCCTTGAGGATGATATG+AGG | + | chr5.4:56194808-56194827 | MS.gene26078:CDS | 40.0% | |
| CAGTGAAATTGTTTGTCGTC+TGG | + | chr5.4:56198443-56198462 | MS.gene26078:CDS | 40.0% | |
| CATACATTGTCCTCTTCCTA+TGG | - | chr5.4:56196447-56196466 | None:intergenic | 40.0% | |
| CGAAAAAGGGATTGTGTTGT+TGG | + | chr5.4:56193574-56193593 | MS.gene26078:CDS | 40.0% | |
| CTAAAATTCCCTTTAGGCAG+TGG | + | chr5.4:56196120-56196139 | MS.gene26078:intron | 40.0% | |
| CTCAGGAAGGATTAGAGTTT+AGG | + | chr5.4:56197875-56197894 | MS.gene26078:intron | 40.0% | |
| CTCCAATACCAACTTGAGAA+TGG | - | chr5.4:56194698-56194717 | None:intergenic | 40.0% | |
| GAACATTTATCCCTAACCAG+TGG | + | chr5.4:56194421-56194440 | MS.gene26078:CDS | 40.0% | |
| GCAAACCTAAAGCCAAACAA+AGG | - | chr5.4:56193921-56193940 | None:intergenic | 40.0% | |
| GCTGTATATTTAGGGAATGC+GGG | - | chr5.4:56197049-56197068 | None:intergenic | 40.0% | |
| GGAAAAAATTCCCGTGAGAT+CGG | - | chr5.4:56198237-56198256 | None:intergenic | 40.0% | |
| GGCATTTGAGTCTTTATCTG+TGG | - | chr5.4:56193691-56193710 | None:intergenic | 40.0% | |
| GGCTGTATATTTAGGGAATG+CGG | - | chr5.4:56197050-56197069 | None:intergenic | 40.0% | |
| GGTAAACACTCTCCTACAAT+AGG | - | chr5.4:56193943-56193962 | None:intergenic | 40.0% | |
| GTTTACCGGAAACTAGTGAT+AGG | + | chr5.4:56193956-56193975 | MS.gene26078:CDS | 40.0% | |
| TAAAGACAATGGGATGGAGT+TGG | + | chr5.4:56195112-56195131 | MS.gene26078:CDS | 40.0% | |
| TAACCGATCAATAAATCCGC+GGG | - | chr5.4:56198522-56198541 | None:intergenic | 40.0% | |
| TATATGGGTGCGTTTGTTTG+AGG | + | chr5.4:56197313-56197332 | MS.gene26078:intron | 40.0% | |
| TATGGCTGAACATCAAAGGT+TGG | + | chr5.4:56194752-56194771 | MS.gene26078:CDS | 40.0% | |
| TCAAGATGTATATGCCTCGT+TGG | + | chr5.4:56195766-56195785 | MS.gene26078:CDS | 40.0% | |
| TGTTCCCATCTACCAAACAA+TGG | - | chr5.4:56197384-56197403 | None:intergenic | 40.0% | |
| TTGGTCCAATTGTTAATGCG+TGG | - | chr5.4:56194463-56194482 | None:intergenic | 40.0% | |
| TTTACGGTGCGTTTGTTTGA+GGG | - | chr5.4:56198090-56198109 | None:intergenic | 40.0% | |
| TTTGCGCATCAGACAATGTT+CGG | - | chr5.4:56193741-56193760 | None:intergenic | 40.0% | |
| ! | AATCCTTCCTGAGTTCTAGT+CGG | - | chr5.4:56197868-56197887 | None:intergenic | 40.0% |
| ! | ACACAAAGATTTGCTTTCCC+GGG | + | chr5.4:56194782-56194801 | MS.gene26078:CDS | 40.0% |
| ! | AGTAGCTTGGGATTTAGAGT+AGG | + | chr5.4:56193865-56193884 | MS.gene26078:CDS | 40.0% |
| ! | ATCTTCTTTGGAGGTTGTAG+TGG | + | chr5.4:56196682-56196701 | MS.gene26078:CDS | 40.0% |
| ! | CACTGCCTAAAGGGAATTTT+AGG | - | chr5.4:56196122-56196141 | None:intergenic | 40.0% |
| ! | CTAACCCTATCACTAGTTTC+CGG | - | chr5.4:56193964-56193983 | None:intergenic | 40.0% |
| ! | CTTAATTGGACCACTGGTTA+GGG | - | chr5.4:56194434-56194453 | None:intergenic | 40.0% |
| ! | GATGATGGCCAATATGGAAA+GGG | + | chr5.4:56197785-56197804 | MS.gene26078:intron | 40.0% |
| ! | GATTTAAAGGCACATCCTGA+AGG | + | chr5.4:56195714-56195733 | MS.gene26078:CDS | 40.0% |
| ! | GCTTTAGGTTTGCCTATTGT+AGG | + | chr5.4:56193928-56193947 | MS.gene26078:CDS | 40.0% |
| ! | GGAGTTGGATGATGATGATA+TGG | + | chr5.4:56195127-56195146 | MS.gene26078:CDS | 40.0% |
| ! | GGAGTTTTTCCAATGCATGA+AGG | + | chr5.4:56195381-56195400 | MS.gene26078:CDS | 40.0% |
| ! | TGATGAAGATGTTGGTGAAG+AGG | + | chr5.4:56195004-56195023 | MS.gene26078:CDS | 40.0% |
| ! | TGATTAGTTGGTTGAGGACT+TGG | + | chr5.4:56194623-56194642 | MS.gene26078:intron | 40.0% |
| ! | TGTGTTGTATTAGTTCGGTG+GGG | + | chr5.4:56196174-56196193 | MS.gene26078:intron | 40.0% |
| !! | AATGTCGATGGTATTGACAG+GGG | + | chr5.4:56197920-56197939 | MS.gene26078:intron | 40.0% |
| !! | CTAGACCTTTGTTTGGCTTT+AGG | + | chr5.4:56193913-56193932 | MS.gene26078:CDS | 40.0% |
| !! | GAAATGTCGATGGTATTGAC+AGG | + | chr5.4:56197918-56197937 | MS.gene26078:intron | 40.0% |
| !! | GAAGGTTGATGATGAAGATG+TGG | + | chr5.4:56195061-56195080 | MS.gene26078:CDS | 40.0% |
| !!! | ACAGAAAGTCCGTTTTGAAG+GGG | + | chr5.4:56196610-56196629 | MS.gene26078:intron | 40.0% |
| !!! | TTTGTGTGGTTTTTTGTGCG+GGG | + | chr5.4:56196204-56196223 | MS.gene26078:intron | 40.0% |
| !!! | TTTTGGGATGATGGCCAATA+TGG | + | chr5.4:56197779-56197798 | MS.gene26078:intron | 40.0% |
| AACATGACCTCCATCCACTT+TGG | - | chr5.4:56194482-56194501 | None:intergenic | 45.0% | |
| AACTCCGTTCCGATATCTTG+TGG | + | chr5.4:56193777-56193796 | MS.gene26078:CDS | 45.0% | |
| AAGCTGAAGGTCCTTCAAGA+AGG | + | chr5.4:56194042-56194061 | MS.gene26078:CDS | 45.0% | |
| AAGTACTTGGAGTTGTGGGA+TGG | + | chr5.4:56196847-56196866 | MS.gene26078:CDS | 45.0% | |
| AATTGGACCAAAGTGGATGG+AGG | + | chr5.4:56194472-56194491 | MS.gene26078:CDS | 45.0% | |
| ACACTCCTACAACTAAGTCC+CGG | - | chr5.4:56198182-56198201 | None:intergenic | 45.0% | |
| AGATACTGCAAAGATACCCG+CGG | + | chr5.4:56198503-56198522 | MS.gene26078:CDS | 45.0% | |
| AGCTGAAGGTCCTTCAAGAA+GGG | + | chr5.4:56194043-56194062 | MS.gene26078:CDS | 45.0% | |
| AGTAGCATGGAAGTAGGAAG+TGG | + | chr5.4:56194879-56194898 | MS.gene26078:CDS | 45.0% | |
| ATCCTCAAGGATTGAAACCC+GGG | - | chr5.4:56194802-56194821 | None:intergenic | 45.0% | |
| ATGCCAAATCCACTGCCTAA+AGG | - | chr5.4:56196132-56196151 | None:intergenic | 45.0% | |
| ATGCCAAGTAGCATGGAAGT+AGG | + | chr5.4:56194873-56194892 | MS.gene26078:CDS | 45.0% | |
| ATTATCCAAACGCTGCCTTG+AGG | - | chr5.4:56196500-56196519 | None:intergenic | 45.0% | |
| CAATTTCACTGCGAATCCGA+AGG | - | chr5.4:56198434-56198453 | None:intergenic | 45.0% | |
| CATCCTCAAGGATTGAAACC+CGG | - | chr5.4:56194803-56194822 | None:intergenic | 45.0% | |
| CATGCATTGGAAAAACTCCC+CGG | - | chr5.4:56195380-56195399 | None:intergenic | 45.0% | |
| CATGTTACGTGTTGGACCAT+AGG | + | chr5.4:56196428-56196447 | MS.gene26078:CDS | 45.0% | |
| CATTGGAGTTTACGTCCTTC+AGG | - | chr5.4:56195732-56195751 | None:intergenic | 45.0% | |
| CTGAAGGACGTAAACTCCAA+TGG | + | chr5.4:56195730-56195749 | MS.gene26078:CDS | 45.0% | |
| CTTCCTACTTCCATGCTACT+TGG | - | chr5.4:56194879-56194898 | None:intergenic | 45.0% | |
| GAAGAGGACAATGTATGTGC+TGG | + | chr5.4:56196450-56196469 | MS.gene26078:CDS | 45.0% | |
| GAGTATGCCCGACTATTCAT+TGG | + | chr5.4:56196891-56196910 | MS.gene26078:CDS | 45.0% | |
| GCAGCGTTTGGATAATGCAA+TGG | + | chr5.4:56196504-56196523 | MS.gene26078:CDS | 45.0% | |
| GCCGTTAACCATTCTCAAGT+TGG | + | chr5.4:56194687-56194706 | MS.gene26078:CDS | 45.0% | |
| GGAAGTGGGTCAAAACATGT+AGG | + | chr5.4:56194894-56194913 | MS.gene26078:CDS | 45.0% | |
| GGTTCCAACACAACAAGACA+TGG | + | chr5.4:56194644-56194663 | MS.gene26078:CDS | 45.0% | |
| GTAGCATGGAAGTAGGAAGT+GGG | + | chr5.4:56194880-56194899 | MS.gene26078:CDS | 45.0% | |
| GTATATTTAGGGAATGCGGG+AGG | - | chr5.4:56197046-56197065 | None:intergenic | 45.0% | |
| GTGGGATGGTGAAGCAAAAT+GGG | + | chr5.4:56196861-56196880 | MS.gene26078:CDS | 45.0% | |
| TAATCCCTGCTAGACAAACC+AGG | - | chr5.4:56197833-56197852 | None:intergenic | 45.0% | |
| TATTCCGATGCCAAGTAGCA+TGG | + | chr5.4:56194866-56194885 | MS.gene26078:CDS | 45.0% | |
| TCAATACCTGCAATACGGCT+GGG | - | chr5.4:56194305-56194324 | None:intergenic | 45.0% | |
| TGAATTTCCGCTCAGTCCAT+TGG | - | chr5.4:56195749-56195768 | None:intergenic | 45.0% | |
| TGCCAAATCCACTGCCTAAA+GGG | - | chr5.4:56196131-56196150 | None:intergenic | 45.0% | |
| TGGGATGGTGAAGCAAAATG+GGG | + | chr5.4:56196862-56196881 | MS.gene26078:CDS | 45.0% | |
| TGTGGGATGGTGAAGCAAAA+TGG | + | chr5.4:56196860-56196879 | MS.gene26078:CDS | 45.0% | |
| TTCAATACCTGCAATACGGC+TGG | - | chr5.4:56194306-56194325 | None:intergenic | 45.0% | |
| ! | ACTTCCATGCTACTTGGCAT+CGG | - | chr5.4:56194873-56194892 | None:intergenic | 45.0% |
| ! | AGAACCTGGTTTGTCTAGCA+GGG | + | chr5.4:56197826-56197845 | MS.gene26078:intron | 45.0% |
| ! | GCTTAATTGGACCACTGGTT+AGG | - | chr5.4:56194435-56194454 | None:intergenic | 45.0% |
| ! | GGATGATGGCCAATATGGAA+AGG | + | chr5.4:56197784-56197803 | MS.gene26078:intron | 45.0% |
| ! | GTGTTGTATTAGTTCGGTGG+GGG | + | chr5.4:56196175-56196194 | MS.gene26078:intron | 45.0% |
| ! | TGGGATTTAGAGTAGGCGTT+AGG | + | chr5.4:56193872-56193891 | MS.gene26078:CDS | 45.0% |
| ! | TGTTGTATTAGTTCGGTGGG+GGG | + | chr5.4:56196176-56196195 | MS.gene26078:intron | 45.0% |
| ! | TTCCCTTTAGGCAGTGGATT+TGG | + | chr5.4:56196126-56196145 | MS.gene26078:intron | 45.0% |
| ! | TTCTTTGGAGGTTGTAGTGG+TGG | + | chr5.4:56196685-56196704 | MS.gene26078:CDS | 45.0% |
| ! | TTTTCCAATGCATGAAGGCG+AGG | + | chr5.4:56195386-56195405 | MS.gene26078:CDS | 45.0% |
| !! | GTAAACTCCAATGGACTGAG+CGG | + | chr5.4:56195739-56195758 | MS.gene26078:CDS | 45.0% |
| !! | TGATGGGTTGAAAAGTGAGG+CGG | + | chr5.4:56194947-56194966 | MS.gene26078:CDS | 45.0% |
| !! | AAATTTAAAAATTTCAAATT+AGG | - | chr5.4:56196797-56196816 | None:intergenic | 5.0% |
| !!! | TAAATTTTATCATTAAAATT+AGG | + | chr5.4:56196372-56196391 | MS.gene26078:intron | 5.0% |
| AAATGCCTCAAGGCAGCGTT+TGG | + | chr5.4:56196492-56196511 | MS.gene26078:CDS | 50.0% | |
| AATGCATGAAGGCGAGGAAG+TGG | + | chr5.4:56195392-56195411 | MS.gene26078:CDS | 50.0% | |
| ACGTGTTGGACCATAGGAAG+AGG | + | chr5.4:56196434-56196453 | MS.gene26078:CDS | 50.0% | |
| ACTTCCTCGCCTTCATGCAT+TGG | - | chr5.4:56195393-56195412 | None:intergenic | 50.0% | |
| AGGTGGGATGCAAGTAGCTT+GGG | + | chr5.4:56193853-56193872 | MS.gene26078:CDS | 50.0% | |
| ATGCATGAAGGCGAGGAAGT+GGG | + | chr5.4:56195393-56195412 | MS.gene26078:CDS | 50.0% | |
| ATGTCCAGTGGTCTTCGAAC+TGG | - | chr5.4:56196411-56196430 | None:intergenic | 50.0% | |
| CACTCCTACAACTAAGTCCC+GGG | - | chr5.4:56198181-56198200 | None:intergenic | 50.0% | |
| CATTCCCGGGACTTAGTTGT+AGG | + | chr5.4:56198174-56198193 | MS.gene26078:intron | 50.0% | |
| CCAACACGTAACATGTCCAG+TGG | - | chr5.4:56196423-56196442 | None:intergenic | 50.0% | |
| CCACTGGACATGTTACGTGT+TGG | + | chr5.4:56196420-56196439 | MS.gene26078:CDS | 50.0% | |
| CTACGTTGTCCCCTTCTTGA+AGG | - | chr5.4:56194056-56194075 | None:intergenic | 50.0% | |
| GCAAAACGTGGGTCAAACGT+CGG | - | chr5.4:56197462-56197481 | None:intergenic | 50.0% | |
| GCGGGGTTTACGCTTATGTT+TGG | + | chr5.4:56196221-56196240 | MS.gene26078:intron | 50.0% | |
| GCTGAAGGTCCTTCAAGAAG+GGG | + | chr5.4:56194044-56194063 | MS.gene26078:CDS | 50.0% | |
| GGGACTTAGTTGTAGGAGTG+TGG | + | chr5.4:56198181-56198200 | MS.gene26078:intron | 50.0% | |
| GGGATGGTGAAGCAAAATGG+GGG | + | chr5.4:56196863-56196882 | MS.gene26078:CDS | 50.0% | |
| GTAGATGAGTTGCGTGTTGC+CGG | + | chr5.4:56195358-56195377 | MS.gene26078:CDS | 50.0% | |
| TAGAGTAGGCGTTAGGACTG+TGG | + | chr5.4:56193879-56193898 | MS.gene26078:CDS | 50.0% | |
| TAGATGAGTTGCGTGTTGCC+GGG | + | chr5.4:56195359-56195378 | MS.gene26078:CDS | 50.0% | |
| TAGGTGGGATGCAAGTAGCT+TGG | + | chr5.4:56193852-56193871 | MS.gene26078:CDS | 50.0% | |
| TATTAGGCAGAGTCGTCGCA+AGG | - | chr5.4:56196286-56196305 | None:intergenic | 50.0% | |
| TCAAGTGTCTTGGTCCAACG+AGG | - | chr5.4:56195783-56195802 | None:intergenic | 50.0% | |
| TCGTTGGACCAAGACACTTG+AGG | + | chr5.4:56195782-56195801 | MS.gene26078:CDS | 50.0% | |
| TGTCCAGTGGTCTTCGAACT+GGG | - | chr5.4:56196410-56196429 | None:intergenic | 50.0% | |
| TTCCCGGGTTTCAATCCTTG+AGG | + | chr5.4:56194797-56194816 | MS.gene26078:CDS | 50.0% | |
| TTCCTGGGAAAGCTAATCCC+AGG | + | chr5.4:56198050-56198069 | MS.gene26078:intron | 50.0% | |
| ! | ACACCGACTAGAACTCAGGA+AGG | + | chr5.4:56197862-56197881 | MS.gene26078:intron | 50.0% |
| ! | AGGCAGTGGATTTGGCATTG+TGG | + | chr5.4:56196134-56196153 | MS.gene26078:intron | 50.0% |
| ! | ATCCACACCGACTAGAACTC+AGG | + | chr5.4:56197858-56197877 | MS.gene26078:intron | 50.0% |
| ! | GAGAACCTGGTTTGTCTAGC+AGG | + | chr5.4:56197825-56197844 | MS.gene26078:intron | 50.0% |
| ! | GGTTCCCAGGAATCTAAGGT+TGG | + | chr5.4:56197347-56197366 | MS.gene26078:intron | 50.0% |
| ! | TTCCTGAGTTCTAGTCGGTG+TGG | - | chr5.4:56197863-56197882 | None:intergenic | 50.0% |
| !! | GATGGGTTGAAAAGTGAGGC+GGG | + | chr5.4:56194948-56194967 | MS.gene26078:CDS | 50.0% |
| !! | GGAGGAGTGTGCCGTATTTT+TGG | + | chr5.4:56197229-56197248 | MS.gene26078:intron | 50.0% |
| !! | TACCTGGGATTAGCTTTCCC+AGG | - | chr5.4:56198055-56198074 | None:intergenic | 50.0% |
| !!! | AGTCCGTTTTGAAGGGGTAG+TGG | + | chr5.4:56196616-56196635 | MS.gene26078:CDS | 50.0% |
| AGATGAGTTGCGTGTTGCCG+GGG | + | chr5.4:56195360-56195379 | MS.gene26078:CDS | 55.0% | |
| CAACCCAGTTCGAAGACCAC+TGG | + | chr5.4:56196404-56196423 | MS.gene26078:CDS | 55.0% | |
| CAGTGGTCTTCGAACTGGGT+TGG | - | chr5.4:56196406-56196425 | None:intergenic | 55.0% | |
| ! | GTATTAGTTCGGTGGGGGGT+TGG | + | chr5.4:56196180-56196199 | MS.gene26078:intron | 55.0% |
| !! | CCAAGACACTTGAGGCGTTG+CGG | + | chr5.4:56195790-56195809 | MS.gene26078:CDS | 55.0% |
| CCGCAACGCCTCAAGTGTCT+TGG | - | chr5.4:56195793-56195812 | None:intergenic | 60.0% | |
| TGGTTGCCCAGCCGTATTGC+AGG | + | chr5.4:56194296-56194315 | MS.gene26078:CDS | 60.0% | |
| !!! | GGTGGGGGGTTGGTTTTGTG+TGG | + | chr5.4:56196190-56196209 | MS.gene26078:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 56193559 | 56198542 | 56193559 | ID=MS.gene26078 |
| chr5.4 | mRNA | 56193559 | 56198542 | 56193559 | ID=MS.gene26078.t1;Parent=MS.gene26078 |
| chr5.4 | exon | 56193559 | 56193597 | 56193559 | ID=MS.gene26078.t1.exon1;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56193559 | 56193597 | 56193559 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56193688 | 56194317 | 56193688 | ID=MS.gene26078.t1.exon2;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56193688 | 56194317 | 56193688 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56194409 | 56194531 | 56194409 | ID=MS.gene26078.t1.exon3;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56194409 | 56194531 | 56194409 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56194630 | 56195237 | 56194630 | ID=MS.gene26078.t1.exon4;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56194630 | 56195237 | 56194630 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56195345 | 56195426 | 56195345 | ID=MS.gene26078.t1.exon5;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56195345 | 56195426 | 56195345 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56195520 | 56195609 | 56195520 | ID=MS.gene26078.t1.exon6;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56195520 | 56195609 | 56195520 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56195699 | 56195824 | 56195699 | ID=MS.gene26078.t1.exon7;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56195699 | 56195824 | 56195699 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56195904 | 56195918 | 56195904 | ID=MS.gene26078.t1.exon8;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56195904 | 56195918 | 56195904 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56196394 | 56196525 | 56196394 | ID=MS.gene26078.t1.exon9;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56196394 | 56196525 | 56196394 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56196614 | 56196729 | 56196614 | ID=MS.gene26078.t1.exon10;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56196614 | 56196729 | 56196614 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56196822 | 56196912 | 56196822 | ID=MS.gene26078.t1.exon11;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56196822 | 56196912 | 56196822 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| chr5.4 | exon | 56198423 | 56198542 | 56198423 | ID=MS.gene26078.t1.exon12;Parent=MS.gene26078.t1 |
| chr5.4 | CDS | 56198423 | 56198542 | 56198423 | ID=cds.MS.gene26078.t1;Parent=MS.gene26078.t1 |
| Gene Sequence |
| Protein sequence |
