Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27186.t1 | XP_013462889.1 | 88.1 | 695 | 63 | 3 | 2 | 686 | 141 | 825 | 0.00E+00 | 1277.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27186.t1 | Q9SSE9 | 42.3 | 752 | 329 | 14 | 15 | 677 | 155 | 890 | 1.6e-158 | 561.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27186.t1 | A0A072V4L2 | 88.1 | 695 | 63 | 3 | 2 | 686 | 141 | 825 | 0.0e+00 | 1277.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene27186.t1 | TR | Jumonji |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058515 | MS.gene27186 | 0.813482 | 2.50E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27186.t1 | MTR_2g024270 | 87.914 | 695 | 64 | 3 | 2 | 686 | 141 | 825 | 0.0 | 1214 |
MS.gene27186.t1 | MTR_2g024140 | 84.435 | 681 | 94 | 1 | 2 | 682 | 21 | 689 | 0.0 | 1159 |
MS.gene27186.t1 | MTR_4g132540 | 62.140 | 729 | 217 | 9 | 2 | 684 | 155 | 870 | 0.0 | 890 |
MS.gene27186.t1 | MTR_1g114150 | 49.231 | 715 | 303 | 13 | 15 | 678 | 343 | 1048 | 0.0 | 639 |
MS.gene27186.t1 | MTR_5g065200 | 49.211 | 697 | 317 | 11 | 15 | 678 | 140 | 832 | 0.0 | 615 |
MS.gene27186.t1 | MTR_1g069565 | 48.054 | 745 | 299 | 14 | 14 | 678 | 143 | 879 | 0.0 | 611 |
MS.gene27186.t1 | MTR_1g114130 | 47.493 | 718 | 315 | 12 | 15 | 678 | 327 | 1036 | 0.0 | 601 |
MS.gene27186.t1 | MTR_1g114070 | 45.621 | 708 | 331 | 13 | 15 | 678 | 225 | 922 | 0.0 | 569 |
MS.gene27186.t1 | MTR_1g069565 | 43.516 | 802 | 308 | 16 | 14 | 678 | 143 | 936 | 0.0 | 559 |
MS.gene27186.t1 | MTR_5g047620 | 47.401 | 654 | 270 | 17 | 89 | 678 | 152 | 795 | 3.71e-179 | 531 |
MS.gene27186.t1 | MTR_2g024240 | 82.918 | 281 | 44 | 2 | 363 | 643 | 112 | 388 | 5.81e-165 | 479 |
MS.gene27186.t1 | MTR_2g024240 | 91.753 | 97 | 7 | 1 | 183 | 278 | 1 | 97 | 1.14e-51 | 184 |
MS.gene27186.t1 | MTR_1g114150 | 44.389 | 606 | 277 | 13 | 15 | 569 | 343 | 939 | 2.91e-153 | 468 |
MS.gene27186.t1 | MTR_0020s0100 | 43.106 | 631 | 295 | 19 | 77 | 663 | 81 | 691 | 2.13e-150 | 454 |
MS.gene27186.t1 | MTR_1g083120 | 35.165 | 728 | 384 | 13 | 13 | 681 | 196 | 894 | 9.76e-142 | 437 |
MS.gene27186.t1 | MTR_1g083120 | 35.165 | 728 | 384 | 13 | 13 | 681 | 213 | 911 | 4.08e-141 | 436 |
MS.gene27186.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 15 | 507 | 140 | 666 | 2.76e-129 | 404 |
MS.gene27186.t1 | MTR_7g117445 | 47.170 | 159 | 72 | 3 | 461 | 619 | 719 | 865 | 1.61e-32 | 135 |
MS.gene27186.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 15 | 507 | 140 | 666 | 4.14e-129 | 405 |
MS.gene27186.t1 | MTR_7g117445 | 51.364 | 220 | 95 | 4 | 461 | 680 | 719 | 926 | 2.56e-58 | 213 |
MS.gene27186.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 15 | 507 | 140 | 666 | 5.63e-129 | 404 |
MS.gene27186.t1 | MTR_7g117445 | 51.364 | 220 | 95 | 3 | 461 | 680 | 719 | 926 | 3.28e-58 | 212 |
MS.gene27186.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 15 | 507 | 140 | 666 | 1.34e-128 | 404 |
MS.gene27186.t1 | MTR_7g117445 | 51.364 | 220 | 95 | 3 | 461 | 680 | 719 | 926 | 3.80e-58 | 212 |
MS.gene27186.t1 | MTR_1g083120 | 34.757 | 679 | 354 | 14 | 13 | 631 | 196 | 845 | 4.88e-124 | 389 |
MS.gene27186.t1 | MTR_1g083120 | 34.880 | 668 | 347 | 13 | 13 | 621 | 196 | 834 | 1.02e-123 | 389 |
MS.gene27186.t1 | MTR_1g008060 | 42.490 | 506 | 241 | 14 | 7 | 487 | 851 | 1331 | 8.41e-112 | 370 |
MS.gene27186.t1 | MTR_1g008060 | 62.581 | 155 | 58 | 0 | 529 | 683 | 1537 | 1691 | 6.01e-56 | 207 |
MS.gene27186.t1 | MTR_1g008060 | 42.742 | 496 | 236 | 13 | 15 | 487 | 870 | 1340 | 1.08e-111 | 370 |
MS.gene27186.t1 | MTR_1g008060 | 62.581 | 155 | 58 | 0 | 529 | 683 | 1546 | 1700 | 7.45e-56 | 207 |
MS.gene27186.t1 | MTR_2g011630 | 31.496 | 762 | 422 | 14 | 13 | 682 | 205 | 958 | 1.32e-110 | 357 |
MS.gene27186.t1 | MTR_2g011630 | 31.753 | 696 | 373 | 12 | 77 | 677 | 21 | 709 | 9.59e-101 | 325 |
MS.gene27186.t1 | MTR_2g011630 | 31.753 | 696 | 373 | 12 | 77 | 677 | 53 | 741 | 1.17e-100 | 325 |
MS.gene27186.t1 | MTR_8g465700 | 80.500 | 200 | 31 | 3 | 295 | 492 | 1 | 194 | 2.91e-100 | 308 |
MS.gene27186.t1 | MTR_8g465720 | 66.138 | 189 | 13 | 3 | 509 | 687 | 18 | 165 | 6.88e-73 | 233 |
MS.gene27186.t1 | MTR_8g062940 | 34.211 | 342 | 204 | 7 | 15 | 347 | 33 | 362 | 1.48e-50 | 180 |
MS.gene27186.t1 | MTR_4g091520 | 35.621 | 306 | 173 | 4 | 219 | 505 | 648 | 948 | 5.35e-47 | 180 |
MS.gene27186.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 13 | 245 | 258 | 500 | 1.25e-31 | 132 |
MS.gene27186.t1 | MTR_4g091520 | 35.621 | 306 | 173 | 4 | 219 | 505 | 683 | 983 | 6.38e-47 | 179 |
MS.gene27186.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 13 | 245 | 258 | 500 | 1.22e-31 | 132 |
MS.gene27186.t1 | MTR_4g091520 | 35.621 | 306 | 173 | 4 | 219 | 505 | 718 | 1018 | 6.98e-47 | 179 |
MS.gene27186.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 13 | 245 | 258 | 500 | 1.70e-31 | 132 |
MS.gene27186.t1 | MTR_4g091520 | 35.621 | 306 | 173 | 4 | 219 | 505 | 718 | 1018 | 7.27e-47 | 179 |
MS.gene27186.t1 | MTR_4g091520 | 43.005 | 193 | 92 | 3 | 505 | 680 | 1087 | 1278 | 5.69e-41 | 161 |
MS.gene27186.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 13 | 245 | 258 | 500 | 2.11e-31 | 132 |
MS.gene27186.t1 | MTR_0295s0020 | 48.101 | 158 | 82 | 0 | 353 | 510 | 9 | 166 | 4.61e-45 | 159 |
MS.gene27186.t1 | MTR_8g013920 | 63.218 | 87 | 28 | 2 | 390 | 476 | 40 | 122 | 1.50e-28 | 113 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27186.t1 | AT1G11950 | 55.233 | 688 | 284 | 8 | 12 | 681 | 190 | 871 | 0.0 | 773 |
MS.gene27186.t1 | AT1G11950 | 55.233 | 688 | 284 | 8 | 12 | 681 | 190 | 871 | 0.0 | 773 |
MS.gene27186.t1 | AT1G62310 | 55.539 | 677 | 277 | 6 | 9 | 662 | 203 | 878 | 0.0 | 754 |
MS.gene27186.t1 | AT1G11950 | 52.913 | 618 | 267 | 8 | 12 | 611 | 190 | 801 | 0.0 | 657 |
MS.gene27186.t1 | AT3G07610 | 47.590 | 498 | 215 | 9 | 213 | 679 | 410 | 892 | 1.73e-139 | 434 |
MS.gene27186.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 15 | 197 | 155 | 340 | 8.72e-37 | 148 |
MS.gene27186.t1 | AT3G07610 | 44.874 | 517 | 223 | 10 | 213 | 679 | 410 | 914 | 3.55e-130 | 410 |
MS.gene27186.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 15 | 197 | 155 | 340 | 8.30e-37 | 148 |
MS.gene27186.t1 | AT4G00990 | 42.043 | 509 | 256 | 12 | 14 | 497 | 79 | 573 | 4.06e-120 | 377 |
MS.gene27186.t1 | AT4G00990 | 63.636 | 88 | 32 | 0 | 532 | 619 | 683 | 770 | 1.15e-29 | 125 |
MS.gene27186.t1 | AT4G00990 | 42.043 | 509 | 256 | 12 | 14 | 497 | 79 | 573 | 5.02e-120 | 377 |
MS.gene27186.t1 | AT4G00990 | 59.375 | 96 | 39 | 0 | 532 | 627 | 683 | 778 | 1.72e-30 | 128 |
MS.gene27186.t1 | AT4G00990 | 42.043 | 509 | 256 | 12 | 14 | 497 | 79 | 573 | 6.62e-120 | 378 |
MS.gene27186.t1 | AT4G00990 | 57.516 | 153 | 65 | 0 | 532 | 684 | 683 | 835 | 1.01e-52 | 196 |
MS.gene27186.t1 | AT1G09060 | 32.493 | 714 | 409 | 13 | 15 | 681 | 206 | 893 | 3.62e-115 | 368 |
MS.gene27186.t1 | AT1G09060 | 32.493 | 714 | 409 | 13 | 15 | 681 | 206 | 893 | 3.62e-115 | 368 |
MS.gene27186.t1 | AT1G09060 | 32.493 | 714 | 409 | 13 | 15 | 681 | 220 | 907 | 3.67e-115 | 368 |
MS.gene27186.t1 | AT1G09060 | 32.493 | 714 | 409 | 13 | 15 | 681 | 220 | 907 | 3.67e-115 | 368 |
MS.gene27186.t1 | AT4G21430 | 28.630 | 730 | 425 | 18 | 15 | 685 | 227 | 919 | 1.34e-83 | 283 |
MS.gene27186.t1 | AT3G07610 | 41.581 | 291 | 140 | 6 | 213 | 483 | 410 | 690 | 6.66e-59 | 212 |
MS.gene27186.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 15 | 197 | 155 | 340 | 1.73e-36 | 147 |
Find 123 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGTTATACCTTGTATTT+TGG | 0.175006 | 2.1:-64933630 | None:intergenic |
CCACAACCACCTAGTTCTTT+TGG | 0.232816 | 2.1:-64934261 | None:intergenic |
ATAAGTATGCCTAAATTCTT+TGG | 0.242870 | 2.1:-64935462 | None:intergenic |
CATATTTCAAAGGAACATTT+AGG | 0.255943 | 2.1:-64934039 | None:intergenic |
GATATCTCCAATTGACATAT+TGG | 0.276410 | 2.1:-64933314 | None:intergenic |
TCTCTTGCCCTGTGATTCTT+AGG | 0.277632 | 2.1:-64936032 | None:intergenic |
AGGAATGTTGGATAATATAT+TGG | 0.300780 | 2.1:+64932958 | None:intergenic |
GAGGGTCTTGTTCAAGATAA+TGG | 0.306737 | 2.1:+64935326 | MS.gene27186:CDS |
ATATCTCCAATTGACATATT+GGG | 0.312488 | 2.1:-64933313 | None:intergenic |
TTACTTGTATCACAAGTTAT+TGG | 0.332796 | 2.1:-64934171 | None:intergenic |
GAAAACACTCCAAAGAATTT+AGG | 0.338721 | 2.1:+64935453 | MS.gene27186:CDS |
AGATGGGAGGATATCTAAAT+TGG | 0.352006 | 2.1:+64934317 | MS.gene27186:CDS |
AAGAAGCTAGAGGAAGAGTT+TGG | 0.361005 | 2.1:+64935638 | MS.gene27186:CDS |
TGACCAAGTTGTTAAAGAAT+TGG | 0.364202 | 2.1:+64936205 | MS.gene27186:CDS |
ATCACTATTCACATTCCATT+TGG | 0.366620 | 2.1:-64934220 | None:intergenic |
AGAAACAGCTGGTGCACTTT+GGG | 0.368153 | 2.1:+64935385 | MS.gene27186:CDS |
CTTCCAATTCTTTAACAACT+TGG | 0.368676 | 2.1:-64936208 | None:intergenic |
CAGATGTCAAGTGACCTTAT+AGG | 0.384738 | 2.1:+64934447 | MS.gene27186:CDS |
AGTTGCCACCAAATGTTATA+AGG | 0.385343 | 2.1:+64934994 | MS.gene27186:CDS |
TCCTCTGCCAAGCTCTTCTC+TGG | 0.390375 | 2.1:-64935054 | None:intergenic |
GACACTCGCCAGTTCTTTGA+AGG | 0.395120 | 2.1:+64934795 | MS.gene27186:CDS |
AAAGAATTGGAAGCTTTCAT+TGG | 0.399008 | 2.1:+64936218 | MS.gene27186:CDS |
TTGTGATACAAGTAATTTAG+AGG | 0.403494 | 2.1:+64934179 | MS.gene27186:CDS |
ATTGCAATTCTTACGGCAAA+AGG | 0.411110 | 2.1:-64933350 | None:intergenic |
GTTTAAGATGTATTAAAGAT+TGG | 0.412154 | 2.1:+64933169 | MS.gene27186:CDS |
GTTGGGAGCCAATGGTTACT+TGG | 0.413326 | 2.1:+64934556 | MS.gene27186:CDS |
AGAACGTCAAATATTAGAAT+AGG | 0.416132 | 2.1:-64934513 | None:intergenic |
ATTTAGGACAGCTTCTATAA+AGG | 0.417061 | 2.1:-64934023 | None:intergenic |
CATTGCAATTGCAATTCTTA+CGG | 0.420522 | 2.1:-64933357 | None:intergenic |
TTATCATGACATGGAGTTTG+TGG | 0.423540 | 2.1:-64933755 | None:intergenic |
CTTTATAACCTTCAAAGAAC+TGG | 0.427941 | 2.1:-64934803 | None:intergenic |
TGTACAGGCTATTGATTGCT+TGG | 0.428553 | 2.1:+64934632 | MS.gene27186:CDS |
GAGCACATAAGGCTCAAGAT+AGG | 0.434348 | 2.1:+64935300 | MS.gene27186:CDS |
AAGTCAGGCCTTATAACATT+TGG | 0.438608 | 2.1:-64935002 | None:intergenic |
CACCGTTCCTCCAATACTCT+TGG | 0.440918 | 2.1:-64934488 | None:intergenic |
ACTTTGCAGTATCTTCTCTT+CGG | 0.452091 | 2.1:-64935415 | None:intergenic |
CAGAAACAGCTGGTGCACTT+TGG | 0.453707 | 2.1:+64935384 | MS.gene27186:CDS |
ATGTTGAGATATTTACCAAA+TGG | 0.459203 | 2.1:+64934205 | MS.gene27186:CDS |
TATTTAAATTCCAAGAGTAT+TGG | 0.460840 | 2.1:+64934478 | MS.gene27186:CDS |
AATTTAGATATCCTCCCATC+TGG | 0.461007 | 2.1:-64934315 | None:intergenic |
GTATTTCTTTGCAACAACTA+AGG | 0.462093 | 2.1:-64934062 | None:intergenic |
AATGTTTGCTTGTGTTCAAA+AGG | 0.473646 | 2.1:+64933376 | MS.gene27186:CDS |
AGGTACCCCAATATGTCAAT+TGG | 0.473897 | 2.1:+64933307 | MS.gene27186:intron |
GGATCGCAATACTCTTGAAA+TGG | 0.475406 | 2.1:-64934942 | None:intergenic |
TTAAATTCCAAGAGTATTGG+AGG | 0.475955 | 2.1:+64934481 | MS.gene27186:CDS |
AAATGATAATTCAAATGTAC+AGG | 0.476218 | 2.1:+64934617 | MS.gene27186:CDS |
TTGCAATTCTTACGGCAAAA+GGG | 0.477440 | 2.1:-64933349 | None:intergenic |
TTATTGTTCTCCAGTAAAAG+AGG | 0.483787 | 2.1:+64935481 | MS.gene27186:CDS |
GTAGTAAATTAATCATATAT+CGG | 0.484803 | 2.1:-64933553 | None:intergenic |
GACGTTCTCAAACAAGGGAC+AGG | 0.489842 | 2.1:+64934528 | MS.gene27186:CDS |
GTTCTTTGAAGGTTATAAAG+AGG | 0.497551 | 2.1:+64934806 | MS.gene27186:CDS |
TTTGTGATAGATGGCACAAA+AGG | 0.498165 | 2.1:-64935353 | None:intergenic |
GTCGACTTCCTAAGAATCAC+AGG | 0.505039 | 2.1:+64936024 | MS.gene27186:CDS |
ACACCTTCAGATTTCTCACT+TGG | 0.506166 | 2.1:-64935813 | None:intergenic |
GTGTTCAAAAGGAATGATCA+AGG | 0.509692 | 2.1:+64933387 | MS.gene27186:CDS |
AACAAGGGACAGGATTGAGT+TGG | 0.510060 | 2.1:+64934538 | MS.gene27186:CDS |
ACAAACTCCATGTCATGATA+AGG | 0.516847 | 2.1:+64933757 | MS.gene27186:CDS |
ATGTCATCAGTGCTTGAGAA+AGG | 0.520090 | 2.1:+64933101 | MS.gene27186:CDS |
TGGTTGTGGTGGCTGTGTGA+TGG | 0.522574 | 2.1:+64934275 | MS.gene27186:CDS |
AGGATTGAGTTGGGAGCCAA+TGG | 0.523462 | 2.1:+64934548 | MS.gene27186:CDS |
TTCAGATTTCTCACTTGGTG+AGG | 0.524957 | 2.1:-64935808 | None:intergenic |
AGCACATAAGGCTCAAGATA+GGG | 0.524973 | 2.1:+64935301 | MS.gene27186:CDS |
GAGTATTGCGATCCTCGAGC+TGG | 0.528942 | 2.1:+64934951 | MS.gene27186:CDS |
TCAGGCCTTATAACATTTGG+TGG | 0.529368 | 2.1:-64934999 | None:intergenic |
GTATCACAAGTTATTGGTAG+AGG | 0.529567 | 2.1:-64934165 | None:intergenic |
ACAAGGGACAGGATTGAGTT+GGG | 0.531143 | 2.1:+64934539 | MS.gene27186:CDS |
TCAGATTTCTCACTTGGTGA+GGG | 0.534163 | 2.1:-64935807 | None:intergenic |
ATGATAAGGAGCGTATGTAT+TGG | 0.537974 | 2.1:+64933771 | MS.gene27186:CDS |
ACCAGAGAAGAGCTTGGCAG+AGG | 0.538284 | 2.1:+64935053 | MS.gene27186:CDS |
CTGAAGCGCATTCTTCCAGA+TGG | 0.539199 | 2.1:+64934300 | MS.gene27186:CDS |
ATATTTGACGTTCTCAAACA+AGG | 0.544534 | 2.1:+64934522 | MS.gene27186:CDS |
CTTTGTGTCACCAGAAAATG+TGG | 0.546636 | 2.1:+64935971 | MS.gene27186:CDS |
TGCAATTCTTACGGCAAAAG+GGG | 0.547428 | 2.1:-64933348 | None:intergenic |
GAGATTGAAGCCAAAATACA+AGG | 0.547821 | 2.1:+64933620 | MS.gene27186:CDS |
ACTTGGTGAGGGCATCCAGC+AGG | 0.549347 | 2.1:-64935796 | None:intergenic |
AATGTTATAAGGCCTGACTT+AGG | 0.554124 | 2.1:+64935005 | MS.gene27186:CDS |
TTCTTTGAAGGTTATAAAGA+GGG | 0.554859 | 2.1:+64934807 | MS.gene27186:CDS |
TTCCAAGAGTATTGGAGGAA+CGG | 0.556361 | 2.1:+64934486 | MS.gene27186:CDS |
TATTTGACGTTCTCAAACAA+GGG | 0.560423 | 2.1:+64934523 | MS.gene27186:CDS |
CCAAAAGAACTAGGTGGTTG+TGG | 0.561255 | 2.1:+64934261 | MS.gene27186:CDS |
ACAACTAAGGCATATTTCAA+AGG | 0.561651 | 2.1:-64934049 | None:intergenic |
AATGCTCTCCAAGTAACCAT+TGG | 0.575828 | 2.1:-64934564 | None:intergenic |
TGAAACTTCATTTCAAAGCG+TGG | 0.577340 | 2.1:-64934102 | None:intergenic |
TGATTGCTTGGCTAGTTGTG+AGG | 0.579197 | 2.1:+64934644 | MS.gene27186:CDS |
TAACAACTTGGTCAACAGCA+TGG | 0.580070 | 2.1:-64936196 | None:intergenic |
AGATGCTCAAGCTAAAAGAC+TGG | 0.588373 | 2.1:+64934856 | MS.gene27186:CDS |
TAAGGCTCAAGATAGGGAAG+AGG | 0.594993 | 2.1:+64935307 | MS.gene27186:CDS |
AAATGGAATGTGAATAGTGA+TGG | 0.595578 | 2.1:+64934222 | MS.gene27186:CDS |
TTGGTGGCAACTTTGCAGCA+AGG | 0.598809 | 2.1:-64934983 | None:intergenic |
AACGGATAAACTCGTCACAA+TGG | 0.599920 | 2.1:-64934914 | None:intergenic |
AAAGATACATCAGAAACAGC+TGG | 0.604136 | 2.1:+64935374 | MS.gene27186:CDS |
GGTATCTCAATCTCTGAACA+TGG | 0.604496 | 2.1:-64933734 | None:intergenic |
GAAGCAGTATTTATACCTGC+TGG | 0.606997 | 2.1:+64935781 | MS.gene27186:CDS |
TAAGGTCACTTGACATCTGA+CGG | 0.610508 | 2.1:-64934443 | None:intergenic |
TATCTCCAATTGACATATTG+GGG | 0.611778 | 2.1:-64933312 | None:intergenic |
TATGGAACCAGAGAAGAGCT+TGG | 0.615802 | 2.1:+64935047 | MS.gene27186:CDS |
TGTGATACAAGTAATTTAGA+GGG | 0.619079 | 2.1:+64934180 | MS.gene27186:CDS |
AAAACAAAAGAATGTTGAGA+CGG | 0.619556 | 2.1:+64934383 | MS.gene27186:CDS |
AAGGCTCAAGATAGGGAAGA+GGG | 0.620022 | 2.1:+64935308 | MS.gene27186:CDS |
AGTTTCTGCTCAAAAGTCAA+AGG | 0.620576 | 2.1:-64935754 | None:intergenic |
TTTGTACAAGATACAAATTG+TGG | 0.620905 | 2.1:-64933129 | None:intergenic |
TGAGCATAAGAAGAAGCTAG+AGG | 0.629510 | 2.1:+64935628 | MS.gene27186:CDS |
GAATGTGCTCCAAAAGAACT+AGG | 0.632610 | 2.1:+64934252 | MS.gene27186:CDS |
TCACCAAGTGAGAAATCTGA+AGG | 0.633939 | 2.1:+64935810 | MS.gene27186:CDS |
ATCAGTGCTTGAGAAAGGAT+AGG | 0.639946 | 2.1:+64933106 | MS.gene27186:CDS |
CCATTGTGATATTGCAGACG+CGG | 0.646331 | 2.1:+64935094 | MS.gene27186:CDS |
AGCGCATTCTTCCAGATGGG+AGG | 0.648445 | 2.1:+64934304 | MS.gene27186:CDS |
ACTCTTGAAATGGCAAACAA+CGG | 0.653289 | 2.1:-64934932 | None:intergenic |
TGAAGCGCATTCTTCCAGAT+GGG | 0.654134 | 2.1:+64934301 | MS.gene27186:CDS |
ATACGCTCCTTATCATGACA+TGG | 0.656480 | 2.1:-64933764 | None:intergenic |
AGGTTGAGAATTCCAGCTCG+AGG | 0.678355 | 2.1:-64934963 | None:intergenic |
CCGCGTCTGCAATATCACAA+TGG | 0.685598 | 2.1:-64935094 | None:intergenic |
TGTTGCAAAGAAATACGCAA+CGG | 0.692822 | 2.1:+64934069 | MS.gene27186:CDS |
GGTCTTGTTCAAGATAATGG+AGG | 0.703775 | 2.1:+64935329 | MS.gene27186:CDS |
AAAGAACTAGGTGGTTGTGG+TGG | 0.707130 | 2.1:+64934264 | MS.gene27186:CDS |
AGAGGTGATGAATACATGCA+TGG | 0.707440 | 2.1:+64934135 | MS.gene27186:CDS |
ATAAACTCGTCACAATGGCG+CGG | 0.715284 | 2.1:-64934909 | None:intergenic |
TCGACTTCCTAAGAATCACA+GGG | 0.715729 | 2.1:+64936025 | MS.gene27186:CDS |
CAATTGGAGATATCGCAGAG+AGG | 0.732707 | 2.1:+64933323 | MS.gene27186:CDS |
GGCAAGAGAAGACAAACTTG+AGG | 0.737690 | 2.1:+64936046 | MS.gene27186:CDS |
AAATTGGTAACAAAAGCTCG+CGG | 0.750601 | 2.1:+64934333 | MS.gene27186:CDS |
TGTGCTCCAAAAGAACTAGG+TGG | 0.792037 | 2.1:+64934255 | MS.gene27186:CDS |
GGTGATGAATACATGCATGG+TGG | 0.798300 | 2.1:+64934138 | MS.gene27186:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTATTGTGTTTATTTAT+GGG | + | chr2.1:64936126-64936145 | MS.gene27186:intron | 10.0% |
!! | TTAATTATTGTGTTTATTTA+TGG | + | chr2.1:64936125-64936144 | MS.gene27186:intron | 10.0% |
!! | TTATAAAGAGAAATAAATAT+TGG | - | chr2.1:64934756-64934775 | None:intergenic | 10.0% |
!! | AATTATTGTGTTTATTTATG+GGG | + | chr2.1:64936127-64936146 | MS.gene27186:intron | 15.0% |
!! | AATTTGTGTTAAATAATTAC+AGG | + | chr2.1:64933056-64933075 | MS.gene27186:intron | 15.0% |
!! | GTAGTAAATTAATCATATAT+CGG | - | chr2.1:64933556-64933575 | None:intergenic | 15.0% |
!!! | TCTTTTGTATTTTGTTTTTT+TGG | + | chr2.1:64933968-64933987 | MS.gene27186:intron | 15.0% |
!! | AAATGATAATTCAAATGTAC+AGG | + | chr2.1:64934617-64934636 | MS.gene27186:CDS | 20.0% |
!! | AAGTTTCAATACAAAAATAG+AGG | + | chr2.1:64934117-64934136 | MS.gene27186:CDS | 20.0% |
!! | ATTATTGTGTTTATTTATGG+GGG | + | chr2.1:64936128-64936147 | MS.gene27186:intron | 20.0% |
!! | CAAAAGTCAAATAAAAACAT+TGG | - | chr2.1:64935610-64935629 | None:intergenic | 20.0% |
!! | CATTAGAGAAACAAATTTAA+GGG | - | chr2.1:64933437-64933456 | None:intergenic | 20.0% |
!! | GAAGAAGATATAAAAATTTC+TGG | + | chr2.1:64934829-64934848 | MS.gene27186:CDS | 20.0% |
!! | GATTCTTAATCAATTATTAC+AGG | + | chr2.1:64935724-64935743 | MS.gene27186:intron | 20.0% |
!! | TCATTAGAGAAACAAATTTA+AGG | - | chr2.1:64933438-64933457 | None:intergenic | 20.0% |
!!! | AAAAATAAAAAGAGCACATA+AGG | + | chr2.1:64935289-64935308 | MS.gene27186:CDS | 20.0% |
!!! | ACATGTTTTGATATTTTGTT+TGG | - | chr2.1:64933085-64933104 | None:intergenic | 20.0% |
!!! | GTTTAAGATGTATTAAAGAT+TGG | + | chr2.1:64933169-64933188 | MS.gene27186:CDS | 20.0% |
!!! | TAAATAGCTTTTTTCCTATA+AGG | - | chr2.1:64934464-64934483 | None:intergenic | 20.0% |
!!! | TAAATTTTCCAAACTATTAC+TGG | + | chr2.1:64933870-64933889 | MS.gene27186:intron | 20.0% |
!!! | TAATAAAATACCTCTTTTAC+TGG | - | chr2.1:64935494-64935513 | None:intergenic | 20.0% |
!!! | TATTGTTCAATAATTTTGAC+AGG | + | chr2.1:64935205-64935224 | MS.gene27186:intron | 20.0% |
!!! | TATTTAAATTCCAAGAGTAT+TGG | + | chr2.1:64934478-64934497 | MS.gene27186:CDS | 20.0% |
!!! | TCACATATAATCAACATTTT+CGG | + | chr2.1:64935514-64935533 | MS.gene27186:intron | 20.0% |
!!! | TTTTTTTCATTTTTGCACAT+AGG | + | chr2.1:64933287-64933306 | MS.gene27186:intron | 20.0% |
! | AAAACAAAAGAATGTTGAGA+CGG | + | chr2.1:64934383-64934402 | MS.gene27186:CDS | 25.0% |
! | AACCAAAATAGTTGTCATAA+AGG | - | chr2.1:64933013-64933032 | None:intergenic | 25.0% |
! | AGAACGTCAAATATTAGAAT+AGG | - | chr2.1:64934516-64934535 | None:intergenic | 25.0% |
! | ATAAGTATGCCTAAATTCTT+TGG | - | chr2.1:64935465-64935484 | None:intergenic | 25.0% |
! | ATATCTCCAATTGACATATT+GGG | - | chr2.1:64933316-64933335 | None:intergenic | 25.0% |
! | ATATGAGAGTTTATTGTTAG+TGG | - | chr2.1:64933706-64933725 | None:intergenic | 25.0% |
! | ATGTTGAGATATTTACCAAA+TGG | + | chr2.1:64934205-64934224 | MS.gene27186:CDS | 25.0% |
! | CACAATAATTAAGCAAAGTT+TGG | - | chr2.1:64936117-64936136 | None:intergenic | 25.0% |
! | CATATTTCAAAGGAACATTT+AGG | - | chr2.1:64934042-64934061 | None:intergenic | 25.0% |
! | TAAAAACATTGGTCATGAAT+AGG | - | chr2.1:64935599-64935618 | None:intergenic | 25.0% |
! | TAACAATAAACTCTCATATC+AGG | + | chr2.1:64933707-64933726 | MS.gene27186:intron | 25.0% |
! | TATCGTAGTTAAATTTCCTT+TGG | + | chr2.1:64934672-64934691 | MS.gene27186:intron | 25.0% |
! | TATTAACAAATATGTGACCT+TGG | - | chr2.1:64933225-64933244 | None:intergenic | 25.0% |
! | TCAAAAATTAAGCAAAGAGA+TGG | - | chr2.1:64933581-64933600 | None:intergenic | 25.0% |
! | TGCAACATAGTAAGTATAAA+AGG | - | chr2.1:64933815-64933834 | None:intergenic | 25.0% |
! | TGTGATACAAGTAATTTAGA+GGG | + | chr2.1:64934180-64934199 | MS.gene27186:CDS | 25.0% |
! | TTACTTGTATCACAAGTTAT+TGG | - | chr2.1:64934174-64934193 | None:intergenic | 25.0% |
! | TTGTGATACAAGTAATTTAG+AGG | + | chr2.1:64934179-64934198 | MS.gene27186:CDS | 25.0% |
! | TTTCAATTTCAACGCTATAT+TGG | + | chr2.1:64935149-64935168 | MS.gene27186:intron | 25.0% |
! | TTTGTACAAGATACAAATTG+TGG | - | chr2.1:64933132-64933151 | None:intergenic | 25.0% |
!! | ACATTTTCAAACTCATCATA+AGG | - | chr2.1:64934885-64934904 | None:intergenic | 25.0% |
!! | GTGATATTTTTCTATGAAAC+AGG | + | chr2.1:64936157-64936176 | MS.gene27186:intron | 25.0% |
!! | TGAAGTTATACCTTGTATTT+TGG | - | chr2.1:64933633-64933652 | None:intergenic | 25.0% |
!! | TTCCTTTATGACAACTATTT+TGG | + | chr2.1:64933008-64933027 | MS.gene27186:intron | 25.0% |
!! | TTCTTTGAAGGTTATAAAGA+GGG | + | chr2.1:64934807-64934826 | MS.gene27186:CDS | 25.0% |
!!! | ACATACATGTACTTTTAAAG+AGG | - | chr2.1:64935859-64935878 | None:intergenic | 25.0% |
!!! | TATTTTGACTCATATAACTG+AGG | + | chr2.1:64935232-64935251 | MS.gene27186:CDS | 25.0% |
AAAGAATTGGAAGCTTTCAT+TGG | + | chr2.1:64936218-64936237 | MS.gene27186:CDS | 30.0% | |
AAATGGAATGTGAATAGTGA+TGG | + | chr2.1:64934222-64934241 | MS.gene27186:CDS | 30.0% | |
AACCTAAGAAACAAAGAAGT+TGG | - | chr2.1:64935570-64935589 | None:intergenic | 30.0% | |
AATGTTTGCTTGTGTTCAAA+AGG | + | chr2.1:64933376-64933395 | MS.gene27186:CDS | 30.0% | |
ACAACTAAGGCATATTTCAA+AGG | - | chr2.1:64934052-64934071 | None:intergenic | 30.0% | |
ACATCTAAATAACCATTCCA+AGG | + | chr2.1:64933205-64933224 | MS.gene27186:intron | 30.0% | |
ATATTTGACGTTCTCAAACA+AGG | + | chr2.1:64934522-64934541 | MS.gene27186:CDS | 30.0% | |
ATCACTATTCACATTCCATT+TGG | - | chr2.1:64934223-64934242 | None:intergenic | 30.0% | |
CATTGCAATTGCAATTCTTA+CGG | - | chr2.1:64933360-64933379 | None:intergenic | 30.0% | |
CCAAAAACTTACATTGCTTA+TGG | + | chr2.1:64935029-64935048 | MS.gene27186:CDS | 30.0% | |
CTTCCAATTCTTTAACAACT+TGG | - | chr2.1:64936211-64936230 | None:intergenic | 30.0% | |
CTTTATAACCTTCAAAGAAC+TGG | - | chr2.1:64934806-64934825 | None:intergenic | 30.0% | |
GAAAACACTCCAAAGAATTT+AGG | + | chr2.1:64935453-64935472 | MS.gene27186:CDS | 30.0% | |
GATATCTCCAATTGACATAT+TGG | - | chr2.1:64933317-64933336 | None:intergenic | 30.0% | |
GTATTTCTTTGCAACAACTA+AGG | - | chr2.1:64934065-64934084 | None:intergenic | 30.0% | |
TATCTCCAATTGACATATTG+GGG | - | chr2.1:64933315-64933334 | None:intergenic | 30.0% | |
TATTTGACGTTCTCAAACAA+GGG | + | chr2.1:64934523-64934542 | MS.gene27186:CDS | 30.0% | |
TGACCAAGTTGTTAAAGAAT+TGG | + | chr2.1:64936205-64936224 | MS.gene27186:CDS | 30.0% | |
TGGAATTCACATCAAAAGAA+AGG | - | chr2.1:64936097-64936116 | None:intergenic | 30.0% | |
TTATTGTTCTCCAGTAAAAG+AGG | + | chr2.1:64935481-64935500 | MS.gene27186:CDS | 30.0% | |
TTCTCTTTATAAACCTTTGC+AGG | + | chr2.1:64934764-64934783 | MS.gene27186:intron | 30.0% | |
! | ATGCATATATCCACATTTTC+TGG | - | chr2.1:64935984-64936003 | None:intergenic | 30.0% |
! | ATTTAGGACAGCTTCTATAA+AGG | - | chr2.1:64934026-64934045 | None:intergenic | 30.0% |
! | CCATAAGCAATGTAAGTTTT+TGG | - | chr2.1:64935032-64935051 | None:intergenic | 30.0% |
! | GATGTATCTTTTGTGATAGA+TGG | - | chr2.1:64935365-64935384 | None:intergenic | 30.0% |
! | GTTCTTTGAAGGTTATAAAG+AGG | + | chr2.1:64934806-64934825 | MS.gene27186:CDS | 30.0% |
! | TTTTCAAACTCATCATAAGG+TGG | - | chr2.1:64934882-64934901 | None:intergenic | 30.0% |
!! | TTAAATTCCAAGAGTATTGG+AGG | + | chr2.1:64934481-64934500 | MS.gene27186:CDS | 30.0% |
AAAGATACATCAGAAACAGC+TGG | + | chr2.1:64935374-64935393 | MS.gene27186:CDS | 35.0% | |
AATGTTATAAGGCCTGACTT+AGG | + | chr2.1:64935005-64935024 | MS.gene27186:CDS | 35.0% | |
AATTTAGATATCCTCCCATC+TGG | - | chr2.1:64934318-64934337 | None:intergenic | 35.0% | |
ACAAACTCCATGTCATGATA+AGG | + | chr2.1:64933757-64933776 | MS.gene27186:CDS | 35.0% | |
ACAAATATGTGACCTTGGAA+TGG | - | chr2.1:64933220-64933239 | None:intergenic | 35.0% | |
ACTCTTGAAATGGCAAACAA+CGG | - | chr2.1:64934935-64934954 | None:intergenic | 35.0% | |
ACTTTGCAGTATCTTCTCTT+CGG | - | chr2.1:64935418-64935437 | None:intergenic | 35.0% | |
AGATGGGAGGATATCTAAAT+TGG | + | chr2.1:64934317-64934336 | MS.gene27186:CDS | 35.0% | |
AGTTGCCACCAAATGTTATA+AGG | + | chr2.1:64934994-64935013 | MS.gene27186:CDS | 35.0% | |
AGTTTCTGCTCAAAAGTCAA+AGG | - | chr2.1:64935757-64935776 | None:intergenic | 35.0% | |
ATTGCAATTCTTACGGCAAA+AGG | - | chr2.1:64933353-64933372 | None:intergenic | 35.0% | |
CGTCAATACCAGTAATAGTT+TGG | - | chr2.1:64933881-64933900 | None:intergenic | 35.0% | |
GAGATTGAAGCCAAAATACA+AGG | + | chr2.1:64933620-64933639 | MS.gene27186:CDS | 35.0% | |
GTATCACAAGTTATTGGTAG+AGG | - | chr2.1:64934168-64934187 | None:intergenic | 35.0% | |
GTGTTCAAAAGGAATGATCA+AGG | + | chr2.1:64933387-64933406 | MS.gene27186:CDS | 35.0% | |
TGAAACTTCATTTCAAAGCG+TGG | - | chr2.1:64934105-64934124 | None:intergenic | 35.0% | |
TGTTGCAAAGAAATACGCAA+CGG | + | chr2.1:64934069-64934088 | MS.gene27186:CDS | 35.0% | |
TTATCATGACATGGAGTTTG+TGG | - | chr2.1:64933758-64933777 | None:intergenic | 35.0% | |
TTGCAATTCTTACGGCAAAA+GGG | - | chr2.1:64933352-64933371 | None:intergenic | 35.0% | |
TTTGTGATAGATGGCACAAA+AGG | - | chr2.1:64935356-64935375 | None:intergenic | 35.0% | |
! | AAATTGGTAACAAAAGCTCG+CGG | + | chr2.1:64934333-64934352 | MS.gene27186:CDS | 35.0% |
! | AAGTCAGGCCTTATAACATT+TGG | - | chr2.1:64935005-64935024 | None:intergenic | 35.0% |
! | ATGATAAGGAGCGTATGTAT+TGG | + | chr2.1:64933771-64933790 | MS.gene27186:CDS | 35.0% |
! | CACCAACTTCTTTGTTTCTT+AGG | + | chr2.1:64935565-64935584 | MS.gene27186:intron | 35.0% |
! | GTGTCAATTTTTACCTGCAA+AGG | - | chr2.1:64934780-64934799 | None:intergenic | 35.0% |
! | TTGACTTTTGAGCAGAAACT+TGG | + | chr2.1:64935757-64935776 | MS.gene27186:CDS | 35.0% |
!! | TAAGTTTTTGGACCTAAGTC+AGG | - | chr2.1:64935020-64935039 | None:intergenic | 35.0% |
AACGGATAAACTCGTCACAA+TGG | - | chr2.1:64934917-64934936 | None:intergenic | 40.0% | |
AAGAAGCTAGAGGAAGAGTT+TGG | + | chr2.1:64935638-64935657 | MS.gene27186:CDS | 40.0% | |
AATGCTCTCCAAGTAACCAT+TGG | - | chr2.1:64934567-64934586 | None:intergenic | 40.0% | |
ACACCTTCAGATTTCTCACT+TGG | - | chr2.1:64935816-64935835 | None:intergenic | 40.0% | |
AGAGGTGATGAATACATGCA+TGG | + | chr2.1:64934135-64934154 | MS.gene27186:CDS | 40.0% | |
AGATGCTCAAGCTAAAAGAC+TGG | + | chr2.1:64934856-64934875 | MS.gene27186:CDS | 40.0% | |
AGCACATAAGGCTCAAGATA+GGG | + | chr2.1:64935301-64935320 | MS.gene27186:CDS | 40.0% | |
AGGTACCCCAATATGTCAAT+TGG | + | chr2.1:64933307-64933326 | MS.gene27186:intron | 40.0% | |
ATACGCTCCTTATCATGACA+TGG | - | chr2.1:64933767-64933786 | None:intergenic | 40.0% | |
ATCAGTGCTTGAGAAAGGAT+AGG | + | chr2.1:64933106-64933125 | MS.gene27186:CDS | 40.0% | |
ATGTCATCAGTGCTTGAGAA+AGG | + | chr2.1:64933101-64933120 | MS.gene27186:CDS | 40.0% | |
CAGATGTCAAGTGACCTTAT+AGG | + | chr2.1:64934447-64934466 | MS.gene27186:CDS | 40.0% | |
CTTTGTGTCACCAGAAAATG+TGG | + | chr2.1:64935971-64935990 | MS.gene27186:CDS | 40.0% | |
GAAGCAGTATTTATACCTGC+TGG | + | chr2.1:64935781-64935800 | MS.gene27186:CDS | 40.0% | |
GAATGTGCTCCAAAAGAACT+AGG | + | chr2.1:64934252-64934271 | MS.gene27186:CDS | 40.0% | |
GGATCGCAATACTCTTGAAA+TGG | - | chr2.1:64934945-64934964 | None:intergenic | 40.0% | |
GGTATCTCAATCTCTGAACA+TGG | - | chr2.1:64933737-64933756 | None:intergenic | 40.0% | |
GTAAGAACGAACATCACCAA+AGG | - | chr2.1:64934691-64934710 | None:intergenic | 40.0% | |
TAACAACTTGGTCAACAGCA+TGG | - | chr2.1:64936199-64936218 | None:intergenic | 40.0% | |
TAAGGTCACTTGACATCTGA+CGG | - | chr2.1:64934446-64934465 | None:intergenic | 40.0% | |
TCACCAAGTGAGAAATCTGA+AGG | + | chr2.1:64935810-64935829 | MS.gene27186:CDS | 40.0% | |
TCGACTTCCTAAGAATCACA+GGG | + | chr2.1:64936025-64936044 | MS.gene27186:CDS | 40.0% | |
TGAGCATAAGAAGAAGCTAG+AGG | + | chr2.1:64935628-64935647 | MS.gene27186:CDS | 40.0% | |
TGCAATTCTTACGGCAAAAG+GGG | - | chr2.1:64933351-64933370 | None:intergenic | 40.0% | |
TTGGTGCGACAAGTATAAGA+TGG | + | chr2.1:64935168-64935187 | MS.gene27186:intron | 40.0% | |
! | TCAGATTTCTCACTTGGTGA+GGG | - | chr2.1:64935810-64935829 | None:intergenic | 40.0% |
! | TCAGGCCTTATAACATTTGG+TGG | - | chr2.1:64935002-64935021 | None:intergenic | 40.0% |
! | TGTACAGGCTATTGATTGCT+TGG | + | chr2.1:64934632-64934651 | MS.gene27186:CDS | 40.0% |
! | TTCAGATTTCTCACTTGGTG+AGG | - | chr2.1:64935811-64935830 | None:intergenic | 40.0% |
!! | GAGGGTCTTGTTCAAGATAA+TGG | + | chr2.1:64935326-64935345 | MS.gene27186:CDS | 40.0% |
!! | GGTCTTGTTCAAGATAATGG+AGG | + | chr2.1:64935329-64935348 | MS.gene27186:CDS | 40.0% |
!! | TTCCAAGAGTATTGGAGGAA+CGG | + | chr2.1:64934486-64934505 | MS.gene27186:CDS | 40.0% |
!!! | TCTTTTAGCTTGAGCATCTC+TGG | - | chr2.1:64934855-64934874 | None:intergenic | 40.0% |
AAAGAACTAGGTGGTTGTGG+TGG | + | chr2.1:64934264-64934283 | MS.gene27186:CDS | 45.0% | |
AACAAGGGACAGGATTGAGT+TGG | + | chr2.1:64934538-64934557 | MS.gene27186:CDS | 45.0% | |
AAGGCTCAAGATAGGGAAGA+GGG | + | chr2.1:64935308-64935327 | MS.gene27186:CDS | 45.0% | |
ACAAGGGACAGGATTGAGTT+GGG | + | chr2.1:64934539-64934558 | MS.gene27186:CDS | 45.0% | |
AGAAACAGCTGGTGCACTTT+GGG | + | chr2.1:64935385-64935404 | MS.gene27186:CDS | 45.0% | |
ATAAACTCGTCACAATGGCG+CGG | - | chr2.1:64934912-64934931 | None:intergenic | 45.0% | |
CAATTGGAGATATCGCAGAG+AGG | + | chr2.1:64933323-64933342 | MS.gene27186:CDS | 45.0% | |
CCAAAAGAACTAGGTGGTTG+TGG | + | chr2.1:64934261-64934280 | MS.gene27186:CDS | 45.0% | |
CCATTGTGATATTGCAGACG+CGG | + | chr2.1:64935094-64935113 | MS.gene27186:CDS | 45.0% | |
GAGCACATAAGGCTCAAGAT+AGG | + | chr2.1:64935300-64935319 | MS.gene27186:CDS | 45.0% | |
GGCAAGAGAAGACAAACTTG+AGG | + | chr2.1:64936046-64936065 | MS.gene27186:CDS | 45.0% | |
GGTGATGAATACATGCATGG+TGG | + | chr2.1:64934138-64934157 | MS.gene27186:CDS | 45.0% | |
TAAGGCTCAAGATAGGGAAG+AGG | + | chr2.1:64935307-64935326 | MS.gene27186:CDS | 45.0% | |
TATGGAACCAGAGAAGAGCT+TGG | + | chr2.1:64935047-64935066 | MS.gene27186:CDS | 45.0% | |
TCTCTTGCCCTGTGATTCTT+AGG | - | chr2.1:64936035-64936054 | None:intergenic | 45.0% | |
TGAAGCGCATTCTTCCAGAT+GGG | + | chr2.1:64934301-64934320 | MS.gene27186:CDS | 45.0% | |
TGTGCTCCAAAAGAACTAGG+TGG | + | chr2.1:64934255-64934274 | MS.gene27186:CDS | 45.0% | |
! | GTCGACTTCCTAAGAATCAC+AGG | + | chr2.1:64936024-64936043 | MS.gene27186:CDS | 45.0% |
! | TGATTGCTTGGCTAGTTGTG+AGG | + | chr2.1:64934644-64934663 | MS.gene27186:CDS | 45.0% |
!! | CCACAACCACCTAGTTCTTT+TGG | - | chr2.1:64934264-64934283 | None:intergenic | 45.0% |
AGGTTGAGAATTCCAGCTCG+AGG | - | chr2.1:64934966-64934985 | None:intergenic | 50.0% | |
CACCGTTCCTCCAATACTCT+TGG | - | chr2.1:64934491-64934510 | None:intergenic | 50.0% | |
CAGAAACAGCTGGTGCACTT+TGG | + | chr2.1:64935384-64935403 | MS.gene27186:CDS | 50.0% | |
CCGCGTCTGCAATATCACAA+TGG | - | chr2.1:64935097-64935116 | None:intergenic | 50.0% | |
CTGAAGCGCATTCTTCCAGA+TGG | + | chr2.1:64934300-64934319 | MS.gene27186:CDS | 50.0% | |
GACACTCGCCAGTTCTTTGA+AGG | + | chr2.1:64934795-64934814 | MS.gene27186:CDS | 50.0% | |
GACGTTCTCAAACAAGGGAC+AGG | + | chr2.1:64934528-64934547 | MS.gene27186:CDS | 50.0% | |
GTTGGGAGCCAATGGTTACT+TGG | + | chr2.1:64934556-64934575 | MS.gene27186:CDS | 50.0% | |
! | TTGGTGGCAACTTTGCAGCA+AGG | - | chr2.1:64934986-64935005 | None:intergenic | 50.0% |
!! | AGGATTGAGTTGGGAGCCAA+TGG | + | chr2.1:64934548-64934567 | MS.gene27186:CDS | 50.0% |
ACCAGAGAAGAGCTTGGCAG+AGG | + | chr2.1:64935053-64935072 | MS.gene27186:CDS | 55.0% | |
AGCGCATTCTTCCAGATGGG+AGG | + | chr2.1:64934304-64934323 | MS.gene27186:CDS | 55.0% | |
TCCTCTGCCAAGCTCTTCTC+TGG | - | chr2.1:64935057-64935076 | None:intergenic | 55.0% | |
TGGTTGTGGTGGCTGTGTGA+TGG | + | chr2.1:64934275-64934294 | MS.gene27186:CDS | 55.0% | |
! | GAGTATTGCGATCCTCGAGC+TGG | + | chr2.1:64934951-64934970 | MS.gene27186:CDS | 55.0% |
!! | ACTTGGTGAGGGCATCCAGC+AGG | - | chr2.1:64935799-64935818 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 64932962 | 64936259 | 64932962 | ID=MS.gene27186 |
chr2.1 | mRNA | 64932962 | 64936259 | 64932962 | ID=MS.gene27186.t1;Parent=MS.gene27186 |
chr2.1 | exon | 64932962 | 64932979 | 64932962 | ID=MS.gene27186.t1.exon1;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64932962 | 64932979 | 64932962 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64933078 | 64933190 | 64933078 | ID=MS.gene27186.t1.exon2;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64933078 | 64933190 | 64933078 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64933309 | 64933408 | 64933309 | ID=MS.gene27186.t1.exon3;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64933309 | 64933408 | 64933309 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64933509 | 64933641 | 64933509 | ID=MS.gene27186.t1.exon4;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64933509 | 64933641 | 64933509 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64933729 | 64933792 | 64933729 | ID=MS.gene27186.t1.exon5;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64933729 | 64933792 | 64933729 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64933996 | 64934665 | 64933996 | ID=MS.gene27186.t1.exon6;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64933996 | 64934665 | 64933996 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64934786 | 64935115 | 64934786 | ID=MS.gene27186.t1.exon7;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64934786 | 64935115 | 64934786 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64935227 | 64935502 | 64935227 | ID=MS.gene27186.t1.exon8;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64935227 | 64935502 | 64935227 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64935587 | 64935659 | 64935587 | ID=MS.gene27186.t1.exon9;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64935587 | 64935659 | 64935587 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64935746 | 64935831 | 64935746 | ID=MS.gene27186.t1.exon10;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64935746 | 64935831 | 64935746 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64935948 | 64936067 | 64935948 | ID=MS.gene27186.t1.exon11;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64935948 | 64936067 | 64935948 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
chr2.1 | exon | 64936179 | 64936259 | 64936179 | ID=MS.gene27186.t1.exon12;Parent=MS.gene27186.t1 |
chr2.1 | CDS | 64936179 | 64936259 | 64936179 | ID=cds.MS.gene27186.t1;Parent=MS.gene27186.t1 |
Gene Sequence |
Protein sequence |