AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27408

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27408.t1 MTR_6g074905 70.191 1097 108 13 30 965 135 1173 0.0 1386
MS.gene27408.t1 MTR_6g074905 94.118 34 2 0 1 34 1132 1165 1.20e-12 72.8
MS.gene27408.t1 MTR_6g074870 61.215 428 74 8 492 908 1 347 3.84e-150 448
MS.gene27408.t1 MTR_5g082700 57.650 366 124 5 611 963 365 712 5.19e-136 425
MS.gene27408.t1 MTR_0349s0030 77.444 266 46 3 711 965 31 293 1.03e-132 401
MS.gene27408.t1 MTR_0349s0030 94.118 34 2 0 1 34 252 285 1.71e-13 72.8
MS.gene27408.t1 MTR_5g082700 58.586 297 99 4 611 901 365 643 3.66e-107 347
MS.gene27408.t1 MTR_5g082700 67.511 237 64 1 611 847 365 588 8.08e-106 342
MS.gene27408.t1 MTR_6g074640 54.438 338 44 8 629 965 11 239 4.96e-96 303
MS.gene27408.t1 MTR_6g074640 88.235 34 4 0 1 34 198 231 3.69e-12 67.8
MS.gene27408.t1 MTR_8g069620 79.021 143 17 1 628 770 23 152 3.91e-71 234
MS.gene27408.t1 MTR_6g074750 81.013 79 15 0 769 847 18 96 2.63e-39 142
MS.gene27408.t1 MTR_8g070930 31.217 378 174 13 648 962 138 492 4.48e-35 145
MS.gene27408.t1 MTR_6g074670 73.077 78 10 1 877 943 45 122 7.42e-29 112
MS.gene27408.t1 MTR_6g074480 95.833 48 2 0 918 965 30 77 2.95e-26 103
MS.gene27408.t1 MTR_6g074480 94.118 34 2 0 1 34 36 69 3.17e-15 72.0
MS.gene27408.t1 MTR_1g111180 27.168 346 196 12 644 957 671 992 8.46e-25 112
MS.gene27408.t1 MTR_1g111180 27.168 346 196 12 644 957 670 991 8.75e-25 112
MS.gene27408.t1 MTR_5g091680 26.687 326 193 10 646 956 19 313 5.86e-19 91.3
MS.gene27408.t1 MTR_5g091680 26.687 326 193 10 646 956 19 313 5.89e-19 91.7
MS.gene27408.t1 MTR_4g117490 24.845 322 202 10 648 957 24 317 6.10e-19 92.0
MS.gene27408.t1 MTR_5g091680 26.687 326 193 10 646 956 19 313 6.81e-19 91.7
MS.gene27408.t1 MTR_5g091680 26.687 326 193 10 646 956 17 311 7.10e-19 91.7
MS.gene27408.t1 MTR_2g021330 25.234 321 200 10 648 956 24 316 1.21e-18 91.3
MS.gene27408.t1 MTR_3g109390 25.330 379 200 13 632 959 55 401 6.39e-18 87.8
MS.gene27408.t1 MTR_3g109390 25.330 379 200 13 632 959 33 379 6.88e-18 87.4
MS.gene27408.t1 MTR_2g021330 25.234 321 200 10 648 956 24 316 7.14e-18 87.8
MS.gene27408.t1 MTR_4g117490 25.915 328 191 10 648 957 24 317 8.37e-18 88.2
MS.gene27408.t1 MTR_3g109390 25.714 385 189 16 632 959 55 399 3.22e-17 85.5
MS.gene27408.t1 MTR_8g106960 25.387 323 201 10 646 956 115 409 3.60e-17 86.7
MS.gene27408.t1 MTR_3g089510 26.140 329 191 12 646 956 22 316 3.93e-17 86.7
MS.gene27408.t1 MTR_3g089510 26.140 329 191 12 646 956 10 304 4.87e-17 86.3
MS.gene27408.t1 MTR_4g087620 25.237 317 187 12 655 957 61 341 6.95e-17 84.3
MS.gene27408.t1 MTR_8g106960 26.074 326 195 9 646 956 115 409 7.74e-17 85.5
MS.gene27408.t1 MTR_3g076540 23.706 367 214 10 632 956 77 419 4.47e-16 82.4
MS.gene27408.t1 MTR_5g026960 24.528 318 194 11 648 956 3 283 4.94e-16 82.4
MS.gene27408.t1 MTR_2g072840 25.697 323 200 10 646 956 22 316 1.41e-15 81.6
MS.gene27408.t1 MTR_3g109390 28.509 228 117 6 632 833 55 262 1.59e-15 79.3
MS.gene27408.t1 MTR_3g460950 24.478 335 188 12 645 957 28 319 1.77e-15 79.7
MS.gene27408.t1 MTR_3g060330 24.478 335 188 12 645 957 28 319 1.77e-15 79.7
MS.gene27408.t1 MTR_8g461040 26.006 323 199 10 646 956 23 317 1.83e-15 81.3
MS.gene27408.t1 MTR_3g076540 24.668 377 206 13 632 956 77 427 3.55e-15 79.3
MS.gene27408.t1 MTR_2g072840 25.697 323 200 10 646 956 22 316 4.89e-15 79.3
MS.gene27408.t1 MTR_3g076540 24.791 359 194 12 645 956 8 337 8.72e-15 77.4
MS.gene27408.t1 MTR_3g109390 25.627 359 184 13 650 959 64 388 1.08e-14 77.8
MS.gene27408.t1 MTR_3g109390 25.627 359 184 13 650 959 86 410 1.18e-14 77.8
MS.gene27408.t1 MTR_4g104620 23.546 361 216 10 632 953 81 420 1.43e-14 77.4
MS.gene27408.t1 MTR_4g061320 25.110 227 152 7 739 961 119 331 8.51e-14 74.7
MS.gene27408.t1 MTR_8g028720 23.642 313 198 9 655 957 43 324 1.29e-13 73.9
MS.gene27408.t1 MTR_3g086530 27.004 237 128 7 632 841 74 292 2.26e-13 72.8
MS.gene27408.t1 MTR_3g086530 27.004 237 128 7 632 841 74 292 2.28e-13 73.9
MS.gene27408.t1 MTR_3g076540 24.642 349 187 12 655 956 1 320 2.41e-13 72.8
MS.gene27408.t1 MTR_3g086530 27.004 237 128 7 632 841 74 292 2.62e-13 73.2
MS.gene27408.t1 MTR_4g056390 35.032 157 88 5 647 802 37 180 6.80e-13 72.8
MS.gene27408.t1 MTR_5g024270 31.098 164 99 3 640 802 29 179 9.37e-13 72.0
MS.gene27408.t1 MTR_7g078690 22.741 321 191 10 655 957 44 325 1.20e-12 71.2
MS.gene27408.t1 MTR_1g061690 31.579 171 97 5 637 802 30 185 1.22e-12 72.0
MS.gene27408.t1 MTR_5g010030 23.871 310 201 8 655 957 47 328 1.78e-12 70.5
MS.gene27408.t1 MTR_5g024270 31.098 164 99 3 640 802 29 179 2.77e-12 70.1
MS.gene27408.t1 MTR_7g110060 24.051 316 199 10 649 955 75 358 2.80e-12 70.5
MS.gene27408.t1 MTR_8g432510 22.727 418 256 15 578 965 52 432 4.10e-12 70.1
MS.gene27408.t1 MTR_4g104620 24.047 341 199 10 655 956 1 320 5.96e-12 68.6
MS.gene27408.t1 MTR_4g104620 24.047 341 199 10 655 956 10 329 6.22e-12 68.6
MS.gene27408.t1 MTR_4g061130 25.225 222 133 7 739 956 118 310 9.86e-12 68.2
MS.gene27408.t1 MTR_2g083940 25.309 324 199 13 649 962 88 378 1.63e-11 68.2
MS.gene27408.t1 MTR_1g086370 24.528 318 197 11 649 956 75 359 1.79e-11 67.8
MS.gene27408.t1 MTR_1g084760 23.442 337 207 12 638 956 56 359 2.45e-11 67.4
MS.gene27408.t1 MTR_1g086370 24.528 318 197 11 649 956 42 326 3.02e-11 67.0
MS.gene27408.t1 MTR_2g083940 25.309 324 199 13 649 962 34 324 5.76e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27408.t1 AT1G73450 49.620 1054 361 26 40 965 141 1152 0.0 855
MS.gene27408.t1 AT1G73450 88.235 34 4 0 1 34 1111 1144 2.03e-12 72.0
MS.gene27408.t1 AT1G73460 58.136 590 193 10 408 965 602 1169 0.0 615
MS.gene27408.t1 AT1G73460 48.980 343 124 6 80 382 176 507 3.38e-79 281
MS.gene27408.t1 AT1G73460 88.235 34 4 0 1 34 1128 1161 2.39e-12 72.0
MS.gene27408.t1 AT1G73460 58.136 590 193 10 408 965 602 1169 0.0 615
MS.gene27408.t1 AT1G73460 48.980 343 124 6 80 382 176 507 3.38e-79 281
MS.gene27408.t1 AT1G73460 88.235 34 4 0 1 34 1128 1161 2.39e-12 72.0
MS.gene27408.t1 AT3G17750 61.598 513 163 8 467 965 646 1138 0.0 580
MS.gene27408.t1 AT3G17750 50.158 317 108 5 116 389 208 517 9.93e-73 261
MS.gene27408.t1 AT2G40120 47.447 470 187 11 517 957 126 564 8.14e-127 396
MS.gene27408.t1 AT5G35980 34.426 244 132 6 648 886 121 341 8.03e-31 131
MS.gene27408.t1 AT5G35980 34.426 244 132 6 648 886 86 306 1.21e-30 130
MS.gene27408.t1 AT5G35980 34.426 244 132 6 648 886 121 341 1.25e-30 130
MS.gene27408.t1 AT1G13350 24.432 352 205 10 641 957 461 786 2.13e-21 100
MS.gene27408.t1 AT1G13350 24.432 352 205 10 641 957 434 759 2.21e-21 100
MS.gene27408.t1 AT1G13350 24.432 352 205 10 641 957 507 832 5.23e-21 99.8
MS.gene27408.t1 AT4G03175 44.565 92 40 2 877 957 2 93 2.31e-20 87.4
MS.gene27408.t1 AT3G25840 26.301 346 199 14 644 957 612 933 3.36e-20 97.1
MS.gene27408.t1 AT3G25840 30.918 207 119 6 641 841 347 535 9.64e-20 95.1
MS.gene27408.t1 AT3G53640 25.284 352 202 12 641 957 315 640 7.83e-19 92.4
MS.gene27408.t1 AT5G19010 25.316 316 196 10 648 951 24 311 3.21e-18 90.1
MS.gene27408.t1 AT4G32660 24.324 370 210 10 632 956 44 388 7.91e-18 87.4
MS.gene27408.t1 AT4G32660 24.324 370 210 10 632 956 52 396 8.31e-18 87.4
MS.gene27408.t1 AT3G18040 26.316 323 198 10 646 956 20 314 1.24e-17 87.8
MS.gene27408.t1 AT3G18040 26.316 323 198 10 646 956 15 309 1.51e-17 87.4
MS.gene27408.t1 AT4G32660 29.204 226 118 6 632 833 52 259 1.61e-17 85.9
MS.gene27408.t1 AT3G18040 26.316 323 198 10 646 956 129 423 1.62e-17 87.8
MS.gene27408.t1 AT1G73670 26.364 330 191 10 646 957 87 382 2.03e-17 87.4
MS.gene27408.t1 AT4G24740 24.468 376 204 13 632 957 41 386 2.03e-17 85.9
MS.gene27408.t1 AT4G24740 24.468 376 204 13 632 957 79 424 2.54e-17 86.3
MS.gene27408.t1 AT3G18040 26.316 323 198 10 646 956 129 423 5.55e-17 86.3
MS.gene27408.t1 AT1G18150 25.617 324 201 10 646 957 101 396 1.71e-16 84.7
MS.gene27408.t1 AT1G18150 25.617 324 201 10 646 957 101 396 1.71e-16 84.7
MS.gene27408.t1 AT1G18150 25.617 324 201 10 646 957 101 396 1.71e-16 84.7
MS.gene27408.t1 AT3G53570 22.740 365 225 8 632 957 98 444 6.13e-16 82.0
MS.gene27408.t1 AT3G53570 22.740 365 225 8 632 957 98 444 6.13e-16 82.0
MS.gene27408.t1 AT3G53570 22.740 365 225 8 632 957 98 444 6.13e-16 82.0
MS.gene27408.t1 AT4G24740 27.234 235 128 6 632 841 79 295 6.39e-16 80.9
MS.gene27408.t1 AT4G24740 27.234 235 128 6 632 841 79 295 6.59e-16 80.5
MS.gene27408.t1 AT2G42880 25.387 323 201 10 646 956 22 316 8.99e-16 82.4
MS.gene27408.t1 AT3G53570 22.740 365 225 8 632 957 84 430 9.01e-16 81.6
MS.gene27408.t1 AT3G53570 22.740 365 225 8 632 957 84 430 9.01e-16 81.6
MS.gene27408.t1 AT2G42880 25.387 323 201 10 646 956 22 316 1.06e-15 81.6
MS.gene27408.t1 AT3G14720 25.846 325 197 11 646 956 22 316 1.06e-15 82.0
MS.gene27408.t1 AT2G17530 35.443 158 88 3 646 802 35 179 1.19e-15 80.1
MS.gene27408.t1 AT2G17530 35.443 158 88 3 646 802 35 179 2.14e-15 80.5
MS.gene27408.t1 AT2G17530 35.443 158 88 3 646 802 35 179 2.14e-15 80.5
MS.gene27408.t1 AT1G53510 25.231 325 199 11 646 956 22 316 1.19e-14 79.0
MS.gene27408.t1 AT3G14720 24.773 331 193 10 646 956 22 316 1.31e-14 77.8
MS.gene27408.t1 AT3G14720 24.773 331 193 10 646 956 22 316 1.31e-14 77.8
MS.gene27408.t1 AT4G24740 24.217 351 188 12 655 957 1 321 1.53e-14 76.3
MS.gene27408.t1 AT4G24740 24.217 351 188 12 655 957 1 321 1.53e-14 76.3
MS.gene27408.t1 AT4G24740 24.217 351 188 12 655 957 1 321 1.53e-14 76.3
MS.gene27408.t1 AT4G11330 23.871 310 201 9 655 957 49 330 3.43e-14 75.9
MS.gene27408.t1 AT3G59790 25.697 323 178 13 655 957 66 346 3.43e-14 76.3
MS.gene27408.t1 AT4G01370 24.281 313 196 9 655 957 49 330 3.49e-14 75.9
MS.gene27408.t1 AT4G00720 24.702 336 201 12 640 956 120 422 7.04e-14 75.9
MS.gene27408.t1 AT4G13020 25.079 315 207 10 648 957 3 293 1.10e-13 75.1
MS.gene27408.t1 AT4G13020 25.079 315 207 10 648 957 3 293 1.39e-13 74.3
MS.gene27408.t1 AT1G07880 24.281 313 208 11 653 961 37 324 1.41e-13 73.9
MS.gene27408.t1 AT4G24740 27.723 202 105 5 655 833 1 184 4.04e-13 70.9
MS.gene27408.t1 AT2G43790 23.839 323 184 12 655 957 69 349 6.63e-13 72.0
MS.gene27408.t1 AT5G45430 24.762 315 197 13 648 956 3 283 1.63e-12 71.6
MS.gene27408.t1 AT5G45430 24.762 315 197 13 648 956 3 283 1.94e-12 71.2
MS.gene27408.t1 AT3G45640 23.438 320 200 11 655 962 44 330 2.44e-12 70.1
MS.gene27408.t1 AT3G53030 28.994 169 104 4 637 802 28 183 3.55e-12 70.5
MS.gene27408.t1 AT3G18040 27.155 232 140 7 737 956 12 226 4.24e-12 69.7
MS.gene27408.t1 AT3G44850 29.936 157 96 3 647 802 43 186 4.58e-12 70.1
MS.gene27408.t1 AT3G61160 24.768 323 190 12 649 956 109 393 4.58e-12 69.7
MS.gene27408.t1 AT1G01560 24.691 324 199 11 655 964 46 338 5.32e-12 69.3
MS.gene27408.t1 AT4G18710 24.561 342 206 14 640 962 22 330 5.42e-12 69.3
MS.gene27408.t1 AT3G61160 24.768 323 190 12 649 956 102 386 7.74e-12 68.9
MS.gene27408.t1 AT5G14640 24.528 318 197 12 649 956 74 358 9.51e-12 68.6
MS.gene27408.t1 AT5G14640 24.528 318 197 12 649 956 74 358 9.51e-12 68.6
MS.gene27408.t1 AT3G61160 24.768 323 190 12 649 956 102 386 1.07e-11 68.6
MS.gene27408.t1 AT5G22840 30.573 157 95 3 647 802 43 186 1.23e-11 68.9
MS.gene27408.t1 AT1G06390 23.188 345 207 13 640 962 52 360 1.76e-11 67.8
MS.gene27408.t1 AT1G06390 23.188 345 207 13 640 962 52 360 1.76e-11 67.8
MS.gene27408.t1 AT2G46070 23.323 313 199 9 655 957 81 362 2.53e-11 67.4
MS.gene27408.t1 AT2G46070 23.323 313 199 9 655 957 47 328 2.73e-11 67.0
MS.gene27408.t1 AT4G19110 25.410 244 160 10 718 956 1 227 3.42e-11 67.0
MS.gene27408.t1 AT5G26751 23.304 339 205 13 638 956 50 353 3.75e-11 66.6
MS.gene27408.t1 AT1G10210 24.364 275 168 9 707 962 72 325 5.81e-11 65.9
MS.gene27408.t1 AT1G10210 24.364 275 168 9 707 962 72 325 5.81e-11 65.9
MS.gene27408.t1 AT1G10210 24.364 275 168 9 707 962 72 325 5.81e-11 65.9

Find 208 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGACAGCTCTTTACTTAT+TGG 0.146422 6.4:-50051699 MS.gene27408:CDS
TTGATTATCCAAATGAATAT+TGG 0.229575 6.4:-50050301 MS.gene27408:CDS
CAAATTCATCTTCTGATGTT+TGG 0.231968 6.4:-50052032 MS.gene27408:CDS
TTTACTTATTGGATCATATC+TGG 0.234260 6.4:-50051688 MS.gene27408:CDS
CTTGAAGCCGGAGAATATTT+TGG 0.237591 6.4:-50046287 MS.gene27408:CDS
CTATCATGTCACCGAGTATC+TGG 0.243442 6.4:-50047581 MS.gene27408:CDS
ATTTAACCATGGCGACTTAC+TGG 0.244009 6.4:+50049494 None:intergenic
TCAAGATAGCCAGATGATTC+AGG 0.256474 6.4:-50049526 MS.gene27408:CDS
TCAGAGGTGTGTTTGATTAA+TGG 0.256565 6.4:-50052375 MS.gene27408:CDS
ATAAGCCGTTGACTATTAAT+TGG 0.257446 6.4:-50051767 MS.gene27408:CDS
CCTTCCTTCCACCGTCAATT+TGG 0.260510 6.4:+50052337 None:intergenic
CATTTACTTGCTAGGGTAAT+CGG 0.262796 6.4:-50045159 MS.gene27408:CDS
TCTGAAGAAAACAGTCTTGA+TGG 0.263411 6.4:+50051999 None:intergenic
TGCCTCAAAGATGTCTTCTT+TGG 0.272217 6.4:+50044567 None:intergenic
CATAAATTCAACAGAGAATC+AGG 0.285719 6.4:-50046864 MS.gene27408:CDS
GTCAATTACCATTCAATGTT+TGG 0.292705 6.4:-50046353 MS.gene27408:CDS
GATGCAGAAGGTCGCTTCTT+CGG 0.294316 6.4:+50044483 None:intergenic
GATGCAGAAGGTCGCTTCTT+CGG 0.294316 6.4:+50053127 None:intergenic
CTTCACCCGAGAAAAGTTCT+AGG 0.316441 6.4:-50049380 MS.gene27408:CDS
TGATTTCAGTAAGAATTCTA+TGG 0.330123 6.4:-50049679 MS.gene27408:CDS
ATGCAGAAGGTCGCTTCTTC+GGG 0.331076 6.4:+50044484 None:intergenic
ATGCAGAAGGTCGCTTCTTC+GGG 0.331076 6.4:+50053128 None:intergenic
TGATTATCCAAATGAATATT+GGG 0.333788 6.4:-50050300 MS.gene27408:CDS
GACAGTGATGCTGCCGATAT+TGG 0.336671 6.4:-50049835 MS.gene27408:CDS
TTGATCGTCATCCTCCTCTT+TGG 0.346868 6.4:+50050121 None:intergenic
GTGCACAATCTTTAGATTGA+AGG 0.352847 6.4:+50049137 None:intergenic
AAGATGTCTTCTTTGGAATC+AGG 0.354438 6.4:+50044574 None:intergenic
CTTCACAATGCCAAGGTTGC+AGG 0.354539 6.4:-50046829 MS.gene27408:intron
CCAACTACTGTCGATAATTA+CGG 0.356947 6.4:-50049315 MS.gene27408:CDS
TCAATTTGGTAAGGCTTTGC+AGG 0.357463 6.4:+50052351 None:intergenic
GAAGAGGATTCTTATTTCTC+TGG 0.365779 6.4:-50050089 MS.gene27408:CDS
TCAGAGTCCCAATATTCATT+TGG 0.374608 6.4:+50050293 None:intergenic
TCTTTCTGTTGTTGCACTGC+AGG 0.376816 6.4:-50046937 MS.gene27408:CDS
GAAATCATAATGAGAGTGTT+TGG 0.377199 6.4:+50049695 None:intergenic
TTGTGCAAAACAAAGAATCT+AGG 0.379120 6.4:-50052143 MS.gene27408:CDS
TAAATGTTGCCCGGGAATCA+TGG 0.379625 6.4:+50045176 None:intergenic
ATTACAAGGGAAGATGAATT+AGG 0.381616 6.4:-50049240 MS.gene27408:CDS
TCATATCTGGATGTACCTAT+TGG 0.385509 6.4:-50051675 MS.gene27408:CDS
AAAATGATTCCCATGATTCC+CGG 0.392122 6.4:-50045186 MS.gene27408:CDS
GAAGATCACGCTCGAGGAAA+TGG 0.393141 6.4:-50049867 MS.gene27408:CDS
TCGGCTCCTGAGGTTATTCT+CGG 0.401503 6.4:-50046167 MS.gene27408:CDS
GGACCTCTTTCCTGAGGATC+TGG 0.410492 6.4:+50050146 None:intergenic
ATGACGACGACGACGATGTT+GGG 0.411245 6.4:-50050265 MS.gene27408:CDS
ATGCACTTCACTGCCAATAT+CGG 0.416127 6.4:+50049822 None:intergenic
ATCTGGAACGCTTCCATGCC+CGG 0.417630 6.4:+50050163 None:intergenic
CCGGGCAACATTTACTTGCT+AGG 0.420388 6.4:-50045167 MS.gene27408:CDS
CTGGTCCCTTTGATGCATCT+TGG 0.432370 6.4:-50046117 MS.gene27408:CDS
TACATTGTTGGCTGCGTCAA+AGG 0.435198 6.4:+50052257 None:intergenic
AGAGCAGGTAAGGCAAATAA+AGG 0.436416 6.4:-50049181 MS.gene27408:CDS
CAACTACTGTCGATAATTAC+GGG 0.437581 6.4:-50049314 MS.gene27408:CDS
TTTATGAAACTCGTATAAGT+TGG 0.441775 6.4:+50046881 None:intergenic
CTTCAGTATTTACATAACCT+TGG 0.444556 6.4:-50046325 MS.gene27408:CDS
TACCCTAGTGACAATGAAAA+GGG 0.444820 6.4:-50050188 MS.gene27408:CDS
AGAGCATGTCAAGCTAGAAA+TGG 0.445560 6.4:-50049280 MS.gene27408:CDS
ACTCCACAAACCTGCAACCT+TGG 0.445960 6.4:+50046819 None:intergenic
TATGTCGAAAAGCGTGATCC+TGG 0.446339 6.4:-50047430 MS.gene27408:CDS
CATGATTGTGAAAGTGGACT+TGG 0.447340 6.4:-50049723 MS.gene27408:CDS
ATTTACTTGCTAGGGTAATC+GGG 0.449771 6.4:-50045158 MS.gene27408:CDS
CAAGTCCACTTTCACAATCA+TGG 0.454908 6.4:+50049724 None:intergenic
GTTGTTCAGAACTGGCTTTG+AGG 0.456121 6.4:-50047650 MS.gene27408:intron
AGCGAGAAGTTTGAATCTGA+TGG 0.456420 6.4:-50051744 MS.gene27408:CDS
CTTCCACCGTCAATTTGGTA+AGG 0.458307 6.4:+50052342 None:intergenic
CGATCAATCTTTCGCTGAAG+AGG 0.462595 6.4:-50050105 MS.gene27408:CDS
TTGATATGCAGGAAAGCAAC+AGG 0.462723 6.4:-50044605 MS.gene27408:intron
ATGCAGGTCATGAGCTTGTA+TGG 0.463457 6.4:+50047537 None:intergenic
AGAATACTTCAAGATGATAT+CGG 0.464704 6.4:+50044420 None:intergenic
ATGACAAGAAGATTGATATC+TGG 0.466209 6.4:-50046136 MS.gene27408:CDS
AAAGAGCAGGTGGATGAAGT+GGG 0.466670 6.4:-50051924 MS.gene27408:intron
TTAGGTATGAGGAAGGCTAC+AGG 0.471617 6.4:-50050419 MS.gene27408:intron
TCGTCATCCTCCTCTTTGGC+AGG 0.473408 6.4:+50050125 None:intergenic
GAATTCCATGATTGTGAAAG+TGG 0.475072 6.4:-50049729 MS.gene27408:CDS
CGGGCAACATTTACTTGCTA+GGG 0.475106 6.4:-50045166 MS.gene27408:CDS
GAAGTTTGAATCTGATGGAT+TGG 0.475357 6.4:-50051739 MS.gene27408:CDS
CAAGATGATATCGGTTCGTA+AGG 0.480516 6.4:+50044429 None:intergenic
CTTCTGTGCAAGAGCAGGTA+AGG 0.480601 6.4:-50049191 MS.gene27408:CDS
TATGACGACGACGACGATGT+TGG 0.483600 6.4:-50050266 MS.gene27408:CDS
AATGAAAAGGGGACCGGGCA+TGG 0.484331 6.4:-50050176 MS.gene27408:CDS
CCCTTGTGGCTTGGAAGTAG+TGG 0.490759 6.4:-50052195 MS.gene27408:CDS
TTACCCTAGTGACAATGAAA+AGG 0.491800 6.4:-50050189 MS.gene27408:CDS
CCTCAGGAGCCGATAGGACC+TGG 0.492819 6.4:+50046177 None:intergenic
AAAAGAGCAGGTGGATGAAG+TGG 0.493164 6.4:-50051925 MS.gene27408:intron
GGTAAGGCAAATAAAGGCTC+AGG 0.493775 6.4:-50049175 MS.gene27408:CDS
AACCAGGCCTCATCCTCAAT+AGG 0.494298 6.4:+50050230 None:intergenic
TATGCTTTATGAGAGGAATC+AGG 0.494533 6.4:-50045097 MS.gene27408:intron
AACCACCACCCTGAATCATC+TGG 0.494607 6.4:+50049517 None:intergenic
TTCCAAAGAAGACATCTTTG+AGG 0.495846 6.4:-50044569 MS.gene27408:CDS
AAGTGCTTCCAAACATTGAA+TGG 0.497818 6.4:+50046345 None:intergenic
ATGAAGAAGTTGACATTACA+AGG 0.499940 6.4:-50049254 MS.gene27408:CDS
TTTCGATTGCTGAGATATTG+AGG 0.500701 6.4:+50052296 None:intergenic
TTCGTCACTTAAAGAGAACT+TGG 0.500910 6.4:-50052088 MS.gene27408:CDS
GCAAATAAAGGCTCAGGAGG+AGG 0.504551 6.4:-50049169 MS.gene27408:CDS
TGATGGATTGGCTACTAAGC+TGG 0.505269 6.4:-50051727 MS.gene27408:CDS
CAAGATAGCCAGATGATTCA+GGG 0.506977 6.4:-50049525 MS.gene27408:CDS
CTGAAGCTCTAAAGCACCCC+TGG 0.508338 6.4:-50044461 MS.gene27408:CDS
CTGAAGCTCTAAAGCACCCC+TGG 0.508338 6.4:-50053105 MS.gene27408:intron
AAGAATCTAGGGAAATTGAT+CGG 0.510131 6.4:-50052131 MS.gene27408:CDS
CTGATGAAATGCTTTCTTCG+TGG 0.513180 6.4:-50049422 MS.gene27408:CDS
CAACGAAGTCAATGAAGCCT+TGG 0.513679 6.4:+50053170 None:intergenic
AAATGTTGCCCGGGAATCAT+GGG 0.513841 6.4:+50045177 None:intergenic
GATTGCTTCTGTGCAAGAGC+AGG 0.514712 6.4:-50049196 MS.gene27408:CDS
AGAATCTAGGGAAATTGATC+GGG 0.514847 6.4:-50052130 MS.gene27408:CDS
CAACGAAGTCAATGAAGCCT+TGG 0.515006 6.4:+50044526 None:intergenic
CCTAGCAAGTAAATGTTGCC+CGG 0.516046 6.4:+50045167 None:intergenic
TGGAAGCGTTCCAGATCCTC+AGG 0.518189 6.4:-50050156 MS.gene27408:CDS
AAAAGCATTCATACAGTCAT+CGG 0.521280 6.4:+50049452 None:intergenic
GAGGTGAAGGTCATTGATCT+TGG 0.522315 6.4:-50046244 MS.gene27408:CDS
TGAGGAGTTTGATCTCATCA+AGG 0.522969 6.4:+50047455 None:intergenic
TTCGTAAGGGTATGATAACC+AGG 0.523874 6.4:+50044443 None:intergenic
TTCTGCCAAGATGCATCAAA+GGG 0.525805 6.4:+50046112 None:intergenic
TGGCTATCTTGAAGAGATTG+AGG 0.526968 6.4:+50049537 None:intergenic
GTTCTGAACAGAATAACATC+GGG 0.530083 6.4:-50051869 MS.gene27408:CDS
CCGTAATTATCGACAGTAGT+TGG 0.530936 6.4:+50049315 None:intergenic
ATGTTCAATCCAGGTCCTAT+CGG 0.531760 6.4:-50046186 MS.gene27408:CDS
TTTGCTCATATGTTCAATCC+AGG 0.532216 6.4:-50046195 MS.gene27408:CDS
AGCAGAAGGAAGAGTATCCA+TGG 0.533713 6.4:-50051818 MS.gene27408:CDS
AAATGATTCCCATGATTCCC+GGG 0.534401 6.4:-50045185 MS.gene27408:CDS
ATCTTGGCAGAACTTTGTAC+TGG 0.534669 6.4:-50046101 MS.gene27408:CDS
TTCTGCTTCTCCAATGCAAG+CGG 0.537774 6.4:+50051834 None:intergenic
CCAAATTGACGGTGGAAGGA+AGG 0.539166 6.4:-50052337 MS.gene27408:CDS
GCAAAGCCTTACCAAATTGA+CGG 0.540658 6.4:-50052348 MS.gene27408:CDS
GTTCTGCCAAGATGCATCAA+AGG 0.541583 6.4:+50046111 None:intergenic
CAAGCTCATGACCTGCATAC+AGG 0.543444 6.4:-50047532 MS.gene27408:CDS
TTGGCAGGACCTCTTTCCTG+AGG 0.546000 6.4:+50050140 None:intergenic
GAAGGCTAGTAATACTTCAA+AGG 0.546159 6.4:-50052319 MS.gene27408:CDS
TATCATGTCACCGAGTATCT+GGG 0.549601 6.4:-50047580 MS.gene27408:CDS
CTTACCAAATTGACGGTGGA+AGG 0.550232 6.4:-50052341 MS.gene27408:CDS
GGAAAACTTCTGAATCATAG+TGG 0.550874 6.4:-50049889 MS.gene27408:CDS
TCGAATAAATATGTCATTGG+AGG 0.552330 6.4:-50049615 MS.gene27408:CDS
TTCACCCGAGAAAAGTTCTA+GGG 0.553463 6.4:-50049379 MS.gene27408:CDS
AGTGACAATGAAAAGGGGAC+CGG 0.556126 6.4:-50050182 MS.gene27408:CDS
GAGTCGAATAAATATGTCAT+TGG 0.556213 6.4:-50049618 MS.gene27408:CDS
TGCAGCAGAACCCAGATACT+CGG 0.556358 6.4:+50047570 None:intergenic
CGGCTCCTGAGGTTATTCTC+GGG 0.557658 6.4:-50046166 MS.gene27408:CDS
AGCCAGATGATTCAGGGTGG+TGG 0.560576 6.4:-50049519 MS.gene27408:CDS
AAAATGTGATACTTGTCTCC+AGG 0.560708 6.4:+50047412 None:intergenic
CCAGGTCCTATCGGCTCCTG+AGG 0.561518 6.4:-50046177 MS.gene27408:CDS
ATGATTGTGAAAGTGGACTT+GGG 0.561782 6.4:-50049722 MS.gene27408:CDS
GCTAATCTTTGGTTCTGTAG+AGG 0.562001 6.4:+50052167 None:intergenic
AATACATTGCGACTTGAAGC+CGG 0.562519 6.4:-50046299 MS.gene27408:CDS
GAGACAACCTATTGAGGATG+AGG 0.563826 6.4:-50050237 MS.gene27408:CDS
AAACATCCACACCTGTATGC+AGG 0.563940 6.4:+50047521 None:intergenic
TGTGCAAAACAAAGAATCTA+GGG 0.565832 6.4:-50052142 MS.gene27408:CDS
TTTGAGGCACAGATTACCGA+TGG 0.566878 6.4:-50044553 MS.gene27408:CDS
ACCACTACTTCCAAGCCACA+AGG 0.566949 6.4:+50052194 None:intergenic
AGTCGCAATGTATTAGTCCA+AGG 0.567368 6.4:+50046308 None:intergenic
TCGCTCCAATTAATAGTCAA+CGG 0.569420 6.4:+50051762 None:intergenic
AACCTATTGAGGATGAGGCC+TGG 0.570582 6.4:-50050232 MS.gene27408:CDS
TAGGTATGAGGAAGGCTACA+GGG 0.571899 6.4:-50050418 MS.gene27408:CDS
CTTCGTTGCTAATTTGCTCG+AGG 0.575791 6.4:-50044511 MS.gene27408:CDS
GCTAGGGTAATCGGGATCAT+CGG 0.577471 6.4:-50045150 MS.gene27408:CDS
CTTCGTTGCTCATTTGCTCG+AGG 0.578087 6.4:-50053155 MS.gene27408:CDS
TGAATTAGGTGTTTCACAAG+AGG 0.578790 6.4:-50049226 MS.gene27408:CDS
GCATTACAATTATTTAACCA+TGG 0.583609 6.4:+50049483 None:intergenic
AAGAGCAGGTGGATGAAGTG+GGG 0.585593 6.4:-50051923 MS.gene27408:intron
GTTCCAGATCCTCAGGAAAG+AGG 0.586649 6.4:-50050149 MS.gene27408:CDS
GGAAAGAGGTCCTGCCAAAG+AGG 0.586977 6.4:-50050135 MS.gene27408:CDS
CTAGCAAGTAAATGTTGCCC+GGG 0.587648 6.4:+50045168 None:intergenic
GTTCAGAACTGGCTTTGAGG+AGG 0.600690 6.4:-50047647 MS.gene27408:intron
GTGACAATGAAAAGGGGACC+GGG 0.600870 6.4:-50050181 MS.gene27408:CDS
TCAATCTAAAGATTGTGCAC+AGG 0.604639 6.4:-50049134 MS.gene27408:CDS
GCTTGCATTGGAGAAGCAGA+AGG 0.605553 6.4:-50051832 MS.gene27408:CDS
TTGAGGCACAGATTACCGAT+GGG 0.608031 6.4:-50044552 MS.gene27408:CDS
AAGAGGTCCTGCCAAAGAGG+AGG 0.616143 6.4:-50050132 MS.gene27408:CDS
AAGGCAAATAAAGGCTCAGG+AGG 0.617382 6.4:-50049172 MS.gene27408:CDS
AGGTATGAGGAAGGCTACAG+GGG 0.617750 6.4:-50050417 MS.gene27408:CDS
GTGGTTCCAGTAAGTCGCCA+TGG 0.618707 6.4:-50049500 MS.gene27408:CDS
CTACAGCCGATGTGAGGTGA+AGG 0.619012 6.4:-50046257 MS.gene27408:CDS
AGTTGGCTGTCTGTTAGTCA+AGG 0.620743 6.4:-50050392 MS.gene27408:CDS
AAAATCATATGCTTTATGAG+AGG 0.623112 6.4:-50045104 MS.gene27408:CDS
AAAATCTGATACAAGATCAG+AGG 0.624467 6.4:+50050355 None:intergenic
GAATAACCTCAGGAGCCGAT+AGG 0.626479 6.4:+50046171 None:intergenic
AGTTCTGAACAGAATAACAT+CGG 0.628340 6.4:-50051870 MS.gene27408:CDS
AATTCAACAGAGAATCAGGA+GGG 0.629021 6.4:-50046860 MS.gene27408:CDS
ATGAAATGCTTTCTTCGTGG+AGG 0.631843 6.4:-50049419 MS.gene27408:CDS
GAAAGCCCGAGAATAACCTC+AGG 0.637971 6.4:+50046161 None:intergenic
GTACATGAGACAACCTATTG+AGG 0.638206 6.4:-50050243 MS.gene27408:CDS
TTTAGAGCTTCAGATGCAGA+AGG 0.638379 6.4:+50044471 None:intergenic
TTTAGAGCTTCAGATGCAGA+AGG 0.638379 6.4:+50053115 None:intergenic
TGGATTGAACATATGAGCAA+AGG 0.640056 6.4:+50046197 None:intergenic
GGATGAGAATAATGCTCATG+CGG 0.644136 6.4:-50049358 MS.gene27408:CDS
TAAAAGCTACAGCCGATGTG+AGG 0.648020 6.4:-50046263 MS.gene27408:CDS
AAGTGTACTTCACAATGCCA+AGG 0.649789 6.4:-50046836 MS.gene27408:CDS
TGATTGTGAAAGTGGACTTG+GGG 0.652539 6.4:-50049721 MS.gene27408:CDS
AAGATGATATCGGTTCGTAA+GGG 0.655236 6.4:+50044430 None:intergenic
ACAGCGTCAGACGATCCTAT+CGG 0.655788 6.4:-50050038 MS.gene27408:intron
ATGGTTAAATAATTGTAATG+CGG 0.657060 6.4:-50049481 MS.gene27408:CDS
TTACAGAATTTAAAACAACA+TGG 0.659407 6.4:+50047614 None:intergenic
TCGTAAGGGTATGATAACCA+GGG 0.667962 6.4:+50044444 None:intergenic
TGAGGCACAGATTACCGATG+GGG 0.672618 6.4:-50044551 MS.gene27408:CDS
GATACTCGGTGACATGATAG+CGG 0.673261 6.4:+50047584 None:intergenic
TGTTAGTCAAGGAATATCAG+AGG 0.674279 6.4:-50050381 MS.gene27408:CDS
ATTCAACAGAGAATCAGGAG+GGG 0.674312 6.4:-50046859 MS.gene27408:CDS
TAAAATTATAAAGAACAACA+AGG 0.674441 6.4:-50047494 MS.gene27408:CDS
CCACTACTTCCAAGCCACAA+GGG 0.679882 6.4:+50052195 None:intergenic
AAATTCAACAGAGAATCAGG+AGG 0.684821 6.4:-50046861 MS.gene27408:CDS
CGTAAGGGTATGATAACCAG+GGG 0.686121 6.4:+50044445 None:intergenic
CAATGACCTTCACCTCACAT+CGG 0.686191 6.4:+50046251 None:intergenic
ACCCTAGTGACAATGAAAAG+GGG 0.691112 6.4:-50050187 MS.gene27408:CDS
ATAGTGGAAGATCACGCTCG+AGG 0.693266 6.4:-50049873 MS.gene27408:CDS
AAGCCTTACCAAATTGACGG+TGG 0.695852 6.4:-50052345 MS.gene27408:CDS
GATTGTGAAAGTGGACTTGG+GGG 0.700864 6.4:-50049720 MS.gene27408:CDS
TTCTGAACAGAATAACATCG+GGG 0.704854 6.4:-50051868 MS.gene27408:CDS
TCTGAACAGAATAACATCGG+GGG 0.706118 6.4:-50051867 MS.gene27408:CDS
TGAAGAAGTTGACATTACAA+GGG 0.707878 6.4:-50049253 MS.gene27408:CDS
GGTATGAGGAAGGCTACAGG+GGG 0.710161 6.4:-50050416 MS.gene27408:CDS
GAGGCACAGATTACCGATGG+GGG 0.730280 6.4:-50044550 MS.gene27408:CDS
TCATGACCTGCATACAGGTG+TGG 0.733624 6.4:-50047527 MS.gene27408:CDS
GATAGCCAGATGATTCAGGG+TGG 0.778676 6.4:-50049522 MS.gene27408:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.4 gene 50044428 50053200 50044428 ID=MS.gene27408
chr6.4 mRNA 50044428 50053200 50044428 ID=MS.gene27408.t1;Parent=MS.gene27408
chr6.4 exon 50053106 50053200 50053106 ID=MS.gene27408.t1.exon1;Parent=MS.gene27408.t1
chr6.4 CDS 50053106 50053200 50053106 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50052011 50052401 50052011 ID=MS.gene27408.t1.exon2;Parent=MS.gene27408.t1
chr6.4 CDS 50052011 50052401 50052011 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50051655 50051937 50051655 ID=MS.gene27408.t1.exon3;Parent=MS.gene27408.t1
chr6.4 CDS 50051655 50051937 50051655 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50050039 50050437 50050039 ID=MS.gene27408.t1.exon4;Parent=MS.gene27408.t1
chr6.4 CDS 50050039 50050437 50050039 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50049828 50049913 50049828 ID=MS.gene27408.t1.exon5;Parent=MS.gene27408.t1
chr6.4 CDS 50049828 50049913 50049828 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50049126 50049754 50049126 ID=MS.gene27408.t1.exon6;Parent=MS.gene27408.t1
chr6.4 CDS 50049126 50049754 50049126 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50047409 50047663 50047409 ID=MS.gene27408.t1.exon7;Parent=MS.gene27408.t1
chr6.4 CDS 50047409 50047663 50047409 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50046830 50047001 50046830 ID=MS.gene27408.t1.exon8;Parent=MS.gene27408.t1
chr6.4 CDS 50046830 50047001 50046830 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50046097 50046374 50046097 ID=MS.gene27408.t1.exon9;Parent=MS.gene27408.t1
chr6.4 CDS 50046097 50046374 50046097 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50045098 50045218 50045098 ID=MS.gene27408.t1.exon10;Parent=MS.gene27408.t1
chr6.4 CDS 50045098 50045218 50045098 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
chr6.4 exon 50044428 50044616 50044428 ID=MS.gene27408.t1.exon11;Parent=MS.gene27408.t1
chr6.4 CDS 50044428 50044616 50044428 ID=cds.MS.gene27408.t1;Parent=MS.gene27408.t1
Gene Sequence

>MS.gene27408

ATGGGGGACCAAGGCTTCATTGACTTCGTTGCTCATTTGCTCGAGGTTAACCCGAAGAAGCGACCTTCTGCATCTGAAGCTCTAAAGCACCCCTGGTTATCATACCCTTACGAACTGATATCATCTTGAAGTATTCATCGGTTTTTTCACACTTGGTGATAATGGAAATATCACCCTAAGTTGATTAATTAAATCATTGAAAGGGAAAGGCACTACCTTTGCATCCATGCTGCTTTTCATTATCAAAATTTTAAAGATGATATGGAAAGAGTTGTGCACTTTCACATTCCTGCATAATGCATTCAGAGGCTTAGGATTTTTCATGTCAAAATACGAACTGGGATTCTCCCGTATGATTTATCTTTTACTGAAAGTTAGTAATCACTTGATTATGGTTAAAATCATAAGCTTCCGCTAGTAAGAGTTATTCGTTTCGAACAATCATTTATCAATATAATGAAAAGTAGATATTTTCCCCTGTAATGATGGTTTGCTTTTATAAACATGCCTTCATATGACCCTATTAAGTTCCCTTTTTCTTGGGGATTATTTTTCGCTGGCTTCCTCTGTTTTTTAATTTTCCTGTTTTTTTTTTCGGTAAAGAATTTTCCTGTGTTTATTGTAATTCAATTTTCCATAGATATATAGATATTTTTTTAATTTTATTTTACATGTCATGTTTTTATAAATTATTTAATTGCAAAATAATAAATGGTAACATGTCTTCCACACAAGCATAGTGTTCATGCCATGTCATAAAAATTGAGAGTCAAATTGGAACAAATTTCACCTTTTCTAGGAGTTCAGAGGTGTGTTTGATTAATGGTCCTGCAAAGCCTTACCAAATTGACGGTGGAAGGAAGGCTAGTAATACTTCAAAGGCCTCAATATCTCAGCAATCGAAAACTCAAATGAGTGAAGCCTTTGACGCAGCCAACAATGTAAAAACTGCAGAGGAAAATAACGTTCCCGATGAAAAAAAACCCTTGTGGCTTGGAAGTAGTGGTAAAGCCTCTACAGAACCAAAGATTAGCCTTGTGCAAAACAAAGAATCTAGGGAAATTGATCGGGAGCAGCTTAAATTTAGTAGTTCGTCACTTAAAGAGAACTTGGCTGATAACGTCTTGTCAAGAACTGATGAGAATGCAAATTCATCTTCTGATGTTTGGAAAGATTGTTCCATCAAGACTGTTTTCTTCAGAAAAAGTAGACGAAAAGAGAAAGCTAGAAATTGGTGGTGCAAGGGCTTATATAAAAGAGCAGGTGGATGAAGTGGGGAGAGCTTTTTACTTGGGGAAGTTGCAAGGAAGTTCTGAACAGAATAACATCGGGGGATTAAGTTTTCCGCTTGCATTGGAGAAGCAGAAGGAAGAGTATCCATGGCTTCCTCCTGTGAAAATTAAGTCAGAAGATAAGCCGTTGACTATTAATTGGAGCGAGAAGTTTGAATCTGATGGATTGGCTACTAAGCTGGCAAGTGCTGACAGCTCTTTACTTATTGGATCATATCTGGATGTACCTATTGGACAAGAAATTAAAAATGCAGGTAAGTCCATGATATTATTAAATTATTAAAATACATGCATATGCTTTCAAATGTTCTTGTAGCTGTTTAACCTTTGGGGGCTCTAATTACTGTCTGATTTGTTGGTTTGCCATGACAATAGTTTTGTGTGCTCAGTGCAATTTCCCTCTTTCTGGGCTTATTATTTTGATTTAGTGGATTAAGAATTAATAATCGTAGTGTTTTTTATGGTCTTTACCCTCAAGAAAATCCCCCTCCCCTCCCCTCCCCTCCAAGGATTGTTCCAGCCAGGATTCAAATTTGGGTTCTCCCGTACGATTCATCCTTAAGTGGAGCTCATTAATCACTTGGTTAATAATGTGTTCCTTTGTACACTAAGAGTGTGTTTGCGAGTTGGATTTTGGAGGGTTATGGAGGGGAAGGCTTTAAAGGGTTCACTCTATATTTTAATATATATTTGATATTTTAAAAAAATTGAAAGAACAACATGATACATGAGCATATGTTATCATGTTGTTCTTTAATTTTTAAAAAAAATACCAAACACACACACACACACACACACACACACACACAATTAGCCCTTCAAAGCCCTCCCCTCCAAAAACCAACTCCGATACACACTTAGCTTCTTTCTGGTATGCATGGCAATTTGAAATACACATACACTTTGATGCCAATTGGATTGAATTTTGACATTGCGAGATAAAATAGTATTCCACTTACTAGCCTTAGCACCTGAATCTCTTTCATCTTGTTGGCCTACTTCTTGTCAGCTCTGTTGTCAATAGCAGCCGCGCCACCCGCTATAGCGGAGCGTAGGAATGGTGAAATTTACGGTGGGTAAAATGGCTATAATAATTTTGTAGACTTCACTAAAATGGGAGATTTGTCCTACTTACTTTGTAAATTTATCATGAATGCTAATGTGATTACTTTTCAATGATATTTTGTATGTGAATAGATATTAGTTTGCTTAATGTCACATTATTTATTGAATCAAAATGATTTAAATATTAGTTAGTTCCCCTCTGTGCTAATCCCAGTGGACCATGAAAATCAAAGCTACCAATTAGGTAAATGCTTTTGTTTGGCCTGTTTTACCGATTAAGGTTTTCCCACATTAACTATTCTCAGCCATTTGTACATACCCAAAGATTATTTGTGATTGTTTTTTTTCTGTTTGTGCATGCTTTCTTACAAAGACCATGACTTTGACCTATTTGTATATGTTTTAGGTATGAGGAAGGCTACAGGGGGCAGTTGGCTGTCTGTTAGTCAAGGAATATCAGAGGATACCTCTGATCTTGTATCAGATTTTGCTACAGTTGGTGATGGGTTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGACGACGACGACGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCACGAAATTGATTACCCTAGTGACAATGAAAAGGGGACCGGGCATGGAAGCGTTCCAGATCCTCAGGAAAGAGGTCCTGCCAAAGAGGAGGATGACGATCAATCTTTCGCTGAAGAGGATTCTTATTTCTCTGGAGAGCAATATATTCAAGCAAAGAATGTCACAGCGTCAGACGATCCTATCGGTATAACGATTTAATGGCTCAATATGATGGGAAATTAATGGTTGCAGAATAAAGGAATCTGATGCTTGTGGAACCTGTCTGGCAGGGATTTGTCCCTCAGTCAAATGACCTGATCATGTAGGGAGATGGAAAACTTCTGAATCATAGTGGAAGATCACGCTCGAGGAAATGGATGATGATCGACAGTGATGCTGCCGATATTGGCAGTGAAGTGCATGGAACTTTTATTGGTGGTAGTAGTGAAGGGGATTTAGGGGATCCAAGCACTCTCATTATGACTTGAGTATGAATTCCATGATTGTGAAAGTGGACTTGGGGGATCCAAACACTCTCATTATGATTTCAGTAAGAATTCTATGGAAAAATCATTTAAAAATAAGAAGAAAAATGATGAGATTGAGTCGAATAAATATGTCATTGGAGGTCATAAAGATGCACACTCACAAATAAAAACACATACTGAAGGCAACTTTTCATTTCCTCAATCTCTTCAAGATAGCCAGATGATTCAGGGTGGTGGTTCCAGTAAGTCGCCATGGTTAAATAATTGTAATGCGGATGAAACCGATGACTGTATGAATGCTTTTGAGGGATCTGATGAAATGCTTTCTTCGTGGAGGCAGAAGAGTAGTGATTCTTCACCCGAGAAAAGTTCTAGGGATGAGAATAATGCTCATGCGGTTAGATCTTCAAATTCTTCTCCAACTACTGTCGATAATTACGGGTATGCTGATAAAGAGCATGTCAAGCTAGAAATGGATGATGAAGAAGTTGACATTACAAGGGAAGATGAATTAGGTGTTTCACAAGAGGATGAAGAGATTGCTTCTGTGCAAGAGCAGGTAAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGGCACGTCTTCAATATATAAGCATGTTTACCATTTTCATTGATTTGCAAAGTTTTCGAGTTTTATTTAATAGAAGTTAAGAACATATTTAGAACTAGTAAGATATCAGCTTTGTTCATCCCTAGACTGTAATTTTAACTTCATATTGAGATCGTTGTCTTTTTTTTTTTTCCTTCACTCGGAATTCTCTTCACATTTGAATTTATGATACATTAATTATTAATCGGTTCATAAGAGCGCATTCAGTTAATCTTCAGACACTTGGATGTCCACACTATCAAGCACAAACAACATTTTGTGAAATATTTGGTGGTGTTAATAATGGAAAATAAGATGAAACTAAGATGGCAGCAGAGTTTCTATTTCCTTCTTGATCCGTAAAAAGTTCCTTGCTTTGTTAAAATACAAATCCGAGTATATTAATGATTTATGATGAATAAAATTAATTATTTTTCATTAGAAATATTGTGCACTTGTACTTTATGCCATGTCAGAAGGCTCAATGAACTCATCTTTGTAGATACTTTTGTTATATTGCACAATGGATATTCTTATCATTGTTCCATGGCGTTTCTCCTTTTAAGTTCTGTAATAGCTGGTCGCTATCATGTCACCGAGTATCTGGGATCTGCTGCATTTAGTAAAGCTATACAAGCTCATGTCCTGCACACAGGCGTGGATGTTTGTATTAAAATTATAAAGAACAACAAGGATTTCTTTGATCAAAGCCTTGATGAAATCATATTAGGGATCAAATGATTTATTCAAGATCAAGACGAACATAAATGGTGATTTAGAGAGGAGATTTGTGAAGAAAAATGGAGTAAATGATGGTTAGATGATTTCATCCGGTTTAAATTGAAAACTATATTTTCGCTCTTTAGCGTGCATAAAAATATGTTTTCTCAAAAATCTGAAAAACATGGTGATCGTGCATGCATAAAATCATTGCTCACATAAGCAATCAAGACGAAGAAACTCTGCATAGGCGATGATCGAGTCTCACCCACAAACAAAGATGCGGTGATCGTGAATGCACAGTGAGTCAAGTCGCTCTCATGACAAAGAAAGGAAATGAGATTTTTCAAAGGATTAACATTTAAGACACATATAGCTGGATTATCTCTTGATTACTAATCCAAGTTTATTCCAGAGTAATTCTATACGTCTAGGGCCTACATTTCTATGTGTGTATTTTAAGAATACATATAAAGAATACATTTAAGACACATATTTTTATGCACGCTAAAGAGCGAAAATATAGTTTTCAATTTAAACCGGATGAAATCATCTAACCATCATTTACTCCATTTTTCTTCACAAATCTCCTCTCTAAATCACCATTTATGTTAGTTTTGAGACTGTATAACATACATGTGTTGTCATGATAATTCGATCGAAAACATTGTTGAAATTGGGGAAATCATATGCTGATGCTATCTAAAACTATGTTTTGTTGTTCAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGCCGCTATCATGTCACCGAGTATCTGGGTTCTGCTGCATTTAGTAAAGCCATACAAGCTCATGACCTGCATACAGGTGTGGATGTTTGTATTAAAATTATAAAGAACAACAAGGATTTCTTTGATCAAAGCCTTGATGAGATCAAACTCCTCAAGTATGTCGAAAAGCGTGATCCTGGAGACAAGTATCACATTTTGCGGTTATATGATTATTTCTATTAGAGTAAGTGATTTTTTATGTGCTACTTATCTTGTTAATACTTTTACATTTTACGTCCCATCTATTAGTGCAACATTAGATACTGTCCTTCGTAGGCAATTTTAACATTAATTTGATAACGAGATATAGATGACTAAATATTTATTTGTTCTGACTTGACGTTGACTTTCTTCTTTAAAATAACTGAATAAAGGTTGTTGCTGTGGTATTGATATTTATTTTTTACTTCTTCTATAGCCACTTAATGTGTTTGTGGCTATGGTATTTTTCTATACATTCCAGGATTTGTTATAAAATATAACTTTTCACACTGGTGTCATATTTTTGATAGATTTGAATTACATTACGAGGACTAAACTTTTAAGCTATATACAAGGTGATGTTGAGATATATCGATTCACTTAATCATCTGACTTATCACGTTTCATTTCTTTCTGTTGTTGCACTGCAGGAACATTTGTTAATAGTATGTGAGCTACTCAAAGCCAACTTATACGAGTTTCATAAATTCAACAGAGAATCAGGAGGGGAAGTGTACTTCACAATGCCAAGGTTGCAGGTTTGTGGAGTTCTGCTCACATTCTGATGTTAGTTTTCATTTTATCTACAACTAGCATGCAATAGACACTGACGTGGTGGTCTGTCCACTTTTCTCTAATAGAGGCCATAGTTGGCCTCCACAGAAATTAAGTTTGAAGCTTTGGACAAAATTTTATTATTTAGTATTGTTATTTTATTTTGATTACGATATTTTTAATTCAAAATTGAATTAAGGTTAGTTTAGATTTGATTTTTAGATTGATTTAAGGATTTTATTAGATTTGATTTAAAATTTAATTAGGATTAGATCAAATTTGATGGGTAAAAATGTACACTGAAGAGTTTAAATGAAGGGTGAAATTGGAAGAAAAAAGCTACAGAAAAATTTAGTATTCTCTTTATATACAGGTATAGATAGATTCCACTCCTGTCACATTACAAACATTATAAACTTGTCTTGATTTGTTATTGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAGTATTTACATAACCTTGGACTAATACATTGCGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTACAGCCGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCATATGTTCAATCCAGGTCCTATCGGCTCCTGAGGTTATTCTCGGGCTTTCATATGACAAGAAGATTGATATCTGGTCCCTTTGATGCATCTTGGCAGAACTTTGTACTGGCAATGTAAGTATAATATATGGTCTATTCAGTTTCAAAATGCCATAAATATTTTCAAACTTAAGCATGTTAAGATTCATGTCAAATTTCGTGTTGGAGGTACATATAAATGCTCTAGTGTTCCTCTCTAATCCATTAAGTCTAATTTAAACTGAAATTCACTGTTGATCCTTGAAATGTGATTTTCTCCCCTGGTGATGGCATTGTTTAGATGCCAACTTTTGTTGTATCACTCTTAGGAAGTATCTGGTAGACAGTTTAGAGTAGGATAGAATAATTTATATTGTACGTGTTTCAGGCATGTAAAAAGTAGAACATAAAATGATATAATATAAAAATGTTGAACCAAAACAAGCTGTCCCATTTCATTCCATTTGCGTTCCACTAAAATAAACTGATGAAGTGTATTTTACATGTGAAAATGATTTGGGTGCTGTTAAATAGAGGCTATATTGTAGTGGAATTTGAATACAATCACCATTGGGAACTGTTGAATAGCAGAATTTGAACAAACCACTATTTTCTGCTATCCATGATTGGGAACACTAGTTAGTTTCTGTGTTGTTTTAGTGGAACTATATGGATAGTAGAACAGGACATGGTGTCTTAATCTATTCTGTGTGTCAAACGCTGCCTTACATAACTTGACAAAATATCTTGTAGACGTGAAAATGATTTGTGACATATCAGGCACAGTGAATTTCTTTTTAGTTGTATACTCTTTGCAGTTGTAGGGTTATTATGCTTTTTTGGGTGAAACTGTGAAAGCGGATATCGAATCTGTATCTGTTATAGTACAGTGCTTTATTTGGTGTTTCTATGTTAAATACACCCATAAATTTTTCTTTCCCTATTGATATTCAACTATACTTGTTGTATTGTAGGTCTTATTTCAAAATGATTCCCATGATTCCCGGGCAACATTTACTTGCTAGGGTAATCGGGATCATCGGTCCAATTATAAGTACTTCACAAAAAAATCATATGCTTTATGAGAGGAATCAGGTAAGAAATTAATTTTTAAAATTTCTTTGCATATGAAATGCATTAGTGAACAATCTTAAAAACTTCGATATCTTTTCATTTGCATTGTCTTCAAAAAGCAATATGGGAGATAGCTCGCTAAAATTTCTGAAATTGACTATTTTCGTTCGTGTATATTGGCCATGTTTGGATAAACAGCTAAATTAAGCTTATAGTATAAATACTTATCATATAAGTGCTTATATACAAGTTATTTTCTATAATTAAAGATAAAATAAAGTCATAAGTTGTTTCCATAAACTCTTTCAAACGGTCTCATAAGGGCCCATATTATCATACGATTGTGTGTATGATAATTGATAACCTCAAATAACCGAATCGAAACATGCCTATGTTATCATACGATTGTATGTTTATCACATTGTTATAATTGTTGCCATGGCCTCCACATTTAATTATAATAGAAAAATTATTTAGTGAGGTACTGTGTATTGATATGCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAGAAGACATCTTTGAGGCACAGATTACCGATGGGGGACCAAGGCTTCATTGACTTCGTTGCTAATTTGCTCGAGGTTAACCCGAAGAAGCGACCTTCTGCATCTGAAGCTCTAAAGCACCCCTGGTTATCATACCCTTACGAACCGATATCATCTTGA
Protein sequence

>MS.gene27408.t1

MGDQGFIDFVAHLLEVNPKKRPSASEALKHPWSSEVCLINGPAKPYQIDGGRKASNTSKASISQQSKTQMSEAFDAANNVKTAEENNVPDEKKPLWLGSSGKASTEPKISLVQNKESREIDREQLKFSSSSLKENLADNVLSRTDENANSSSDVWKDCSIKTVDEVGRAFYLGKLQGSSEQNNIGGLSFPLALEKQKEEYPWLPPVKIKSEDKPLTINWSEKFESDGLATKLASADSSLLIGSYLDVPIGQEIKNAGMRKATGGSWLSVSQGISEDTSDLVSDFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKEEDDDQSFAEEDSYFSGEQYIQAKNVTASDDPIDGKLLNHSGRSRSRKWMMIDSDAADIGSEYEFHDCESGLGGSKHSHYDFSKNSMEKSFKNKKKNDEIESNKYVIGGHKDAHSQIKTHTEGNFSFPQSLQDSQMIQGGGSSKSPWLNNCNADETDDCMNAFEGSDEMLSSWRQKSSDSSPEKSSRDENNAHAVRSSNSSPTTVDNYGYADKEHVKLEMDDEEVDITREDELGVSQEDEEIASVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGVDVCIKIIKNNKDFFDQSLDEIKLLKYVEKRDPGDKYHILRYIDSLNHLTYHVSFLSVVALQEHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQYLHNLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRLLRLFSGFHMTRRLISGPFDASWQNFVLAMSYFKMIPMIPGQHLLARVIGIIGPIISTSQKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVANLLEVNPKKRPSASEALKHPWLSYPYEPISS