Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26221.t1 | XP_004490745.1 | 76.1 | 259 | 55 | 3 | 1 | 258 | 1 | 253 | 3.60E-99 | 371.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26221.t1 | Q8LD98 | 47.2 | 265 | 120 | 3 | 1 | 258 | 1 | 252 | 7.9e-55 | 215.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26221.t1 | A0A1S2XMW5 | 76.1 | 259 | 55 | 3 | 1 | 258 | 1 | 253 | 2.6e-99 | 371.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058630 | MS.gene26221 | 0.801882 | 7.30E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26221.t1 | MTR_5g076170 | 95.057 | 263 | 8 | 1 | 1 | 258 | 1 | 263 | 0.0 | 500 |
| MS.gene26221.t1 | MTR_3g063310 | 62.791 | 258 | 89 | 3 | 1 | 258 | 2 | 252 | 1.49e-100 | 293 |
| MS.gene26221.t1 | MTR_1g077560 | 48.846 | 260 | 121 | 7 | 1 | 258 | 1 | 250 | 3.06e-69 | 214 |
| MS.gene26221.t1 | MTR_5g087760 | 38.424 | 203 | 118 | 3 | 59 | 258 | 56 | 254 | 3.08e-43 | 147 |
| MS.gene26221.t1 | MTR_3g078800 | 37.566 | 189 | 109 | 4 | 74 | 258 | 69 | 252 | 5.05e-35 | 126 |
| MS.gene26221.t1 | MTR_2g012550 | 35.751 | 193 | 119 | 3 | 69 | 258 | 74 | 264 | 1.21e-32 | 120 |
| MS.gene26221.t1 | MTR_2g011350 | 32.515 | 163 | 103 | 3 | 86 | 245 | 35 | 193 | 4.42e-22 | 90.9 |
| MS.gene26221.t1 | MTR_3g078820 | 33.113 | 151 | 94 | 3 | 93 | 240 | 44 | 190 | 6.25e-21 | 88.2 |
| MS.gene26221.t1 | MTR_3g074150 | 26.840 | 231 | 146 | 8 | 19 | 243 | 19 | 232 | 3.26e-19 | 84.3 |
| MS.gene26221.t1 | MTR_2g100060 | 34.545 | 165 | 104 | 3 | 70 | 232 | 60 | 222 | 9.03e-19 | 83.2 |
| MS.gene26221.t1 | MTR_3g078810 | 37.795 | 127 | 76 | 3 | 121 | 245 | 9 | 134 | 1.34e-18 | 80.1 |
| MS.gene26221.t1 | MTR_7g106000 | 31.250 | 192 | 118 | 6 | 54 | 236 | 20 | 206 | 3.03e-18 | 81.3 |
| MS.gene26221.t1 | MTR_2g090225 | 30.435 | 161 | 109 | 3 | 99 | 258 | 62 | 220 | 6.83e-18 | 80.1 |
| MS.gene26221.t1 | MTR_3g104460 | 27.363 | 201 | 133 | 5 | 67 | 258 | 57 | 253 | 1.23e-17 | 80.1 |
| MS.gene26221.t1 | MTR_1g057400 | 29.412 | 187 | 123 | 5 | 57 | 236 | 3 | 187 | 2.33e-17 | 78.6 |
| MS.gene26221.t1 | MTR_6g071410 | 31.847 | 157 | 95 | 4 | 68 | 217 | 2 | 153 | 3.37e-17 | 78.2 |
| MS.gene26221.t1 | MTR_6g070890 | 31.847 | 157 | 95 | 4 | 68 | 217 | 2 | 153 | 3.37e-17 | 78.2 |
| MS.gene26221.t1 | MTR_6g070900 | 34.395 | 157 | 91 | 7 | 68 | 217 | 2 | 153 | 4.05e-17 | 77.8 |
| MS.gene26221.t1 | MTR_6g071400 | 34.395 | 157 | 91 | 7 | 68 | 217 | 2 | 153 | 4.05e-17 | 77.8 |
| MS.gene26221.t1 | MTR_1g057270 | 27.746 | 173 | 115 | 5 | 92 | 257 | 74 | 243 | 1.55e-16 | 77.0 |
| MS.gene26221.t1 | MTR_7g105970 | 26.943 | 193 | 134 | 4 | 65 | 252 | 32 | 222 | 3.03e-16 | 75.9 |
| MS.gene26221.t1 | MTR_4g119428 | 32.979 | 188 | 114 | 7 | 65 | 244 | 41 | 224 | 6.18e-16 | 75.5 |
| MS.gene26221.t1 | MTR_2g086790 | 25.641 | 195 | 132 | 2 | 75 | 256 | 19 | 213 | 8.11e-16 | 74.7 |
| MS.gene26221.t1 | MTR_7g106050 | 29.379 | 177 | 124 | 1 | 76 | 252 | 22 | 197 | 1.18e-15 | 73.9 |
| MS.gene26221.t1 | MTR_6g471090 | 32.450 | 151 | 91 | 5 | 68 | 217 | 11 | 151 | 8.39e-15 | 71.6 |
| MS.gene26221.t1 | MTR_7g106120 | 33.065 | 124 | 76 | 3 | 61 | 178 | 4 | 126 | 7.39e-14 | 68.9 |
| MS.gene26221.t1 | MTR_8g016370 | 28.571 | 196 | 110 | 5 | 42 | 232 | 25 | 195 | 7.65e-14 | 69.3 |
| MS.gene26221.t1 | MTR_4g051880 | 30.769 | 169 | 106 | 4 | 98 | 256 | 44 | 211 | 8.42e-14 | 68.9 |
| MS.gene26221.t1 | MTR_7g106010 | 29.767 | 215 | 129 | 9 | 57 | 256 | 20 | 227 | 8.58e-14 | 68.9 |
| MS.gene26221.t1 | MTR_7g106030 | 28.571 | 203 | 134 | 7 | 50 | 244 | 16 | 215 | 4.11e-13 | 67.4 |
| MS.gene26221.t1 | MTR_8g090320 | 25.888 | 197 | 123 | 6 | 64 | 255 | 79 | 257 | 1.83e-11 | 63.2 |
| MS.gene26221.t1 | MTR_7g105870 | 32.335 | 167 | 110 | 3 | 72 | 236 | 40 | 205 | 6.18e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26221.t1 | AT1G65690 | 52.453 | 265 | 106 | 3 | 1 | 258 | 1 | 252 | 2.00e-91 | 270 |
| MS.gene26221.t1 | AT5G36970 | 52.490 | 261 | 108 | 5 | 1 | 258 | 1 | 248 | 3.93e-88 | 262 |
| MS.gene26221.t1 | AT1G54540 | 45.349 | 258 | 122 | 3 | 1 | 258 | 1 | 239 | 1.17e-63 | 199 |
| MS.gene26221.t1 | AT2G27080 | 37.500 | 192 | 116 | 3 | 62 | 252 | 65 | 253 | 4.14e-40 | 139 |
| MS.gene26221.t1 | AT2G27080 | 37.500 | 192 | 116 | 3 | 62 | 252 | 65 | 253 | 4.14e-40 | 139 |
| MS.gene26221.t1 | AT5G21130 | 28.649 | 185 | 132 | 0 | 62 | 246 | 86 | 270 | 1.37e-26 | 104 |
| MS.gene26221.t1 | AT3G11650 | 32.418 | 182 | 119 | 3 | 65 | 244 | 45 | 224 | 5.01e-24 | 97.1 |
| MS.gene26221.t1 | AT5G06320 | 34.940 | 166 | 101 | 5 | 75 | 236 | 48 | 210 | 2.42e-23 | 95.1 |
| MS.gene26221.t1 | AT2G35980 | 35.260 | 173 | 103 | 5 | 65 | 232 | 31 | 199 | 5.06e-23 | 94.4 |
| MS.gene26221.t1 | AT2G35460 | 30.723 | 166 | 108 | 4 | 75 | 236 | 54 | 216 | 3.33e-20 | 87.0 |
| MS.gene26221.t1 | AT5G22870 | 28.333 | 180 | 126 | 2 | 73 | 252 | 27 | 203 | 1.96e-17 | 78.6 |
| MS.gene26221.t1 | AT3G52470 | 29.609 | 179 | 123 | 3 | 77 | 254 | 22 | 198 | 1.99e-17 | 78.6 |
| MS.gene26221.t1 | AT4G09590 | 30.319 | 188 | 119 | 4 | 73 | 254 | 20 | 201 | 2.29e-16 | 75.9 |
| MS.gene26221.t1 | AT3G11660 | 26.087 | 184 | 134 | 1 | 75 | 256 | 18 | 201 | 4.11e-16 | 75.1 |
| MS.gene26221.t1 | AT2G35970 | 30.319 | 188 | 119 | 4 | 73 | 254 | 20 | 201 | 1.38e-15 | 73.9 |
| MS.gene26221.t1 | AT2G35960 | 29.070 | 172 | 110 | 4 | 89 | 254 | 35 | 200 | 4.53e-15 | 72.4 |
| MS.gene26221.t1 | AT2G22180 | 27.094 | 203 | 123 | 5 | 60 | 257 | 108 | 290 | 2.12e-14 | 71.6 |
| MS.gene26221.t1 | AT1G17620 | 25.521 | 192 | 119 | 4 | 59 | 232 | 43 | 228 | 1.51e-13 | 68.9 |
| MS.gene26221.t1 | AT3G44220 | 30.769 | 156 | 100 | 3 | 84 | 232 | 23 | 177 | 4.02e-13 | 67.0 |
| MS.gene26221.t1 | AT5G53730 | 27.389 | 157 | 106 | 3 | 85 | 236 | 37 | 190 | 2.03e-12 | 65.1 |
| MS.gene26221.t1 | AT5G06330 | 28.082 | 146 | 103 | 1 | 94 | 237 | 39 | 184 | 3.24e-12 | 64.3 |
| MS.gene26221.t1 | AT4G05220 | 25.238 | 210 | 128 | 8 | 48 | 236 | 5 | 206 | 9.10e-12 | 63.5 |
Find 44 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAACCCTGAAATTAATTT+TGG | 0.050421 | 5.4:+58248184 | None:intergenic |
| AGTTCATCGACCGAGTATTT+TGG | 0.182422 | 5.4:+58248551 | None:intergenic |
| CTAATAATTCTATTAGAATT+AGG | 0.234955 | 5.4:-58248133 | MS.gene26221:CDS |
| GGAGCAGTAGTTGTAAATTT+AGG | 0.237234 | 5.4:-58248112 | MS.gene26221:CDS |
| TTGTGACCTTGATAGAATTT+AGG | 0.240879 | 5.4:+58248365 | None:intergenic |
| AGAAATCCAAACAAGAAAAT+TGG | 0.264628 | 5.4:-58248458 | MS.gene26221:CDS |
| AGCTTCCCAAAATTAATTTC+AGG | 0.289656 | 5.4:-58248190 | MS.gene26221:CDS |
| GGAGGACCATGTTGTTGTTC+AGG | 0.329559 | 5.4:+58248752 | None:intergenic |
| CCAAAATTAATTTCAGGGTT+AGG | 0.341912 | 5.4:-58248184 | MS.gene26221:CDS |
| TTTGATTGATTAATAGGAAT+AGG | 0.373477 | 5.4:+58248701 | None:intergenic |
| GGCAAAGTTTGTTGTGTACT+AGG | 0.373858 | 5.4:+58248722 | None:intergenic |
| TGTTTCACCTTCAATTTAAG+AGG | 0.405248 | 5.4:+58248242 | None:intergenic |
| GACATGTTTCTTGGTACTAA+AGG | 0.406371 | 5.4:+58248788 | None:intergenic |
| GTAGTTGTAAATTTAGGTTT+AGG | 0.411847 | 5.4:-58248106 | MS.gene26221:CDS |
| GTTGCTGCAAATTCTTCTGT+TGG | 0.423745 | 5.4:-58248655 | MS.gene26221:CDS |
| ATAGCACTTGGCATAACAAT+TGG | 0.433295 | 5.4:-58248605 | MS.gene26221:CDS |
| GTTCTTAGTATACCTTTGAC+AGG | 0.440681 | 5.4:-58248332 | MS.gene26221:CDS |
| GTTTGTTGTGTACTAGGAAA+AGG | 0.446325 | 5.4:+58248728 | None:intergenic |
| GCTTCCCAAAATTAATTTCA+GGG | 0.450968 | 5.4:-58248189 | MS.gene26221:CDS |
| TCTTTCAAACAACAACAGTT+TGG | 0.462291 | 5.4:-58248510 | MS.gene26221:CDS |
| TAGTGTTCCTCTTAAATTGA+AGG | 0.472711 | 5.4:-58248249 | MS.gene26221:CDS |
| GGACAAACACAGAATGCAAC+AGG | 0.474658 | 5.4:-58248311 | MS.gene26221:CDS |
| CAGGGTTAGGTGTACAATTG+TGG | 0.500348 | 5.4:-58248171 | MS.gene26221:CDS |
| AAAATTGGAATTGACTATAG+AGG | 0.508164 | 5.4:-58248443 | MS.gene26221:CDS |
| TTCTGTGTTTGTCCTGTCAA+AGG | 0.510330 | 5.4:+58248320 | None:intergenic |
| AGCCTGTGAGGATTAAGCTT+GGG | 0.514646 | 5.4:-58248220 | MS.gene26221:CDS |
| CTTGGTACTAAAGGTGCTGA+AGG | 0.518344 | 5.4:+58248797 | None:intergenic |
| TTCCCAAGCTTAATCCTCAC+AGG | 0.520897 | 5.4:+58248218 | None:intergenic |
| TGTTGTGTACTAGGAAAAGG+AGG | 0.521253 | 5.4:+58248731 | None:intergenic |
| TCATTACCTAAATTCTATCA+AGG | 0.551476 | 5.4:-58248371 | MS.gene26221:CDS |
| CAGCCTGTGAGGATTAAGCT+TGG | 0.560227 | 5.4:-58248221 | MS.gene26221:CDS |
| GTGGAAGTCACATAAGTGCT+TGG | 0.572955 | 5.4:-58248421 | MS.gene26221:CDS |
| CAGACACAAAATTATGTGAA+GGG | 0.588380 | 5.4:-58248394 | MS.gene26221:CDS |
| ACCAAAGATTCCAAAATACT+CGG | 0.589951 | 5.4:-58248561 | MS.gene26221:CDS |
| ATTGGAATTGACTATAGAGG+TGG | 0.594568 | 5.4:-58248440 | MS.gene26221:CDS |
| ACAGACACAAAATTATGTGA+AGG | 0.595482 | 5.4:-58248395 | MS.gene26221:CDS |
| GGTGCTGAAGGTTGTTGTTG+AGG | 0.603656 | 5.4:+58248809 | None:intergenic |
| CAGCAACAAGTTCAGTCAGA+GGG | 0.607080 | 5.4:-58248272 | MS.gene26221:CDS |
| GGTTAGGTGTACAATTGTGG+TGG | 0.630853 | 5.4:-58248168 | MS.gene26221:CDS |
| TGAAGGTGAAACAGCCTGTG+AGG | 0.645437 | 5.4:-58248232 | MS.gene26221:CDS |
| GCAGCAACAAGTTCAGTCAG+AGG | 0.650897 | 5.4:-58248273 | MS.gene26221:CDS |
| GGTGCTTCAACATCATGAAG+TGG | 0.676498 | 5.4:+58248830 | None:intergenic |
| TGTGTACTAGGAAAAGGAGG+AGG | 0.681120 | 5.4:+58248734 | None:intergenic |
| GATGATCCTGAACAACAACA+TGG | 0.735600 | 5.4:-58248758 | MS.gene26221:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATAATTCTATTAGAATT+AGG | - | chr5.4:58248821-58248840 | MS.gene26221:CDS | 15.0% |
| !! | TTTGATTGATTAATAGGAAT+AGG | + | chr5.4:58248256-58248275 | None:intergenic | 20.0% |
| ! | AAAATTGGAATTGACTATAG+AGG | - | chr5.4:58248511-58248530 | MS.gene26221:CDS | 25.0% |
| ! | AGAAATCCAAACAAGAAAAT+TGG | - | chr5.4:58248496-58248515 | MS.gene26221:CDS | 25.0% |
| ! | TCATTACCTAAATTCTATCA+AGG | - | chr5.4:58248583-58248602 | MS.gene26221:CDS | 25.0% |
| !! | CTAACCCTGAAATTAATTTT+GGG | + | chr5.4:58248772-58248791 | None:intergenic | 25.0% |
| !! | GTAGTTGTAAATTTAGGTTT+AGG | - | chr5.4:58248848-58248867 | MS.gene26221:CDS | 25.0% |
| !! | TCAATTCCAATTTTCTTGTT+TGG | + | chr5.4:58248505-58248524 | None:intergenic | 25.0% |
| !!! | ATATTTTTGATCATAGCACT+TGG | - | chr5.4:58248337-58248356 | MS.gene26221:CDS | 25.0% |
| ACAGACACAAAATTATGTGA+AGG | - | chr5.4:58248559-58248578 | MS.gene26221:CDS | 30.0% | |
| ACCAAAGATTCCAAAATACT+CGG | - | chr5.4:58248393-58248412 | MS.gene26221:CDS | 30.0% | |
| AGCTTCCCAAAATTAATTTC+AGG | - | chr5.4:58248764-58248783 | MS.gene26221:CDS | 30.0% | |
| CAGACACAAAATTATGTGAA+GGG | - | chr5.4:58248560-58248579 | MS.gene26221:CDS | 30.0% | |
| CCAAAATTAATTTCAGGGTT+AGG | - | chr5.4:58248770-58248789 | MS.gene26221:CDS | 30.0% | |
| GAATCTTTGGTCTAAAAACA+AGG | + | chr5.4:58248384-58248403 | None:intergenic | 30.0% | |
| GCTTCCCAAAATTAATTTCA+GGG | - | chr5.4:58248765-58248784 | MS.gene26221:CDS | 30.0% | |
| TAGTGTTCCTCTTAAATTGA+AGG | - | chr5.4:58248705-58248724 | MS.gene26221:CDS | 30.0% | |
| TCTTTCAAACAACAACAGTT+TGG | - | chr5.4:58248444-58248463 | MS.gene26221:CDS | 30.0% | |
| TGTTTCACCTTCAATTTAAG+AGG | + | chr5.4:58248715-58248734 | None:intergenic | 30.0% | |
| TTGTGACCTTGATAGAATTT+AGG | + | chr5.4:58248592-58248611 | None:intergenic | 30.0% | |
| ! | CCTAACCCTGAAATTAATTT+TGG | + | chr5.4:58248773-58248792 | None:intergenic | 30.0% |
| !! | TCAGATTTTGACATGTTTCT+TGG | + | chr5.4:58248178-58248197 | None:intergenic | 30.0% |
| !!! | GGTGGTTTTGATTGATTAAT+AGG | + | chr5.4:58248262-58248281 | None:intergenic | 30.0% |
| ATAGCACTTGGCATAACAAT+TGG | - | chr5.4:58248349-58248368 | MS.gene26221:CDS | 35.0% | |
| ATTGGAATTGACTATAGAGG+TGG | - | chr5.4:58248514-58248533 | MS.gene26221:CDS | 35.0% | |
| GACATGTTTCTTGGTACTAA+AGG | + | chr5.4:58248169-58248188 | None:intergenic | 35.0% | |
| GGAGCAGTAGTTGTAAATTT+AGG | - | chr5.4:58248842-58248861 | MS.gene26221:CDS | 35.0% | |
| GTTCTTAGTATACCTTTGAC+AGG | - | chr5.4:58248622-58248641 | MS.gene26221:CDS | 35.0% | |
| ! | CAACAGCTTCTTCTTTTCTT+TGG | + | chr5.4:58248283-58248302 | None:intergenic | 35.0% |
| !! | GTTTGTTGTGTACTAGGAAA+AGG | + | chr5.4:58248229-58248248 | None:intergenic | 35.0% |
| !!! | ACCGAGTATTTTGGAATCTT+TGG | + | chr5.4:58248397-58248416 | None:intergenic | 35.0% |
| GATGATCCTGAACAACAACA+TGG | - | chr5.4:58248196-58248215 | MS.gene26221:CDS | 40.0% | |
| GTTGCTGCAAATTCTTCTGT+TGG | - | chr5.4:58248299-58248318 | MS.gene26221:CDS | 40.0% | |
| TGTTGTGTACTAGGAAAAGG+AGG | + | chr5.4:58248226-58248245 | None:intergenic | 40.0% | |
| TTCTGTGTTTGTCCTGTCAA+AGG | + | chr5.4:58248637-58248656 | None:intergenic | 40.0% | |
| ! | AGTTCATCGACCGAGTATTT+TGG | + | chr5.4:58248406-58248425 | None:intergenic | 40.0% |
| ! | CAGCTTCTTCTTTTCTTTGG+TGG | + | chr5.4:58248280-58248299 | None:intergenic | 40.0% |
| !! | GGCAAAGTTTGTTGTGTACT+AGG | + | chr5.4:58248235-58248254 | None:intergenic | 40.0% |
| AGCCTGTGAGGATTAAGCTT+GGG | - | chr5.4:58248734-58248753 | MS.gene26221:CDS | 45.0% | |
| CAGCAACAAGTTCAGTCAGA+GGG | - | chr5.4:58248682-58248701 | MS.gene26221:CDS | 45.0% | |
| CAGGGTTAGGTGTACAATTG+TGG | - | chr5.4:58248783-58248802 | MS.gene26221:CDS | 45.0% | |
| GGACAAACACAGAATGCAAC+AGG | - | chr5.4:58248643-58248662 | MS.gene26221:CDS | 45.0% | |
| GGTGCTTCAACATCATGAAG+TGG | + | chr5.4:58248127-58248146 | None:intergenic | 45.0% | |
| GGTTAGGTGTACAATTGTGG+TGG | - | chr5.4:58248786-58248805 | MS.gene26221:CDS | 45.0% | |
| GTGGAAGTCACATAAGTGCT+TGG | - | chr5.4:58248533-58248552 | MS.gene26221:CDS | 45.0% | |
| TGTGTACTAGGAAAAGGAGG+AGG | + | chr5.4:58248223-58248242 | None:intergenic | 45.0% | |
| TTCCCAAGCTTAATCCTCAC+AGG | + | chr5.4:58248739-58248758 | None:intergenic | 45.0% | |
| !! | CTTGGTACTAAAGGTGCTGA+AGG | + | chr5.4:58248160-58248179 | None:intergenic | 45.0% |
| CAGCCTGTGAGGATTAAGCT+TGG | - | chr5.4:58248733-58248752 | MS.gene26221:CDS | 50.0% | |
| GCAGCAACAAGTTCAGTCAG+AGG | - | chr5.4:58248681-58248700 | MS.gene26221:CDS | 50.0% | |
| TGAAGGTGAAACAGCCTGTG+AGG | - | chr5.4:58248722-58248741 | MS.gene26221:CDS | 50.0% | |
| ! | GGAGGACCATGTTGTTGTTC+AGG | + | chr5.4:58248205-58248224 | None:intergenic | 50.0% |
| ! | GGTGCTGAAGGTTGTTGTTG+AGG | + | chr5.4:58248148-58248167 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 58248100 | 58248876 | 58248100 | ID=MS.gene26221 |
| chr5.4 | mRNA | 58248100 | 58248876 | 58248100 | ID=MS.gene26221.t1;Parent=MS.gene26221 |
| chr5.4 | exon | 58248100 | 58248876 | 58248100 | ID=MS.gene26221.t1.exon1;Parent=MS.gene26221.t1 |
| chr5.4 | CDS | 58248100 | 58248876 | 58248100 | ID=cds.MS.gene26221.t1;Parent=MS.gene26221.t1 |
| Gene Sequence |
| Protein sequence |
