Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26297.t1 | RHN56708.1 | 94.5 | 325 | 16 | 1 | 1 | 325 | 32 | 354 | 1.30E-175 | 625.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26297.t1 | P22195 | 56.0 | 309 | 130 | 4 | 16 | 323 | 13 | 316 | 2.1e-92 | 340.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26297.t1 | G7KFK3 | 94.5 | 325 | 16 | 1 | 1 | 325 | 1 | 323 | 9.6e-176 | 625.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056920 | MS.gene26297 | 0.80048 | 1.41E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26297.t1 | MTR_5g074710 | 94.462 | 325 | 16 | 1 | 1 | 325 | 1 | 323 | 0.0 | 635 |
MS.gene26297.t1 | MTR_5g074760 | 88.272 | 324 | 36 | 1 | 1 | 324 | 1 | 322 | 0.0 | 601 |
MS.gene26297.t1 | MTR_5g074740 | 88.000 | 325 | 37 | 1 | 1 | 325 | 1 | 323 | 0.0 | 599 |
MS.gene26297.t1 | MTR_5g074860 | 70.312 | 320 | 95 | 0 | 3 | 322 | 5 | 324 | 2.97e-170 | 476 |
MS.gene26297.t1 | MTR_3g467600 | 65.217 | 322 | 108 | 3 | 4 | 323 | 5 | 324 | 2.87e-149 | 422 |
MS.gene26297.t1 | MTR_5g074860 | 61.250 | 320 | 85 | 1 | 3 | 322 | 5 | 285 | 3.89e-139 | 395 |
MS.gene26297.t1 | MTR_4g029170 | 59.692 | 325 | 125 | 4 | 1 | 323 | 1 | 321 | 3.61e-133 | 382 |
MS.gene26297.t1 | MTR_5g074700 | 79.646 | 226 | 32 | 1 | 100 | 325 | 5 | 216 | 1.03e-130 | 371 |
MS.gene26297.t1 | MTR_4g029180 | 64.865 | 296 | 98 | 4 | 30 | 323 | 30 | 321 | 2.80e-130 | 374 |
MS.gene26297.t1 | MTR_5g074970 | 54.601 | 326 | 138 | 7 | 3 | 323 | 6 | 326 | 2.65e-118 | 344 |
MS.gene26297.t1 | MTR_5g083860 | 54.403 | 318 | 137 | 5 | 9 | 323 | 13 | 325 | 1.16e-115 | 337 |
MS.gene26297.t1 | MTR_3g466200 | 53.943 | 317 | 137 | 7 | 11 | 323 | 9 | 320 | 2.90e-113 | 331 |
MS.gene26297.t1 | MTR_3g072190 | 53.583 | 321 | 141 | 5 | 6 | 323 | 3 | 318 | 4.29e-113 | 330 |
MS.gene26297.t1 | MTR_3g094650 | 53.395 | 324 | 140 | 6 | 3 | 323 | 7 | 322 | 1.68e-112 | 329 |
MS.gene26297.t1 | MTR_2g084080 | 53.481 | 316 | 141 | 5 | 9 | 323 | 7 | 317 | 4.14e-112 | 328 |
MS.gene26297.t1 | MTR_2g084020 | 53.481 | 316 | 142 | 4 | 9 | 323 | 7 | 318 | 3.67e-111 | 325 |
MS.gene26297.t1 | MTR_2g084000 | 52.812 | 320 | 142 | 6 | 9 | 323 | 4 | 319 | 2.64e-109 | 321 |
MS.gene26297.t1 | MTR_2g084010 | 54.967 | 302 | 131 | 4 | 23 | 323 | 21 | 318 | 3.86e-109 | 320 |
MS.gene26297.t1 | MTR_2g084110 | 52.848 | 316 | 143 | 5 | 9 | 323 | 7 | 317 | 8.46e-109 | 320 |
MS.gene26297.t1 | MTR_3g094630 | 55.521 | 317 | 133 | 5 | 10 | 323 | 11 | 322 | 1.50e-108 | 319 |
MS.gene26297.t1 | MTR_4g029200 | 52.288 | 306 | 140 | 5 | 19 | 323 | 38 | 338 | 7.97e-108 | 318 |
MS.gene26297.t1 | MTR_3g094670 | 53.943 | 317 | 138 | 5 | 10 | 323 | 11 | 322 | 1.68e-107 | 317 |
MS.gene26297.t1 | MTR_1g115900 | 50.000 | 324 | 153 | 6 | 3 | 323 | 4 | 321 | 2.61e-107 | 316 |
MS.gene26297.t1 | MTR_2g084090 | 52.050 | 317 | 145 | 6 | 9 | 323 | 7 | 318 | 4.71e-106 | 313 |
MS.gene26297.t1 | MTR_7g072510 | 50.316 | 316 | 148 | 5 | 9 | 323 | 5 | 312 | 2.36e-105 | 310 |
MS.gene26297.t1 | MTR_3g466180 | 51.235 | 324 | 152 | 4 | 1 | 323 | 5 | 323 | 4.53e-104 | 308 |
MS.gene26297.t1 | MTR_7g072480 | 51.429 | 315 | 146 | 5 | 10 | 323 | 8 | 316 | 5.42e-103 | 305 |
MS.gene26297.t1 | MTR_4g083710 | 48.438 | 320 | 156 | 6 | 9 | 323 | 9 | 324 | 7.86e-101 | 300 |
MS.gene26297.t1 | MTR_7g026990 | 47.619 | 315 | 159 | 5 | 10 | 323 | 13 | 322 | 8.08e-100 | 297 |
MS.gene26297.t1 | MTR_5g021060 | 51.148 | 305 | 137 | 5 | 27 | 323 | 30 | 330 | 6.45e-99 | 295 |
MS.gene26297.t1 | MTR_4g029190 | 49.175 | 303 | 145 | 6 | 25 | 323 | 43 | 340 | 2.32e-98 | 294 |
MS.gene26297.t1 | MTR_8g076820 | 49.836 | 305 | 141 | 5 | 27 | 323 | 30 | 330 | 7.42e-96 | 287 |
MS.gene26297.t1 | MTR_4g074995 | 47.319 | 317 | 145 | 7 | 12 | 323 | 9 | 308 | 4.52e-94 | 282 |
MS.gene26297.t1 | MTR_2g029560 | 46.984 | 315 | 156 | 5 | 17 | 323 | 14 | 325 | 7.21e-94 | 283 |
MS.gene26297.t1 | MTR_4g125940 | 47.734 | 331 | 150 | 8 | 7 | 324 | 10 | 330 | 2.47e-91 | 275 |
MS.gene26297.t1 | MTR_2g028980 | 46.341 | 328 | 165 | 5 | 5 | 324 | 7 | 331 | 3.99e-91 | 276 |
MS.gene26297.t1 | MTR_7g093370 | 44.308 | 325 | 169 | 5 | 8 | 323 | 50 | 371 | 5.19e-91 | 276 |
MS.gene26297.t1 | MTR_2g029800 | 49.186 | 307 | 145 | 5 | 25 | 323 | 27 | 330 | 3.87e-90 | 273 |
MS.gene26297.t1 | MTR_1g022970 | 46.885 | 305 | 151 | 4 | 27 | 323 | 46 | 347 | 1.14e-89 | 272 |
MS.gene26297.t1 | MTR_3g072190 | 55.118 | 254 | 108 | 4 | 71 | 323 | 3 | 251 | 1.45e-89 | 268 |
MS.gene26297.t1 | MTR_1g054205 | 42.470 | 332 | 175 | 6 | 1 | 323 | 2 | 326 | 3.46e-88 | 267 |
MS.gene26297.t1 | MTR_2g040000 | 45.897 | 329 | 158 | 9 | 7 | 323 | 11 | 331 | 4.19e-88 | 267 |
MS.gene26297.t1 | MTR_2g029815 | 44.648 | 327 | 170 | 4 | 5 | 323 | 7 | 330 | 8.95e-87 | 265 |
MS.gene26297.t1 | MTR_4g122640 | 45.875 | 303 | 154 | 5 | 27 | 323 | 38 | 336 | 2.17e-86 | 263 |
MS.gene26297.t1 | MTR_5g017850 | 46.386 | 332 | 163 | 9 | 1 | 323 | 1 | 326 | 3.86e-86 | 262 |
MS.gene26297.t1 | MTR_5g049280 | 46.753 | 308 | 150 | 8 | 27 | 323 | 33 | 337 | 4.23e-86 | 262 |
MS.gene26297.t1 | MTR_2g029830 | 46.906 | 307 | 152 | 5 | 25 | 323 | 26 | 329 | 8.49e-86 | 262 |
MS.gene26297.t1 | MTR_4g030890 | 45.981 | 311 | 154 | 5 | 20 | 323 | 93 | 396 | 3.41e-85 | 263 |
MS.gene26297.t1 | MTR_2g029820 | 46.580 | 307 | 153 | 4 | 25 | 323 | 27 | 330 | 4.08e-85 | 260 |
MS.gene26297.t1 | MTR_2g029730 | 46.032 | 315 | 159 | 5 | 17 | 323 | 15 | 326 | 5.17e-85 | 260 |
MS.gene26297.t1 | MTR_4g031140 | 43.425 | 327 | 171 | 5 | 4 | 323 | 5 | 324 | 5.72e-85 | 259 |
MS.gene26297.t1 | MTR_5g017860 | 45.482 | 332 | 166 | 9 | 1 | 323 | 1 | 326 | 6.48e-85 | 259 |
MS.gene26297.t1 | MTR_5g014100 | 46.774 | 310 | 148 | 6 | 27 | 323 | 26 | 331 | 1.21e-84 | 258 |
MS.gene26297.t1 | MTR_4g074990 | 43.344 | 323 | 156 | 7 | 8 | 323 | 3 | 305 | 1.35e-84 | 258 |
MS.gene26297.t1 | MTR_4g125940 | 51.254 | 279 | 121 | 6 | 56 | 324 | 2 | 275 | 4.83e-84 | 255 |
MS.gene26297.t1 | MTR_2g029740 | 44.136 | 324 | 170 | 4 | 9 | 324 | 11 | 331 | 6.47e-84 | 257 |
MS.gene26297.t1 | MTR_2g029860 | 44.951 | 307 | 158 | 4 | 25 | 323 | 27 | 330 | 6.57e-84 | 257 |
MS.gene26297.t1 | MTR_2g029750 | 43.636 | 330 | 175 | 5 | 3 | 324 | 5 | 331 | 6.13e-82 | 252 |
MS.gene26297.t1 | MTR_1g101830 | 44.904 | 314 | 156 | 10 | 18 | 323 | 18 | 322 | 3.97e-80 | 246 |
MS.gene26297.t1 | MTR_2g029910 | 44.194 | 310 | 161 | 6 | 25 | 325 | 28 | 334 | 1.25e-79 | 246 |
MS.gene26297.t1 | MTR_4g074980 | 41.975 | 324 | 157 | 8 | 1 | 323 | 1 | 294 | 2.52e-78 | 241 |
MS.gene26297.t1 | MTR_2g029850 | 44.300 | 307 | 160 | 5 | 25 | 323 | 27 | 330 | 5.88e-77 | 239 |
MS.gene26297.t1 | MTR_1g077000 | 41.946 | 298 | 163 | 7 | 27 | 323 | 39 | 327 | 4.04e-75 | 234 |
MS.gene26297.t1 | MTR_3g092990 | 39.514 | 329 | 183 | 7 | 4 | 323 | 5 | 326 | 1.96e-74 | 232 |
MS.gene26297.t1 | MTR_1g086490 | 40.120 | 334 | 179 | 6 | 9 | 325 | 13 | 342 | 2.40e-73 | 230 |
MS.gene26297.t1 | MTR_1g086320 | 39.692 | 325 | 182 | 6 | 9 | 323 | 13 | 333 | 6.53e-73 | 228 |
MS.gene26297.t1 | MTR_1g038680 | 40.264 | 303 | 168 | 6 | 31 | 323 | 33 | 332 | 3.60e-71 | 224 |
MS.gene26297.t1 | MTR_0155s0040 | 39.667 | 300 | 171 | 7 | 25 | 323 | 25 | 315 | 6.08e-71 | 223 |
MS.gene26297.t1 | MTR_4g046713 | 39.144 | 327 | 184 | 8 | 6 | 323 | 6 | 326 | 2.91e-70 | 221 |
MS.gene26297.t1 | MTR_4g074980 | 44.574 | 258 | 133 | 6 | 1 | 253 | 1 | 253 | 4.58e-70 | 218 |
MS.gene26297.t1 | MTR_7g107520 | 41.033 | 329 | 175 | 8 | 4 | 323 | 2 | 320 | 8.18e-70 | 220 |
MS.gene26297.t1 | MTR_5g022870 | 41.411 | 326 | 163 | 10 | 13 | 323 | 4 | 316 | 1.24e-68 | 217 |
MS.gene26297.t1 | MTR_8g075100 | 41.883 | 308 | 156 | 9 | 26 | 323 | 25 | 319 | 6.35e-68 | 215 |
MS.gene26297.t1 | MTR_2g029830 | 46.718 | 259 | 127 | 5 | 73 | 323 | 6 | 261 | 1.52e-67 | 213 |
MS.gene26297.t1 | MTR_1g025980 | 40.683 | 322 | 169 | 9 | 9 | 322 | 10 | 317 | 4.49e-67 | 213 |
MS.gene26297.t1 | MTR_2g088770 | 38.253 | 332 | 187 | 10 | 1 | 323 | 3 | 325 | 9.20e-67 | 213 |
MS.gene26297.t1 | MTR_4g133800 | 37.971 | 345 | 175 | 12 | 7 | 325 | 4 | 335 | 1.72e-64 | 207 |
MS.gene26297.t1 | MTR_6g027440 | 37.188 | 320 | 188 | 7 | 9 | 323 | 3 | 314 | 1.12e-63 | 204 |
MS.gene26297.t1 | MTR_2g008710 | 38.369 | 331 | 178 | 11 | 8 | 323 | 6 | 325 | 3.10e-63 | 203 |
MS.gene26297.t1 | MTR_3g092990 | 37.386 | 329 | 179 | 8 | 4 | 323 | 5 | 315 | 5.50e-63 | 202 |
MS.gene26297.t1 | MTR_2g437770 | 40.683 | 322 | 160 | 11 | 18 | 323 | 35 | 341 | 3.84e-61 | 199 |
MS.gene26297.t1 | MTR_4g087965 | 40.065 | 307 | 166 | 9 | 26 | 319 | 41 | 342 | 1.59e-60 | 197 |
MS.gene26297.t1 | MTR_7g086820 | 37.582 | 306 | 175 | 8 | 25 | 324 | 18 | 313 | 4.94e-60 | 195 |
MS.gene26297.t1 | MTR_7g029030 | 38.291 | 316 | 184 | 7 | 13 | 323 | 11 | 320 | 1.08e-59 | 194 |
MS.gene26297.t1 | MTR_1g009750 | 37.612 | 335 | 184 | 11 | 3 | 323 | 5 | 328 | 3.23e-58 | 191 |
MS.gene26297.t1 | MTR_8g062780 | 36.170 | 329 | 195 | 6 | 7 | 325 | 3 | 326 | 3.25e-58 | 191 |
MS.gene26297.t1 | MTR_4g114210 | 36.778 | 329 | 180 | 10 | 8 | 323 | 7 | 320 | 7.04e-58 | 189 |
MS.gene26297.t1 | MTR_1g090760 | 34.043 | 329 | 201 | 7 | 8 | 325 | 9 | 332 | 7.64e-58 | 190 |
MS.gene26297.t1 | MTR_7g086870 | 36.545 | 301 | 180 | 8 | 25 | 323 | 20 | 311 | 4.67e-57 | 187 |
MS.gene26297.t1 | MTR_5g016010 | 36.970 | 330 | 185 | 11 | 6 | 319 | 3 | 325 | 3.77e-56 | 185 |
MS.gene26297.t1 | MTR_4g127670 | 39.550 | 311 | 163 | 10 | 27 | 323 | 24 | 323 | 4.17e-56 | 185 |
MS.gene26297.t1 | MTR_4g095450 | 37.700 | 313 | 182 | 7 | 14 | 319 | 14 | 320 | 7.92e-56 | 184 |
MS.gene26297.t1 | MTR_3g072210 | 46.818 | 220 | 110 | 5 | 106 | 323 | 24 | 238 | 1.91e-53 | 175 |
MS.gene26297.t1 | MTR_2g078610 | 35.207 | 338 | 173 | 9 | 25 | 322 | 74 | 405 | 4.12e-52 | 177 |
MS.gene26297.t1 | MTR_0286s0010 | 34.568 | 324 | 194 | 9 | 12 | 323 | 17 | 334 | 6.69e-52 | 174 |
MS.gene26297.t1 | MTR_6g008075 | 34.568 | 324 | 194 | 9 | 12 | 323 | 17 | 334 | 6.69e-52 | 174 |
MS.gene26297.t1 | MTR_2g008160 | 37.179 | 312 | 173 | 10 | 25 | 323 | 22 | 323 | 4.44e-51 | 172 |
MS.gene26297.t1 | MTR_2g077990 | 34.911 | 338 | 174 | 9 | 25 | 322 | 74 | 405 | 1.42e-50 | 173 |
MS.gene26297.t1 | MTR_6g043280 | 34.983 | 303 | 186 | 9 | 24 | 323 | 38 | 332 | 1.46e-50 | 171 |
MS.gene26297.t1 | MTR_2g067440 | 34.524 | 336 | 175 | 9 | 25 | 322 | 58 | 386 | 3.03e-50 | 171 |
MS.gene26297.t1 | MTR_1g066710 | 34.967 | 306 | 185 | 7 | 25 | 323 | 25 | 323 | 7.39e-50 | 169 |
MS.gene26297.t1 | MTR_2g099175 | 33.430 | 344 | 196 | 11 | 4 | 324 | 3 | 336 | 5.64e-49 | 167 |
MS.gene26297.t1 | MTR_3g105790 | 35.168 | 327 | 189 | 7 | 9 | 323 | 7 | 322 | 4.92e-48 | 164 |
MS.gene26297.t1 | MTR_2g078280 | 35.692 | 325 | 163 | 9 | 25 | 309 | 74 | 392 | 2.94e-47 | 164 |
MS.gene26297.t1 | MTR_1g066380 | 33.550 | 307 | 190 | 7 | 24 | 323 | 24 | 323 | 3.60e-47 | 162 |
MS.gene26297.t1 | MTR_6g043240 | 34.242 | 330 | 191 | 12 | 8 | 323 | 14 | 331 | 4.44e-47 | 162 |
MS.gene26297.t1 | MTR_4g132490 | 30.263 | 304 | 200 | 5 | 27 | 323 | 29 | 327 | 6.11e-47 | 161 |
MS.gene26297.t1 | MTR_1g066640 | 33.660 | 306 | 189 | 7 | 25 | 323 | 25 | 323 | 1.43e-46 | 160 |
MS.gene26297.t1 | MTR_1g009750 | 34.835 | 333 | 179 | 11 | 3 | 323 | 5 | 311 | 1.61e-46 | 160 |
MS.gene26297.t1 | MTR_6g043460 | 34.219 | 301 | 188 | 7 | 22 | 319 | 31 | 324 | 7.12e-46 | 159 |
MS.gene26297.t1 | MTR_2g008730 | 34.043 | 329 | 167 | 11 | 10 | 323 | 8 | 301 | 3.63e-45 | 156 |
MS.gene26297.t1 | MTR_3g072260 | 56.923 | 130 | 54 | 2 | 7 | 135 | 5 | 133 | 4.39e-44 | 148 |
MS.gene26297.t1 | MTR_1g066680 | 33.007 | 306 | 190 | 8 | 25 | 323 | 25 | 322 | 4.76e-44 | 154 |
MS.gene26297.t1 | MTR_5g033470 | 31.731 | 312 | 195 | 8 | 25 | 323 | 71 | 377 | 4.98e-44 | 155 |
MS.gene26297.t1 | MTR_7g072490 | 41.224 | 245 | 84 | 6 | 73 | 316 | 2 | 187 | 2.22e-43 | 148 |
MS.gene26297.t1 | MTR_4g132110 | 32.237 | 304 | 194 | 6 | 27 | 324 | 32 | 329 | 6.01e-42 | 148 |
MS.gene26297.t1 | MTR_0147s0010 | 30.864 | 324 | 177 | 8 | 27 | 322 | 77 | 381 | 1.29e-41 | 149 |
MS.gene26297.t1 | MTR_2g067450 | 33.438 | 320 | 172 | 10 | 25 | 322 | 9 | 309 | 4.75e-40 | 143 |
MS.gene26297.t1 | MTR_4g132110 | 31.715 | 309 | 194 | 7 | 27 | 324 | 32 | 334 | 1.48e-39 | 142 |
MS.gene26297.t1 | MTR_2g008160 | 32.895 | 304 | 162 | 9 | 25 | 323 | 22 | 288 | 1.03e-38 | 139 |
MS.gene26297.t1 | MTR_2g008160 | 42.373 | 177 | 95 | 5 | 25 | 201 | 22 | 191 | 1.06e-37 | 134 |
MS.gene26297.t1 | MTR_5g074770 | 64.045 | 89 | 32 | 0 | 234 | 322 | 20 | 108 | 1.39e-36 | 127 |
MS.gene26297.t1 | MTR_2g029880 | 39.594 | 197 | 103 | 3 | 136 | 325 | 3 | 190 | 1.90e-35 | 128 |
MS.gene26297.t1 | MTR_1g066380 | 31.923 | 260 | 163 | 7 | 71 | 323 | 3 | 255 | 2.22e-34 | 126 |
MS.gene26297.t1 | MTR_3g105790 | 36.364 | 242 | 135 | 6 | 94 | 323 | 12 | 246 | 1.69e-30 | 116 |
MS.gene26297.t1 | MTR_3g462850 | 41.135 | 141 | 72 | 5 | 194 | 323 | 9 | 149 | 2.58e-22 | 91.7 |
MS.gene26297.t1 | MTR_1g089005 | 41.667 | 120 | 62 | 3 | 27 | 140 | 15 | 132 | 2.80e-19 | 83.6 |
MS.gene26297.t1 | MTR_4g031040 | 34.911 | 169 | 71 | 3 | 86 | 254 | 1 | 130 | 1.18e-18 | 81.3 |
MS.gene26297.t1 | MTR_6g048160 | 52.055 | 73 | 30 | 3 | 66 | 138 | 22 | 89 | 1.01e-17 | 77.4 |
MS.gene26297.t1 | MTR_4g114220 | 36.134 | 119 | 63 | 4 | 53 | 169 | 29 | 136 | 4.08e-17 | 77.4 |
MS.gene26297.t1 | MTR_3g086710 | 59.322 | 59 | 24 | 0 | 14 | 72 | 6 | 64 | 9.80e-17 | 74.7 |
MS.gene26297.t1 | MTR_5g058120 | 31.677 | 161 | 101 | 3 | 161 | 319 | 2 | 155 | 2.50e-15 | 75.1 |
MS.gene26297.t1 | MTR_2g029930 | 40.217 | 92 | 30 | 2 | 25 | 105 | 17 | 94 | 1.34e-14 | 69.3 |
MS.gene26297.t1 | MTR_7g086790 | 33.333 | 123 | 75 | 4 | 74 | 196 | 17 | 132 | 5.52e-14 | 70.1 |
MS.gene26297.t1 | MTR_4g073410 | 29.070 | 258 | 121 | 12 | 61 | 305 | 35 | 243 | 3.22e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26297.t1 | AT5G05340 | 54.967 | 302 | 128 | 5 | 25 | 323 | 28 | 324 | 9.49e-114 | 332 |
MS.gene26297.t1 | AT2G18150 | 46.608 | 339 | 159 | 6 | 3 | 323 | 2 | 336 | 1.52e-101 | 302 |
MS.gene26297.t1 | AT1G14550 | 49.226 | 323 | 157 | 6 | 4 | 323 | 3 | 321 | 1.67e-100 | 298 |
MS.gene26297.t1 | AT5G58390 | 51.887 | 318 | 144 | 6 | 10 | 323 | 4 | 316 | 1.87e-99 | 296 |
MS.gene26297.t1 | AT5G58400 | 48.148 | 324 | 156 | 7 | 4 | 323 | 10 | 325 | 6.84e-99 | 295 |
MS.gene26297.t1 | AT2G18140 | 46.746 | 338 | 159 | 6 | 3 | 323 | 2 | 335 | 2.74e-98 | 293 |
MS.gene26297.t1 | AT4G36430 | 49.836 | 305 | 141 | 5 | 27 | 323 | 30 | 330 | 4.00e-96 | 288 |
MS.gene26297.t1 | AT5G66390 | 49.346 | 306 | 143 | 5 | 27 | 324 | 33 | 334 | 9.42e-96 | 287 |
MS.gene26297.t1 | AT1G14540 | 46.708 | 319 | 162 | 6 | 9 | 323 | 1 | 315 | 1.45e-95 | 286 |
MS.gene26297.t1 | AT1G44970 | 49.511 | 307 | 144 | 5 | 25 | 323 | 43 | 346 | 9.78e-95 | 285 |
MS.gene26297.t1 | AT5G06720 | 44.136 | 324 | 170 | 4 | 8 | 323 | 13 | 333 | 7.46e-93 | 280 |
MS.gene26297.t1 | AT3G50990 | 46.795 | 312 | 154 | 5 | 21 | 324 | 35 | 342 | 3.42e-92 | 278 |
MS.gene26297.t1 | AT5G06730 | 42.769 | 325 | 175 | 4 | 7 | 323 | 13 | 334 | 5.09e-89 | 271 |
MS.gene26297.t1 | AT4G08770 | 46.602 | 309 | 152 | 6 | 25 | 323 | 22 | 327 | 9.07e-87 | 265 |
MS.gene26297.t1 | AT5G19890 | 45.427 | 328 | 158 | 10 | 8 | 324 | 11 | 328 | 3.35e-86 | 262 |
MS.gene26297.t1 | AT2G38390 | 46.753 | 308 | 152 | 5 | 25 | 323 | 29 | 333 | 6.93e-86 | 262 |
MS.gene26297.t1 | AT4G16270 | 47.508 | 301 | 142 | 7 | 32 | 323 | 55 | 348 | 1.88e-85 | 261 |
MS.gene26297.t1 | AT3G32980 | 46.278 | 309 | 153 | 6 | 25 | 323 | 29 | 334 | 3.62e-85 | 261 |
MS.gene26297.t1 | AT3G49120 | 45.367 | 313 | 158 | 6 | 21 | 323 | 26 | 335 | 2.57e-84 | 258 |
MS.gene26297.t1 | AT2G38380 | 46.429 | 308 | 153 | 5 | 25 | 323 | 29 | 333 | 4.75e-84 | 258 |
MS.gene26297.t1 | AT3G49110 | 45.631 | 309 | 155 | 6 | 25 | 323 | 31 | 336 | 1.09e-83 | 257 |
MS.gene26297.t1 | AT4G08780 | 45.631 | 309 | 155 | 6 | 25 | 323 | 22 | 327 | 1.12e-83 | 256 |
MS.gene26297.t1 | AT1G49570 | 46.254 | 307 | 149 | 8 | 24 | 319 | 45 | 346 | 1.06e-82 | 254 |
MS.gene26297.t1 | AT1G68850 | 44.337 | 309 | 157 | 8 | 27 | 323 | 30 | 335 | 2.63e-82 | 253 |
MS.gene26297.t1 | AT5G51890 | 44.615 | 325 | 160 | 11 | 10 | 323 | 7 | 322 | 1.89e-81 | 250 |
MS.gene26297.t1 | AT2G35380 | 43.243 | 333 | 172 | 6 | 4 | 323 | 7 | 335 | 4.21e-81 | 249 |
MS.gene26297.t1 | AT2G22420 | 40.615 | 325 | 175 | 8 | 8 | 324 | 6 | 320 | 1.71e-79 | 245 |
MS.gene26297.t1 | AT1G71695 | 43.506 | 308 | 163 | 7 | 21 | 323 | 38 | 339 | 9.12e-78 | 242 |
MS.gene26297.t1 | AT3G01190 | 43.421 | 304 | 157 | 7 | 27 | 323 | 26 | 321 | 2.39e-75 | 234 |
MS.gene26297.t1 | AT5G19880 | 42.249 | 329 | 168 | 8 | 9 | 323 | 9 | 329 | 1.10e-74 | 233 |
MS.gene26297.t1 | AT5G15180 | 41.796 | 323 | 175 | 6 | 8 | 323 | 13 | 329 | 8.97e-74 | 231 |
MS.gene26297.t1 | AT1G05240 | 43.333 | 300 | 153 | 7 | 30 | 319 | 29 | 321 | 1.32e-73 | 230 |
MS.gene26297.t1 | AT1G05250 | 43.333 | 300 | 153 | 7 | 30 | 319 | 29 | 321 | 1.32e-73 | 230 |
MS.gene26297.t1 | AT5G42180 | 43.168 | 322 | 159 | 11 | 9 | 322 | 11 | 316 | 1.19e-72 | 227 |
MS.gene26297.t1 | AT4G33420 | 40.604 | 298 | 167 | 7 | 27 | 323 | 37 | 325 | 1.07e-68 | 218 |
MS.gene26297.t1 | AT4G33420 | 40.604 | 298 | 167 | 7 | 27 | 323 | 84 | 372 | 6.22e-68 | 217 |
MS.gene26297.t1 | AT3G03670 | 36.556 | 331 | 188 | 9 | 4 | 323 | 2 | 321 | 2.46e-67 | 214 |
MS.gene26297.t1 | AT4G11290 | 38.066 | 331 | 185 | 10 | 6 | 323 | 3 | 326 | 7.28e-67 | 213 |
MS.gene26297.t1 | AT5G64120 | 40.373 | 322 | 175 | 8 | 9 | 323 | 17 | 328 | 1.04e-66 | 213 |
MS.gene26297.t1 | AT1G05260 | 38.095 | 315 | 180 | 8 | 19 | 324 | 18 | 326 | 5.01e-66 | 211 |
MS.gene26297.t1 | AT3G21770 | 39.355 | 310 | 173 | 8 | 19 | 319 | 21 | 324 | 8.32e-65 | 207 |
MS.gene26297.t1 | AT5G17820 | 36.474 | 329 | 181 | 10 | 3 | 323 | 5 | 313 | 1.32e-61 | 199 |
MS.gene26297.t1 | AT2G41480 | 37.462 | 331 | 182 | 10 | 8 | 323 | 8 | 328 | 3.03e-61 | 198 |
MS.gene26297.t1 | AT5G40150 | 37.261 | 314 | 187 | 6 | 15 | 323 | 20 | 328 | 1.09e-60 | 197 |
MS.gene26297.t1 | AT5G17820 | 37.785 | 307 | 168 | 9 | 25 | 323 | 75 | 366 | 1.22e-60 | 198 |
MS.gene26297.t1 | AT4G17690 | 38.535 | 314 | 181 | 7 | 18 | 325 | 17 | 324 | 4.78e-60 | 195 |
MS.gene26297.t1 | AT5G64100 | 36.391 | 338 | 183 | 10 | 7 | 323 | 5 | 331 | 1.47e-59 | 194 |
MS.gene26297.t1 | AT3G28200 | 37.294 | 303 | 181 | 6 | 25 | 323 | 19 | 316 | 1.54e-59 | 194 |
MS.gene26297.t1 | AT1G30870 | 40.260 | 308 | 160 | 11 | 27 | 323 | 51 | 345 | 2.06e-59 | 194 |
MS.gene26297.t1 | AT5G47000 | 36.503 | 326 | 193 | 8 | 8 | 325 | 13 | 332 | 4.53e-58 | 190 |
MS.gene26297.t1 | AT4G26010 | 35.737 | 319 | 186 | 10 | 7 | 323 | 8 | 309 | 7.31e-58 | 189 |
MS.gene26297.t1 | AT4G26010 | 36.808 | 307 | 180 | 10 | 20 | 323 | 42 | 337 | 1.51e-57 | 189 |
MS.gene26297.t1 | AT1G24110 | 36.562 | 320 | 185 | 8 | 16 | 323 | 9 | 322 | 5.99e-57 | 187 |
MS.gene26297.t1 | AT5G22410 | 34.551 | 301 | 176 | 9 | 31 | 320 | 32 | 322 | 8.31e-57 | 187 |
MS.gene26297.t1 | AT5G39580 | 39.203 | 301 | 165 | 9 | 31 | 323 | 29 | 319 | 1.20e-56 | 186 |
MS.gene26297.t1 | AT2G35380 | 44.400 | 250 | 122 | 6 | 87 | 323 | 2 | 247 | 4.26e-56 | 182 |
MS.gene26297.t1 | AT5G64110 | 38.671 | 331 | 178 | 11 | 7 | 323 | 11 | 330 | 5.92e-56 | 185 |
MS.gene26297.t1 | AT4G37530 | 37.580 | 314 | 172 | 7 | 25 | 323 | 25 | 329 | 3.60e-55 | 183 |
MS.gene26297.t1 | AT1G34510 | 34.891 | 321 | 188 | 10 | 9 | 323 | 4 | 309 | 1.81e-54 | 180 |
MS.gene26297.t1 | AT2G39040 | 38.658 | 313 | 172 | 9 | 25 | 323 | 44 | 350 | 4.78e-54 | 181 |
MS.gene26297.t1 | AT2G18980 | 36.012 | 336 | 189 | 11 | 1 | 323 | 1 | 323 | 8.26e-54 | 179 |
MS.gene26297.t1 | AT4G25980 | 34.835 | 333 | 195 | 9 | 2 | 323 | 5 | 326 | 1.54e-53 | 178 |
MS.gene26297.t1 | AT2G34060 | 34.897 | 341 | 193 | 11 | 3 | 320 | 9 | 343 | 2.71e-53 | 178 |
MS.gene26297.t1 | AT4G33870 | 33.234 | 337 | 174 | 9 | 30 | 322 | 71 | 400 | 3.48e-53 | 180 |
MS.gene26297.t1 | AT5G67400 | 37.273 | 330 | 185 | 10 | 9 | 323 | 7 | 329 | 3.76e-53 | 177 |
MS.gene26297.t1 | AT4G30170 | 37.621 | 311 | 172 | 10 | 25 | 323 | 25 | 325 | 9.24e-53 | 176 |
MS.gene26297.t1 | AT1G77100 | 36.970 | 330 | 185 | 12 | 5 | 323 | 2 | 319 | 1.78e-52 | 176 |
MS.gene26297.t1 | AT3G49960 | 36.556 | 331 | 186 | 11 | 10 | 323 | 6 | 329 | 8.95e-52 | 174 |
MS.gene26297.t1 | AT4G31760 | 33.333 | 330 | 201 | 7 | 4 | 323 | 6 | 326 | 9.22e-51 | 171 |
MS.gene26297.t1 | AT2G24800 | 35.577 | 312 | 179 | 7 | 24 | 323 | 28 | 329 | 2.03e-50 | 170 |
MS.gene26297.t1 | AT4G37520 | 35.032 | 314 | 180 | 7 | 25 | 323 | 25 | 329 | 9.43e-50 | 169 |
MS.gene26297.t1 | AT4G37520 | 34.713 | 314 | 178 | 8 | 25 | 323 | 25 | 326 | 7.78e-48 | 164 |
MS.gene26297.t1 | AT5G14130 | 33.962 | 318 | 188 | 8 | 18 | 323 | 23 | 330 | 1.25e-47 | 163 |
MS.gene26297.t1 | AT5G14130 | 33.962 | 318 | 188 | 8 | 18 | 323 | 64 | 371 | 3.14e-47 | 163 |
MS.gene26297.t1 | AT4G37530 | 38.314 | 261 | 139 | 6 | 25 | 270 | 25 | 278 | 4.72e-47 | 160 |
MS.gene26297.t1 | AT5G24070 | 34.154 | 325 | 187 | 11 | 14 | 323 | 23 | 335 | 1.48e-46 | 160 |
MS.gene26297.t1 | AT3G17070 | 32.362 | 309 | 190 | 8 | 27 | 323 | 38 | 339 | 1.26e-45 | 158 |
MS.gene26297.t1 | AT2G43480 | 32.298 | 322 | 192 | 10 | 17 | 323 | 25 | 335 | 4.36e-45 | 157 |
MS.gene26297.t1 | AT2G37130 | 33.333 | 300 | 189 | 6 | 30 | 323 | 2 | 296 | 5.47e-44 | 153 |
MS.gene26297.t1 | AT2G37130 | 33.115 | 305 | 193 | 6 | 25 | 323 | 28 | 327 | 8.26e-44 | 153 |
MS.gene26297.t1 | AT4G21960 | 30.921 | 304 | 198 | 6 | 27 | 324 | 31 | 328 | 2.26e-40 | 144 |
MS.gene26297.t1 | AT4G25980 | 43.017 | 179 | 95 | 5 | 23 | 201 | 67 | 238 | 1.84e-39 | 140 |
MS.gene26297.t1 | AT5G39580 | 41.379 | 174 | 94 | 5 | 31 | 204 | 29 | 194 | 1.03e-32 | 121 |
MS.gene26297.t1 | AT2G24800 | 41.279 | 172 | 94 | 3 | 24 | 195 | 28 | 192 | 1.27e-31 | 119 |
MS.gene26297.t1 | AT3G17070 | 29.181 | 281 | 179 | 9 | 55 | 323 | 4 | 276 | 1.93e-30 | 116 |
MS.gene26297.t1 | AT4G32320 | 27.240 | 279 | 132 | 11 | 41 | 304 | 99 | 321 | 3.55e-13 | 69.7 |
Find 45 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAGAACAACTAAGTCTTTA+AGG | 0.072110 | 5.4:-59604559 | None:intergenic |
TAAGGCTTTGTTGCATAAAA+AGG | 0.123833 | 5.4:+59604760 | MS.gene26297:CDS |
CCTCTAAGTGAATTGATATT+TGG | 0.168385 | 5.4:-59604014 | None:intergenic |
TATTCTTCTTCATTCATATT+TGG | 0.210525 | 5.4:-59604970 | None:intergenic |
CCAAATATCAATTCACTTAG+AGG | 0.217536 | 5.4:+59604014 | MS.gene26297:CDS |
TTGCAAATTGGCTGCAAAAT+TGG | 0.258452 | 5.4:-59604657 | None:intergenic |
AAAGACTTAGTTGTTCTATC+TGG | 0.291396 | 5.4:+59604563 | MS.gene26297:CDS |
CAAAAGACATGCCCTCAAAT+TGG | 0.293136 | 5.4:+59604677 | MS.gene26297:CDS |
AGTTGGGTGGTCACAAATAT+TGG | 0.366291 | 5.4:+59604411 | MS.gene26297:intron |
TTAACAACTGACTTTATGAT+TGG | 0.366348 | 5.4:-59602817 | None:intergenic |
CTATCTGGTGGTCACACAAT+TGG | 0.396721 | 5.4:+59604578 | MS.gene26297:CDS |
GTGAGATCAGGTGCAATTGC+AGG | 0.409083 | 5.4:+59604939 | MS.gene26297:CDS |
AGTTGACACAAAATACTATA+AGG | 0.410019 | 5.4:+59604742 | MS.gene26297:CDS |
TTTATGATTGGCAATGCCTT+AGG | 0.413524 | 5.4:-59602805 | None:intergenic |
GATGACACCCCTACCTTCAT+TGG | 0.418695 | 5.4:+59603975 | MS.gene26297:CDS |
TGGAGTTTCTATGATTAAGA+TGG | 0.424465 | 5.4:+59604886 | MS.gene26297:CDS |
TATTGGTACCAAGTGTTACT+AGG | 0.439781 | 5.4:+59604428 | MS.gene26297:CDS |
TGCAAAATTGGTGTTTATGT+TGG | 0.449391 | 5.4:-59604645 | None:intergenic |
TTGTCATCGCCGCCAATTTG+AGG | 0.456534 | 5.4:-59604689 | None:intergenic |
GGAGTTTCTATGATTAAGAT+GGG | 0.461747 | 5.4:+59604887 | MS.gene26297:CDS |
TTATGACAAAATTTGTCCTA+AGG | 0.469907 | 5.4:+59602789 | MS.gene26297:CDS |
CTCTTCTTCCTAGTAACACT+TGG | 0.476428 | 5.4:-59604436 | None:intergenic |
ATATCTGCACATGATATGAT+AGG | 0.478245 | 5.4:-59604089 | None:intergenic |
GTAACATAAAGCCACTTACT+TGG | 0.485911 | 5.4:+59604909 | MS.gene26297:CDS |
TGTCATCGCCGCCAATTTGA+GGG | 0.488295 | 5.4:-59604688 | None:intergenic |
GAGATTCAAGATTTGCAAGC+AGG | 0.488930 | 5.4:+59604456 | MS.gene26297:CDS |
TGCAGTCTTCTCACCAATGA+AGG | 0.489963 | 5.4:-59603988 | None:intergenic |
CTTGAAGGAGTAGAATCAAA+TGG | 0.501343 | 5.4:-59604719 | None:intergenic |
GACTTAGTTGTTCTATCTGG+TGG | 0.509368 | 5.4:+59604566 | MS.gene26297:CDS |
TCTTCTCACCAATGAAGGTA+GGG | 0.536322 | 5.4:-59603983 | None:intergenic |
GATGCACTAACTTTAGAAGC+AGG | 0.539387 | 5.4:+59604609 | MS.gene26297:CDS |
AAAGCTCTTGATCAGAATGA+AGG | 0.549289 | 5.4:-59604787 | None:intergenic |
AATTATTCGTGAGCCACGCA+TGG | 0.561525 | 5.4:+59602846 | MS.gene26297:CDS |
AGATTCAAGATTTGCAAGCA+GGG | 0.563486 | 5.4:+59604457 | MS.gene26297:CDS |
TGGTTCTCAAAGTGATAGAT+TGG | 0.568189 | 5.4:+59604820 | MS.gene26297:CDS |
AAGACATGCCCTCAAATTGG+CGG | 0.573926 | 5.4:+59604680 | MS.gene26297:CDS |
GTCTTCTCACCAATGAAGGT+AGG | 0.586272 | 5.4:-59603984 | None:intergenic |
GTGAAACTACAGGGTTGTGA+TGG | 0.586550 | 5.4:+59603939 | MS.gene26297:intron |
TGCATCAATTAACAGTTGGG+TGG | 0.588816 | 5.4:+59604398 | MS.gene26297:intron |
AGCAACGATGCTCCCATGCG+TGG | 0.600639 | 5.4:-59602859 | None:intergenic |
ATTATTCGTGAGCCACGCAT+GGG | 0.612352 | 5.4:+59602847 | MS.gene26297:CDS |
CTTCTCACCAATGAAGGTAG+GGG | 0.615489 | 5.4:-59603982 | None:intergenic |
ATTAGGAGTGAGATTTGCAA+CGG | 0.615865 | 5.4:-59602764 | None:intergenic |
GGAGTGAGATTTGCAACGGT+AGG | 0.629918 | 5.4:-59602760 | None:intergenic |
TTTACAAGCTTTGTCGACAG+CGG | 0.657875 | 5.4:-59604063 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr5.4:59603520-59603539 | None:intergenic | 10.0% |
!!! | AGTAAATTTTTTTTTTTTGT+AGG | - | chr5.4:59603456-59603475 | None:intergenic | 10.0% |
!!! | ATACAAATTTTGAATAAAAA+AGG | - | chr5.4:59603253-59603272 | None:intergenic | 10.0% |
!!! | GTAAATTTTTTTTTTTTGTA+GGG | - | chr5.4:59603455-59603474 | None:intergenic | 10.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | + | chr5.4:59603842-59603861 | MS.gene26297:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | - | chr5.4:59603861-59603842 | None:intergenic | 15.0% |
!! | AATTTCCATTATAGTATAAT+GGG | + | chr5.4:59603350-59603369 | MS.gene26297:intron | 15.0% |
!! | AGATATAAGTAACAAAAATA+TGG | + | chr5.4:59603651-59603670 | MS.gene26297:intron | 15.0% |
!! | TAAAAATCACAAGATAATAT+TGG | - | chr5.4:59602714-59602733 | None:intergenic | 15.0% |
!! | TAATTTCCATTATAGTATAA+TGG | + | chr5.4:59603349-59603368 | MS.gene26297:intron | 15.0% |
!!! | AAACAAAATTTATTTTAGCA+GGG | - | chr5.4:59603491-59603510 | None:intergenic | 15.0% |
!!! | AATTTTTGCGATATTTTTTT+CGG | + | chr5.4:59603686-59603705 | MS.gene26297:intron | 15.0% |
!!! | ATATTATCTTGTGATTTTTA+TGG | + | chr5.4:59602714-59602733 | MS.gene26297:CDS | 15.0% |
!!! | CAAATTTTGTCATAATAATT+AGG | - | chr5.4:59602784-59602803 | None:intergenic | 15.0% |
!!! | TAAACAAAATTTATTTTAGC+AGG | - | chr5.4:59603492-59603511 | None:intergenic | 15.0% |
!! | AAACAAATTTAGATTGAGTA+AGG | + | chr5.4:59603781-59603800 | MS.gene26297:intron | 20.0% |
!! | AAATTATAGTTGCAACATAT+TGG | - | chr5.4:59604159-59604178 | None:intergenic | 20.0% |
!! | GTTCAGAAATTAATTATACT+AGG | - | chr5.4:59603916-59603935 | None:intergenic | 20.0% |
!! | TAAAACCCATTATACTATAA+TGG | - | chr5.4:59603358-59603377 | None:intergenic | 20.0% |
!!! | AGAAACCTAATTTATTTTTC+CGG | - | chr5.4:59603168-59603187 | None:intergenic | 20.0% |
!!! | ATGGGTTTTAATTATGTTTT+TGG | + | chr5.4:59603368-59603387 | MS.gene26297:intron | 20.0% |
!!! | GTTTTTCAACAATTTTTTAC+AGG | - | chr5.4:59603740-59603759 | None:intergenic | 20.0% |
!!! | TACTAGGTTAATTATGTTTT+TGG | - | chr5.4:59603900-59603919 | None:intergenic | 20.0% |
! | AAGTAAGGACTAAATTTACA+AGG | - | chr5.4:59603411-59603430 | None:intergenic | 25.0% |
! | AGCTAAAAAAAGTTGAATTG+TGG | + | chr5.4:59603142-59603161 | MS.gene26297:intron | 25.0% |
! | AGTTGACACAAAATACTATA+AGG | + | chr5.4:59604742-59604761 | MS.gene26297:CDS | 25.0% |
! | ATAGAACAACTAAGTCTTTA+AGG | - | chr5.4:59604562-59604581 | None:intergenic | 25.0% |
! | CATATTGGAAATACTTACTA+TGG | - | chr5.4:59604144-59604163 | None:intergenic | 25.0% |
! | GTGTTAAGAACGTTATTAAA+AGG | - | chr5.4:59603716-59603735 | None:intergenic | 25.0% |
! | TTATGACAAAATTTGTCCTA+AGG | + | chr5.4:59602789-59602808 | MS.gene26297:CDS | 25.0% |
!! | AGCTATAAGAAAAAAGTACA+TGG | - | chr5.4:59602969-59602988 | None:intergenic | 25.0% |
!! | ATTTTGCATCAATTAACAGT+TGG | + | chr5.4:59604394-59604413 | MS.gene26297:intron | 25.0% |
!! | TGCTGTAAACTTTTATATTG+TGG | - | chr5.4:59604195-59604214 | None:intergenic | 25.0% |
!! | TTAACAACTGACTTTATGAT+TGG | - | chr5.4:59602820-59602839 | None:intergenic | 25.0% |
!! | TTTTATATTGTGGTAAAGTG+CGG | - | chr5.4:59604185-59604204 | None:intergenic | 25.0% |
!! | TTTTGCATCAATTAACAGTT+GGG | + | chr5.4:59604395-59604414 | MS.gene26297:intron | 25.0% |
!!! | AGAAGCATGATTTTAAATTG+CGG | - | chr5.4:59604236-59604255 | None:intergenic | 25.0% |
!!! | GCTTCTAGTTCTTAATAATT+TGG | + | chr5.4:59604250-59604269 | MS.gene26297:intron | 25.0% |
AAAAAAAGTTGAATTGTGGC+CGG | + | chr5.4:59603146-59603165 | MS.gene26297:intron | 30.0% | |
AAAGACTTAGTTGTTCTATC+TGG | + | chr5.4:59604563-59604582 | MS.gene26297:CDS | 30.0% | |
AAGTAAGGACTAAACTTACA+AGG | + | chr5.4:59603857-59603876 | MS.gene26297:intron | 30.0% | |
ATATCTGCACATGATATGAT+AGG | - | chr5.4:59604092-59604111 | None:intergenic | 30.0% | |
CCAAATATCAATTCACTTAG+AGG | + | chr5.4:59604014-59604033 | MS.gene26297:CDS | 30.0% | |
CCTCTAAGTGAATTGATATT+TGG | - | chr5.4:59604017-59604036 | None:intergenic | 30.0% | |
GATATTACAAAAACTTCGAG+AGG | + | chr5.4:59604309-59604328 | MS.gene26297:intron | 30.0% | |
GGAGTTTCTATGATTAAGAT+GGG | + | chr5.4:59604887-59604906 | MS.gene26297:CDS | 30.0% | |
TGGAGTTTCTATGATTAAGA+TGG | + | chr5.4:59604886-59604905 | MS.gene26297:CDS | 30.0% | |
TGTGAGATGTTAAAAAATGC+TGG | - | chr5.4:59604506-59604525 | None:intergenic | 30.0% | |
! | ATCACAAATTTTCAGTCTCA+AGG | + | chr5.4:59604530-59604549 | MS.gene26297:CDS | 30.0% |
! | CAAGTTTAGAACACTATGAA+AGG | + | chr5.4:59603554-59603573 | MS.gene26297:intron | 30.0% |
! | CATGCTTTTGCTTATGATTT+TGG | + | chr5.4:59604866-59604885 | MS.gene26297:CDS | 30.0% |
! | GAAGCATGATTTTAAATTGC+GGG | - | chr5.4:59604235-59604254 | None:intergenic | 30.0% |
! | TATTTTGTGTCAACTCTTGA+AGG | - | chr5.4:59604737-59604756 | None:intergenic | 30.0% |
! | TGCAAAATTGGTGTTTATGT+TGG | - | chr5.4:59604648-59604667 | None:intergenic | 30.0% |
!! | AAGGCTTTGTTGCATAAAAA+GGG | + | chr5.4:59604761-59604780 | MS.gene26297:CDS | 30.0% |
!! | TAAGGCTTTGTTGCATAAAA+AGG | + | chr5.4:59604760-59604779 | MS.gene26297:CDS | 30.0% |
!!! | GAGTGCAGAAATTTTTTGTA+TGG | + | chr5.4:59603813-59603832 | MS.gene26297:intron | 30.0% |
!!! | TTTTGCGATATTTTTTTCGG+AGG | + | chr5.4:59603689-59603708 | MS.gene26297:intron | 30.0% |
AAAGCTCTTGATCAGAATGA+AGG | - | chr5.4:59604790-59604809 | None:intergenic | 35.0% | |
AACTTGCGATTACAATTGGA+GGG | - | chr5.4:59604349-59604368 | None:intergenic | 35.0% | |
AAGCCACTTACTTGGAAAAA+TGG | + | chr5.4:59604917-59604936 | MS.gene26297:CDS | 35.0% | |
AGATTCAAGATTTGCAAGCA+GGG | + | chr5.4:59604457-59604476 | MS.gene26297:CDS | 35.0% | |
ATTAGGAGTGAGATTTGCAA+CGG | - | chr5.4:59602767-59602786 | None:intergenic | 35.0% | |
CTGAACTATGTGAAACTACA+GGG | + | chr5.4:59603930-59603949 | MS.gene26297:intron | 35.0% | |
CTTGAAGGAGTAGAATCAAA+TGG | - | chr5.4:59604722-59604741 | None:intergenic | 35.0% | |
GAACAACTTGCGATTACAAT+TGG | - | chr5.4:59604353-59604372 | None:intergenic | 35.0% | |
GAGATGTTAAAAAATGCTGG+TGG | - | chr5.4:59604503-59604522 | None:intergenic | 35.0% | |
GTAACATAAAGCCACTTACT+TGG | + | chr5.4:59604909-59604928 | MS.gene26297:CDS | 35.0% | |
TCTGAACTATGTGAAACTAC+AGG | + | chr5.4:59603929-59603948 | MS.gene26297:intron | 35.0% | |
TGGTTCTCAAAGTGATAGAT+TGG | + | chr5.4:59604820-59604839 | MS.gene26297:CDS | 35.0% | |
TGTGGCCGGAAAAATAAATT+AGG | + | chr5.4:59603160-59603179 | MS.gene26297:intron | 35.0% | |
TTGCAAATTGGCTGCAAAAT+TGG | - | chr5.4:59604660-59604679 | None:intergenic | 35.0% | |
TTTATGATTGGCAATGCCTT+AGG | - | chr5.4:59602808-59602827 | None:intergenic | 35.0% | |
! | CAATTCACTTAGAGGTTTTG+AGG | + | chr5.4:59604022-59604041 | MS.gene26297:CDS | 35.0% |
! | TACAAGGTCGCAATTTTGTA+GGG | + | chr5.4:59603873-59603892 | MS.gene26297:intron | 35.0% |
! | TACAAGGTCGCAATTTTGTA+GGG | - | chr5.4:59603892-59603873 | None:intergenic | 35.0% |
! | TATTGGTACCAAGTGTTACT+AGG | + | chr5.4:59604428-59604447 | MS.gene26297:CDS | 35.0% |
! | TCTGATCAAGAGCTTTTCAA+AGG | + | chr5.4:59604794-59604813 | MS.gene26297:CDS | 35.0% |
! | TTACAAGGTCGCAATTTTGT+AGG | + | chr5.4:59603872-59603891 | MS.gene26297:intron | 35.0% |
! | TTACAAGGTCGCAATTTTGT+AGG | - | chr5.4:59603891-59603872 | None:intergenic | 35.0% |
!! | TCACCATTTTTCCAAGTAAG+TGG | - | chr5.4:59604923-59604942 | None:intergenic | 35.0% |
AGTTGGGTGGTCACAAATAT+TGG | + | chr5.4:59604411-59604430 | MS.gene26297:intron | 40.0% | |
CAAAAGACATGCCCTCAAAT+TGG | + | chr5.4:59604677-59604696 | MS.gene26297:CDS | 40.0% | |
CAACTTGCGATTACAATTGG+AGG | - | chr5.4:59604350-59604369 | None:intergenic | 40.0% | |
CTCTTCTTCCTAGTAACACT+TGG | - | chr5.4:59604439-59604458 | None:intergenic | 40.0% | |
CTTGGAAAAATGGTGAGATC+AGG | + | chr5.4:59604927-59604946 | MS.gene26297:CDS | 40.0% | |
GACTTAGTTGTTCTATCTGG+TGG | + | chr5.4:59604566-59604585 | MS.gene26297:CDS | 40.0% | |
GAGATTCAAGATTTGCAAGC+AGG | + | chr5.4:59604456-59604475 | MS.gene26297:CDS | 40.0% | |
TACATGAAATCCACCTGTAG+AGG | - | chr5.4:59603208-59603227 | None:intergenic | 40.0% | |
TCTTCTCACCAATGAAGGTA+GGG | - | chr5.4:59603986-59604005 | None:intergenic | 40.0% | |
TGCATCAATTAACAGTTGGG+TGG | + | chr5.4:59604398-59604417 | MS.gene26297:intron | 40.0% | |
! | AGGGCATGTCTTTTGCAAAT+TGG | - | chr5.4:59604672-59604691 | None:intergenic | 40.0% |
! | CAAGAGCTTTTCAAAGGTGA+TGG | + | chr5.4:59604800-59604819 | MS.gene26297:CDS | 40.0% |
! | GATGCACTAACTTTAGAAGC+AGG | + | chr5.4:59604609-59604628 | MS.gene26297:CDS | 40.0% |
! | TTTACAAGCTTTGTCGACAG+CGG | - | chr5.4:59604066-59604085 | None:intergenic | 40.0% |
!! | TCAACTTGGTTGATGAGCTA+AGG | - | chr5.4:59603055-59603074 | None:intergenic | 40.0% |
AAGACATGCCCTCAAATTGG+CGG | + | chr5.4:59604680-59604699 | MS.gene26297:CDS | 45.0% | |
AATTATTCGTGAGCCACGCA+TGG | + | chr5.4:59602846-59602865 | MS.gene26297:CDS | 45.0% | |
ATTATTCGTGAGCCACGCAT+GGG | + | chr5.4:59602847-59602866 | MS.gene26297:CDS | 45.0% | |
CTATCTGGTGGTCACACAAT+TGG | + | chr5.4:59604578-59604597 | MS.gene26297:CDS | 45.0% | |
CTTCTCACCAATGAAGGTAG+GGG | - | chr5.4:59603985-59604004 | None:intergenic | 45.0% | |
GTCTTCTCACCAATGAAGGT+AGG | - | chr5.4:59603987-59604006 | None:intergenic | 45.0% | |
GTGAAACTACAGGGTTGTGA+TGG | + | chr5.4:59603939-59603958 | MS.gene26297:intron | 45.0% | |
TCCATTTCACGCGTTCAACT+TGG | - | chr5.4:59603069-59603088 | None:intergenic | 45.0% | |
TGCAGTCTTCTCACCAATGA+AGG | - | chr5.4:59603991-59604010 | None:intergenic | 45.0% | |
! | ACCAAGTTGAACGCGTGAAA+TGG | + | chr5.4:59603065-59603084 | MS.gene26297:intron | 45.0% |
AATCCACCTGTAGAGGCTAG+AGG | - | chr5.4:59603201-59603220 | None:intergenic | 50.0% | |
GATGACACCCCTACCTTCAT+TGG | + | chr5.4:59603975-59603994 | MS.gene26297:CDS | 50.0% | |
GGAGTGAGATTTGCAACGGT+AGG | - | chr5.4:59602763-59602782 | None:intergenic | 50.0% | |
GTGAGATCAGGTGCAATTGC+AGG | + | chr5.4:59604939-59604958 | MS.gene26297:CDS | 50.0% | |
TGTCATCGCCGCCAATTTGA+GGG | - | chr5.4:59604691-59604710 | None:intergenic | 50.0% | |
TTGTCATCGCCGCCAATTTG+AGG | - | chr5.4:59604692-59604711 | None:intergenic | 50.0% | |
TTTGCACCTCTAGCCTCTAC+AGG | + | chr5.4:59603192-59603211 | MS.gene26297:intron | 50.0% | |
AGCAACGATGCTCCCATGCG+TGG | - | chr5.4:59602862-59602881 | None:intergenic | 60.0% | |
GCACCTCTAGCCTCTACAGG+TGG | + | chr5.4:59603195-59603214 | MS.gene26297:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 59602697 | 59604979 | 59602697 | ID=MS.gene26297 |
chr5.4 | mRNA | 59602697 | 59604979 | 59602697 | ID=MS.gene26297.t1;Parent=MS.gene26297 |
chr5.4 | exon | 59602697 | 59602912 | 59602697 | ID=MS.gene26297.t1.exon1;Parent=MS.gene26297.t1 |
chr5.4 | CDS | 59602697 | 59602912 | 59602697 | ID=cds.MS.gene26297.t1;Parent=MS.gene26297.t1 |
chr5.4 | exon | 59603951 | 59604145 | 59603951 | ID=MS.gene26297.t1.exon2;Parent=MS.gene26297.t1 |
chr5.4 | CDS | 59603951 | 59604145 | 59603951 | ID=cds.MS.gene26297.t1;Parent=MS.gene26297.t1 |
chr5.4 | exon | 59604413 | 59604979 | 59604413 | ID=MS.gene26297.t1.exon3;Parent=MS.gene26297.t1 |
chr5.4 | CDS | 59604413 | 59604979 | 59604413 | ID=cds.MS.gene26297.t1;Parent=MS.gene26297.t1 |
Gene Sequence |
Protein sequence |