Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26533.t1 | XP_003608020.1 | 89.1 | 320 | 33 | 2 | 1 | 318 | 1 | 320 | 1.80E-148 | 535.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26533.t1 | G7JMG3 | 89.1 | 320 | 33 | 2 | 1 | 318 | 1 | 320 | 1.3e-148 | 535.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055202 | MS.gene26533 | 0.806771 | 7.00E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26533.t1 | MTR_4g086620 | 95.312 | 320 | 13 | 2 | 1 | 318 | 1 | 320 | 0.0 | 583 |
| MS.gene26533.t1 | MTR_1g033900 | 47.600 | 250 | 108 | 8 | 78 | 318 | 42 | 277 | 1.25e-63 | 202 |
| MS.gene26533.t1 | MTR_3g101320 | 37.879 | 330 | 148 | 12 | 1 | 304 | 1 | 299 | 6.58e-48 | 163 |
| MS.gene26533.t1 | MTR_1g021070 | 37.460 | 315 | 163 | 9 | 1 | 299 | 1 | 297 | 2.06e-37 | 135 |
| MS.gene26533.t1 | MTR_1g083860 | 62.500 | 40 | 15 | 0 | 261 | 300 | 339 | 378 | 4.43e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26533.t1 | AT2G15760 | 47.385 | 325 | 125 | 12 | 16 | 318 | 13 | 313 | 1.62e-65 | 209 |
| MS.gene26533.t1 | AT2G26530 | 34.700 | 317 | 142 | 10 | 27 | 291 | 6 | 309 | 4.10e-30 | 116 |
| MS.gene26533.t1 | AT2G26530 | 35.034 | 294 | 145 | 9 | 27 | 291 | 6 | 282 | 2.89e-28 | 111 |
| MS.gene26533.t1 | AT3G62630 | 33.523 | 352 | 155 | 12 | 15 | 300 | 20 | 358 | 3.08e-26 | 107 |
Find 80 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACGAAAGGTTATAGAAAA+TGG | 0.194666 | 4.1:-23264743 | MS.gene26533:CDS |
| TTTCGGGTTCTCGGAGAATT+TGG | 0.210858 | 4.1:+23264999 | None:intergenic |
| AAAGCCGTGTACTTTCTTAA+AGG | 0.259373 | 4.1:+23264660 | None:intergenic |
| CCTAACAAACCTCTCTTATA+AGG | 0.292036 | 4.1:+23264474 | None:intergenic |
| GAGGCGGCGTGGACCGGTTT+CGG | 0.316234 | 4.1:-23264562 | MS.gene26533:CDS |
| AAGTTAGGAATTCTAGTTTC+CGG | 0.322138 | 4.1:-23264611 | MS.gene26533:CDS |
| GATCAGATTTCTAGGGGAAT+AGG | 0.326427 | 4.1:-23264426 | MS.gene26533:CDS |
| AGAGAGAGGGTAACATCTTC+TGG | 0.329195 | 4.1:-23264885 | MS.gene26533:CDS |
| AGAGGTTTGTTAGGTTGCTT+GGG | 0.330469 | 4.1:-23264465 | MS.gene26533:CDS |
| TATGATGTCTGAGACTCTTA+AGG | 0.363599 | 4.1:+23264836 | None:intergenic |
| CCTTATAAGAGAGGTTTGTT+AGG | 0.366681 | 4.1:-23264474 | MS.gene26533:CDS |
| GAGAGGTTTGTTAGGTTGCT+TGG | 0.366833 | 4.1:-23264466 | MS.gene26533:CDS |
| ATTGTTACTGTGGTTGGGTT+TGG | 0.389321 | 4.1:+23265148 | None:intergenic |
| CAGCGGAAAGAGACTCTCTT+TGG | 0.394113 | 4.1:+23265072 | None:intergenic |
| TTCCGGTCTACTGAGAGTTC+CGG | 0.396689 | 4.1:-23264594 | MS.gene26533:CDS |
| ATTTGGTGGCAAGGGTTTCA+TGG | 0.403971 | 4.1:+23265016 | None:intergenic |
| GAAGAAGGAGCAGTGATGTA+TGG | 0.409446 | 4.1:+23265269 | None:intergenic |
| TAGGTATTGTTACTGTGGTT+GGG | 0.411253 | 4.1:+23265143 | None:intergenic |
| AAATTCATTATACAATAAAC+CGG | 0.416115 | 4.1:-23264533 | MS.gene26533:CDS |
| CTGTCGAAGTTGAAGTCTAC+TGG | 0.423041 | 4.1:+23265305 | None:intergenic |
| ATCGTATGGATCAGATTTCT+AGG | 0.429816 | 4.1:-23264434 | MS.gene26533:CDS |
| ATCAGATTTCTAGGGGAATA+GGG | 0.439777 | 4.1:-23264425 | MS.gene26533:CDS |
| TCTTCAATTGCAGCTTCAAA+TGG | 0.444134 | 4.1:+23264939 | None:intergenic |
| AATGGATTAGAATCTCTCTC+AGG | 0.447285 | 4.1:+23264957 | None:intergenic |
| CTCGGAGAATTTGGTGGCAA+GGG | 0.453149 | 4.1:+23265008 | None:intergenic |
| CGGGTTCTCGGAGAATTTGG+TGG | 0.458496 | 4.1:+23265002 | None:intergenic |
| GTAGGTATTGTTACTGTGGT+TGG | 0.458996 | 4.1:+23265142 | None:intergenic |
| ATGTTGCGGAAGATGAAGTT+AGG | 0.464779 | 4.1:-23264626 | MS.gene26533:CDS |
| ATGATGTCTGAGACTCTTAA+GGG | 0.472096 | 4.1:+23264837 | None:intergenic |
| AGTTGTTGGCAAAGCGTTGA+GGG | 0.472332 | 4.1:+23265246 | None:intergenic |
| GAAACACGAGAGGGGCTAGT+AGG | 0.477605 | 4.1:+23265209 | None:intergenic |
| AGTAACAATACCTACAGCTT+TGG | 0.480575 | 4.1:-23265134 | MS.gene26533:CDS |
| TGAATTTCATGAGCCGAAAC+CGG | 0.482848 | 4.1:+23264549 | None:intergenic |
| GTCGAAGAGTTCGTCGGCAG+CGG | 0.487698 | 4.1:+23265055 | None:intergenic |
| GGAGGAGTAGGTGGTGCAAC+TGG | 0.493753 | 4.1:+23265326 | None:intergenic |
| TTTGGTGGCAAGGGTTTCAT+GGG | 0.497787 | 4.1:+23265017 | None:intergenic |
| AAGAGAAACGAGGAAGAGAG+AGG | 0.499129 | 4.1:-23264899 | MS.gene26533:CDS |
| GCCGACGAACTCTTCGACGG+TGG | 0.502412 | 4.1:-23265050 | MS.gene26533:CDS |
| CTCAGACATCATAGAAAACT+CGG | 0.512783 | 4.1:-23264826 | MS.gene26533:CDS |
| AGAGAAACGAGGAAGAGAGA+GGG | 0.521264 | 4.1:-23264898 | MS.gene26533:CDS |
| ACGCCGCCTCGAAAACGAAC+CGG | 0.521604 | 4.1:+23264575 | None:intergenic |
| GGTTTGGTGTCTGTGTTGAA+AGG | 0.522600 | 4.1:+23265164 | None:intergenic |
| TCGTATGGATCAGATTTCTA+GGG | 0.523770 | 4.1:-23264433 | MS.gene26533:CDS |
| CGGAAAGAGACTCTCTTTGG+AGG | 0.528068 | 4.1:+23265075 | None:intergenic |
| GCAAAGCGTTGAGGGGAAGA+AGG | 0.531397 | 4.1:+23265254 | None:intergenic |
| TCTCGGAGAATTTGGTGGCA+AGG | 0.532414 | 4.1:+23265007 | None:intergenic |
| TTGAAGTCTACTGGAGGAGT+AGG | 0.534382 | 4.1:+23265314 | None:intergenic |
| GAAAAGAGGTGAAACACGAG+AGG | 0.536261 | 4.1:+23265199 | None:intergenic |
| TCATTCTTGTCTTTCACGAA+AGG | 0.539390 | 4.1:-23264756 | MS.gene26533:CDS |
| GTGGCAAGGGTTTCATGGGA+CGG | 0.539440 | 4.1:+23265021 | None:intergenic |
| GGAGAGGATTCAGAGAAAAG+AGG | 0.540434 | 4.1:+23265185 | None:intergenic |
| TGATTTCACGTTGTTGCTTG+TGG | 0.543953 | 4.1:+23264776 | None:intergenic |
| CTTGGGGTCTGATAATCGTA+TGG | 0.547362 | 4.1:-23264448 | MS.gene26533:CDS |
| AGCACTGAAGAAGAAGTTGT+TGG | 0.548548 | 4.1:+23265232 | None:intergenic |
| ACTTTCTTGCCTTATAAGAG+AGG | 0.561724 | 4.1:-23264483 | MS.gene26533:CDS |
| GTAACATCTTCTGGTAGGAA+AGG | 0.563289 | 4.1:-23264876 | MS.gene26533:CDS |
| AAGTTGTTGGCAAAGCGTTG+AGG | 0.577258 | 4.1:+23265245 | None:intergenic |
| AATAAACCGGGCTGTTACTG+AGG | 0.581120 | 4.1:-23264520 | MS.gene26533:CDS |
| AACCGGAACTCTCAGTAGAC+CGG | 0.581489 | 4.1:+23264592 | None:intergenic |
| TCATCTCCTCAGTAACAGCC+CGG | 0.584089 | 4.1:+23264514 | None:intergenic |
| TTATTTCGAAGTGCTTCTGA+AGG | 0.586263 | 4.1:-23264702 | MS.gene26533:CDS |
| GAGGTTTGTTAGGTTGCTTG+GGG | 0.588034 | 4.1:-23264464 | MS.gene26533:CDS |
| GCTGCCGACGAACTCTTCGA+CGG | 0.592034 | 4.1:-23265053 | MS.gene26533:CDS |
| AAGTCTACTGGAGGAGTAGG+TGG | 0.593797 | 4.1:+23265317 | None:intergenic |
| GGTGTCTGTGTTGAAAGGAG+AGG | 0.596803 | 4.1:+23265169 | None:intergenic |
| AGAGGGTAACATCTTCTGGT+AGG | 0.603343 | 4.1:-23264881 | MS.gene26533:CDS |
| ATGGATTAGAATCTCTCTCA+GGG | 0.606714 | 4.1:+23264958 | None:intergenic |
| CTTCTGGTAGGAAAGGAAGC+AGG | 0.611736 | 4.1:-23264869 | MS.gene26533:CDS |
| AGGAGCAGTGATGTATGGAG+AGG | 0.616178 | 4.1:+23265274 | None:intergenic |
| AGATCCTTTAAGAAAGTACA+CGG | 0.623325 | 4.1:-23264664 | MS.gene26533:CDS |
| ATCATCGTTGCCAAAGCTGT+AGG | 0.634742 | 4.1:+23265124 | None:intergenic |
| AAAAGAGGTGAAACACGAGA+GGG | 0.637631 | 4.1:+23265200 | None:intergenic |
| GTTGTTGGCAAAGCGTTGAG+GGG | 0.637798 | 4.1:+23265247 | None:intergenic |
| TCCACCGTCGAAGAGTTCGT+CGG | 0.640334 | 4.1:+23265049 | None:intergenic |
| CGTATGGATCAGATTTCTAG+GGG | 0.644629 | 4.1:-23264432 | MS.gene26533:CDS |
| AGCTGTAGGTATTGTTACTG+TGG | 0.652638 | 4.1:+23265138 | None:intergenic |
| AATTCATTATACAATAAACC+GGG | 0.656253 | 4.1:-23264532 | MS.gene26533:CDS |
| AAAGAGGTGAAACACGAGAG+GGG | 0.702846 | 4.1:+23265201 | None:intergenic |
| TCGAAGTTGAAGTCTACTGG+AGG | 0.704855 | 4.1:+23265308 | None:intergenic |
| AGAAAAGAAGAAGAGAAACG+AGG | 0.705793 | 4.1:-23264909 | MS.gene26533:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCATTATACAATAAAC+CGG | - | chr4.1:23265215-23265234 | MS.gene26533:CDS | 15.0% |
| !! | AATTCATTATACAATAAACC+GGG | - | chr4.1:23265216-23265235 | MS.gene26533:CDS | 20.0% |
| !!! | TATGAACTGTTTTTTTCTTT+CGG | + | chr4.1:23264769-23264788 | None:intergenic | 20.0% |
| ! | TTTGTCTAAGAAAAATGTTG+CGG | - | chr4.1:23265108-23265127 | MS.gene26533:CDS | 25.0% |
| !!! | ATGAACTGTTTTTTTCTTTC+GGG | + | chr4.1:23264768-23264787 | None:intergenic | 25.0% |
| TCACGAAAGGTTATAGAAAA+TGG | - | chr4.1:23265005-23265024 | MS.gene26533:CDS | 30.0% | |
| ! | AGATCCTTTAAGAAAGTACA+CGG | - | chr4.1:23265084-23265103 | MS.gene26533:CDS | 30.0% |
| ! | TTTCTCTTCTTCTTTTCTCA+AGG | + | chr4.1:23264837-23264856 | None:intergenic | 30.0% |
| !! | AAGTTAGGAATTCTAGTTTC+CGG | - | chr4.1:23265137-23265156 | MS.gene26533:CDS | 30.0% |
| AAAGCCGTGTACTTTCTTAA+AGG | + | chr4.1:23265091-23265110 | None:intergenic | 35.0% | |
| ACTTTCTTGCCTTATAAGAG+AGG | - | chr4.1:23265265-23265284 | MS.gene26533:CDS | 35.0% | |
| AGAAAAGAAGAAGAGAAACG+AGG | - | chr4.1:23264839-23264858 | MS.gene26533:CDS | 35.0% | |
| AGTAACAATACCTACAGCTT+TGG | - | chr4.1:23264614-23264633 | MS.gene26533:CDS | 35.0% | |
| ATCGTATGGATCAGATTTCT+AGG | - | chr4.1:23265314-23265333 | MS.gene26533:CDS | 35.0% | |
| CCTAACAAACCTCTCTTATA+AGG | + | chr4.1:23265277-23265296 | None:intergenic | 35.0% | |
| CTCAGACATCATAGAAAACT+CGG | - | chr4.1:23264922-23264941 | MS.gene26533:CDS | 35.0% | |
| TCATTCTTGTCTTTCACGAA+AGG | - | chr4.1:23264992-23265011 | MS.gene26533:CDS | 35.0% | |
| TCGTATGGATCAGATTTCTA+GGG | - | chr4.1:23265315-23265334 | MS.gene26533:CDS | 35.0% | |
| TCTTCAATTGCAGCTTCAAA+TGG | + | chr4.1:23264812-23264831 | None:intergenic | 35.0% | |
| ! | ATCAGATTTCTAGGGGAATA+GGG | - | chr4.1:23265323-23265342 | MS.gene26533:CDS | 35.0% |
| ! | ATGATGTCTGAGACTCTTAA+GGG | + | chr4.1:23264914-23264933 | None:intergenic | 35.0% |
| ! | CCTTATAAGAGAGGTTTGTT+AGG | - | chr4.1:23265274-23265293 | MS.gene26533:CDS | 35.0% |
| ! | TAGGTATTGTTACTGTGGTT+GGG | + | chr4.1:23264608-23264627 | None:intergenic | 35.0% |
| ! | TATGATGTCTGAGACTCTTA+AGG | + | chr4.1:23264915-23264934 | None:intergenic | 35.0% |
| ! | TTATTTCGAAGTGCTTCTGA+AGG | - | chr4.1:23265046-23265065 | MS.gene26533:CDS | 35.0% |
| !! | AATGGATTAGAATCTCTCTC+AGG | + | chr4.1:23264794-23264813 | None:intergenic | 35.0% |
| !! | ATGGATTAGAATCTCTCTCA+GGG | + | chr4.1:23264793-23264812 | None:intergenic | 35.0% |
| !!! | GATTTTGAGTTCGATTTCAG+TGG | - | chr4.1:23264647-23264666 | MS.gene26533:CDS | 35.0% |
| !!! | GTTTTTTTCTTTCGGGTTCT+CGG | + | chr4.1:23264761-23264780 | None:intergenic | 35.0% |
| AAAAGAGGTGAAACACGAGA+GGG | + | chr4.1:23264551-23264570 | None:intergenic | 40.0% | |
| ATGTTGCGGAAGATGAAGTT+AGG | - | chr4.1:23265122-23265141 | MS.gene26533:CDS | 40.0% | |
| ATTGTTACTGTGGTTGGGTT+TGG | + | chr4.1:23264603-23264622 | None:intergenic | 40.0% | |
| GTAACATCTTCTGGTAGGAA+AGG | - | chr4.1:23264872-23264891 | MS.gene26533:CDS | 40.0% | |
| TGAATTTCATGAGCCGAAAC+CGG | + | chr4.1:23265202-23265221 | None:intergenic | 40.0% | |
| ! | AGCACTGAAGAAGAAGTTGT+TGG | + | chr4.1:23264519-23264538 | None:intergenic | 40.0% |
| ! | AGCTGTAGGTATTGTTACTG+TGG | + | chr4.1:23264613-23264632 | None:intergenic | 40.0% |
| ! | CGTATGGATCAGATTTCTAG+GGG | - | chr4.1:23265316-23265335 | MS.gene26533:CDS | 40.0% |
| ! | GATCAGATTTCTAGGGGAAT+AGG | - | chr4.1:23265322-23265341 | MS.gene26533:CDS | 40.0% |
| ! | GTAGGTATTGTTACTGTGGT+TGG | + | chr4.1:23264609-23264628 | None:intergenic | 40.0% |
| ! | TGATTTCACGTTGTTGCTTG+TGG | + | chr4.1:23264975-23264994 | None:intergenic | 40.0% |
| !! | AGAGGTTTGTTAGGTTGCTT+GGG | - | chr4.1:23265283-23265302 | MS.gene26533:CDS | 40.0% |
| AAAGAGGTGAAACACGAGAG+GGG | + | chr4.1:23264550-23264569 | None:intergenic | 45.0% | |
| AAGAGAAACGAGGAAGAGAG+AGG | - | chr4.1:23264849-23264868 | MS.gene26533:CDS | 45.0% | |
| AATAAACCGGGCTGTTACTG+AGG | - | chr4.1:23265228-23265247 | MS.gene26533:CDS | 45.0% | |
| AGAGAAACGAGGAAGAGAGA+GGG | - | chr4.1:23264850-23264869 | MS.gene26533:CDS | 45.0% | |
| AGAGAGAGGGTAACATCTTC+TGG | - | chr4.1:23264863-23264882 | MS.gene26533:CDS | 45.0% | |
| AGAGGGTAACATCTTCTGGT+AGG | - | chr4.1:23264867-23264886 | MS.gene26533:CDS | 45.0% | |
| ATCATCGTTGCCAAAGCTGT+AGG | + | chr4.1:23264627-23264646 | None:intergenic | 45.0% | |
| CTGTCGAAGTTGAAGTCTAC+TGG | + | chr4.1:23264446-23264465 | None:intergenic | 45.0% | |
| CTTGGGGTCTGATAATCGTA+TGG | - | chr4.1:23265300-23265319 | MS.gene26533:CDS | 45.0% | |
| GAAAAGAGGTGAAACACGAG+AGG | + | chr4.1:23264552-23264571 | None:intergenic | 45.0% | |
| GAAGAAGGAGCAGTGATGTA+TGG | + | chr4.1:23264482-23264501 | None:intergenic | 45.0% | |
| GGAGAGGATTCAGAGAAAAG+AGG | + | chr4.1:23264566-23264585 | None:intergenic | 45.0% | |
| TCGAAGTTGAAGTCTACTGG+AGG | + | chr4.1:23264443-23264462 | None:intergenic | 45.0% | |
| TTGAAGTCTACTGGAGGAGT+AGG | + | chr4.1:23264437-23264456 | None:intergenic | 45.0% | |
| ! | ATTTGGTGGCAAGGGTTTCA+TGG | + | chr4.1:23264735-23264754 | None:intergenic | 45.0% |
| ! | TTTGGTGGCAAGGGTTTCAT+GGG | + | chr4.1:23264734-23264753 | None:intergenic | 45.0% |
| !! | AAGTTGTTGGCAAAGCGTTG+AGG | + | chr4.1:23264506-23264525 | None:intergenic | 45.0% |
| !! | AGTTGTTGGCAAAGCGTTGA+GGG | + | chr4.1:23264505-23264524 | None:intergenic | 45.0% |
| !! | GAGAGGTTTGTTAGGTTGCT+TGG | - | chr4.1:23265282-23265301 | MS.gene26533:CDS | 45.0% |
| !! | GAGGTTTGTTAGGTTGCTTG+GGG | - | chr4.1:23265284-23265303 | MS.gene26533:CDS | 45.0% |
| !! | GGTTTGGTGTCTGTGTTGAA+AGG | + | chr4.1:23264587-23264606 | None:intergenic | 45.0% |
| !! | TTTCGGGTTCTCGGAGAATT+TGG | + | chr4.1:23264752-23264771 | None:intergenic | 45.0% |
| AACCGGAACTCTCAGTAGAC+CGG | + | chr4.1:23265159-23265178 | None:intergenic | 50.0% | |
| AAGTCTACTGGAGGAGTAGG+TGG | + | chr4.1:23264434-23264453 | None:intergenic | 50.0% | |
| AGGAGCAGTGATGTATGGAG+AGG | + | chr4.1:23264477-23264496 | None:intergenic | 50.0% | |
| CAGCGGAAAGAGACTCTCTT+TGG | + | chr4.1:23264679-23264698 | None:intergenic | 50.0% | |
| CGGAAAGAGACTCTCTTTGG+AGG | + | chr4.1:23264676-23264695 | None:intergenic | 50.0% | |
| CTTCTGGTAGGAAAGGAAGC+AGG | - | chr4.1:23264879-23264898 | MS.gene26533:CDS | 50.0% | |
| GGTGTCTGTGTTGAAAGGAG+AGG | + | chr4.1:23264582-23264601 | None:intergenic | 50.0% | |
| TCATCTCCTCAGTAACAGCC+CGG | + | chr4.1:23265237-23265256 | None:intergenic | 50.0% | |
| TTCCGGTCTACTGAGAGTTC+CGG | - | chr4.1:23265154-23265173 | MS.gene26533:CDS | 50.0% | |
| ! | CTCGGAGAATTTGGTGGCAA+GGG | + | chr4.1:23264743-23264762 | None:intergenic | 50.0% |
| ! | TCTCGGAGAATTTGGTGGCA+AGG | + | chr4.1:23264744-23264763 | None:intergenic | 50.0% |
| !! | AGAGTTCCGGTTCGTTTTCG+AGG | - | chr4.1:23265167-23265186 | MS.gene26533:CDS | 50.0% |
| !! | GTTGTTGGCAAAGCGTTGAG+GGG | + | chr4.1:23264504-23264523 | None:intergenic | 50.0% |
| CGGGTTCTCGGAGAATTTGG+TGG | + | chr4.1:23264749-23264768 | None:intergenic | 55.0% | |
| GTGGCAAGGGTTTCATGGGA+CGG | + | chr4.1:23264730-23264749 | None:intergenic | 55.0% | |
| TCCACCGTCGAAGAGTTCGT+CGG | + | chr4.1:23264702-23264721 | None:intergenic | 55.0% | |
| ! | GAAACACGAGAGGGGCTAGT+AGG | + | chr4.1:23264542-23264561 | None:intergenic | 55.0% |
| !! | GCAAAGCGTTGAGGGGAAGA+AGG | + | chr4.1:23264497-23264516 | None:intergenic | 55.0% |
| !! | GTTCCGGTTCGTTTTCGAGG+CGG | - | chr4.1:23265170-23265189 | MS.gene26533:CDS | 55.0% |
| ACGCCGCCTCGAAAACGAAC+CGG | + | chr4.1:23265176-23265195 | None:intergenic | 60.0% | |
| GCTGCCGACGAACTCTTCGA+CGG | - | chr4.1:23264695-23264714 | MS.gene26533:CDS | 60.0% | |
| GGAGGAGTAGGTGGTGCAAC+TGG | + | chr4.1:23264425-23264444 | None:intergenic | 60.0% | |
| GTCGAAGAGTTCGTCGGCAG+CGG | + | chr4.1:23264696-23264715 | None:intergenic | 60.0% | |
| GCCGACGAACTCTTCGACGG+TGG | - | chr4.1:23264698-23264717 | MS.gene26533:CDS | 65.0% | |
| !! | GGTTCGTTTTCGAGGCGGCG+TGG | - | chr4.1:23265175-23265194 | MS.gene26533:CDS | 65.0% |
| !! | GTTTTCGAGGCGGCGTGGAC+CGG | - | chr4.1:23265180-23265199 | MS.gene26533:CDS | 65.0% |
| ! | GAGGCGGCGTGGACCGGTTT+CGG | - | chr4.1:23265186-23265205 | MS.gene26533:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 23264407 | 23265363 | 23264407 | ID=MS.gene26533 |
| chr4.1 | mRNA | 23264407 | 23265363 | 23264407 | ID=MS.gene26533.t1;Parent=MS.gene26533 |
| chr4.1 | exon | 23264407 | 23265363 | 23264407 | ID=MS.gene26533.t1.exon1;Parent=MS.gene26533.t1 |
| chr4.1 | CDS | 23264407 | 23265363 | 23264407 | ID=cds.MS.gene26533.t1;Parent=MS.gene26533.t1 |
| Gene Sequence |
| Protein sequence |