AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26651


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26651.t1 MTR_8g041390 63.710 372 125 5 11 373 9 379 1.33e-169 479
MS.gene26651.t1 MTR_3g012420 58.824 391 152 5 2 388 4 389 6.03e-163 463
MS.gene26651.t1 MTR_1g030580 51.124 356 168 2 4 357 3 354 7.60e-128 373
MS.gene26651.t1 MTR_3g072500 47.423 388 194 6 2 383 7 390 2.09e-125 367
MS.gene26651.t1 MTR_7g100050 52.553 333 153 2 6 337 4 332 2.08e-124 364
MS.gene26651.t1 MTR_1g068630 49.859 355 167 4 7 356 7 355 4.05e-122 358
MS.gene26651.t1 MTR_3g072560 47.904 334 168 1 11 344 14 341 6.74e-113 336
MS.gene26651.t1 MTR_3g072530 45.593 329 171 3 12 337 11 334 9.20e-112 332
MS.gene26651.t1 MTR_1g030600 47.633 338 174 2 8 344 11 346 2.05e-111 332
MS.gene26651.t1 MTR_0096s0100 45.317 331 175 2 15 344 18 343 1.53e-102 308
MS.gene26651.t1 MTR_3g072520 46.084 332 176 2 9 339 3 332 1.93e-100 303
MS.gene26651.t1 MTR_1g074070 43.027 337 182 5 11 345 12 340 2.04e-93 284
MS.gene26651.t1 MTR_1g051120 41.761 352 198 4 6 356 7 352 8.94e-93 283
MS.gene26651.t1 MTR_1g074120 41.964 336 187 3 11 345 12 340 5.66e-89 273
MS.gene26651.t1 MTR_1g074020 42.090 335 186 3 12 345 10 337 2.24e-88 271
MS.gene26651.t1 MTR_1g074160 42.090 335 186 4 12 345 10 337 3.10e-88 271
MS.gene26651.t1 MTR_1g073990 42.560 336 186 3 11 345 12 341 1.39e-87 270
MS.gene26651.t1 MTR_7g111830 39.237 367 216 4 16 377 8 372 1.05e-86 268
MS.gene26651.t1 MTR_6g036450 36.620 355 218 4 12 365 13 361 1.08e-84 262
MS.gene26651.t1 MTR_3g072500 47.170 265 136 2 2 265 7 268 1.44e-84 259
MS.gene26651.t1 MTR_3g072500 46.207 290 146 6 100 383 2 287 7.36e-84 258
MS.gene26651.t1 MTR_1g070175 36.119 335 206 1 11 345 12 338 5.05e-82 255
MS.gene26651.t1 MTR_3g112480 39.368 348 202 1 5 343 10 357 8.68e-82 256
MS.gene26651.t1 MTR_2g007990 38.261 345 206 3 1 343 3 342 5.08e-80 251
MS.gene26651.t1 MTR_4g106720 37.462 331 202 2 10 339 6 332 2.94e-79 248
MS.gene26651.t1 MTR_2g007960 38.209 335 199 3 15 343 12 344 5.77e-79 248
MS.gene26651.t1 MTR_2g027030 38.529 340 201 3 12 348 9 343 6.80e-79 248
MS.gene26651.t1 MTR_1g023180 38.028 355 206 2 4 344 10 364 1.38e-78 248
MS.gene26651.t1 MTR_4g094340 38.253 332 200 4 15 344 9 337 1.82e-75 238
MS.gene26651.t1 MTR_4g094340 38.253 332 200 4 15 344 27 355 2.79e-75 238
MS.gene26651.t1 MTR_2g007970 38.053 339 204 2 15 351 12 346 5.32e-75 238
MS.gene26651.t1 MTR_3g095420 34.286 350 215 2 16 350 8 357 6.04e-75 237
MS.gene26651.t1 MTR_6g081840 37.500 336 210 0 24 359 19 354 2.48e-74 236
MS.gene26651.t1 MTR_5g021160 37.651 332 205 1 12 343 4 333 3.22e-73 233
MS.gene26651.t1 MTR_2g016710 37.117 326 199 3 15 340 8 327 1.17e-72 231
MS.gene26651.t1 MTR_3g095460 33.431 341 214 2 15 349 5 338 2.70e-72 229
MS.gene26651.t1 MTR_4g094362 35.942 345 213 4 12 352 11 351 1.38e-70 226
MS.gene26651.t1 MTR_4g094342 37.500 328 194 3 11 332 9 331 2.04e-70 226
MS.gene26651.t1 MTR_1g030400 34.247 365 214 4 24 377 16 365 2.62e-70 226
MS.gene26651.t1 MTR_2g102340 36.202 337 209 3 10 345 7 338 1.01e-69 224
MS.gene26651.t1 MTR_4g094352 37.240 384 227 7 11 388 8 383 3.02e-69 223
MS.gene26651.t1 MTR_1g114210 33.621 348 224 4 7 352 3 345 9.29e-69 221
MS.gene26651.t1 MTR_1g038560 35.000 340 210 4 15 351 3 334 8.13e-68 218
MS.gene26651.t1 MTR_3g072500 48.585 212 105 2 2 212 7 215 1.52e-67 213
MS.gene26651.t1 MTR_2g007260 36.826 334 204 3 15 343 14 345 5.35e-67 218
MS.gene26651.t1 MTR_3g072530 36.897 290 141 4 12 264 11 295 8.70e-67 214
MS.gene26651.t1 MTR_8g006010 37.059 340 200 4 16 350 11 341 3.10e-66 215
MS.gene26651.t1 MTR_3g095450 34.104 346 220 3 16 356 6 348 3.59e-66 214
MS.gene26651.t1 MTR_3g112480 39.649 285 163 1 68 343 18 302 1.73e-64 209
MS.gene26651.t1 MTR_4g094360 35.135 333 213 2 12 343 11 341 2.46e-64 211
MS.gene26651.t1 MTR_8g006090 37.101 345 204 4 16 355 12 348 1.16e-63 208
MS.gene26651.t1 MTR_8g092650 33.233 331 215 2 12 338 2 330 1.45e-62 205
MS.gene26651.t1 MTR_3g095440 35.838 346 214 3 16 356 6 348 6.59e-62 203
MS.gene26651.t1 MTR_8g006120 35.417 336 202 3 16 345 11 337 8.81e-62 203
MS.gene26651.t1 MTR_3g090550 34.441 331 208 4 16 344 7 330 1.67e-60 199
MS.gene26651.t1 MTR_1g074160 40.392 255 145 3 12 265 10 258 1.78e-60 197
MS.gene26651.t1 MTR_2g065550 34.139 331 211 3 16 344 11 336 2.32e-60 199
MS.gene26651.t1 MTR_2g016710 34.405 311 198 3 15 325 8 312 2.37e-60 198
MS.gene26651.t1 MTR_5g034990 31.402 328 217 2 12 339 11 330 1.95e-59 197
MS.gene26651.t1 MTR_5g034910 35.061 328 203 5 20 344 12 332 4.77e-59 195
MS.gene26651.t1 MTR_1g014510 31.395 344 227 4 1 342 1 337 2.63e-58 196
MS.gene26651.t1 MTR_5g034980 35.404 322 196 5 20 337 12 325 3.28e-58 193
MS.gene26651.t1 MTR_4g094340 39.130 253 150 3 94 344 21 271 1.23e-57 190
MS.gene26651.t1 MTR_8g076800 64.596 161 47 4 130 289 94 245 1.46e-57 189
MS.gene26651.t1 MTR_0103s0090 34.615 338 206 6 11 344 7 333 1.77e-57 192
MS.gene26651.t1 MTR_4g129650 30.499 341 223 4 16 351 9 340 7.93e-56 188
MS.gene26651.t1 MTR_5g025290 34.718 337 206 4 15 339 11 345 2.00e-55 187
MS.gene26651.t1 MTR_5g025290 34.718 337 206 4 15 339 39 373 3.62e-55 187
MS.gene26651.t1 MTR_1g052205 44.726 237 108 8 123 351 6 227 4.49e-55 182
MS.gene26651.t1 MTR_5g034930 34.146 328 206 5 20 344 11 331 6.04e-54 182
MS.gene26651.t1 MTR_6g007743 31.522 368 238 7 9 373 6 362 4.13e-53 181
MS.gene26651.t1 MTR_6g007740 31.967 366 236 7 9 372 6 360 1.38e-52 182
MS.gene26651.t1 MTR_5g025340 34.513 339 208 4 15 341 10 346 2.16e-52 179
MS.gene26651.t1 MTR_5g069040 29.586 338 237 1 10 346 13 350 9.44e-52 178
MS.gene26651.t1 MTR_4g094360 33.115 305 201 2 12 315 11 313 9.66e-52 176
MS.gene26651.t1 MTR_6g007747 32.402 358 230 6 5 362 2 347 3.09e-51 176
MS.gene26651.t1 MTR_5g021160 36.111 252 159 1 92 343 1 250 5.33e-51 172
MS.gene26651.t1 MTR_3g019050 29.573 328 228 1 10 337 13 337 5.72e-51 176
MS.gene26651.t1 MTR_5g068790 29.080 337 238 1 10 346 13 348 9.68e-51 175
MS.gene26651.t1 MTR_8g006090 36.393 305 181 4 16 315 12 308 1.72e-50 172
MS.gene26651.t1 MTR_6g007757 35.455 330 201 5 35 362 32 351 1.90e-50 174
MS.gene26651.t1 MTR_5g025330 33.626 342 215 2 15 345 9 349 1.28e-49 176
MS.gene26651.t1 MTR_5g025370 33.333 342 212 4 12 339 7 346 1.33e-49 172
MS.gene26651.t1 MTR_8g006090 37.546 269 156 3 87 351 4 264 1.38e-49 169
MS.gene26651.t1 MTR_8g006050 34.884 301 176 5 44 341 23 306 1.56e-49 171
MS.gene26651.t1 MTR_5g025400 34.402 343 209 4 15 343 11 351 2.99e-49 171
MS.gene26651.t1 MTR_5g021160 37.008 254 154 2 12 265 4 251 2.99e-49 168
MS.gene26651.t1 MTR_6g007750 32.647 340 215 6 9 344 6 335 2.62e-48 168
MS.gene26651.t1 MTR_5g034970 34.146 328 197 4 19 345 11 320 9.32e-48 166
MS.gene26651.t1 MTR_5g089390 28.529 333 228 2 19 351 18 340 1.62e-47 166
MS.gene26651.t1 MTR_6g007753 34.754 305 181 6 43 344 327 616 1.99e-47 171
MS.gene26651.t1 MTR_6g007753 35.160 219 133 3 126 344 83 292 1.07e-32 130
MS.gene26651.t1 MTR_1g051120 38.756 209 124 1 6 214 7 211 3.96e-47 162
MS.gene26651.t1 MTR_1g051120 38.647 207 123 1 6 212 7 209 1.03e-46 159
MS.gene26651.t1 MTR_0103s0090 36.948 249 146 3 98 344 3 242 1.70e-46 160
MS.gene26651.t1 MTR_8g072350 30.060 336 223 2 15 339 9 343 1.86e-45 161
MS.gene26651.t1 MTR_8g092650 34.498 229 144 2 114 338 26 252 4.08e-45 157
MS.gene26651.t1 MTR_3g112480 36.957 230 136 1 123 343 1 230 5.71e-45 156
MS.gene26651.t1 MTR_4g094360 33.992 253 164 2 92 343 44 294 9.53e-45 158
MS.gene26651.t1 MTR_6g007470 86.207 87 12 0 203 289 99 185 1.93e-44 154
MS.gene26651.t1 MTR_4g094340 34.127 252 162 3 15 265 9 257 2.23e-44 155
MS.gene26651.t1 MTR_4g094340 34.127 252 162 3 15 265 27 275 4.67e-44 154
MS.gene26651.t1 MTR_6g007760 30.159 315 209 5 5 317 4 309 5.64e-44 155
MS.gene26651.t1 MTR_3g095440 33.858 254 160 3 16 264 6 256 9.83e-42 147
MS.gene26651.t1 MTR_2g102340 31.907 257 169 3 10 265 33 284 9.17e-39 142
MS.gene26651.t1 MTR_4g129650 29.752 242 159 3 112 351 1 233 1.85e-37 136
MS.gene26651.t1 MTR_8g006090 38.272 243 137 4 16 253 12 246 1.85e-36 135
MS.gene26651.t1 MTR_5g034980 33.600 250 154 5 20 265 12 253 5.94e-36 134
MS.gene26651.t1 MTR_4g094342 38.889 180 104 2 12 185 10 189 5.54e-35 130
MS.gene26651.t1 MTR_6g007757 34.061 229 141 4 35 261 32 252 4.11e-34 128
MS.gene26651.t1 MTR_4g094340 35.096 208 119 4 15 215 27 225 3.31e-33 124
MS.gene26651.t1 MTR_4g100840 28.242 347 215 11 19 348 18 347 5.61e-32 124
MS.gene26651.t1 MTR_1g068720 45.652 138 72 3 210 344 93 230 9.73e-32 120
MS.gene26651.t1 MTR_1g068720 43.590 78 44 0 11 88 10 87 5.09e-15 74.7
MS.gene26651.t1 MTR_5g012650 27.329 322 228 5 19 338 12 329 5.58e-30 118
MS.gene26651.t1 MTR_8g006090 38.596 171 93 3 87 253 4 166 4.99e-23 96.7
MS.gene26651.t1 MTR_1g014790 34.400 125 80 1 88 212 36 158 2.08e-20 89.0
MS.gene26651.t1 MTR_3g093450 28.037 214 93 6 148 352 25 186 1.04e-16 78.6
MS.gene26651.t1 MTR_4g094348 33.600 125 78 2 95 214 2 126 2.67e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26651.t1 AT5G07050 61.965 397 136 6 1 392 3 389 1.18e-172 488
MS.gene26651.t1 AT2G40900 53.083 373 162 4 12 382 7 368 3.06e-150 431
MS.gene26651.t1 AT3G56620 52.941 374 166 3 12 383 7 372 3.99e-140 404
MS.gene26651.t1 AT1G21890 50.733 341 163 1 15 350 10 350 3.04e-128 374
MS.gene26651.t1 AT4G08300 49.462 372 173 4 12 373 7 373 1.37e-124 365
MS.gene26651.t1 AT2G37460 50.588 340 156 3 12 345 11 344 2.83e-122 359
MS.gene26651.t1 AT1G44800 48.266 346 174 3 12 356 7 348 3.71e-121 356
MS.gene26651.t1 AT2G39510 47.632 359 182 3 15 372 7 360 1.57e-120 354
MS.gene26651.t1 AT1G21890 52.288 306 141 1 15 315 10 315 7.81e-115 339
MS.gene26651.t1 AT4G08290 46.588 337 175 2 1 337 1 332 1.10e-112 335
MS.gene26651.t1 AT5G13670 45.317 331 174 4 11 338 3 329 1.35e-102 308
MS.gene26651.t1 AT2G37450 42.941 340 166 3 12 350 5 317 3.87e-89 273
MS.gene26651.t1 AT1G09380 40.439 319 190 0 16 334 8 326 9.52e-86 265
MS.gene26651.t1 AT1G75500 37.396 361 217 4 12 365 16 374 2.01e-79 249
MS.gene26651.t1 AT1G75500 37.396 361 217 4 12 365 16 374 2.01e-79 249
MS.gene26651.t1 AT4G08290 42.803 264 146 2 1 264 1 259 1.26e-77 241
MS.gene26651.t1 AT3G18200 38.988 336 195 4 12 345 31 358 5.51e-77 243
MS.gene26651.t1 AT3G53210 37.500 336 201 2 12 344 6 335 5.25e-73 233
MS.gene26651.t1 AT5G64700 34.821 336 214 3 15 346 7 341 2.06e-72 231
MS.gene26651.t1 AT3G30340 36.000 325 205 1 15 339 10 331 2.23e-70 225
MS.gene26651.t1 AT1G43650 36.047 344 200 4 15 346 6 341 1.63e-67 218
MS.gene26651.t1 AT4G30420 35.311 354 207 6 15 356 8 351 7.01e-67 217
MS.gene26651.t1 AT1G25270 36.196 326 206 1 15 340 2 325 4.05e-66 214
MS.gene26651.t1 AT4G30420 35.362 345 213 4 18 356 1 341 3.84e-65 212
MS.gene26651.t1 AT2G37450 44.958 238 124 2 101 337 1 232 1.74e-64 207
MS.gene26651.t1 AT1G01070 34.278 353 224 4 1 351 1 347 1.65e-61 202
MS.gene26651.t1 AT1G68170 33.634 333 216 2 11 341 8 337 3.43e-56 189
MS.gene26651.t1 AT4G01440 31.343 335 218 2 16 346 10 336 5.75e-56 188
MS.gene26651.t1 AT1G68170 34.043 329 212 2 15 341 2 327 7.84e-56 187
MS.gene26651.t1 AT1G11450 32.258 341 224 4 12 351 12 346 3.02e-55 186
MS.gene26651.t1 AT4G28040 32.036 334 204 7 12 340 4 319 5.36e-55 185
MS.gene26651.t1 AT4G28040 32.036 334 204 7 12 340 4 319 5.36e-55 185
MS.gene26651.t1 AT4G28040 32.036 334 204 7 12 340 4 319 5.36e-55 185
MS.gene26651.t1 AT4G28040 32.036 334 204 7 12 340 4 319 5.36e-55 185
MS.gene26651.t1 AT4G28040 32.036 334 204 7 12 340 4 319 5.36e-55 185
MS.gene26651.t1 AT5G40240 31.454 337 227 4 4 338 7 341 8.78e-55 185
MS.gene26651.t1 AT5G40240 31.454 337 227 4 4 338 7 341 8.78e-55 185
MS.gene26651.t1 AT5G40240 31.765 340 227 5 2 338 18 355 1.03e-54 185
MS.gene26651.t1 AT5G40210 33.739 329 182 6 19 339 16 316 1.49e-54 184
MS.gene26651.t1 AT1G11460 33.435 329 210 3 12 337 12 334 1.50e-54 184
MS.gene26651.t1 AT5G40230 31.487 343 223 6 3 339 7 343 8.02e-53 180
MS.gene26651.t1 AT2G37450 41.964 224 123 2 128 350 61 278 5.93e-52 176
MS.gene26651.t1 AT2G37450 54.386 57 26 0 12 68 5 61 4.46e-13 69.7
MS.gene26651.t1 AT4G01430 30.588 340 230 4 12 348 5 341 7.23e-51 175
MS.gene26651.t1 AT3G53210 36.328 256 154 2 92 344 29 278 7.99e-51 173
MS.gene26651.t1 AT3G28050 30.994 342 218 8 10 345 5 334 9.52e-50 172
MS.gene26651.t1 AT5G45370 33.333 321 200 2 19 339 23 329 1.74e-49 171
MS.gene26651.t1 AT3G45870 33.846 325 207 3 15 332 11 334 2.59e-49 171
MS.gene26651.t1 AT1G01070 34.932 292 182 4 62 351 15 300 3.04e-49 169
MS.gene26651.t1 AT4G01440 30.921 304 198 2 16 315 10 305 3.23e-49 169
MS.gene26651.t1 AT1G11450 33.333 303 195 4 50 351 6 302 5.53e-49 168
MS.gene26651.t1 AT5G45370 32.229 332 213 2 19 339 23 353 2.16e-48 169
MS.gene26651.t1 AT5G45370 32.229 332 213 2 19 339 23 353 2.16e-48 169
MS.gene26651.t1 AT1G70260 29.290 338 227 3 16 345 12 345 2.93e-48 168
MS.gene26651.t1 AT3G53210 35.918 245 148 2 12 253 6 244 1.81e-47 163
MS.gene26651.t1 AT1G11450 33.000 300 194 4 53 351 2 295 2.87e-47 163
MS.gene26651.t1 AT3G18200 38.136 236 136 4 112 345 1 228 4.39e-47 161
MS.gene26651.t1 AT3G28130 32.047 337 211 7 19 345 16 344 8.46e-47 164
MS.gene26651.t1 AT3G28100 31.378 341 219 7 7 340 4 336 1.45e-46 163
MS.gene26651.t1 AT4G19185 32.635 334 213 2 17 339 22 354 1.55e-46 164
MS.gene26651.t1 AT3G30340 34.263 251 162 1 15 265 10 257 4.64e-46 160
MS.gene26651.t1 AT5G64700 32.549 255 167 3 15 265 7 260 9.48e-46 158
MS.gene26651.t1 AT4G15540 30.792 341 219 4 1 339 1 326 1.11e-45 160
MS.gene26651.t1 AT4G15540 30.792 341 219 4 1 339 1 326 1.11e-45 160
MS.gene26651.t1 AT1G11450 30.820 305 205 3 12 315 12 311 6.98e-45 157
MS.gene26651.t1 AT3G28070 35.102 245 153 4 98 340 7 247 2.21e-44 155
MS.gene26651.t1 AT3G28070 35.102 245 153 4 98 340 99 339 2.17e-43 155
MS.gene26651.t1 AT3G45870 33.117 308 198 3 15 315 11 317 4.14e-43 153
MS.gene26651.t1 AT3G28130 34.783 253 157 4 98 345 9 258 5.35e-43 151
MS.gene26651.t1 AT3G28130 34.783 253 157 4 98 345 9 258 5.35e-43 151
MS.gene26651.t1 AT5G47470 31.515 330 210 7 19 343 33 351 6.78e-42 151
MS.gene26651.t1 AT5G47470 31.515 330 210 7 19 343 61 379 1.02e-41 151
MS.gene26651.t1 AT4G01430 30.945 307 206 4 12 315 5 308 1.09e-41 149
MS.gene26651.t1 AT5G47470 31.515 330 210 7 19 343 61 379 1.30e-41 150
MS.gene26651.t1 AT4G24980 29.773 309 147 5 30 338 1 239 3.02e-41 147
MS.gene26651.t1 AT3G28080 36.475 244 147 6 100 340 9 247 1.63e-40 145
MS.gene26651.t1 AT3G28080 36.475 244 147 6 100 340 9 247 1.63e-40 145
MS.gene26651.t1 AT3G28080 36.475 244 147 6 100 340 9 247 1.63e-40 145
MS.gene26651.t1 AT3G28080 36.475 244 147 6 100 340 9 247 1.63e-40 145
MS.gene26651.t1 AT3G28080 32.622 328 207 9 19 340 17 336 1.86e-40 147
MS.gene26651.t1 AT3G28080 36.475 244 147 6 100 340 90 328 1.24e-39 144
MS.gene26651.t1 AT4G01440 31.890 254 161 2 16 265 10 255 1.46e-39 142
MS.gene26651.t1 AT1G43650 32.669 251 160 3 15 264 6 248 6.44e-39 140
MS.gene26651.t1 AT4G01450 31.875 320 201 3 28 342 21 328 1.19e-37 139
MS.gene26651.t1 AT3G45870 34.146 246 155 2 15 253 11 256 5.73e-36 133
MS.gene26651.t1 AT4G01450 30.375 293 187 3 28 315 21 301 8.86e-36 134
MS.gene26651.t1 AT1G11450 31.274 259 171 3 94 351 2 254 1.53e-35 131
MS.gene26651.t1 AT4G19185 31.395 258 165 2 93 339 20 276 2.06e-35 132
MS.gene26651.t1 AT1G60050 28.080 349 223 6 16 348 13 349 9.69e-35 132
MS.gene26651.t1 AT4G01440 30.342 234 151 2 117 346 3 228 3.30e-34 127
MS.gene26651.t1 AT4G01440 30.342 234 151 2 117 346 3 228 3.30e-34 127
MS.gene26651.t1 AT4G16620 30.921 304 197 7 46 343 41 337 9.02e-33 126
MS.gene26651.t1 AT4G01450 32.751 229 137 3 28 251 21 237 1.66e-32 123
MS.gene26651.t1 AT3G28070 33.182 220 141 4 98 315 99 314 1.97e-32 124
MS.gene26651.t1 AT4G01450 33.491 212 124 3 28 234 21 220 3.10e-30 117
MS.gene26651.t1 AT5G45370 30.677 251 162 2 100 339 2 251 3.66e-30 117
MS.gene26651.t1 AT5G45370 30.677 251 162 2 100 339 2 251 3.66e-30 117
MS.gene26651.t1 AT3G28070 32.243 214 139 4 129 340 1 210 1.17e-29 115
MS.gene26651.t1 AT3G28130 32.432 222 142 4 129 345 1 219 2.50e-29 114
MS.gene26651.t1 AT3G28080 28.528 326 169 8 19 340 17 282 1.82e-27 110
MS.gene26651.t1 AT3G28080 30.992 242 109 5 100 340 9 193 2.68e-27 108
MS.gene26651.t1 AT3G28080 33.953 215 134 6 129 340 1 210 7.94e-27 107
MS.gene26651.t1 AT3G28100 30.645 248 159 5 19 260 17 257 1.78e-26 107
MS.gene26651.t1 AT3G45870 32.547 212 135 3 128 332 49 259 1.63e-25 105
MS.gene26651.t1 AT3G28130 29.435 248 162 5 19 260 16 256 5.49e-24 100
MS.gene26651.t1 AT4G16620 30.364 247 161 5 101 343 1 240 1.51e-23 99.0
MS.gene26651.t1 AT4G16620 30.364 247 161 5 101 343 1 240 1.51e-23 99.0
MS.gene26651.t1 AT3G28100 32.663 199 122 4 19 212 17 208 4.09e-21 92.0
MS.gene26651.t1 AT5G45370 27.984 243 161 3 110 339 52 293 1.07e-20 92.4
MS.gene26651.t1 AT3G28130 31.658 199 124 4 19 212 16 207 3.66e-20 88.6
MS.gene26651.t1 AT4G01430 27.536 207 145 3 144 348 1 204 6.10e-20 88.2
MS.gene26651.t1 AT4G16620 29.208 202 135 4 46 245 41 236 1.19e-19 88.6
MS.gene26651.t1 AT3G45870 31.282 195 126 3 128 315 49 242 1.27e-19 87.8
MS.gene26651.t1 AT3G45870 31.282 195 126 3 128 315 49 242 1.27e-19 87.8
MS.gene26651.t1 AT3G45870 33.333 147 97 1 186 332 38 183 2.20e-16 78.2
MS.gene26651.t1 AT3G45870 32.061 131 82 2 130 253 4 134 1.80e-12 65.5
MS.gene26651.t1 AT3G45870 30.128 156 99 3 105 253 29 181 2.44e-12 66.2
MS.gene26651.t1 AT3G28060 28.571 154 87 5 169 315 17 154 2.67e-12 64.7

Find 78 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTACATGCTTAAACTTT+TGG 0.196211 7.2:+20070783 None:intergenic
GGAATTTAGGATGGAGAAAT+TGG 0.206523 7.2:-20072505 MS.gene26651:intron
GGCTTCTTTCTTCATCCTTC+AGG 0.230455 7.2:-20072265 MS.gene26651:intron
GCAATGATTTCTCTACAATT+TGG 0.240624 7.2:-20073308 MS.gene26651:CDS
GATGATCATTGTCGCAATTA+TGG 0.247539 7.2:-20071502 MS.gene26651:CDS
ATTTGTGACTGCAGTGTTAT+TGG 0.252494 7.2:-20071023 MS.gene26651:intron
CCTGAAAACACTACTGATTC+TGG 0.323745 7.2:-20072342 MS.gene26651:CDS
TAGGACTTTACTCAGTTCTA+TGG 0.324315 7.2:-20070983 MS.gene26651:CDS
GGAACTGTAATTACAGTTGC+TGG 0.333568 7.2:-20072447 MS.gene26651:CDS
AAATGCAGGCTGTGACATTA+AGG 0.337786 7.2:-20072160 MS.gene26651:intron
TCATAATTGCCACCTTTGCT+TGG 0.345790 7.2:-20072287 MS.gene26651:CDS
ATGTTCGTGTTGGGACTTCT+CGG 0.352905 7.2:-20073009 MS.gene26651:CDS
GTGAAGCTACTAAAGTGTTA+AGG 0.367933 7.2:-20070824 MS.gene26651:CDS
CAACCAATGCTCCAAGCATT+TGG 0.368276 7.2:+20072047 None:intergenic
TGTAGAAAATGGAGTAATAT+TGG 0.373183 7.2:-20070898 MS.gene26651:CDS
CATAATTGCCACCTTTGCTT+GGG 0.374698 7.2:-20072286 MS.gene26651:CDS
ATGAAGTGTTGTGTAGAAAA+TGG 0.377896 7.2:-20070909 MS.gene26651:CDS
GGTGAAAAGGATTGGGTTGA+AGG 0.379275 7.2:-20072321 MS.gene26651:CDS
CTGATTCTGGTGAAAAGGAT+TGG 0.390193 7.2:-20072329 MS.gene26651:CDS
CACTACTGATTCTGGTGAAA+AGG 0.391411 7.2:-20072334 MS.gene26651:CDS
ATGATCATTGTCGCAATTAT+GGG 0.399537 7.2:-20071501 MS.gene26651:CDS
AGAGAAATCATTGCTATGTA+TGG 0.403687 7.2:+20073317 None:intergenic
TAATAGCACATGAGTAGGTT+GGG 0.409987 7.2:+20072690 None:intergenic
CAGTTCCAATCACCTTTACT+TGG 0.422944 7.2:+20072463 None:intergenic
AAATGATATTGAAATGCAAA+AGG 0.427377 7.2:-20070847 MS.gene26651:CDS
AAGCCAAATGCTTGGAGCAT+TGG 0.441831 7.2:-20072050 MS.gene26651:CDS
AGATGCCAAGTAAAGGTGAT+TGG 0.445654 7.2:-20072468 MS.gene26651:CDS
GCCATGACAAATGTCATTGC+TGG 0.449617 7.2:+20072656 None:intergenic
AACATAAGAAATGTGATCCT+TGG 0.453298 7.2:+20073039 None:intergenic
TGAAGCTACTAAAGTGTTAA+GGG 0.455287 7.2:-20070823 MS.gene26651:CDS
AGGACTTTACTCAGTTCTAT+GGG 0.455974 7.2:-20070982 MS.gene26651:CDS
GATCAGAACCTATACTATGC+TGG 0.460553 7.2:-20072728 MS.gene26651:CDS
CACAGCCATAGTGTGTTCCT+TGG 0.460675 7.2:-20072114 MS.gene26651:CDS
TTGTCATTGGCAGGAAGATA+AGG 0.461420 7.2:-20073062 MS.gene26651:intron
TGTGCCCAAGGAACACACTA+TGG 0.466969 7.2:+20072109 None:intergenic
CAAATGCTTGGAGCATTGGT+TGG 0.475581 7.2:-20072046 MS.gene26651:CDS
CTCTCAAGAACAATAGCAAA+TGG 0.479507 7.2:+20073182 None:intergenic
GGAATAGTCATGCAAAAGAA+AGG 0.480743 7.2:-20071558 MS.gene26651:CDS
TGATTCTGGTGAAAAGGATT+GGG 0.481402 7.2:-20072328 MS.gene26651:CDS
AAATGCTTGGAGCATTGGTT+GGG 0.486794 7.2:-20072045 MS.gene26651:CDS
TGTTCGTGTTGGGACTTCTC+GGG 0.488097 7.2:-20073008 MS.gene26651:intron
ATTTCAACCCAGCATAGTAT+AGG 0.492882 7.2:+20072720 None:intergenic
CTAATAGCACATGAGTAGGT+TGG 0.498278 7.2:+20072689 None:intergenic
GAACAGGGTATAATATCATC+AGG 0.501590 7.2:-20071600 MS.gene26651:intron
CATTTGCTATTGTTCTTGAG+AGG 0.504801 7.2:-20073181 MS.gene26651:intron
GAACTGTAATTACAGTTGCT+GGG 0.505303 7.2:-20072446 MS.gene26651:CDS
GGTCTGACCTACTATGTTCA+AGG 0.506224 7.2:-20071579 MS.gene26651:CDS
TTTATGCAAATGTTCGTGTT+GGG 0.509361 7.2:-20073018 MS.gene26651:CDS
ACAGCCATAGTGTGTTCCTT+GGG 0.511265 7.2:-20072113 MS.gene26651:CDS
AAAATTAAGATGCCAAGTAA+AGG 0.523206 7.2:-20072475 MS.gene26651:CDS
AAGCAAAGGTGGCAATTATG+AGG 0.530606 7.2:+20072289 None:intergenic
ATCAGAACCTATACTATGCT+GGG 0.534041 7.2:-20072727 MS.gene26651:CDS
GTTTATGCAAATGTTCGTGT+TGG 0.539764 7.2:-20073019 MS.gene26651:CDS
AATGATATTGAAATGCAAAA+GGG 0.540111 7.2:-20070846 MS.gene26651:CDS
GAATAGTCATGCAAAAGAAA+GGG 0.552823 7.2:-20071557 MS.gene26651:CDS
CCCAGCAATGACATTTGTCA+TGG 0.557417 7.2:-20072657 MS.gene26651:CDS
TGGAGCATAAGCCAAATGCT+TGG 0.566635 7.2:-20072058 MS.gene26651:CDS
AATTACAGTTGCTGGGGCCA+TGG 0.571553 7.2:-20072439 MS.gene26651:CDS
ATATTGGAAACAGTGATTGA+AGG 0.577888 7.2:-20070882 MS.gene26651:CDS
GAAAGAAGCCCAAGCAAAGG+TGG 0.577910 7.2:+20072278 None:intergenic
AATTGATTGAAGTGTGCCCA+AGG 0.589839 7.2:+20072097 None:intergenic
GACTATTCCTTGAACATAGT+AGG 0.590965 7.2:+20071572 None:intergenic
AATAGCACATGAGTAGGTTG+GGG 0.594825 7.2:+20072691 None:intergenic
TATAGGTTCTGATCAATCAC+AGG 0.594938 7.2:+20072737 None:intergenic
ATTGCTAATAGCACATGAGT+AGG 0.596686 7.2:+20072685 None:intergenic
AACTGTAATTACAGTTGCTG+GGG 0.596912 7.2:-20072445 MS.gene26651:CDS
GCGACAATGATCATCATCAA+AGG 0.607473 7.2:+20071510 None:intergenic
CCATGACAAATGTCATTGCT+GGG 0.609642 7.2:+20072657 None:intergenic
TGGTATGAACATAATAACAA+AGG 0.615728 7.2:-20073279 MS.gene26651:CDS
TGAAGAAGAGACAATAACTG+AGG 0.638287 7.2:-20070934 MS.gene26651:CDS
GAAGAAGAGACAATAACTGA+GGG 0.639766 7.2:-20070933 MS.gene26651:CDS
GAACATAGTGACTCATTCCA+CGG 0.650720 7.2:+20073246 None:intergenic
GAAGAAAGAAGCCCAAGCAA+AGG 0.650903 7.2:+20072275 None:intergenic
TTGGCAGGAAGATAAGGCCA+AGG 0.651054 7.2:-20073056 MS.gene26651:intron
TTTGTATAATGTCATCACCA+TGG 0.663821 7.2:+20072422 None:intergenic
GGACTTTACTCAGTTCTATG+GGG 0.681459 7.2:-20070981 MS.gene26651:CDS
ACAAAGGTTTCACTCAACCG+TGG 0.684285 7.2:-20073263 MS.gene26651:CDS
ATGGTGATGACATTATACAA+AGG 0.703249 7.2:-20072420 MS.gene26651:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTATTTTATTTTT+TGG - chr7.2:20072764-20072783 MS.gene26651:intron 0.0%
!! AAATAAAATACTTTATGATA+TGG + chr7.2:20072723-20072742 None:intergenic 10.0%
!!! ATAAATATTAATTTGGTTAT+TGG + chr7.2:20071556-20071575 None:intergenic 10.0%
!!! ATTTTTTTTTCTACTTTTTT+TGG + chr7.2:20073021-20073040 None:intergenic 10.0%
!!! TAAATATTAATTTGGTTATT+GGG + chr7.2:20071555-20071574 None:intergenic 10.0%
!!! TTTTTTTTTCTACTTTTTTT+GGG + chr7.2:20073020-20073039 None:intergenic 10.0%
!! ATCAACAAACATAAAAAATA+GGG + chr7.2:20072499-20072518 None:intergenic 15.0%
!!! ATAAAATACTTTTTTATTGG+TGG + chr7.2:20072750-20072769 None:intergenic 15.0%
!!! TGATTGCTAATTTATTTTTT+TGG + chr7.2:20072293-20072312 None:intergenic 15.0%
!! AAATGATATTGAAATGCAAA+AGG - chr7.2:20073309-20073328 MS.gene26651:CDS 20.0%
!! AATGATATTGAAATGCAAAA+GGG - chr7.2:20073310-20073329 MS.gene26651:CDS 20.0%
!! CATCAACAAACATAAAAAAT+AGG + chr7.2:20072500-20072519 None:intergenic 20.0%
!! TTATCATTAAGAATGAATGA+TGG + chr7.2:20071004-20071023 None:intergenic 20.0%
!!! AAACATAAAAAATAGGGTTT+TGG + chr7.2:20072493-20072512 None:intergenic 20.0%
!!! AACAAATTTTAGAACATTGT+TGG + chr7.2:20071384-20071403 None:intergenic 20.0%
!!! AACATAAAAAATAGGGTTTT+GGG + chr7.2:20072492-20072511 None:intergenic 20.0%
!!! AATTTGTTATTGTTTGTATC+AGG - chr7.2:20071396-20071415 MS.gene26651:intron 20.0%
!!! AATTTTTTGTGATTAAATGC+AGG - chr7.2:20071982-20072001 MS.gene26651:intron 20.0%
!!! ATTTGATATTTTCATTGGAT+TGG + chr7.2:20072923-20072942 None:intergenic 20.0%
!!! CAAGGTTTTAATTATATTTG+TGG + chr7.2:20072899-20072918 None:intergenic 20.0%
!!! CTAGAATTTGATATTTTCAT+TGG + chr7.2:20072928-20072947 None:intergenic 20.0%
!!! TATGCTTTATTTTGGAATTT+AGG - chr7.2:20071638-20071657 MS.gene26651:intron 20.0%
!!! TTTGTTGATGAATTTATTGA+GGG - chr7.2:20072510-20072529 MS.gene26651:intron 20.0%
!!! TTTTTTGGTAGTGATTATTA+AGG + chr7.2:20072278-20072297 None:intergenic 20.0%
! AAAATTAAGATGCCAAGTAA+AGG - chr7.2:20071681-20071700 MS.gene26651:intron 25.0%
! AAGTTAAAACTTTGATAAGG+GGG + chr7.2:20072176-20072195 None:intergenic 25.0%
! ATTCTAGTGAGAAATAAACT+TGG - chr7.2:20072941-20072960 MS.gene26651:intron 25.0%
! CAAGTTAAAACTTTGATAAG+GGG + chr7.2:20072177-20072196 None:intergenic 25.0%
! CAGAAAAATTATATCTTGGA+GGG - chr7.2:20072692-20072711 MS.gene26651:CDS 25.0%
! CTTGCAGAAAAATTATATCT+TGG - chr7.2:20072688-20072707 MS.gene26651:CDS 25.0%
! GCAAGTTAAAACTTTGATAA+GGG + chr7.2:20072178-20072197 None:intergenic 25.0%
! GTTAAAAAAACTTGAAGTTC+CGG - chr7.2:20072434-20072453 MS.gene26651:CDS 25.0%
! TGCAAGTTAAAACTTTGATA+AGG + chr7.2:20072179-20072198 None:intergenic 25.0%
! TGGTATGAACATAATAACAA+AGG - chr7.2:20070877-20070896 MS.gene26651:CDS 25.0%
! TGTAGAAAATGGAGTAATAT+TGG - chr7.2:20073258-20073277 MS.gene26651:CDS 25.0%
! TTAGCAATCAAAATTAGTGA+CGG - chr7.2:20072303-20072322 MS.gene26651:CDS 25.0%
! TTGTAAGCCATTATCTATAA+CGG + chr7.2:20071272-20071291 None:intergenic 25.0%
! TTTAACAATTACATACCTGA+AGG + chr7.2:20071909-20071928 None:intergenic 25.0%
!! CAAGATATAATTTTTCTGCA+AGG + chr7.2:20072690-20072709 None:intergenic 25.0%
!! GTATTAATGGATGTAAACTT+TGG - chr7.2:20072532-20072551 MS.gene26651:intron 25.0%
!! GTTTGTTGATGAATTTATTG+AGG - chr7.2:20072509-20072528 MS.gene26651:intron 25.0%
!!! CTTTATTTTGGAATTTAGGA+TGG - chr7.2:20071642-20071661 MS.gene26651:intron 25.0%
!!! GAATTTATTGAGGGTATTAA+TGG - chr7.2:20072519-20072538 MS.gene26651:intron 25.0%
!!! GTGTTACATATGCTTTATTT+TGG - chr7.2:20071630-20071649 MS.gene26651:intron 25.0%
!!! TTTTCAGGTTCATAATTTCT+AGG + chr7.2:20071802-20071821 None:intergenic 25.0%
AACATAAGAAATGTGATCCT+TGG + chr7.2:20071120-20071139 None:intergenic 30.0%
AGAATTACGAGTATTCTTGA+AGG - chr7.2:20071190-20071209 MS.gene26651:intron 30.0%
AGAGAAATCATTGCTATGTA+TGG + chr7.2:20070842-20070861 None:intergenic 30.0%
ATATTGGAAACAGTGATTGA+AGG - chr7.2:20073274-20073293 MS.gene26651:CDS 30.0%
ATCTTGACCGTTATAGATAA+TGG - chr7.2:20071262-20071281 MS.gene26651:intron 30.0%
ATGATCATTGTCGCAATTAT+GGG - chr7.2:20072655-20072674 MS.gene26651:CDS 30.0%
CAGCATCACAATTATAATTG+TGG + chr7.2:20072840-20072859 None:intergenic 30.0%
GAATAGTCATGCAAAAGAAA+GGG - chr7.2:20072599-20072618 MS.gene26651:intron 30.0%
GCAATGATTTCTCTACAATT+TGG - chr7.2:20070848-20070867 MS.gene26651:CDS 30.0%
GCAGAAAAATTATATCTTGG+AGG - chr7.2:20072691-20072710 MS.gene26651:CDS 30.0%
TGTAAGAAATTTCGACTGTA+GGG + chr7.2:20071225-20071244 None:intergenic 30.0%
TTGTAAGAAATTTCGACTGT+AGG + chr7.2:20071226-20071245 None:intergenic 30.0%
TTTATGCAAATGTTCGTGTT+GGG - chr7.2:20071138-20071157 MS.gene26651:intron 30.0%
TTTGCGATAACAAATTAGCA+AGG + chr7.2:20072342-20072361 None:intergenic 30.0%
TTTGTATAATGTCATCACCA+TGG + chr7.2:20071737-20071756 None:intergenic 30.0%
! AAAAAAGCACAACATGTGAA+CGG - chr7.2:20073071-20073090 MS.gene26651:intron 30.0%
! AATTGCTGTGACTTTTGTTA+TGG - chr7.2:20072078-20072097 MS.gene26651:CDS 30.0%
! ATGGTGATGACATTATACAA+AGG - chr7.2:20071736-20071755 MS.gene26651:intron 30.0%
! TGAAGCTACTAAAGTGTTAA+GGG - chr7.2:20073333-20073352 MS.gene26651:CDS 30.0%
!! ATGAAGTGTTGTGTAGAAAA+TGG - chr7.2:20073247-20073266 MS.gene26651:CDS 30.0%
!! TATTTTCATTGGATTGGACA+AGG + chr7.2:20072917-20072936 None:intergenic 30.0%
!! TTTGGTAGTGATTATTAAGG+TGG + chr7.2:20072275-20072294 None:intergenic 30.0%
!!! GTAGTACAAGTTTTTTTCAG+AGG - chr7.2:20070810-20070829 MS.gene26651:CDS 30.0%
AACTGTAATTACAGTTGCTG+GGG - chr7.2:20071711-20071730 MS.gene26651:intron 35.0%
AGGACTTTACTCAGTTCTAT+GGG - chr7.2:20073174-20073193 MS.gene26651:intron 35.0%
ATCAGAACCTATACTATGCT+GGG - chr7.2:20071429-20071448 MS.gene26651:intron 35.0%
ATTGCTAATAGCACATGAGT+AGG + chr7.2:20071474-20071493 None:intergenic 35.0%
ATTTCAACCCAGCATAGTAT+AGG + chr7.2:20071439-20071458 None:intergenic 35.0%
ATTTGTGACTGCAGTGTTAT+TGG - chr7.2:20073133-20073152 MS.gene26651:intron 35.0%
CTCTCAAGAACAATAGCAAA+TGG + chr7.2:20070977-20070996 None:intergenic 35.0%
CTGAAAGCAGTAACAAAAAC+TGG + chr7.2:20072625-20072644 None:intergenic 35.0%
CTTTAGTATTGCATCACAAG+TGG - chr7.2:20072872-20072891 MS.gene26651:intron 35.0%
GAACAGGGTATAATATCATC+AGG - chr7.2:20072556-20072575 MS.gene26651:intron 35.0%
GAACTGTAATTACAGTTGCT+GGG - chr7.2:20071710-20071729 MS.gene26651:intron 35.0%
GAAGAAGAGACAATAACTGA+GGG - chr7.2:20073223-20073242 MS.gene26651:CDS 35.0%
GACTATTCCTTGAACATAGT+AGG + chr7.2:20072587-20072606 None:intergenic 35.0%
GATGATCATTGTCGCAATTA+TGG - chr7.2:20072654-20072673 MS.gene26651:CDS 35.0%
GATGTAAACTTTGGTGAACA+GGG - chr7.2:20072541-20072560 MS.gene26651:intron 35.0%
GGAATAGTCATGCAAAAGAA+AGG - chr7.2:20072598-20072617 MS.gene26651:intron 35.0%
GTTTATGCAAATGTTCGTGT+TGG - chr7.2:20071137-20071156 MS.gene26651:intron 35.0%
TAATAGCACATGAGTAGGTT+GGG + chr7.2:20071469-20071488 None:intergenic 35.0%
TAGGACTTTACTCAGTTCTA+TGG - chr7.2:20073173-20073192 MS.gene26651:intron 35.0%
TGAAGAAGAGACAATAACTG+AGG - chr7.2:20073222-20073241 MS.gene26651:CDS 35.0%
TGATTCTGGTGAAAAGGATT+GGG - chr7.2:20071828-20071847 MS.gene26651:intron 35.0%
TTTCTTACAAGCACTTCAGT+CGG - chr7.2:20071236-20071255 MS.gene26651:intron 35.0%
! CACACTCTATTTCTTGTCAT+TGG - chr7.2:20071081-20071100 MS.gene26651:intron 35.0%
! GGAATTTAGGATGGAGAAAT+TGG - chr7.2:20071651-20071670 MS.gene26651:intron 35.0%
! GTGAAGCTACTAAAGTGTTA+AGG - chr7.2:20073332-20073351 MS.gene26651:CDS 35.0%
! TATAGGTTCTGATCAATCAC+AGG + chr7.2:20071422-20071441 None:intergenic 35.0%
!! CATTTGCTATTGTTCTTGAG+AGG - chr7.2:20070975-20070994 MS.gene26651:CDS 35.0%
!! TTGTCATGGCAGTTATTTTC+AGG - chr7.2:20071513-20071532 MS.gene26651:CDS 35.0%
!!! GGAGCTATTTTGATCGTAAT+AGG - chr7.2:20073154-20073173 MS.gene26651:intron 35.0%
!!! TCATGTTTTTTCGTCCTGAA+TGG - chr7.2:20072389-20072408 MS.gene26651:CDS 35.0%
!!! TCTCTACAATTTGGTTTTGC+TGG - chr7.2:20070857-20070876 MS.gene26651:CDS 35.0%
AAATGCAGGCTGTGACATTA+AGG - chr7.2:20071996-20072015 MS.gene26651:intron 40.0%
AAGCAAAGGTGGCAATTATG+AGG + chr7.2:20071870-20071889 None:intergenic 40.0%
AATAGCACATGAGTAGGTTG+GGG + chr7.2:20071468-20071487 None:intergenic 40.0%
AATTGATTGAAGTGTGCCCA+AGG + chr7.2:20072062-20072081 None:intergenic 40.0%
AGATGCCAAGTAAAGGTGAT+TGG - chr7.2:20071688-20071707 MS.gene26651:intron 40.0%
CAGTTCCAATCACCTTTACT+TGG + chr7.2:20071696-20071715 None:intergenic 40.0%
CATAATTGCCACCTTTGCTT+GGG - chr7.2:20071870-20071889 MS.gene26651:intron 40.0%
CCATGACAAATGTCATTGCT+GGG + chr7.2:20071502-20071521 None:intergenic 40.0%
CTAATAGCACATGAGTAGGT+TGG + chr7.2:20071470-20071489 None:intergenic 40.0%
CTGATTCTGGTGAAAAGGAT+TGG - chr7.2:20071827-20071846 MS.gene26651:intron 40.0%
GAACATAGTGACTCATTCCA+CGG + chr7.2:20070913-20070932 None:intergenic 40.0%
GATCAGAACCTATACTATGC+TGG - chr7.2:20071428-20071447 MS.gene26651:intron 40.0%
GCGACAATGATCATCATCAA+AGG + chr7.2:20072649-20072668 None:intergenic 40.0%
GGAACTGTAATTACAGTTGC+TGG - chr7.2:20071709-20071728 MS.gene26651:intron 40.0%
GGACTTTACTCAGTTCTATG+GGG - chr7.2:20073175-20073194 MS.gene26651:intron 40.0%
GGATGTAAACTTTGGTGAAC+AGG - chr7.2:20072540-20072559 MS.gene26651:intron 40.0%
TATAACGACTGCAATTTCGC+CGG + chr7.2:20072456-20072475 None:intergenic 40.0%
TCACAGTCAAATGCGACTAA+TGG - chr7.2:20072236-20072255 MS.gene26651:intron 40.0%
TCATAATTGCCACCTTTGCT+TGG - chr7.2:20071869-20071888 MS.gene26651:intron 40.0%
TTGTCATTGGCAGGAAGATA+AGG - chr7.2:20071094-20071113 MS.gene26651:intron 40.0%
! CCAAAAAAGCATGTCCATTC+AGG + chr7.2:20072406-20072425 None:intergenic 40.0%
! CCAGAATCAGTAGTGTTTTC+AGG + chr7.2:20071817-20071836 None:intergenic 40.0%
! CTCTATTTCTTGTCATTGGC+AGG - chr7.2:20071085-20071104 MS.gene26651:intron 40.0%
!! AAATGCTTGGAGCATTGGTT+GGG - chr7.2:20072111-20072130 MS.gene26651:CDS 40.0%
!! CACTACTGATTCTGGTGAAA+AGG - chr7.2:20071822-20071841 MS.gene26651:intron 40.0%
!! CCTGAAAACACTACTGATTC+TGG - chr7.2:20071814-20071833 MS.gene26651:intron 40.0%
!!! CCTGAATGGACATGCTTTTT+TGG - chr7.2:20072403-20072422 MS.gene26651:CDS 40.0%
AAGCCAAATGCTTGGAGCAT+TGG - chr7.2:20072106-20072125 MS.gene26651:CDS 45.0%
ACAAAGGTTTCACTCAACCG+TGG - chr7.2:20070893-20070912 MS.gene26651:CDS 45.0%
ACAGCCATAGTGTGTTCCTT+GGG - chr7.2:20072043-20072062 MS.gene26651:CDS 45.0%
ATGTTCGTGTTGGGACTTCT+CGG - chr7.2:20071147-20071166 MS.gene26651:intron 45.0%
ATTAAGGTGGTCATCAGTCG+TGG + chr7.2:20072262-20072281 None:intergenic 45.0%
CAACCAATGCTCCAAGCATT+TGG + chr7.2:20072112-20072131 None:intergenic 45.0%
CCCAGCAATGACATTTGTCA+TGG - chr7.2:20071499-20071518 MS.gene26651:CDS 45.0%
GAAGAAAGAAGCCCAAGCAA+AGG + chr7.2:20071884-20071903 None:intergenic 45.0%
GCCATGACAAATGTCATTGC+TGG + chr7.2:20071503-20071522 None:intergenic 45.0%
GGCTTCTTTCTTCATCCTTC+AGG - chr7.2:20071891-20071910 MS.gene26651:intron 45.0%
GGTCTGACCTACTATGTTCA+AGG - chr7.2:20072577-20072596 MS.gene26651:intron 45.0%
GTGAACGGTGATAAGCACTT+TGG - chr7.2:20073086-20073105 MS.gene26651:intron 45.0%
TGGAGCATAAGCCAAATGCT+TGG - chr7.2:20072098-20072117 MS.gene26651:CDS 45.0%
!! CAAATGCTTGGAGCATTGGT+TGG - chr7.2:20072110-20072129 MS.gene26651:CDS 45.0%
!! GGTGAAAAGGATTGGGTTGA+AGG - chr7.2:20071835-20071854 MS.gene26651:intron 45.0%
!! AGATTATATAAATATTAATT+TGG + chr7.2:20071563-20071582 None:intergenic 5.0%
!!! AAAATAAAATACTTTTTTAT+TGG + chr7.2:20072753-20072772 None:intergenic 5.0%
AATTACAGTTGCTGGGGCCA+TGG - chr7.2:20071717-20071736 MS.gene26651:intron 50.0%
CACAGCCATAGTGTGTTCCT+TGG - chr7.2:20072042-20072061 MS.gene26651:CDS 50.0%
GAAAGAAGCCCAAGCAAAGG+TGG + chr7.2:20071881-20071900 None:intergenic 50.0%
TGTGCCCAAGGAACACACTA+TGG + chr7.2:20072050-20072069 None:intergenic 50.0%
TGTTCGTGTTGGGACTTCTC+GGG - chr7.2:20071148-20071167 MS.gene26651:intron 50.0%
TTGGCAGGAAGATAAGGCCA+AGG - chr7.2:20071100-20071119 MS.gene26651:intron 50.0%
GGGGGAGAGACTTACAGCAT+AGG + chr7.2:20072158-20072177 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 20070794 20073384 20070794 ID=MS.gene26651
chr7.2 mRNA 20070794 20073384 20070794 ID=MS.gene26651.t1;Parent=MS.gene26651
chr7.2 exon 20073182 20073384 20073182 ID=MS.gene26651.t1.exon1;Parent=MS.gene26651.t1
chr7.2 CDS 20073182 20073384 20073182 ID=cds.MS.gene26651.t1;Parent=MS.gene26651.t1
chr7.2 exon 20073009 20073071 20073009 ID=MS.gene26651.t1.exon2;Parent=MS.gene26651.t1
chr7.2 CDS 20073009 20073071 20073009 ID=cds.MS.gene26651.t1;Parent=MS.gene26651.t1
chr7.2 exon 20072644 20072760 20072644 ID=MS.gene26651.t1.exon3;Parent=MS.gene26651.t1
chr7.2 CDS 20072644 20072760 20072644 ID=cds.MS.gene26651.t1;Parent=MS.gene26651.t1
chr7.2 exon 20072266 20072518 20072266 ID=MS.gene26651.t1.exon4;Parent=MS.gene26651.t1
chr7.2 CDS 20072266 20072518 20072266 ID=cds.MS.gene26651.t1;Parent=MS.gene26651.t1
chr7.2 exon 20072016 20072174 20072016 ID=MS.gene26651.t1.exon5;Parent=MS.gene26651.t1
chr7.2 CDS 20072016 20072174 20072016 ID=cds.MS.gene26651.t1;Parent=MS.gene26651.t1
chr7.2 exon 20071465 20071616 20071465 ID=MS.gene26651.t1.exon6;Parent=MS.gene26651.t1
chr7.2 CDS 20071465 20071616 20071465 ID=cds.MS.gene26651.t1;Parent=MS.gene26651.t1
chr7.2 exon 20070794 20071031 20070794 ID=MS.gene26651.t1.exon7;Parent=MS.gene26651.t1
chr7.2 CDS 20070794 20071031 20070794 ID=cds.MS.gene26651.t1;Parent=MS.gene26651.t1
Gene Sequence

>MS.gene26651

ATGGAAGGAGATAGGTGTAGTACAAGTTTTTTTCAGAGGTGCAAGCCATACATAGCAATGATTTCTCTACAATTTGGTTTTGCTGGTATGAACATAATAACAAAGGTTTCACTCAACCGTGGAATGAGTCACTATGTTCTTGTTGTTTATAGACATGCTTTTGCTACTGCTGTTATTGCTCCATTTGCTATTGTTCTTGAGAGGTATCCATCATTCATTCTTAATGATAAAAAAAAAAAAAACTTTGAGAAGATCATAAGCTTAATATATTTGAATCATTTTCTCATCACACTCTATTTCTTGTCATTGGCAGGAAGATAAGGCCAAGGATCACATTTCTTATGTTTATGCAAATGTTCGTGTTGGGACTTCTCGGGTTAGTACTTTTCTCGCTCTAGAATTACGAGTATTCTTGAAGGACTCAGATTCCCTACAGTCGAAATTTCTTACAAGCACTTCAGTCGGTTCATCTTGACCGTTATAGATAATGGCTTACAACGTGATTTTGATAAATCAGAATTGTCTAGTCTAAAGTAACAGTCAAGATCACTGATTGCTTGTGTTCATTCTTAAAAATATATGTGCATCCAACAATGTTCTAAAATTTGTTATTGTTTGTATCAGGCCTGTGATTGATCAGAACCTATACTATGCTGGGTTGAAATTCACTTCCCCAACCTACTCATGTGCTATTAGCAATATTCTCCCAGCAATGACATTTGTCATGGCAGTTATTTTCAGGTATATATTTTTACATACCCAATAACCAAATTAATATTTATATAATCTCACATGTCTTAAATAATTTATTTTTTTGCTATAAATGACTTAACTTAGTGTTACATATGCTTTATTTTGGAATTTAGGATGGAGAAATTGGACATAAAAAAATTAAGATGCCAAGTAAAGGTGATTGGAACTGTAATTACAGTTGCTGGGGCCATGGTGATGACATTATACAAAGGACAAGTTATTAATATATTAAGTTCTCAATACATGCATCATCCTAGAAATTATGAACCTGAAAACACTACTGATTCTGGTGAAAAGGATTGGGTTGAAGGTTCTATTCTCCTCATAATTGCCACCTTTGCTTGGGCTTCTTTCTTCATCCTTCAGGTATGTAATTGTTAAATAAAATAAAGTGTAGAATAAAACTTAGATTATACAATTTTTGAATATTGAAATAATTTTTTGTGATTAAATGCAGGCTGTGACATTAAGGAAATATTCAGCTCAGCTCTCACTCACAGCCATAGTGTGTTCCTTGGGCACACTTCAATCAATTGCTGTGACTTTTGTTATGGAGCATAAGCCAAATGCTTGGAGCATTGGTTGGGACATGAACTTATTAGCTGCAGCCTATGCTGTAAGTCTCTCCCCCTTATCAAAGTTTTAACTTGCAGTCGCGTTTGCATCACAATTCTTTATAATACAAGAAATCACAGTCAAATGCGACTAATGGCCACGACTGATGACCACCTTAATAATCACTACCAAAAAAATAAATTAGCAATCAAAATTAGTGACGGAAACAATGAAATTCCTTGCTAATTTGTTATCGCAAAAATTAGTAACGAATTTTGAGAGAGATTTCATGTTTTTTCGTCCTGAATGGACATGCTTTTTTGGCAACAGACGTTAAAAAAACTTGAAGTTCCGGCGAAATTGCAGTCGTTATATACTTTTTTCTTTCCCAAAACCCTATTTTTTATGTTTGTTGATGAATTTATTGAGGGTATTAATGGATGTAAACTTTGGTGAACAGGGTATAATATCATCAGGTCTGACCTACTATGTTCAAGGAATAGTCATGCAAAAGAAAGGGCCAGTTTTTGTTACTGCTTTCAGTCCTTTGATGATGATCATTGTCGCAATTATGGGCACTTTCATCCTTGCAGAAAAATTATATCTTGGAGGGTAAGTCCATATCATAAAGTATTTTATTTTGCACCACCAATAAAAAAGTATTTTATTTTATTTTATTTTTTGGTCGAATAATACTTTTGAAAAAAAAAATAGTGACAAATGTGATTAATACAGCCACAATTATAATTGTGATGCTGATACATCTCAAACTTTAGTATTGCATCACAAGTGGACCACAAATATAATTAAAACCTTGTCCAATCCAATGAAAATATCAAATTCTAGTGAGAAATAAACTTGGCTTTCATGCAGTTTCTTCTCTATGCTTTTTTCTATCATTTTCTTATCGCAAAACCCAAAAAAAGTAGAAAAAAAAATTATGCACTAAAAATGAAACATCACAATCATAAAAAAGCACAACATGTGAACGGTGATAAGCACTTTGGTGTGATTATTAATTAATTAATTTAATTTGTGACTGCAGTGTTATTGGAGCTATTTTGATCGTAATAGGACTTTACTCAGTTCTATGGGGCAAAAGCAAAGAAAATAAAGAGATTGAAGAAGAGACAATAACTGAGGGAATGAAGTGTTGTGTAGAAAATGGAGTAATATTGGAAACAGTGATTGAAGGTGTTGAAGAAACAAATGATATTGAAATGCAAAAGGGTGAAGCTACTAAAGTGTTAAGGGTAGCAATTATTAGTGTTCCAAAAGTTTAA

Protein sequence

>MS.gene26651.t1

MEGDRCSTSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAIVLERKIRPRITFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNILPAMTFVMAVIFRMEKLDIKKLRCQVKVIGTVITVAGAMVMTLYKGQVINILSSQYMHHPRNYEPENTTDSGEKDWVEGSILLIIATFAWASFFILQAVTLRKYSAQLSLTAIVCSLGTLQSIAVTFVMEHKPNAWSIGWDMNLLAAAYAGIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKLYLGGVIGAILIVIGLYSVLWGKSKENKEIEEETITEGMKCCVENGVILETVIEGVEETNDIEMQKGEATKVLRVAIISVPKV