AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27323

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27323.t1 MTR_1g022160 98.956 479 5 0 1 479 1 479 0.0 974
MS.gene27323.t1 MTR_1g022160 98.517 472 7 0 1 472 1 472 0.0 952
MS.gene27323.t1 MTR_1g022160 98.929 467 5 0 1 467 1 467 0.0 949
MS.gene27323.t1 MTR_1g022160 93.229 384 20 2 1 384 1 378 0.0 681
MS.gene27323.t1 MTR_3g116510 63.789 475 144 5 8 478 8 458 0.0 613
MS.gene27323.t1 MTR_4g069940 63.539 469 149 5 10 477 15 462 0.0 607
MS.gene27323.t1 MTR_3g116510 61.782 348 109 4 131 478 1 324 6.66e-155 443
MS.gene27323.t1 MTR_7g026340 40.798 451 238 7 24 472 23 446 4.57e-125 372
MS.gene27323.t1 MTR_4g083500 42.484 459 239 10 24 474 44 485 3.69e-119 359
MS.gene27323.t1 MTR_6g088885 37.370 479 268 7 4 478 10 460 2.12e-111 339
MS.gene27323.t1 MTR_1g056640 37.849 465 269 8 24 477 38 493 6.71e-107 327
MS.gene27323.t1 MTR_1g007810 48.125 320 158 4 24 341 16 329 6.27e-102 310
MS.gene27323.t1 MTR_5g085580 36.522 460 271 7 24 477 25 469 1.14e-101 312
MS.gene27323.t1 MTR_1g077990 46.894 322 168 3 24 345 31 349 1.76e-100 307
MS.gene27323.t1 MTR_4g084480 44.160 351 193 3 24 373 32 380 1.89e-97 299
MS.gene27323.t1 MTR_3g065460 35.833 480 268 6 4 476 1 447 1.97e-97 302
MS.gene27323.t1 MTR_4g084480 45.963 322 172 2 24 345 32 351 1.84e-96 296
MS.gene27323.t1 MTR_4g084480 45.963 322 172 2 24 345 25 344 1.91e-96 296
MS.gene27323.t1 MTR_4g052970 43.195 338 190 2 24 361 29 364 1.64e-95 294
MS.gene27323.t1 MTR_2g086530 43.064 346 182 5 9 347 11 348 1.78e-95 294
MS.gene27323.t1 MTR_2g086530 43.827 324 178 3 24 347 8 327 1.53e-94 291
MS.gene27323.t1 MTR_5g078200 36.534 479 265 6 4 476 1 446 5.54e-94 298
MS.gene27323.t1 MTR_8g012400 36.383 481 268 12 4 474 6 458 6.06e-94 292
MS.gene27323.t1 MTR_4g088155 33.755 474 284 9 8 474 7 457 6.38e-93 290
MS.gene27323.t1 MTR_4g010200 42.249 329 189 1 25 353 34 361 3.41e-92 285
MS.gene27323.t1 MTR_3g083580 34.656 479 277 7 1 476 3 448 5.12e-92 288
MS.gene27323.t1 MTR_8g102340 35.088 456 234 7 20 474 24 418 9.03e-92 287
MS.gene27323.t1 MTR_7g053500 35.449 457 263 9 25 474 27 458 7.71e-91 284
MS.gene27323.t1 MTR_2g019345 43.491 338 185 5 9 344 8 341 3.37e-89 278
MS.gene27323.t1 MTR_1g031900 34.238 479 277 5 4 476 1 447 1.46e-88 280
MS.gene27323.t1 MTR_1g031900 34.238 479 277 5 4 476 1 447 1.99e-88 280
MS.gene27323.t1 MTR_4g132280 34.716 458 264 5 22 476 43 468 3.25e-87 277
MS.gene27323.t1 MTR_5g078200 36.323 446 247 5 35 476 1 413 1.69e-86 277
MS.gene27323.t1 MTR_8g085720 33.542 480 283 5 1 476 3 450 8.78e-86 272
MS.gene27323.t1 MTR_3g080410 41.888 339 188 5 24 356 26 361 1.06e-83 263
MS.gene27323.t1 MTR_4g114850 39.062 320 194 1 25 344 27 345 3.81e-81 256
MS.gene27323.t1 MTR_4g114850 39.062 320 194 1 25 344 27 345 4.14e-81 256
MS.gene27323.t1 MTR_4g114850 39.062 320 194 1 25 344 27 345 7.33e-81 256
MS.gene27323.t1 MTR_8g012400 36.658 401 223 9 79 474 4 378 8.95e-78 248
MS.gene27323.t1 MTR_7g053500 35.732 403 227 9 79 474 4 381 3.64e-77 246
MS.gene27323.t1 MTR_4g076500 41.613 310 171 5 24 333 78 377 8.52e-72 233
MS.gene27323.t1 MTR_7g081350 38.529 340 196 8 3 340 5 333 1.61e-66 217
MS.gene27323.t1 MTR_4g076470 37.092 337 194 9 4 340 6 324 1.19e-63 209
MS.gene27323.t1 MTR_1g052430 38.245 319 187 6 24 341 32 341 2.07e-63 211
MS.gene27323.t1 MTR_4g076490 37.267 322 188 7 24 345 97 404 1.03e-62 210
MS.gene27323.t1 MTR_4g076440 35.799 338 199 8 4 341 6 325 2.22e-61 204
MS.gene27323.t1 MTR_2g034480 35.465 344 211 8 8 349 10 344 1.88e-60 202
MS.gene27323.t1 MTR_4g076570 37.500 320 192 5 24 343 22 333 3.35e-60 201
MS.gene27323.t1 MTR_4g076430 36.795 337 195 10 4 340 6 324 3.53e-60 200
MS.gene27323.t1 MTR_4g076255 36.170 329 192 8 13 341 17 327 3.11e-58 195
MS.gene27323.t1 MTR_7g081370 35.000 340 196 8 3 340 5 321 1.70e-55 188
MS.gene27323.t1 MTR_4g124440 29.350 477 288 16 3 468 5 443 4.25e-55 191
MS.gene27323.t1 MTR_3g095050 29.677 465 282 19 18 474 28 455 1.12e-54 190
MS.gene27323.t1 MTR_2g034470 34.111 343 213 9 24 363 30 362 1.16e-54 187
MS.gene27323.t1 MTR_4g112025 29.916 478 284 17 9 472 14 454 1.34e-54 191
MS.gene27323.t1 MTR_2g034440 34.936 312 191 8 24 333 22 323 2.65e-54 185
MS.gene27323.t1 MTR_1g053320 29.498 478 292 15 5 472 12 454 1.40e-53 187
MS.gene27323.t1 MTR_2g034470 33.631 336 210 9 31 363 2 327 6.99e-52 179
MS.gene27323.t1 MTR_1g010120 29.565 460 278 15 24 474 26 448 8.14e-51 180
MS.gene27323.t1 MTR_2g027560 29.274 468 283 16 20 477 24 453 1.62e-50 179
MS.gene27323.t1 MTR_7g085390 29.935 461 273 17 24 472 26 448 2.44e-50 179
MS.gene27323.t1 MTR_8g092070 27.719 469 291 15 22 477 32 465 1.06e-49 179
MS.gene27323.t1 MTR_3g108600 28.211 475 278 15 8 474 16 435 1.26e-45 166
MS.gene27323.t1 MTR_5g081720 35.786 299 183 6 45 341 58 349 2.92e-45 162
MS.gene27323.t1 MTR_6g032820 28.731 449 267 17 24 457 26 436 7.82e-45 162
MS.gene27323.t1 MTR_3g031770 28.233 464 291 14 16 474 19 445 4.08e-42 156
MS.gene27323.t1 MTR_4g134280 27.513 378 225 14 110 477 1 339 2.24e-32 127
MS.gene27323.t1 MTR_8g089400 45.918 98 52 1 379 475 25 122 5.75e-25 101
MS.gene27323.t1 MTR_8g089400 45.918 98 52 1 379 475 45 142 1.60e-24 100
MS.gene27323.t1 MTR_8g085440 51.190 84 41 0 391 474 32 115 1.28e-23 95.9
MS.gene27323.t1 MTR_8g085390 48.235 85 44 0 390 474 29 113 1.57e-22 95.1
MS.gene27323.t1 MTR_3g048280 40.152 132 69 5 352 477 71 198 8.17e-22 93.6
MS.gene27323.t1 MTR_8g085420 50.633 79 39 0 391 469 32 110 2.53e-21 90.1
MS.gene27323.t1 MTR_5g091650 42.373 118 49 4 373 474 77 191 5.92e-20 88.2
MS.gene27323.t1 MTR_4g109490 45.745 94 50 1 381 474 14 106 1.56e-19 87.4
MS.gene27323.t1 MTR_5g091650 42.373 118 49 4 373 474 77 191 1.74e-19 88.6
MS.gene27323.t1 MTR_7g111600 49.425 87 38 3 391 474 160 243 2.41e-19 87.8
MS.gene27323.t1 MTR_7g111600 41.259 143 58 7 354 474 105 243 3.94e-19 88.2
MS.gene27323.t1 MTR_1g084820 51.899 79 37 1 390 468 419 496 5.99e-19 90.1
MS.gene27323.t1 MTR_1g084820 51.899 79 37 1 390 468 419 496 7.38e-19 90.1
MS.gene27323.t1 MTR_7g111600 41.259 143 58 7 354 474 105 243 1.13e-18 87.0
MS.gene27323.t1 MTR_2g049670 45.882 85 45 1 391 475 158 241 1.99e-18 86.7
MS.gene27323.t1 MTR_8g085400 47.500 80 39 1 391 470 33 109 7.43e-18 79.7
MS.gene27323.t1 MTR_5g044530 44.681 94 50 1 383 474 14 107 7.53e-18 83.6
MS.gene27323.t1 MTR_1g116870 42.857 84 48 0 391 474 276 359 8.85e-18 85.1
MS.gene27323.t1 MTR_4g036775 34.426 122 73 3 242 361 80 196 1.49e-17 82.0
MS.gene27323.t1 MTR_3g082080 46.154 78 42 0 391 468 157 234 2.07e-17 82.0
MS.gene27323.t1 MTR_4g036680 34.426 122 73 3 242 361 80 196 2.48e-17 81.3
MS.gene27323.t1 MTR_2g072500 41.573 89 51 1 386 474 3 90 3.40e-17 77.0
MS.gene27323.t1 MTR_4g079530 44.318 88 48 1 391 477 37 124 4.49e-16 75.1
MS.gene27323.t1 MTR_5g097420 43.529 85 47 1 391 474 30 114 5.36e-16 74.7
MS.gene27323.t1 MTR_8g088120 50.633 79 33 3 399 474 56 131 1.12e-15 76.6
MS.gene27323.t1 MTR_4g079530 44.318 88 48 1 391 477 37 124 1.25e-15 75.1
MS.gene27323.t1 MTR_4g083070 42.222 90 51 1 386 474 16 105 4.27e-15 74.3
MS.gene27323.t1 MTR_5g015720 44.186 86 46 2 391 474 329 414 7.30e-15 76.6
MS.gene27323.t1 MTR_4g133735 37.647 85 52 1 389 472 26 110 2.14e-14 70.1
MS.gene27323.t1 MTR_4g133730 33.333 87 57 1 389 474 26 112 9.53e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27323.t1 AT4G34480 63.889 468 139 4 8 474 9 447 0.0 598
MS.gene27323.t1 AT2G16230 63.053 452 141 3 23 474 24 449 0.0 585
MS.gene27323.t1 AT5G42720 61.500 400 138 6 1 388 1 396 1.30e-173 495
MS.gene27323.t1 AT4G34480 69.565 345 103 2 8 351 9 352 3.51e-171 486
MS.gene27323.t1 AT4G34480 61.918 365 110 3 110 474 1 336 1.55e-156 450
MS.gene27323.t1 AT5G24318 45.197 458 220 8 20 474 26 455 1.98e-137 404
MS.gene27323.t1 AT5G24318 45.154 454 218 8 20 470 26 451 2.44e-135 398
MS.gene27323.t1 AT2G05790 37.797 463 263 9 24 477 25 471 3.08e-106 324
MS.gene27323.t1 AT5G55180 37.118 458 263 5 23 478 26 460 3.52e-106 324
MS.gene27323.t1 AT3G55430 37.281 456 246 13 24 474 29 449 6.94e-106 323
MS.gene27323.t1 AT5G24318 47.416 329 165 4 20 346 26 348 5.20e-105 318
MS.gene27323.t1 AT4G26830 35.729 473 276 6 8 478 9 455 1.69e-104 319
MS.gene27323.t1 AT4G29360 38.116 467 282 5 9 474 15 475 2.43e-104 322
MS.gene27323.t1 AT4G26830 36.245 458 264 6 23 478 28 459 5.20e-104 318
MS.gene27323.t1 AT5G55180 37.500 448 255 5 23 468 26 450 7.48e-104 318
MS.gene27323.t1 AT4G29360 37.895 475 282 6 9 474 15 485 2.53e-103 319
MS.gene27323.t1 AT5G56590 36.166 459 264 5 24 478 26 459 1.49e-101 313
MS.gene27323.t1 AT2G39640 34.937 478 267 7 1 472 1 440 1.06e-100 313
MS.gene27323.t1 AT2G39640 42.169 83 48 0 391 473 460 542 1.74e-18 88.6
MS.gene27323.t1 AT2G01630 37.174 460 252 5 21 476 20 446 8.03e-100 309
MS.gene27323.t1 AT1G30080 47.812 320 165 2 24 343 36 353 1.50e-99 304
MS.gene27323.t1 AT1G32860 48.148 324 164 3 24 345 29 350 2.40e-99 305
MS.gene27323.t1 AT1G30080 47.812 320 165 2 24 343 36 353 4.20e-99 304
MS.gene27323.t1 AT5G24318 44.898 343 160 6 134 474 1 316 1.62e-98 299
MS.gene27323.t1 AT2G01630 37.389 452 246 5 21 468 20 438 4.57e-98 302
MS.gene27323.t1 AT1G11820 35.730 459 260 4 21 476 41 467 8.61e-96 299
MS.gene27323.t1 AT4G18340 44.571 350 190 3 4 351 12 359 2.55e-94 291
MS.gene27323.t1 AT4G18340 44.571 350 190 3 4 351 12 359 3.92e-94 291
MS.gene27323.t1 AT2G27500 42.368 321 184 1 24 344 29 348 1.01e-92 286
MS.gene27323.t1 AT1G66250 35.853 463 259 6 18 476 26 454 1.57e-92 290
MS.gene27323.t1 AT2G27500 42.236 322 185 1 24 345 29 349 2.72e-92 286
MS.gene27323.t1 AT1G11820 35.477 451 256 4 21 468 41 459 3.10e-92 288
MS.gene27323.t1 AT3G07320 35.088 456 264 9 25 474 26 455 1.10e-87 276
MS.gene27323.t1 AT3G13560 35.667 457 258 4 23 476 25 448 1.94e-87 277
MS.gene27323.t1 AT3G13560 35.667 457 258 4 23 476 25 448 1.94e-87 277
MS.gene27323.t1 AT3G13560 35.667 457 258 4 23 476 25 448 1.94e-87 277
MS.gene27323.t1 AT3G13560 35.667 457 258 4 23 476 25 448 1.94e-87 277
MS.gene27323.t1 AT3G13560 35.667 457 258 4 23 476 25 448 1.94e-87 277
MS.gene27323.t1 AT5G42100 43.519 324 178 4 24 344 27 348 2.36e-86 271
MS.gene27323.t1 AT5G42100 43.519 324 178 4 24 344 27 348 3.03e-86 271
MS.gene27323.t1 AT3G23770 33.843 458 273 9 24 474 37 471 8.43e-86 272
MS.gene27323.t1 AT3G15800 42.121 330 189 2 25 353 44 372 2.62e-85 268
MS.gene27323.t1 AT4G14080 33.260 457 274 9 24 474 42 473 2.68e-85 270
MS.gene27323.t1 AT2G26600 38.720 328 200 1 25 352 35 361 2.99e-83 262
MS.gene27323.t1 AT2G01630 37.280 397 213 4 21 414 20 383 9.90e-81 256
MS.gene27323.t1 AT3G46570 41.880 351 190 10 2 346 4 346 4.87e-77 245
MS.gene27323.t1 AT2G27500 43.015 272 154 1 74 345 1 271 7.36e-77 243
MS.gene27323.t1 AT1G11820 38.509 322 195 2 21 340 41 361 2.90e-73 236
MS.gene27323.t1 AT3G61810 39.763 337 185 7 16 345 47 372 2.30e-71 231
MS.gene27323.t1 AT2G26600 39.925 268 160 1 85 352 1 267 2.10e-66 216
MS.gene27323.t1 AT3G57270 39.498 319 183 6 24 341 27 336 4.59e-65 214
MS.gene27323.t1 AT4G16260 39.806 309 176 6 24 332 24 322 1.23e-63 210
MS.gene27323.t1 AT4G16260 39.404 302 173 6 31 332 2 293 5.14e-61 202
MS.gene27323.t1 AT1G77780 38.757 338 188 10 10 341 7 331 1.18e-59 200
MS.gene27323.t1 AT3G57260 36.875 320 186 8 24 342 32 336 1.78e-59 199
MS.gene27323.t1 AT3G57260 36.875 320 186 8 24 342 48 352 2.44e-59 199
MS.gene27323.t1 AT5G20870 29.652 489 289 16 3 474 9 459 6.36e-59 202
MS.gene27323.t1 AT5G20390 36.991 319 189 8 24 340 33 341 2.91e-57 193
MS.gene27323.t1 AT4G31140 29.769 477 286 16 8 474 11 448 2.01e-56 195
MS.gene27323.t1 AT5G20340 36.875 320 190 8 24 341 43 352 2.46e-55 189
MS.gene27323.t1 AT5G20330 36.760 321 187 8 24 340 34 342 9.16e-53 181
MS.gene27323.t1 AT3G24330 30.217 460 274 16 24 472 39 462 1.66e-52 185
MS.gene27323.t1 AT1G33220 35.410 305 187 6 24 327 34 329 4.82e-50 174
MS.gene27323.t1 AT1G77790 35.443 316 193 7 28 341 34 340 1.22e-49 173
MS.gene27323.t1 AT3G57240 35.897 312 179 11 24 332 35 328 3.42e-49 172
MS.gene27323.t1 AT5G64790 27.706 462 285 15 24 474 28 451 4.57e-49 175
MS.gene27323.t1 AT5G58090 27.826 460 287 15 24 474 22 445 2.41e-48 173
MS.gene27323.t1 AT2G19440 30.803 461 268 19 24 472 21 442 1.36e-47 171
MS.gene27323.t1 AT2G19440 30.803 461 268 19 24 472 21 442 1.36e-47 171
MS.gene27323.t1 AT5G20560 35.048 311 192 7 24 333 34 335 3.54e-47 166
MS.gene27323.t1 AT1G64760 29.545 484 288 19 1 472 4 446 5.55e-47 169
MS.gene27323.t1 AT1G64760 29.545 484 288 19 1 472 4 446 5.55e-47 169
MS.gene27323.t1 AT5G18220 27.922 462 282 14 24 472 30 453 3.33e-46 167
MS.gene27323.t1 AT5G58480 28.322 459 283 14 24 475 26 445 9.21e-46 166
MS.gene27323.t1 AT3G55780 34.899 298 182 8 53 345 64 354 9.27e-45 161
MS.gene27323.t1 AT3G04010 27.766 461 283 15 24 472 33 455 2.06e-43 160
MS.gene27323.t1 AT4G17180 27.115 461 287 15 24 477 25 443 2.67e-42 157
MS.gene27323.t1 AT4G09462 50.000 84 42 0 391 474 29 112 3.18e-26 103
MS.gene27323.t1 AT4G09465 48.810 84 43 0 391 474 31 114 8.31e-26 102
MS.gene27323.t1 AT4G09467 48.810 84 43 0 391 474 31 114 9.75e-26 102
MS.gene27323.t1 AT4G09464 48.810 84 43 0 391 474 31 114 9.75e-26 102
MS.gene27323.t1 AT4G09466 48.810 84 43 0 391 474 31 114 2.55e-25 100
MS.gene27323.t1 AT4G05430 46.392 97 51 1 379 474 11 107 4.12e-25 100
MS.gene27323.t1 AT5G63230 47.619 84 44 0 391 474 26 109 1.16e-24 98.6
MS.gene27323.t1 AT4G05430 46.392 97 51 1 379 474 36 132 1.46e-24 100
MS.gene27323.t1 AT1G66855 48.837 86 43 1 391 475 26 111 2.53e-24 97.8
MS.gene27323.t1 AT1G18650 49.438 89 45 0 386 474 16 104 2.61e-24 100
MS.gene27323.t1 AT1G18650 50.575 87 43 0 386 472 16 102 3.68e-24 98.2
MS.gene27323.t1 AT4G09090 42.697 89 51 0 387 475 27 115 6.87e-24 96.7
MS.gene27323.t1 AT1G66870 46.512 86 45 1 391 475 26 111 1.17e-23 95.9
MS.gene27323.t1 AT1G66870 46.512 86 45 1 391 475 53 138 1.42e-23 96.7
MS.gene27323.t1 AT5G63225 47.253 91 48 0 384 474 18 108 1.42e-23 95.5
MS.gene27323.t1 AT5G61130 47.191 89 47 0 386 474 16 104 1.06e-22 96.3
MS.gene27323.t1 AT5G63250 44.828 87 45 1 391 474 42 128 2.26e-22 93.2
MS.gene27323.t1 AT5G63240 41.441 111 60 2 367 474 18 126 2.94e-22 92.8
MS.gene27323.t1 AT4G13600 47.619 84 44 0 391 474 61 144 3.29e-22 95.5
MS.gene27323.t1 AT4G05430 46.154 91 48 1 379 468 36 126 3.56e-22 92.4
MS.gene27323.t1 AT4G16165 45.349 86 46 1 391 475 26 111 1.85e-20 87.0
MS.gene27323.t1 AT1G66852 44.186 86 46 2 391 475 26 110 5.11e-20 85.9
MS.gene27323.t1 AT2G29735 48.837 86 42 1 391 474 31 116 1.77e-19 84.3
MS.gene27323.t1 AT2G43670 40.476 84 49 1 391 474 35 117 3.32e-19 84.0
MS.gene27323.t1 AT5G08000 46.067 89 48 0 386 474 16 104 5.14e-19 85.5
MS.gene27323.t1 AT5G67460 38.889 126 72 3 352 474 254 377 5.72e-19 89.0
MS.gene27323.t1 AT5G08000 48.235 85 44 0 390 474 39 123 1.15e-18 85.1
MS.gene27323.t1 AT5G53600 42.857 84 47 1 391 474 29 111 3.74e-18 80.5
MS.gene27323.t1 AT1G09460 44.330 97 52 2 383 479 129 223 1.75e-17 84.0
MS.gene27323.t1 AT2G30933 44.086 93 46 3 385 474 76 165 7.72e-17 80.1
MS.gene27323.t1 AT5G67460 39.167 120 68 3 352 468 254 371 8.52e-17 82.4
MS.gene27323.t1 AT1G78520 40.476 84 49 1 391 474 32 114 1.50e-16 75.9
MS.gene27323.t1 AT1G79480 40.476 84 50 0 391 474 311 394 2.62e-16 81.3
MS.gene27323.t1 AT1G79480 40.476 84 50 0 391 474 310 393 2.63e-16 81.3
MS.gene27323.t1 AT2G30933 40.909 110 54 5 366 468 54 159 3.93e-16 76.3
MS.gene27323.t1 AT2G30933 40.909 110 54 5 366 468 54 159 3.93e-16 76.3
MS.gene27323.t1 AT1G29380 45.455 88 42 3 391 475 148 232 4.77e-16 78.6
MS.gene27323.t1 AT2G04910 41.176 85 49 1 391 474 15 99 5.34e-16 73.9
MS.gene27323.t1 AT5G53610 42.683 82 46 1 391 472 28 108 6.21e-16 74.3
MS.gene27323.t1 AT1G29380 45.977 87 41 3 391 474 148 231 6.57e-16 79.0
MS.gene27323.t1 AT1G69295 45.122 82 44 1 387 468 17 97 6.83e-16 77.0
MS.gene27323.t1 AT1G13830 41.860 86 48 1 391 474 21 106 1.08e-15 75.9
MS.gene27323.t1 AT1G13830 41.860 86 48 1 391 474 35 120 1.39e-15 75.9
MS.gene27323.t1 AT1G29380 46.429 84 39 3 391 471 148 228 4.22e-15 75.1
MS.gene27323.t1 AT1G29380 46.429 84 39 3 391 471 148 228 4.22e-15 75.1
MS.gene27323.t1 AT2G43660 38.372 86 52 1 390 474 34 119 5.17e-15 72.0
MS.gene27323.t1 AT2G43660 38.372 86 52 1 390 474 33 118 5.35e-15 72.0
MS.gene27323.t1 AT5G35740 41.860 86 48 2 391 474 30 115 8.29e-15 71.2
MS.gene27323.t1 AT2G03505 37.778 90 54 1 387 474 17 106 9.35e-15 70.9
MS.gene27323.t1 AT1G69295 44.304 79 43 1 390 468 16 93 1.13e-14 73.6
MS.gene27323.t1 AT2G03505 37.778 90 54 1 387 474 17 106 1.16e-14 72.4
MS.gene27323.t1 AT2G03505 37.778 90 54 1 387 474 17 106 1.16e-14 72.4
MS.gene27323.t1 AT2G03505 37.778 90 54 1 387 474 17 106 1.16e-14 72.4
MS.gene27323.t1 AT3G58100 41.176 85 49 1 391 474 41 125 3.11e-14 71.2
MS.gene27323.t1 AT2G04910 41.772 79 45 1 391 468 15 93 6.77e-14 68.9
MS.gene27323.t1 AT3G58100 41.176 85 49 1 391 474 117 201 9.37e-14 71.6
MS.gene27323.t1 AT1G26450 44.737 76 41 1 387 462 17 91 2.46e-13 69.3
MS.gene27323.t1 AT3G28250 38.750 80 48 1 389 468 1 79 6.15e-13 65.9

Find 134 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTTGGTGGTAAAATT+AGG 0.082325 1.2:+2494262 MS.gene27323:CDS
TGCTCAACTACAAGCAAATT+TGG 0.196290 1.2:+2495590 MS.gene27323:CDS
TAGATCTGCACTAGATTCTA+TGG 0.240384 1.2:+2494763 MS.gene27323:CDS
TCCTGGAAGGGCTGATAATT+TGG 0.251824 1.2:+2494452 MS.gene27323:CDS
GGGTTTGTTGTCGTTTAATA+AGG 0.272334 1.2:+2494374 MS.gene27323:CDS
AACATGACAAGAATGGTTTC+TGG 0.284683 1.2:+2492314 None:intergenic
TCCGATTACGATTCCGATTC+CGG 0.307053 1.2:-2494037 None:intergenic
TTCTCTTGGTGGTAAAATTA+GGG 0.311256 1.2:+2494263 MS.gene27323:CDS
GTTGGCGAGGGATTTGATTA+TGG 0.311492 1.2:-2494013 None:intergenic
TTGTCGTTTAATAAGGATAC+TGG 0.317569 1.2:+2494381 MS.gene27323:CDS
TATAATAGTTGTATTTATAC+TGG 0.317977 1.2:+2496388 MS.gene27323:CDS
CATGAATATGTTTGATGCTC+AGG 0.324784 1.2:+2494533 MS.gene27323:CDS
GCATCAGTTAATCCTGCTTT+TGG 0.325082 1.2:-2495570 None:intergenic
GACCGGCATTAGGTTGAAAA+AGG 0.325112 1.2:-2494482 None:intergenic
CATGCTATGTTACTATTATA+CGG 0.335966 1.2:-2495540 None:intergenic
GATTAAGCACCTGCGATCTA+AGG 0.346796 1.2:+2494895 MS.gene27323:CDS
GTTGTTGGACTTGGAACTTT+TGG 0.356417 1.2:-2495516 None:intergenic
GTTGGTGGAAATCCAGGTTT+TGG 0.362874 1.2:-2494106 None:intergenic
GCATCAACTCGACCGGCATT+AGG 0.367245 1.2:-2494492 None:intergenic
AATGATACAAATCTTATTAA+CGG 0.369125 1.2:+2494195 MS.gene27323:CDS
GCATGGTTAGCTAATGTGTT+AGG 0.371637 1.2:-2495675 None:intergenic
TTACTATTATACGGCGTTGT+TGG 0.396054 1.2:-2495531 None:intergenic
GCTGGTTCTGAGAAAGCCTT+CGG 0.400618 1.2:+2494995 MS.gene27323:CDS
CCATTCCTCGGAGTAAACTA+TGG 0.408450 1.2:+2493895 MS.gene27323:CDS
GGATAAGGATTAATAGCAAA+AGG 0.408820 1.2:-2494408 None:intergenic
GATAAGGATTAATAGCAAAA+GGG 0.410562 1.2:-2494407 None:intergenic
AACTCGGAGCCACCTTCTGC+TGG 0.410697 1.2:+2494318 MS.gene27323:CDS
ACCGGAATCGGAATCGTAAT+CGG 0.412511 1.2:+2494036 MS.gene27323:CDS
TTATAAGCAAAATAAGGATA+AGG 0.414067 1.2:-2494423 None:intergenic
CTGGTTCTGAGAAAGCCTTC+GGG 0.427029 1.2:+2494996 MS.gene27323:CDS
TCCCTCGCCAACACCGGAAT+CGG 0.431599 1.2:+2494024 MS.gene27323:CDS
ATGTTGCTGGCGGGATAGTA+AGG 0.437537 1.2:-2494135 None:intergenic
TTTGCTTATAAAAGTGATCC+TGG 0.441378 1.2:+2494435 MS.gene27323:CDS
TACGATTCCGATTCCGGTGT+TGG 0.445725 1.2:-2494031 None:intergenic
ATCCAAGTTTCGCCAAAACC+TGG 0.446819 1.2:+2494094 MS.gene27323:CDS
GAGGACGTTGGTGGAAATCC+AGG 0.449002 1.2:-2494112 None:intergenic
TTATACGGCGTTGTTGGACT+TGG 0.451067 1.2:-2495525 None:intergenic
GGATTTGATTATGGCGGGAT+CGG 0.452407 1.2:-2494004 None:intergenic
GCAAATTTGGATTATGCTTG+TGG 0.452527 1.2:+2495603 MS.gene27323:CDS
GCCAAATTATCAGCCCTTCC+AGG 0.454800 1.2:-2494453 None:intergenic
GGAGGGTATGTCGCCGTTTG+CGG 0.457744 1.2:-2494061 None:intergenic
TTGGATTATGCTTGTGGGCA+GGG 0.458713 1.2:+2495609 MS.gene27323:CDS
ATCTCTTCTATCACACTGTT+GGG 0.461725 1.2:+2495712 MS.gene27323:CDS
GGATGTTGAGATTGTGGTTG+CGG 0.465710 1.2:+2494793 MS.gene27323:CDS
GCTTTCTCAGAACCAGCTCC+AGG 0.467861 1.2:-2494989 None:intergenic
CAAGGTAAACATGACAAGAA+TGG 0.469473 1.2:+2492307 None:intergenic
TCGTCGTTATCTCCTTTGTA+AGG 0.471777 1.2:-2494827 None:intergenic
TATGATGAGGACTTGAAGCC+TGG 0.475102 1.2:+2494971 MS.gene27323:CDS
CTTGATGAAGCTTCTCTTGG+TGG 0.477574 1.2:+2494252 MS.gene27323:CDS
GCGCTTGATGAAGCTTCTCT+TGG 0.478524 1.2:+2494249 MS.gene27323:CDS
CCATAGTTTACTCCGAGGAA+TGG 0.481901 1.2:-2493895 None:intergenic
GGTGATGAGGATGATGTTGC+TGG 0.482378 1.2:-2494148 None:intergenic
GAGATTGTGGTTGCGGAGAC+AGG 0.486438 1.2:+2494800 MS.gene27323:CDS
TAGTAGCCCCGTGGTATCTC+CGG 0.488228 1.2:+2495093 MS.gene27323:CDS
TTTCGAAGGCGGTGGTTTGG+AGG 0.488710 1.2:-2493963 None:intergenic
CGGTGGCGGATGCTGGTGGA+AGG 0.489604 1.2:-2493933 None:intergenic
CAAATTTGGATTATGCTTGT+GGG 0.491169 1.2:+2495604 MS.gene27323:CDS
ATCGTAATCGGAGCCGCAAA+CGG 0.493965 1.2:+2494048 MS.gene27323:CDS
TTTGGATTATGCTTGTGGGC+AGG 0.494350 1.2:+2495608 MS.gene27323:CDS
GTGGAAGGTTGTCGGCGACT+TGG 0.495042 1.2:-2493918 None:intergenic
TCCGATTCCGGTGTTGGCGA+GGG 0.497776 1.2:-2494025 None:intergenic
CATAGTTTACTCCGAGGAAT+GGG 0.498903 1.2:-2493894 None:intergenic
TGGTAAAATTAGGGTTTCTA+CGG 0.503871 1.2:+2494272 MS.gene27323:CDS
GCGAGGGATTTGATTATGGC+GGG 0.506513 1.2:-2494009 None:intergenic
AATCTCTTCTATCACACTGT+TGG 0.507292 1.2:+2495711 MS.gene27323:CDS
GGATGCTGGTGGAAGGTTGT+CGG 0.507464 1.2:-2493926 None:intergenic
AGCACCTGCGATCTAAGGTT+GGG 0.513066 1.2:+2494900 MS.gene27323:CDS
GCATGGTGTGTGCCAAAAGC+AGG 0.513211 1.2:+2495558 MS.gene27323:CDS
AGATCTGCACTAGATTCTAT+GGG 0.515532 1.2:+2494764 MS.gene27323:CDS
GAGGACTTGAAGCCTGGAGC+TGG 0.515732 1.2:+2494977 MS.gene27323:CDS
ACTGATTTCCCTGGCATCAG+TGG 0.516517 1.2:-2494926 None:intergenic
GCCTTTGCATTCTCAATACT+CGG 0.519040 1.2:-2494857 None:intergenic
GTTGGGACACCACTGATGCC+AGG 0.519883 1.2:+2494917 MS.gene27323:CDS
TTCCGATTCCGGTGTTGGCG+AGG 0.525201 1.2:-2494026 None:intergenic
AAAGGAGATAACGACGAGGC+TGG 0.525920 1.2:+2494833 MS.gene27323:CDS
GGTTCAAAACAAGCACCTCC+TGG 0.528280 1.2:-2495654 None:intergenic
ATCAAATCCCTCGCCAACAC+CGG 0.533535 1.2:+2494018 MS.gene27323:CDS
CTTATAAAAGTGATCCTGGA+AGG 0.535941 1.2:+2494439 MS.gene27323:CDS
GGCGAGGGATTTGATTATGG+CGG 0.537617 1.2:-2494010 None:intergenic
CTTCAAGTCCTCATCATACA+AGG 0.538927 1.2:-2494966 None:intergenic
CGACAACAAACCCTGCAAAA+CGG 0.539250 1.2:-2494364 None:intergenic
AGTATTTGCATCAACTCGAC+CGG 0.541663 1.2:-2494499 None:intergenic
ATAGTAAGGGAGGACGTTGG+TGG 0.542466 1.2:-2494121 None:intergenic
AAGCACCTGCGATCTAAGGT+TGG 0.545052 1.2:+2494899 MS.gene27323:CDS
TGTGAGGAAACTTACTTGCA+AGG 0.552392 1.2:-2492364 None:intergenic
ATAGTTGTATTTATACTGGA+GGG 0.553455 1.2:+2496392 MS.gene27323:CDS
TAGTGCTTTGTTGCTTAGAG+AGG 0.556972 1.2:-2495057 None:intergenic
AATAGTTGTATTTATACTGG+AGG 0.558577 1.2:+2496391 MS.gene27323:CDS
GATACCACGGGGCTACTAGT+AGG 0.558920 1.2:-2495088 None:intergenic
AGTGTGATAGAAGAGATTCA+TGG 0.564034 1.2:-2495706 None:intergenic
ATCAGTGTTGTAAAGCCCGA+AGG 0.564335 1.2:-2495011 None:intergenic
GTGTCCCAACCTTAGATCGC+AGG 0.566462 1.2:-2494904 None:intergenic
CAAAACAAGCACCTCCTGGT+TGG 0.568304 1.2:-2495650 None:intergenic
ATAAGGATTAATAGCAAAAG+GGG 0.575778 1.2:-2494406 None:intergenic
TATGTGTCCACTGATTTCCC+TGG 0.578850 1.2:-2494935 None:intergenic
TTTGCGGTGGCGGATGCTGG+TGG 0.579027 1.2:-2493937 None:intergenic
GCAGAATCTGACCCATTCCT+CGG 0.583867 1.2:+2493883 MS.gene27323:intron
CAAACGATGATCTATGACGC+TGG 0.587813 1.2:+2495034 MS.gene27323:CDS
ACTTGGATCGGAAGCGAGGG+AGG 0.590059 1.2:-2494079 None:intergenic
ATGAGGATGATGTTGCTGGC+GGG 0.593640 1.2:-2494144 None:intergenic
TCATGAAAACTTCCAGCAGA+AGG 0.595377 1.2:-2494330 None:intergenic
CGAAACTTGGATCGGAAGCG+AGG 0.597502 1.2:-2494083 None:intergenic
TTCTACGGTTCATACGATGT+CGG 0.598813 1.2:+2494287 MS.gene27323:CDS
TTGGGACACCACTGATGCCA+GGG 0.599886 1.2:+2494918 MS.gene27323:CDS
CGTATAATAGTAACATAGCA+TGG 0.600001 1.2:+2495541 MS.gene27323:CDS
CATCTTTGCCTTGTATGATG+AGG 0.600659 1.2:+2494958 MS.gene27323:CDS
GAAACTTGGATCGGAAGCGA+GGG 0.603669 1.2:-2494082 None:intergenic
CGGGATCGGTTCCGTATAGT+CGG 0.611085 1.2:-2493990 None:intergenic
CTTCGTTGCCCACGGTGATG+AGG 0.612057 1.2:-2494161 None:intergenic
AATTCATACCGGAGATACCA+CGG 0.615954 1.2:-2495101 None:intergenic
GATTGTAGCTTAATCCAACC+AGG 0.618358 1.2:+2495636 MS.gene27323:CDS
AACATCATCCTCATCACCGT+GGG 0.621796 1.2:+2494153 MS.gene27323:CDS
ATTCATACCGGAGATACCAC+GGG 0.621948 1.2:-2495100 None:intergenic
TTGTGGTTGCGGAGACAGGT+TGG 0.627147 1.2:+2494804 MS.gene27323:CDS
AGTGATGACTTCGTTGCCCA+CGG 0.629845 1.2:-2494169 None:intergenic
TTATAAAAGTGATCCTGGAA+GGG 0.632786 1.2:+2494440 MS.gene27323:CDS
CTTGGATCGGAAGCGAGGGA+GGG 0.633878 1.2:-2494078 None:intergenic
GAGAATGCAAAGGCTTACAA+TGG 0.637829 1.2:+2494866 MS.gene27323:CDS
TGTTGCTGGCGGGATAGTAA+GGG 0.641175 1.2:-2494134 None:intergenic
TGAAAACTTCCAGCAGAAGG+TGG 0.643067 1.2:-2494327 None:intergenic
GATTCATGGCGTATGCAGCA+TGG 0.644106 1.2:-2495692 None:intergenic
GAGACAGGTTGGCCTTACAA+AGG 0.646337 1.2:+2494815 MS.gene27323:CDS
ACCGAGTATTGAGAATGCAA+AGG 0.650369 1.2:+2494856 MS.gene27323:CDS
TGCTGGCGGGATAGTAAGGG+AGG 0.653268 1.2:-2494131 None:intergenic
GATGAGGATGATGTTGCTGG+CGG 0.665630 1.2:-2494145 None:intergenic
ACGGGGCTACTAGTAGGTGT+AGG 0.667625 1.2:-2495082 None:intergenic
GGGATAGTAAGGGAGGACGT+TGG 0.674640 1.2:-2494124 None:intergenic
ACTGATGCCAGGGAAATCAG+TGG 0.687146 1.2:+2494928 MS.gene27323:CDS
CTTGGCCATAGTTTACTCCG+AGG 0.717839 1.2:-2493900 None:intergenic
CAACATCATCCTCATCACCG+TGG 0.722358 1.2:+2494152 MS.gene27323:CDS
TACACCTACTAGTAGCCCCG+TGG 0.742913 1.2:+2495084 MS.gene27323:CDS
TGTAGCTTAATCCAACCAGG+AGG 0.770988 1.2:+2495639 MS.gene27323:CDS
TTCATACCGGAGATACCACG+GGG 0.792540 1.2:-2495099 None:intergenic
TTACAAAGGAGATAACGACG+AGG 0.827370 1.2:+2494829 MS.gene27323:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTATATATATTATCAAAT+AGG - chr1.2:2493179-2493198 None:intergenic 10.0%
!!! CTATTTGATAATATATATAA+TGG + chr1.2:2493177-2493196 MS.gene27323:intron 10.0%
!! AATGATACAAATCTTATTAA+CGG + chr1.2:2494195-2494214 MS.gene27323:CDS 15.0%
!! AGAGAATTAAAAAAAAAAAC+TGG + chr1.2:2493530-2493549 MS.gene27323:intron 15.0%
!! TATAATAGTTGTATTTATAC+TGG + chr1.2:2496388-2496407 MS.gene27323:CDS 15.0%
!! TTAAAACATCATCAAAAATT+AGG - chr1.2:2492543-2492562 None:intergenic 15.0%
!!! ATATACTTTGTTTATTTTGT+AGG + chr1.2:2496364-2496383 MS.gene27323:intron 15.0%
!! AACATTTCTTATTCTAACTA+TGG + chr1.2:2493046-2493065 MS.gene27323:intron 20.0%
!! AATTGCCAAAATAATCTAAA+GGG - chr1.2:2496185-2496204 None:intergenic 20.0%
!! AGATAAAAGTCATTAGAAAA+TGG - chr1.2:2496155-2496174 None:intergenic 20.0%
!! AGTTAATAACTGATTATTAG+TGG + chr1.2:2496039-2496058 MS.gene27323:intron 20.0%
!! ATGTAATCAGAATTGATATT+TGG - chr1.2:2494564-2494583 None:intergenic 20.0%
!! ATGTGTTTAAACACTATATT+AGG + chr1.2:2495995-2496014 MS.gene27323:intron 20.0%
!! ATTCAATCATCATTCAAAAT+CGG - chr1.2:2493414-2493433 None:intergenic 20.0%
!! ATTCACAAAATTAGAGATTA+TGG - chr1.2:2492662-2492681 None:intergenic 20.0%
!! GTTAATAACTGATTATTAGT+GGG + chr1.2:2496040-2496059 MS.gene27323:intron 20.0%
!! TGTGTTTAAACACTATATTA+GGG + chr1.2:2495996-2496015 MS.gene27323:intron 20.0%
!! TTAATAACTGATTATTAGTG+GGG + chr1.2:2496041-2496060 MS.gene27323:intron 20.0%
!! TTATAAGCAAAATAAGGATA+AGG - chr1.2:2494426-2494445 None:intergenic 20.0%
!!! ATAGAAGAATTTTTAAGTAG+AGG + chr1.2:2493739-2493758 MS.gene27323:intron 20.0%
!!! GTCAATTTCTAAAAATTCTT+AGG - chr1.2:2493714-2493733 None:intergenic 20.0%
!!! TCACTTTTATAAGCAAAATA+AGG - chr1.2:2494432-2494451 None:intergenic 20.0%
!!! TCTTTTTAATCTGTTCTTAA+CGG + chr1.2:2492597-2492616 MS.gene27323:intron 20.0%
!!! TTGTTTATCACTTTAGATTT+TGG + chr1.2:2496252-2496271 MS.gene27323:intron 20.0%
!!! TTTATCCCTTTAGATTATTT+TGG + chr1.2:2496177-2496196 MS.gene27323:intron 20.0%
! AAACAAATGAAAAATGCTAG+CGG - chr1.2:2492566-2492585 None:intergenic 25.0%
! AATAGTTGTATTTATACTGG+AGG + chr1.2:2496391-2496410 MS.gene27323:CDS 25.0%
! AATTGATGAATGAGCAATAA+AGG - chr1.2:2493004-2493023 None:intergenic 25.0%
! ATAAGGATTAATAGCAAAAG+GGG - chr1.2:2494409-2494428 None:intergenic 25.0%
! ATAGTTGTATTTATACTGGA+GGG + chr1.2:2496392-2496411 MS.gene27323:CDS 25.0%
! ATTGATGAATGAGCAATAAA+GGG - chr1.2:2493003-2493022 None:intergenic 25.0%
! CAATTGCCAAAATAATCTAA+AGG - chr1.2:2496186-2496205 None:intergenic 25.0%
! CATGCTATGTTACTATTATA+CGG - chr1.2:2495543-2495562 None:intergenic 25.0%
! GAAATAATCATCTTCCATAA+AGG + chr1.2:2492891-2492910 MS.gene27323:intron 25.0%
! GATAAGGATTAATAGCAAAA+GGG - chr1.2:2494410-2494429 None:intergenic 25.0%
! TAAAGTGATAGAATTCATAC+CGG - chr1.2:2495115-2495134 None:intergenic 25.0%
! TATGCAATGTATGTAGTATT+TGG - chr1.2:2496077-2496096 None:intergenic 25.0%
! TGATGTTGTGATATATGTTT+CGG - chr1.2:2493683-2493702 None:intergenic 25.0%
! TGTGAAAAATCACAAGTTAA+TGG - chr1.2:2495744-2495763 None:intergenic 25.0%
! TTCAATCATCATTCAAAATC+GGG - chr1.2:2493413-2493432 None:intergenic 25.0%
! TTTAGATAACCTAGTTAGAT+TGG - chr1.2:2493627-2493646 None:intergenic 25.0%
!! CTAATTTTGTGAATTACAAC+TGG + chr1.2:2492668-2492687 MS.gene27323:intron 25.0%
!! GTATTAAGTTGTGCATTATT+CGG + chr1.2:2496100-2496119 MS.gene27323:intron 25.0%
!! TAATTATAAGCCCAGTTTTA+AGG - chr1.2:2493324-2493343 None:intergenic 25.0%
!! TTCTTTGTTTCATTAAGTTG+AGG + chr1.2:2492457-2492476 MS.gene27323:intron 25.0%
!!! AAATATTTATTTTCAGCCGT+TGG + chr1.2:2492748-2492767 MS.gene27323:intron 25.0%
!!! GAAGATGATTATTTCTACAA+GGG - chr1.2:2492886-2492905 None:intergenic 25.0%
!!! TAAATATTTTTACTCTCCCA+CGG - chr1.2:2492737-2492756 None:intergenic 25.0%
AACAAAGCGGAATTCTTAAA+CGG + chr1.2:2495352-2495371 MS.gene27323:intron 30.0%
AAGTTATGTGTTAGCTATGA+TGG + chr1.2:2494682-2494701 MS.gene27323:intron 30.0%
AGTATGAATCTGAACTTTAC+TGG - chr1.2:2493135-2493154 None:intergenic 30.0%
ATGAAAATGATGATACTTGG+TGG - chr1.2:2495206-2495225 None:intergenic 30.0%
CAAATTTGGATTATGCTTGT+GGG + chr1.2:2495604-2495623 MS.gene27323:CDS 30.0%
CGTATAATAGTAACATAGCA+TGG + chr1.2:2495541-2495560 MS.gene27323:CDS 30.0%
GATTAATGATTGCAAAATGC+TGG - chr1.2:2495386-2495405 None:intergenic 30.0%
GCTATGAAAATGATGATACT+TGG - chr1.2:2495209-2495228 None:intergenic 30.0%
GGATAAGGATTAATAGCAAA+AGG - chr1.2:2494411-2494430 None:intergenic 30.0%
TGCATAGTGTTTATAGTCTT+CGG + chr1.2:2493479-2493498 MS.gene27323:intron 30.0%
TGGTAAAATTAGGGTTTCTA+CGG + chr1.2:2494272-2494291 MS.gene27323:CDS 30.0%
TGTAACTGAGATTGTAAGAA+GGG - chr1.2:2492391-2492410 None:intergenic 30.0%
TTATAAAAGTGATCCTGGAA+GGG + chr1.2:2494440-2494459 MS.gene27323:CDS 30.0%
TTATTGTCAAATTACCCTAC+TGG + chr1.2:2493103-2493122 MS.gene27323:intron 30.0%
TTGAATTTGATTGAAGACTC+CGG + chr1.2:2495276-2495295 MS.gene27323:intron 30.0%
TTTCTCAGATATCGTAAGAT+AGG - chr1.2:2495836-2495855 None:intergenic 30.0%
TTTGCTTATAAAAGTGATCC+TGG + chr1.2:2494435-2494454 MS.gene27323:CDS 30.0%
! ACTAGATTCTATGGGTTTTA+AGG + chr1.2:2494772-2494791 MS.gene27323:CDS 30.0%
! ATTATTCGGCAAAAGTTGAT+TGG + chr1.2:2496114-2496133 MS.gene27323:intron 30.0%
! TACTATGCACAGTTGATTTA+TGG - chr1.2:2495904-2495923 None:intergenic 30.0%
! TTAGATCCATGTTTCTGATA+AGG + chr1.2:2493215-2493234 MS.gene27323:intron 30.0%
! TTCTCTTGGTGGTAAAATTA+GGG + chr1.2:2494263-2494282 MS.gene27323:CDS 30.0%
! TTGTCGTTTAATAAGGATAC+TGG + chr1.2:2494381-2494400 MS.gene27323:CDS 30.0%
! TTTAAGAATTCCGCTTTGTT+TGG - chr1.2:2495352-2495371 None:intergenic 30.0%
!! CTAGTTTTTGATATTGAGAG+AGG - chr1.2:2493512-2493531 None:intergenic 30.0%
!! GGAAGATGATTATTTCTACA+AGG - chr1.2:2492887-2492906 None:intergenic 30.0%
!! TATATCCTTTAATTTTGCCC+AGG + chr1.2:2492507-2492526 MS.gene27323:intron 30.0%
!! TTTTAAGGATGTTGAGATTG+TGG + chr1.2:2494787-2494806 MS.gene27323:CDS 30.0%
!!! CATCCTTGTTTTCAATGAAT+TGG - chr1.2:2493766-2493785 None:intergenic 30.0%
!!! GAAACAAGTGATTTTGACTT+TGG - chr1.2:2492440-2492459 None:intergenic 30.0%
!!! TATTTTGGCAATTGAGAATG+TGG + chr1.2:2496192-2496211 MS.gene27323:intron 30.0%
AAATTAGGCAAAGTAAGACC+TGG - chr1.2:2492528-2492547 None:intergenic 35.0%
AAGTTCTACACCAAACAAAG+CGG + chr1.2:2495339-2495358 MS.gene27323:intron 35.0%
AATCTCTTCTATCACACTGT+TGG + chr1.2:2495711-2495730 MS.gene27323:CDS 35.0%
AATCTTCAACAGTGCCTTTA+TGG - chr1.2:2492908-2492927 None:intergenic 35.0%
AATTAGGCAAAGTAAGACCT+GGG - chr1.2:2492527-2492546 None:intergenic 35.0%
ACATGGATCTAAACTTCAGA+TGG - chr1.2:2493207-2493226 None:intergenic 35.0%
AGATCTGCACTAGATTCTAT+GGG + chr1.2:2494764-2494783 MS.gene27323:CDS 35.0%
AGTGTGATAGAAGAGATTCA+TGG - chr1.2:2495709-2495728 None:intergenic 35.0%
ATAAAGGGCTACGATGATAA+TGG - chr1.2:2492988-2493007 None:intergenic 35.0%
ATCTCTTCTATCACACTGTT+GGG + chr1.2:2495712-2495731 MS.gene27323:CDS 35.0%
CATGAATATGTTTGATGCTC+AGG + chr1.2:2494533-2494552 MS.gene27323:CDS 35.0%
CTTATAAAAGTGATCCTGGA+AGG + chr1.2:2494439-2494458 MS.gene27323:CDS 35.0%
GCAAATTTGGATTATGCTTG+TGG + chr1.2:2495603-2495622 MS.gene27323:CDS 35.0%
GCATAGTGTTTATAGTCTTC+GGG + chr1.2:2493480-2493499 MS.gene27323:intron 35.0%
GGACCAATTCATTGAAAACA+AGG + chr1.2:2493760-2493779 MS.gene27323:intron 35.0%
GTGTAACTGAGATTGTAAGA+AGG - chr1.2:2492392-2492411 None:intergenic 35.0%
TAAGACCTGGGCAAAATTAA+AGG - chr1.2:2492515-2492534 None:intergenic 35.0%
TAGATCTGCACTAGATTCTA+TGG + chr1.2:2494763-2494782 MS.gene27323:CDS 35.0%
TGCTCAACTACAAGCAAATT+TGG + chr1.2:2495590-2495609 MS.gene27323:CDS 35.0%
TGGCACGAGCAAATAAATTT+AGG - chr1.2:2493580-2493599 None:intergenic 35.0%
TGTGAATTACAACTGGAACT+GGG + chr1.2:2492675-2492694 MS.gene27323:intron 35.0%
TTACTATTATACGGCGTTGT+TGG - chr1.2:2495534-2495553 None:intergenic 35.0%
TTCGAAAAAGTCCGACTATA+CGG + chr1.2:2493979-2493998 MS.gene27323:CDS 35.0%
TTGTGAATTACAACTGGAAC+TGG + chr1.2:2492674-2492693 MS.gene27323:intron 35.0%
! AATGGCGACAAAGATGTTTT+TGG - chr1.2:2492970-2492989 None:intergenic 35.0%
! ATAACCTAGTTAGATTGGCT+CGG - chr1.2:2493622-2493641 None:intergenic 35.0%
! CTTCTCTTGGTGGTAAAATT+AGG + chr1.2:2494262-2494281 MS.gene27323:CDS 35.0%
! GAATATAGTACCGTTTTGCA+GGG + chr1.2:2494354-2494373 MS.gene27323:CDS 35.0%
! TATTTCTACAAGGGTGGATT+TGG - chr1.2:2492877-2492896 None:intergenic 35.0%
! TGAATATAGTACCGTTTTGC+AGG + chr1.2:2494353-2494372 MS.gene27323:CDS 35.0%
! TTTTATCGTGTGAATTGTGC+AGG + chr1.2:2494730-2494749 MS.gene27323:intron 35.0%
! TTTTGCATGTTCTGTATAGC+TGG - chr1.2:2494228-2494247 None:intergenic 35.0%
!! AAAGTTGATTGGTTCTGACT+TGG + chr1.2:2496125-2496144 MS.gene27323:intron 35.0%
!! ACTTTTGGCGTTGAATTCAT+AGG - chr1.2:2495504-2495523 None:intergenic 35.0%
!! CTTTGTTTGGTGTAGAACTT+GGG - chr1.2:2495339-2495358 None:intergenic 35.0%
!! GATGATTATTTCTACAAGGG+TGG - chr1.2:2492883-2492902 None:intergenic 35.0%
!! GGGTTTGTTGTCGTTTAATA+AGG + chr1.2:2494374-2494393 MS.gene27323:CDS 35.0%
!! TCAAGATTTTATGAGTGTCG+AGG + chr1.2:2494601-2494620 MS.gene27323:intron 35.0%
!! TTTACTGGAAAGTACCAGTA+GGG - chr1.2:2493120-2493139 None:intergenic 35.0%
!!! GATGTCGGTTTTGAAAAACT+CGG + chr1.2:2494302-2494321 MS.gene27323:CDS 35.0%
AAACCGCATGAGAACTTACT+TGG - chr1.2:2495792-2495811 None:intergenic 40.0%
AACCCAAGTAAGTTCTCATG+CGG + chr1.2:2495786-2495805 MS.gene27323:intron 40.0%
AACCGCATGAGAACTTACTT+GGG - chr1.2:2495791-2495810 None:intergenic 40.0%
AATTCATACCGGAGATACCA+CGG - chr1.2:2495104-2495123 None:intergenic 40.0%
AGATTGTAAGAAGGGTTGTG+AGG - chr1.2:2492383-2492402 None:intergenic 40.0%
AGTATTTGCATCAACTCGAC+CGG - chr1.2:2494502-2494521 None:intergenic 40.0%
CATAGTTTACTCCGAGGAAT+GGG - chr1.2:2493897-2493916 None:intergenic 40.0%
CATCTTTGCCTTGTATGATG+AGG + chr1.2:2494958-2494977 MS.gene27323:CDS 40.0%
CATGAGCTTTCACTATCCAA+CGG - chr1.2:2492767-2492786 None:intergenic 40.0%
CTTCAAGTCCTCATCATACA+AGG - chr1.2:2494969-2494988 None:intergenic 40.0%
GAGAATGCAAAGGCTTACAA+TGG + chr1.2:2494866-2494885 MS.gene27323:CDS 40.0%
GATTGTAGCTTAATCCAACC+AGG + chr1.2:2495636-2495655 MS.gene27323:CDS 40.0%
GCCTTTGCATTCTCAATACT+CGG - chr1.2:2494860-2494879 None:intergenic 40.0%
TACTTTATCCTTCGTGTGCA+TGG + chr1.2:2494625-2494644 MS.gene27323:intron 40.0%
TCATGAAAACTTCCAGCAGA+AGG - chr1.2:2494333-2494352 None:intergenic 40.0%
TCGTCGTTATCTCCTTTGTA+AGG - chr1.2:2494830-2494849 None:intergenic 40.0%
TGTGAGGAAACTTACTTGCA+AGG - chr1.2:2492367-2492386 None:intergenic 40.0%
TGTTTATAGTCTTCGGGTCA+AGG + chr1.2:2493486-2493505 MS.gene27323:intron 40.0%
TTACAAAGGAGATAACGACG+AGG + chr1.2:2494829-2494848 MS.gene27323:CDS 40.0%
TTCTACGGTTCATACGATGT+CGG + chr1.2:2494287-2494306 MS.gene27323:CDS 40.0%
TTCTCTATTCTCTCTCCTCT+TGG + chr1.2:2492840-2492859 MS.gene27323:intron 40.0%
! ACTGGAGTTTTCGATACTTC+CGG - chr1.2:2495298-2495317 None:intergenic 40.0%
! CCATGTTTCTGATAAGGTGT+GGG + chr1.2:2493221-2493240 MS.gene27323:intron 40.0%
! GCATCAGTTAATCCTGCTTT+TGG - chr1.2:2495573-2495592 None:intergenic 40.0%
! GCATGGTTAGCTAATGTGTT+AGG - chr1.2:2495678-2495697 None:intergenic 40.0%
! GTTGTTGGACTTGGAACTTT+TGG - chr1.2:2495519-2495538 None:intergenic 40.0%
! TAGTGCTTTGTTGCTTAGAG+AGG - chr1.2:2495060-2495079 None:intergenic 40.0%
! TCCATGTTTCTGATAAGGTG+TGG + chr1.2:2493220-2493239 MS.gene27323:intron 40.0%
! TGATGATACTTGGTGGTTGA+AGG - chr1.2:2495199-2495218 None:intergenic 40.0%
!! AAGGCACTGTTGAAGATTTC+TGG + chr1.2:2492910-2492929 MS.gene27323:intron 40.0%
!! ACCGAGTATTGAGAATGCAA+AGG + chr1.2:2494856-2494875 MS.gene27323:CDS 40.0%
!! CTTTACTGGAAAGTACCAGT+AGG - chr1.2:2493121-2493140 None:intergenic 40.0%
!! GATTTTGGCAATTGAGAGTG+TGG + chr1.2:2496267-2496286 MS.gene27323:intron 40.0%
!! GCTTTGTTTGGTGTAGAACT+TGG - chr1.2:2495340-2495359 None:intergenic 40.0%
!!! GTATAGTCGGACTTTTTCGA+AGG - chr1.2:2493980-2493999 None:intergenic 40.0%
!!! TGCCTTTTTCAACCTAATGC+CGG + chr1.2:2494480-2494499 MS.gene27323:CDS 40.0%
AACATCATCCTCATCACCGT+GGG + chr1.2:2494153-2494172 MS.gene27323:CDS 45.0%
ACCGGAATCGGAATCGTAAT+CGG + chr1.2:2494036-2494055 MS.gene27323:CDS 45.0%
AGGAGAGAGAATAGAGAACG+TGG - chr1.2:2492838-2492857 None:intergenic 45.0%
ATCAGTGTTGTAAAGCCCGA+AGG - chr1.2:2495014-2495033 None:intergenic 45.0%
ATCCAAGTTTCGCCAAAACC+TGG + chr1.2:2494094-2494113 MS.gene27323:CDS 45.0%
ATTCATACCGGAGATACCAC+GGG - chr1.2:2495103-2495122 None:intergenic 45.0%
CAAACGATGATCTATGACGC+TGG + chr1.2:2495034-2495053 MS.gene27323:CDS 45.0%
CCATAGTTTACTCCGAGGAA+TGG - chr1.2:2493898-2493917 None:intergenic 45.0%
CCATTCCTCGGAGTAAACTA+TGG + chr1.2:2493895-2493914 MS.gene27323:CDS 45.0%
CCCACACCTTATCAGAAACA+TGG - chr1.2:2493224-2493243 None:intergenic 45.0%
CGACAACAAACCCTGCAAAA+CGG - chr1.2:2494367-2494386 None:intergenic 45.0%
CTTGATAAGTCTCTCACCGT+GGG + chr1.2:2492718-2492737 MS.gene27323:intron 45.0%
CTTGATGAAGCTTCTCTTGG+TGG + chr1.2:2494252-2494271 MS.gene27323:CDS 45.0%
GATTAAGCACCTGCGATCTA+AGG + chr1.2:2494895-2494914 MS.gene27323:CDS 45.0%
GGAGAGAGAATAGAGAACGT+GGG - chr1.2:2492837-2492856 None:intergenic 45.0%
GGATGTTGAGATTGTGGTTG+CGG + chr1.2:2494793-2494812 MS.gene27323:CDS 45.0%
GTTGGCGAGGGATTTGATTA+TGG - chr1.2:2494016-2494035 None:intergenic 45.0%
GTTTCTGATAAGGTGTGGGA+GGG + chr1.2:2493225-2493244 MS.gene27323:intron 45.0%
TATCGTGTGAATTGTGCAGG+TGG + chr1.2:2494733-2494752 MS.gene27323:intron 45.0%
TATGATGAGGACTTGAAGCC+TGG + chr1.2:2494971-2494990 MS.gene27323:CDS 45.0%
TCCGATTACGATTCCGATTC+CGG - chr1.2:2494040-2494059 None:intergenic 45.0%
TCCTGGAAGGGCTGATAATT+TGG + chr1.2:2494452-2494471 MS.gene27323:CDS 45.0%
TGAAAACTTCCAGCAGAAGG+TGG - chr1.2:2494330-2494349 None:intergenic 45.0%
TGTAGCTTAATCCAACCAGG+AGG + chr1.2:2495639-2495658 MS.gene27323:CDS 45.0%
TTATACGGCGTTGTTGGACT+TGG - chr1.2:2495528-2495547 None:intergenic 45.0%
TTGGACAAGGAAGAACCAAG+AGG - chr1.2:2492858-2492877 None:intergenic 45.0%
TTGGATTATGCTTGTGGGCA+GGG + chr1.2:2495609-2495628 MS.gene27323:CDS 45.0%
TTTGGATTATGCTTGTGGGC+AGG + chr1.2:2495608-2495627 MS.gene27323:CDS 45.0%
! ACTTGGTGGTTGAAGGTTCA+TGG - chr1.2:2495192-2495211 None:intergenic 45.0%
! GGATTTGATTATGGCGGGAT+CGG - chr1.2:2494007-2494026 None:intergenic 45.0%
! TACAAGGGTGGATTTGGACA+AGG - chr1.2:2492871-2492890 None:intergenic 45.0%
! TGTTTCTGATAAGGTGTGGG+AGG + chr1.2:2493224-2493243 MS.gene27323:intron 45.0%
!! ATCCAGGTTTTGGCGAAACT+TGG - chr1.2:2494099-2494118 None:intergenic 45.0%
!! CTAGAAGGCGCCTTAAAACT+GGG + chr1.2:2493311-2493330 MS.gene27323:intron 45.0%
!! GACCGGCATTAGGTTGAAAA+AGG - chr1.2:2494485-2494504 None:intergenic 45.0%
!! GGTTTTGGCGAAACTTGGAT+CGG - chr1.2:2494094-2494113 None:intergenic 45.0%
!! GTTGGTGGAAATCCAGGTTT+TGG - chr1.2:2494109-2494128 None:intergenic 45.0%
!! TATGTGTCCACTGATTTCCC+TGG - chr1.2:2494938-2494957 None:intergenic 45.0%
!!! CAGTTTTAAGGCGCCTTCTA+GGG - chr1.2:2493312-2493331 None:intergenic 45.0%
!!! TAGTCGGACTTTTTCGAAGG+CGG - chr1.2:2493977-2493996 None:intergenic 45.0%
!!! TATTTGATAATATATATAAT+GGG + chr1.2:2493178-2493197 MS.gene27323:intron 5.0%
AAAGGAGATAACGACGAGGC+TGG + chr1.2:2494833-2494852 MS.gene27323:CDS 50.0%
ACTGATGCCAGGGAAATCAG+TGG + chr1.2:2494928-2494947 MS.gene27323:CDS 50.0%
ACTTGACTCCATGCACACGA+AGG - chr1.2:2494636-2494655 None:intergenic 50.0%
AGTGATGACTTCGTTGCCCA+CGG - chr1.2:2494172-2494191 None:intergenic 50.0%
ATAGTAAGGGAGGACGTTGG+TGG - chr1.2:2494124-2494143 None:intergenic 50.0%
ATCAAATCCCTCGCCAACAC+CGG + chr1.2:2494018-2494037 MS.gene27323:CDS 50.0%
ATCGTAATCGGAGCCGCAAA+CGG + chr1.2:2494048-2494067 MS.gene27323:CDS 50.0%
ATGAGGATGATGTTGCTGGC+GGG - chr1.2:2494147-2494166 None:intergenic 50.0%
ATGTTGCTGGCGGGATAGTA+AGG - chr1.2:2494138-2494157 None:intergenic 50.0%
CAAAACAAGCACCTCCTGGT+TGG - chr1.2:2495653-2495672 None:intergenic 50.0%
CAACATCATCCTCATCACCG+TGG + chr1.2:2494152-2494171 MS.gene27323:CDS 50.0%
CTAGGGTGGGAGAGCTTAAT+AGG - chr1.2:2493295-2493314 None:intergenic 50.0%
CTTAATAGGTCTCCCACCGT+GGG - chr1.2:2493281-2493300 None:intergenic 50.0%
CTTGGCCATAGTTTACTCCG+AGG - chr1.2:2493903-2493922 None:intergenic 50.0%
GAAACTTGGATCGGAAGCGA+GGG - chr1.2:2494085-2494104 None:intergenic 50.0%
GATGAGGATGATGTTGCTGG+CGG - chr1.2:2494148-2494167 None:intergenic 50.0%
GATTCATGGCGTATGCAGCA+TGG - chr1.2:2495695-2495714 None:intergenic 50.0%
GCAGAATCTGACCCATTCCT+CGG + chr1.2:2493883-2493902 MS.gene27323:intron 50.0%
GCCAAATTATCAGCCCTTCC+AGG - chr1.2:2494456-2494475 None:intergenic 50.0%
GCGAGGGATTTGATTATGGC+GGG - chr1.2:2494012-2494031 None:intergenic 50.0%
GCGCTTGATGAAGCTTCTCT+TGG + chr1.2:2494249-2494268 MS.gene27323:CDS 50.0%
GCTTGATAAGTCTCTCACCG+TGG + chr1.2:2492717-2492736 MS.gene27323:intron 50.0%
GGCGAGGGATTTGATTATGG+CGG - chr1.2:2494013-2494032 None:intergenic 50.0%
GGTGATGAGGATGATGTTGC+TGG - chr1.2:2494151-2494170 None:intergenic 50.0%
GGTTCAAAACAAGCACCTCC+TGG - chr1.2:2495657-2495676 None:intergenic 50.0%
TACGATTCCGATTCCGGTGT+TGG - chr1.2:2494034-2494053 None:intergenic 50.0%
TGTTGCTGGCGGGATAGTAA+GGG - chr1.2:2494137-2494156 None:intergenic 50.0%
TTAAGCTCTCCCACCCTAGA+AGG + chr1.2:2493296-2493315 MS.gene27323:intron 50.0%
TTACAACTGGAACTGGGCCA+AGG + chr1.2:2492681-2492700 MS.gene27323:intron 50.0%
TTCATACCGGAGATACCACG+GGG - chr1.2:2495102-2495121 None:intergenic 50.0%
! AAGCACCTGCGATCTAAGGT+TGG + chr1.2:2494899-2494918 MS.gene27323:CDS 50.0%
! ACTGATTTCCCTGGCATCAG+TGG - chr1.2:2494929-2494948 None:intergenic 50.0%
! AGCACCTGCGATCTAAGGTT+GGG + chr1.2:2494900-2494919 MS.gene27323:CDS 50.0%
!! ACCTAGTTAGATTGGCTCGG+TGG - chr1.2:2493619-2493638 None:intergenic 50.0%
!! CCTAGAAGGCGCCTTAAAAC+TGG + chr1.2:2493310-2493329 MS.gene27323:intron 50.0%
!! CCTAGTTAGATTGGCTCGGT+GGG - chr1.2:2493618-2493637 None:intergenic 50.0%
!! CTGGTTCTGAGAAAGCCTTC+GGG + chr1.2:2494996-2495015 MS.gene27323:CDS 50.0%
!! CTTTTTCACTCACCCACGGT+GGG + chr1.2:2493266-2493285 MS.gene27323:intron 50.0%
!! GAGACAGGTTGGCCTTACAA+AGG + chr1.2:2494815-2494834 MS.gene27323:CDS 50.0%
!! GCTGGTTCTGAGAAAGCCTT+CGG + chr1.2:2494995-2495014 MS.gene27323:CDS 50.0%
!! GGTGGTTTGGAGGAGTTTTG+CGG - chr1.2:2493956-2493975 None:intergenic 50.0%
!! GTGGGATTGGTTTGAGAGCT+TGG - chr1.2:2493600-2493619 None:intergenic 50.0%
!! TTAGATTGGCTCGGTGGGAT+TGG - chr1.2:2493613-2493632 None:intergenic 50.0%
!! TTTAAGGCGCCTTCTAGGGT+GGG - chr1.2:2493308-2493327 None:intergenic 50.0%
!!! CCAGTTTTAAGGCGCCTTCT+AGG - chr1.2:2493313-2493332 None:intergenic 50.0%
!!! CTTTTTCGAAGGCGGTGGTT+TGG - chr1.2:2493969-2493988 None:intergenic 50.0%
!!! GCTGCTTTTTCACTCACCCA+CGG + chr1.2:2493262-2493281 MS.gene27323:intron 50.0%
!!! TTTTAAGGCGCCTTCTAGGG+TGG - chr1.2:2493309-2493328 None:intergenic 50.0%
ACGGGGCTACTAGTAGGTGT+AGG - chr1.2:2495085-2495104 None:intergenic 55.0%
CCAGTGATTCCAGCACCAAC+AGG + chr1.2:2495313-2495332 MS.gene27323:intron 55.0%
CCCACCGAGCCAATCTAACT+AGG + chr1.2:2493615-2493634 MS.gene27323:intron 55.0%
CGAAACTTGGATCGGAAGCG+AGG - chr1.2:2494086-2494105 None:intergenic 55.0%
GAGATTGTGGTTGCGGAGAC+AGG + chr1.2:2494800-2494819 MS.gene27323:CDS 55.0%
GATACCACGGGGCTACTAGT+AGG - chr1.2:2495091-2495110 None:intergenic 55.0%
GCATCAACTCGACCGGCATT+AGG - chr1.2:2494495-2494514 None:intergenic 55.0%
GCATGGTGTGTGCCAAAAGC+AGG + chr1.2:2495558-2495577 MS.gene27323:CDS 55.0%
GCTTAATAGGTCTCCCACCG+TGG - chr1.2:2493282-2493301 None:intergenic 55.0%
GCTTTCTCAGAACCAGCTCC+AGG - chr1.2:2494992-2495011 None:intergenic 55.0%
GGATGCTGGTGGAAGGTTGT+CGG - chr1.2:2493929-2493948 None:intergenic 55.0%
GGGATAGTAAGGGAGGACGT+TGG - chr1.2:2494127-2494146 None:intergenic 55.0%
GGTGTAGAACTTGGGCCTGT+TGG - chr1.2:2495331-2495350 None:intergenic 55.0%
GTGTCCCAACCTTAGATCGC+AGG - chr1.2:2494907-2494926 None:intergenic 55.0%
TACACCTACTAGTAGCCCCG+TGG + chr1.2:2495084-2495103 MS.gene27323:CDS 55.0%
TAGTAGCCCCGTGGTATCTC+CGG + chr1.2:2495093-2495112 MS.gene27323:CDS 55.0%
TTGGGACACCACTGATGCCA+GGG + chr1.2:2494918-2494937 MS.gene27323:CDS 55.0%
TTGTGGTTGCGGAGACAGGT+TGG + chr1.2:2494804-2494823 MS.gene27323:CDS 55.0%
! CGGGATCGGTTCCGTATAGT+CGG - chr1.2:2493993-2494012 None:intergenic 55.0%
! GAGGACGTTGGTGGAAATCC+AGG - chr1.2:2494115-2494134 None:intergenic 55.0%
! GGTTTGGAGGAGTTTTGCGG+TGG - chr1.2:2493953-2493972 None:intergenic 55.0%
! TTGGAGGAGTTTTGCGGTGG+CGG - chr1.2:2493950-2493969 None:intergenic 55.0%
! TTTCGAAGGCGGTGGTTTGG+AGG - chr1.2:2493966-2493985 None:intergenic 55.0%
!! CCTGTTGGTGCTGGAATCAC+TGG - chr1.2:2495316-2495335 None:intergenic 55.0%
!!! GCTTTTTCACTCACCCACGG+TGG + chr1.2:2493265-2493284 MS.gene27323:intron 55.0%
!!! TCGGACTTTTTCGAAGGCGG+TGG - chr1.2:2493974-2493993 None:intergenic 55.0%
AACTCGGAGCCACCTTCTGC+TGG + chr1.2:2494318-2494337 MS.gene27323:CDS 60.0%
AACTGGGCCAAGGCTAGGGT+GGG + chr1.2:2492691-2492710 MS.gene27323:intron 60.0%
AAGCTCTCCCACCCTAGCCT+TGG - chr1.2:2492701-2492720 None:intergenic 60.0%
ACTGGAACTGGGCCAAGGCT+AGG + chr1.2:2492686-2492705 MS.gene27323:intron 60.0%
ACTTGGATCGGAAGCGAGGG+AGG - chr1.2:2494082-2494101 None:intergenic 60.0%
CTGGAACTGGGCCAAGGCTA+GGG + chr1.2:2492687-2492706 MS.gene27323:intron 60.0%
CTTCGTTGCCCACGGTGATG+AGG - chr1.2:2494164-2494183 None:intergenic 60.0%
CTTGGATCGGAAGCGAGGGA+GGG - chr1.2:2494081-2494100 None:intergenic 60.0%
GAACTTGGGCCTGTTGGTGC+TGG - chr1.2:2495325-2495344 None:intergenic 60.0%
GAGGACTTGAAGCCTGGAGC+TGG + chr1.2:2494977-2494996 MS.gene27323:CDS 60.0%
GTGGAAGGTTGTCGGCGACT+TGG - chr1.2:2493921-2493940 None:intergenic 60.0%
GTTGGGACACCACTGATGCC+AGG + chr1.2:2494917-2494936 MS.gene27323:CDS 60.0%
TCCCTCGCCAACACCGGAAT+CGG + chr1.2:2494024-2494043 MS.gene27323:CDS 60.0%
TGCTGGCGGGATAGTAAGGG+AGG - chr1.2:2494134-2494153 None:intergenic 60.0%
! GGAGGGTATGTCGCCGTTTG+CGG - chr1.2:2494064-2494083 None:intergenic 60.0%
!! TCCGATTCCGGTGTTGGCGA+GGG - chr1.2:2494028-2494047 None:intergenic 60.0%
!! TTCCGATTCCGGTGTTGGCG+AGG - chr1.2:2494029-2494048 None:intergenic 60.0%
!!! AGTTTTGCGGTGGCGGATGC+TGG - chr1.2:2493943-2493962 None:intergenic 60.0%
GAACTGGGCCAAGGCTAGGG+TGG + chr1.2:2492690-2492709 MS.gene27323:intron 65.0%
!! TTTGCGGTGGCGGATGCTGG+TGG - chr1.2:2493940-2493959 None:intergenic 65.0%
!! CGGTGGCGGATGCTGGTGGA+AGG - chr1.2:2493936-2493955 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 2492317 2496423 2492317 ID=MS.gene27323
chr1.2 mRNA 2492317 2496423 2492317 ID=MS.gene27323.t1;Parent=MS.gene27323
chr1.2 exon 2492317 2492371 2492317 ID=MS.gene27323.t1.exon1;Parent=MS.gene27323.t1
chr1.2 CDS 2492317 2492371 2492317 ID=cds.MS.gene27323.t1;Parent=MS.gene27323.t1
chr1.2 exon 2493887 2494554 2493887 ID=MS.gene27323.t1.exon2;Parent=MS.gene27323.t1
chr1.2 CDS 2493887 2494554 2493887 ID=cds.MS.gene27323.t1;Parent=MS.gene27323.t1
chr1.2 exon 2494752 2495114 2494752 ID=MS.gene27323.t1.exon3;Parent=MS.gene27323.t1
chr1.2 CDS 2494752 2495114 2494752 ID=cds.MS.gene27323.t1;Parent=MS.gene27323.t1
chr1.2 exon 2495477 2495792 2495477 ID=MS.gene27323.t1.exon4;Parent=MS.gene27323.t1
chr1.2 CDS 2495477 2495792 2495477 ID=cds.MS.gene27323.t1;Parent=MS.gene27323.t1
chr1.2 exon 2496386 2496423 2496386 ID=MS.gene27323.t1.exon5;Parent=MS.gene27323.t1
chr1.2 CDS 2496386 2496423 2496386 ID=cds.MS.gene27323.t1;Parent=MS.gene27323.t1
Gene Sequence

>MS.gene27323

ATGACAAGAATGGTTTCTGGCTTTCTTCTACTCTTTCTCGCATTCAACCTTGCAAGTAAGTTTCCTCACAACCCTTCTTACAATCTCAGTTACACTTACACATGAAGCTTTTGTCTTACTCCAAAGTCAAAATCACTTGTTTCTTTGTTTCATTAAGTTGAGGAAACGAAGACAAATATTAAATTATTGATATATCCTTTAATTTTGCCCAGGTCTTACTTTGCCTAATTTTTGATGATGTTTTAACCGCTAGCATTTTTCATTTGTTTACTTTTACAGCTCTTTTTAATCTGTTCTTAACGGAAAAAGTAAAGTGAAGTTTCTATTTTTGTTTAAAATAGTCCATAATCTCTAATTTTGTGAATTACAACTGGAACTGGGCCAAGGCTAGGGTGGGAGAGCTTGATAAGTCTCTCACCGTGGGAGAGTAAAAATATTTATTTTCAGCCGTTGGATAGTGAAAGCTCATGATTACTATCATACTCTAACAACTCTAAATACATTTTATTTCATCTCACCCACGTTCTCTATTCTCTCTCCTCTTGGTTCTTCCTTGTCCAAATCCACCCTTGTAGAAATAATCATCTTCCATAAAGGCACTGTTGAAGATTTCTGGAAAGAATCATTATGCTATCAGCTAAGAAACAAATCCAAAAACATCTTTGTCGCCATTATCATCGTAGCCCTTTATTGCTCATTCATCAATTGAAGTTGTTTAATTGAATTTTAAACATTTCTTATTCTAACTATGGAAATTTCTTTGAACATTTCAATTGAATTTGAAACTTATTGTCAAATTACCCTACTGGTACTTTCCAGTAAAGTTCAGATTCATACTTCTCTTGAAGAAACAATTTTGCCTATTTGATAATATATATAATGGGTATCCATCTGAAGTTTAGATCCATGTTTCTGATAAGGTGTGGGAGGGTGTACGATGCACTTGCTGCTTTTTCACTCACCCACGGTGGGAGACCTATTAAGCTCTCCCACCCTAGAAGGCGCCTTAAAACTGGGCTTATAATTACAAGAGAGTTGCTTGATAAAAAAAAATCAAAAGTTATGTGTGAATGATTTGAATCGTTACAAAGAACCCGATTTTGAATGATGATTGAATGATCATTTGTAAAATTTCATTTACTTTTTTTTGACAAAGTCAAATTGCATAGTGTTTATAGTCTTCGGGTCAAGGCCTCTCTCAATATCAAAAACTAGAGAATTAAAAAAAAAAACTGGCTTAATTTTGAAACTTTTTAAACTCCTAAATTTATTTGCTCGTGCCAAGCTCTCAAACCAATCCCACCGAGCCAATCTAACTAGGTTATCTAAATTACTATATATCAATTTGTATGTCATATATCATCCGAAACATATATCACAACATCATTTTTTAGCCTAAGAATTTTTAGAAATTGACGAAAAATAGAAGAATTTTTAAGTAGAGGACCAATTCATTGAAAACAAGGATGCAAAAATATAATTAAACAAAAAATTTACTTCAGAAAGTTAATTTTTTAAATTACTAACGTAATTTTTTTTAAAAATTTACACAGTTTATTGTTGTGTGCAGAATCTGACCCATTCCTCGGAGTAAACTATGGCCAAGTCGCCGACAACCTTCCACCAGCATCCGCCACCGCAAAACTCCTCCAAACCACCGCCTTCGAAAAAGTCCGACTATACGGAACCGATCCCGCCATAATCAAATCCCTCGCCAACACCGGAATCGGAATCGTAATCGGAGCCGCAAACGGCGACATACCCTCCCTCGCTTCCGATCCAAGTTTCGCCAAAACCTGGATTTCCACCAACGTCCTCCCTTACTATCCCGCCAGCAACATCATCCTCATCACCGTGGGCAACGAAGTCATCACTTCAAATGATACAAATCTTATTAACGGAATGTTACCAGCTATACAGAACATGCAAAAAGCGCTTGATGAAGCTTCTCTTGGTGGTAAAATTAGGGTTTCTACGGTTCATACGATGTCGGTTTTGAAAAACTCGGAGCCACCTTCTGCTGGAAGTTTTCATGATGAATATAGTACCGTTTTGCAGGGTTTGTTGTCGTTTAATAAGGATACTGGTTCCCCTTTTGCTATTAATCCTTATCCTTATTTTGCTTATAAAAGTGATCCTGGAAGGGCTGATAATTTGGCTTTTTGCCTTTTTCAACCTAATGCCGGTCGAGTTGATGCAAATACTAAGCTCAATTACATGAATATGTTTGATGCTCAGGTTAGTCCAAATATCAATTCTGATTACATTCAATTATGTCATTTTCTCAAGATTTTATGAGTGTCGAGGTTACTTTATCCTTCGTGTGCATGGAGTCAAGTAATATAACTCTTGTATTTGAGCGAAAAAGTTATGTGTTAGCTATGATGGTAATCTTGAAGTCTAAAGTGCATGTTTTTATCGTGTGAATTGTGCAGGTGGATGCTGTTAGATCTGCACTAGATTCTATGGGTTTTAAGGATGTTGAGATTGTGGTTGCGGAGACAGGTTGGCCTTACAAAGGAGATAACGACGAGGCTGGACCGAGTATTGAGAATGCAAAGGCTTACAATGGTAATCTGATTAAGCACCTGCGATCTAAGGTTGGGACACCACTGATGCCAGGGAAATCAGTGGACACATACATCTTTGCCTTGTATGATGAGGACTTGAAGCCTGGAGCTGGTTCTGAGAAAGCCTTCGGGCTTTACAACACTGATCAAACGATGATCTATGACGCTGGCCTCTCTAAGCAACAAAGCACTACTCCTACACCTACTAGTAGCCCCGTGGTATCTCCGGTATGAATTCTATCACTTTATTACATTATTACATCATCATTCATTAAATATCATCATTGATTAATGAGCATAAACCATGAACCTTCAACCACCAAGTATCATCATTTTCATAGCTCTCATCTTGAAACTGTTCTAGAGTACTTGCTCTTAACTATGTATTTTTGAATTTGATTGAAGACTCCGGAAGTATCGAAAACTCCAGTGATTCCAGCACCAACAGGCCCAAGTTCTACACCAAACAAAGCGGAATTCTTAAACGGACATGAAGCCAGCATTTTGCAATCATTAATCATGCTCACATATCTTATCTTAATGTTGTTCTAGTAGTGTATAACATTTTGTAATTCTGAATTTTATTGAAGATTAATCAAGATGTGTCAAAATCTCCTATGAATTCAACGCCAAAAGTTCCAAGTCCAACAACGCCGTATAATAGTAACATAGCATGGTGTGTGCCAAAAGCAGGATTAACTGATGCTCAACTACAAGCAAATTTGGATTATGCTTGTGGGCAGGGAATTGATTGTAGCTTAATCCAACCAGGAGGTGCTTGTTTTGAACCTAACACATTAGCTAACCATGCTGCATACGCCATGAATCTCTTCTATCACACTGTTGGGCAAAATCCATTAACTTGTGATTTTTCACAAACAGCTACACTAACATCAAATAACCCAAGTAAGTTCTCATGCGGTTTTTGTACGACATTTTTTTTGTTCCTATCTTACGATATCTGAGAAATTCAAATTTTCTATAGTGAGAAATTCTCTAAAGCTATAATCTCAACCATAAATCAACTGTGCATAGTATGTGCAAAATTACAACAAATTATAAAATGTGTTTGAACAACAACATCAATTGATTTTCTTGTCAACAATCAATGTGTTTAAACACTATATTAGGGTCTTGTATTCTCTATTAATTAGTTAATAACTGATTATTAGTGGGGAAAAACTTGTCCAAATACTACATACATTGCATAAAAGTATTAAGTTGTGCATTATTCGGCAAAAGTTGATTGGTTCTGACTTGGTACACCATTTTCTAATGACTTTTATCTTGTTTATCCCTTTAGATTATTTTGGCAATTGAGAATGTGGAAGTGTTTTATTTTCTGAAAGTTTTATGACTTTTGTCTTGTTTATCACTTTAGATTTTGGCAATTGAGAGTGTGGAAGATATGATTTTAAATTTCTAGACGATTGAACTACTTTGATTATTTTACTAAATTGAATGCTCACTTTACAATATATACTTTGTTTATTTTGTAGGTTATAATAGTTGTATTTATACTGGAGGGAATGCATAA
Protein sequence

>MS.gene27323.t1

MTRMVSGFLLLFLAFNLAKSDPFLGVNYGQVADNLPPASATAKLLQTTAFEKVRLYGTDPAIIKSLANTGIGIVIGAANGDIPSLASDPSFAKTWISTNVLPYYPASNIILITVGNEVITSNDTNLINGMLPAIQNMQKALDEASLGGKIRVSTVHTMSVLKNSEPPSAGSFHDEYSTVLQGLLSFNKDTGSPFAINPYPYFAYKSDPGRADNLAFCLFQPNAGRVDANTKLNYMNMFDAQVDAVRSALDSMGFKDVEIVVAETGWPYKGDNDEAGPSIENAKAYNGNLIKHLRSKVGTPLMPGKSVDTYIFALYDEDLKPGAGSEKAFGLYNTDQTMIYDAGLSKQQSTTPTPTSSPVVSPINQDVSKSPMNSTPKVPSPTTPYNSNIAWCVPKAGLTDAQLQANLDYACGQGIDCSLIQPGGACFEPNTLANHAAYAMNLFYHTVGQNPLTCDFSQTATLTSNNPSYNSCIYTGGNA