Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27511.t1 | XP_013449273.1 | 94.3 | 592 | 32 | 2 | 1 | 592 | 1 | 590 | 3.10E-162 | 582 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27511.t1 | A0A072UBT1 | 94.3 | 592 | 32 | 2 | 1 | 592 | 1 | 590 | 2.2e-162 | 582.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051361 | MS.gene27511 | 0.812568 | 3.97E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27511.t1 | MTR_7g073720 | 97.466 | 592 | 13 | 2 | 1 | 592 | 1 | 590 | 0.0 | 1114 |
| MS.gene27511.t1 | MTR_5g082480 | 34.323 | 539 | 254 | 25 | 74 | 528 | 77 | 599 | 2.47e-30 | 126 |
| MS.gene27511.t1 | MTR_5g082480 | 32.963 | 540 | 258 | 25 | 74 | 527 | 88 | 609 | 4.06e-30 | 125 |
| MS.gene27511.t1 | MTR_3g070300 | 32.682 | 563 | 212 | 26 | 74 | 514 | 88 | 605 | 1.78e-28 | 120 |
| MS.gene27511.t1 | MTR_7g068220 | 32.366 | 448 | 196 | 19 | 67 | 465 | 55 | 444 | 7.01e-24 | 105 |
| MS.gene27511.t1 | MTR_7g068220 | 31.991 | 422 | 181 | 18 | 93 | 465 | 1 | 365 | 6.17e-16 | 80.9 |
| MS.gene27511.t1 | MTR_7g068220 | 32.540 | 378 | 171 | 17 | 137 | 465 | 4 | 346 | 3.24e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27511.t1 | AT3G08670 | 58.407 | 565 | 190 | 18 | 34 | 592 | 42 | 567 | 2.01e-149 | 442 |
| MS.gene27511.t1 | AT2G40070 | 33.129 | 489 | 203 | 15 | 69 | 467 | 79 | 533 | 7.32e-35 | 139 |
| MS.gene27511.t1 | AT2G40070 | 33.129 | 489 | 203 | 15 | 69 | 467 | 39 | 493 | 2.80e-34 | 137 |
| MS.gene27511.t1 | AT2G40070 | 34.734 | 357 | 142 | 12 | 194 | 467 | 68 | 416 | 2.55e-22 | 100 |
| MS.gene27511.t1 | AT3G09000 | 37.061 | 313 | 131 | 15 | 199 | 467 | 177 | 467 | 6.01e-20 | 94.0 |
| MS.gene27511.t1 | AT3G51540 | 30.584 | 582 | 227 | 25 | 30 | 592 | 15 | 438 | 1.02e-17 | 86.3 |
| MS.gene27511.t1 | AT3G51540 | 32.018 | 228 | 102 | 8 | 373 | 592 | 199 | 381 | 1.35e-15 | 79.3 |
| MS.gene27511.t1 | AT3G51540 | 32.895 | 228 | 100 | 9 | 373 | 592 | 251 | 433 | 3.00e-15 | 78.6 |
| MS.gene27511.t1 | AT1G27850 | 33.819 | 343 | 133 | 18 | 18 | 354 | 20 | 274 | 3.52e-14 | 76.6 |
Find 182 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTTAGTTTCTGTTAAAT+TGG | 0.193096 | 7.3:+31120508 | MS.gene27511:intron |
| GCTTCTTCTGTTATGGTTGA+TGG | 0.223100 | 7.3:-31120079 | None:intergenic |
| TCCTGGTGCTGGCACTTTGC+GGG | 0.254022 | 7.3:+31122214 | MS.gene27511:CDS |
| GGTGGAAACTGAACGTATTC+TGG | 0.271163 | 7.3:-31121817 | None:intergenic |
| AATGGAAGAGACTCTCTTTA+TGG | 0.272117 | 7.3:+31120054 | MS.gene27511:CDS |
| GGCTCCTTATTATTTGATAA+TGG | 0.273063 | 7.3:+31123569 | MS.gene27511:CDS |
| GATCTACTCAAACTTCTTCT+TGG | 0.297444 | 7.3:-31121233 | None:intergenic |
| AGGTATTGCTTCTTCTGTTA+TGG | 0.305972 | 7.3:-31120086 | None:intergenic |
| GTCACTGAACTGCTTCTTGC+CGG | 0.307921 | 7.3:-31121585 | None:intergenic |
| GATTTAGTTTCTGTTAAATT+GGG | 0.311220 | 7.3:+31120509 | MS.gene27511:intron |
| CCTGCAGAGAGTGGCCTATC+AGG | 0.321330 | 7.3:-31122182 | None:intergenic |
| ACGACCGAGAACACTGGATT+TGG | 0.325689 | 7.3:+31122443 | MS.gene27511:CDS |
| GAGAACCTGCCTGAGCCTTT+TGG | 0.327676 | 7.3:+31123596 | MS.gene27511:CDS |
| TTCATACTTAACAGGATATA+AGG | 0.329629 | 7.3:+31123201 | MS.gene27511:intron |
| CCTCAGTTTCATCTTACATT+AGG | 0.331598 | 7.3:+31121706 | MS.gene27511:CDS |
| GAAGATGTTGAGCGGGTTAC+TGG | 0.339971 | 7.3:-31121738 | None:intergenic |
| AAATCCATTATCAAATAATA+AGG | 0.346962 | 7.3:-31123573 | None:intergenic |
| TTCATTGAACGGACGTAGTT+CGG | 0.358363 | 7.3:+31122049 | MS.gene27511:CDS |
| CTCAAAGAAGTCCTTGGATA+TGG | 0.360316 | 7.3:+31122475 | MS.gene27511:CDS |
| GGCCATCGACTCCTAGTTCT+AGG | 0.373458 | 7.3:+31121883 | MS.gene27511:CDS |
| CCTCCCAAATCCAGTGTTCT+CGG | 0.379614 | 7.3:-31122447 | None:intergenic |
| GAGCTCTGTGATGTTGGTCT+AGG | 0.384434 | 7.3:-31121858 | None:intergenic |
| AAGCAACAGTGCGTCGTAAC+GGG | 0.385069 | 7.3:-31123489 | None:intergenic |
| GGTAGGTCCCGTCCTGGTGC+TGG | 0.397382 | 7.3:+31122203 | MS.gene27511:CDS |
| CTCCTACGAGTGGGAGTTGA+AGG | 0.403014 | 7.3:-31121966 | None:intergenic |
| GATGGGGAATGTAAGTTTGC+AGG | 0.405842 | 7.3:-31121915 | None:intergenic |
| GGTAATGTTGTTCTGAGGTT+TGG | 0.407394 | 7.3:-31122161 | None:intergenic |
| TCCATTCCTTCCATTCATCA+TGG | 0.407480 | 7.3:-31120037 | None:intergenic |
| TGAGGTTTGGTGGTGTATCA+AGG | 0.407701 | 7.3:-31122148 | None:intergenic |
| GTCCTGGTGCTGGCACTTTG+CGG | 0.412701 | 7.3:+31122213 | MS.gene27511:CDS |
| GGAAAGTCAGGTGGAACAAC+AGG | 0.413901 | 7.3:-31122125 | None:intergenic |
| GCGCGGTAAGATTGGCTCTT+GGG | 0.416563 | 7.3:-31123293 | None:intergenic |
| CGTGACAACGACCGAGTTGA+TGG | 0.417986 | 7.3:-31121942 | None:intergenic |
| GGCGGCCGGACTCGTGGACT+TGG | 0.419542 | 7.3:-31122095 | None:intergenic |
| TACTTGAAGCGCGGTAAGAT+TGG | 0.423585 | 7.3:-31123301 | None:intergenic |
| CATGTTTCCATTCGTTTCGA+TGG | 0.424815 | 7.3:-31123339 | None:intergenic |
| GTAGAATTTCGAATACTTTG+TGG | 0.425811 | 7.3:-31123269 | None:intergenic |
| AGTTTCAAGGAGATCGGTTA+AGG | 0.430454 | 7.3:+31122409 | MS.gene27511:CDS |
| GGGGCAAAACCAGCTAGAAA+TGG | 0.438130 | 7.3:+31120548 | MS.gene27511:CDS |
| ACTCGTGGACTTGGTGAGCT+TGG | 0.443163 | 7.3:-31122086 | None:intergenic |
| ACGTGGTAAATGGTATCAAC+AGG | 0.447859 | 7.3:+31123390 | MS.gene27511:CDS |
| CAAAGTGCCAGCACCAGGAC+GGG | 0.456711 | 7.3:-31122210 | None:intergenic |
| AAGATTTGAAGAATACAAAC+TGG | 0.457929 | 7.3:+31123516 | MS.gene27511:CDS |
| GATATGTTGTCATCTGTAGA+AGG | 0.460615 | 7.3:+31120578 | MS.gene27511:CDS |
| TCCTCAATCCCATTTCTAGC+TGG | 0.465340 | 7.3:-31120557 | None:intergenic |
| TCAGAACAACATTACCTGAT+AGG | 0.467626 | 7.3:+31122168 | MS.gene27511:CDS |
| GGTGTATCAAGGGGAAAGTC+AGG | 0.468615 | 7.3:-31122137 | None:intergenic |
| TGCTAGGCTCCTTACTCCCC+CGG | 0.470339 | 7.3:+31121157 | MS.gene27511:intron |
| GACTCCTAGTTCTAGGCCTC+AGG | 0.470422 | 7.3:+31121890 | MS.gene27511:CDS |
| GAGGAAAGCATGATTATGAT+TGG | 0.470423 | 7.3:+31120600 | MS.gene27511:CDS |
| GTTATCATCATGGTGGTTGT+TGG | 0.471078 | 7.3:-31120121 | None:intergenic |
| TTCTTCTCCTATTGTCAGTA+GGG | 0.472216 | 7.3:+31122283 | MS.gene27511:CDS |
| CGACCGAGAACACTGGATTT+GGG | 0.472679 | 7.3:+31122444 | MS.gene27511:CDS |
| CCGAGTTGATGGAGCGGATG+GGG | 0.472937 | 7.3:-31121931 | None:intergenic |
| GAATATGATGAGAGGAAGAG+AGG | 0.478833 | 7.3:+31123412 | MS.gene27511:CDS |
| GAAGAACTTGTTGTAGAGGA+AGG | 0.479507 | 7.3:-31122008 | None:intergenic |
| TCTTCAGATGATTCTTCTGA+TGG | 0.480146 | 7.3:+31120189 | MS.gene27511:CDS |
| ACAAGTTCTTCAATTTCAGC+TGG | 0.482784 | 7.3:+31122020 | MS.gene27511:CDS |
| CCATTCGTTTCGATGGATGT+TGG | 0.483534 | 7.3:-31123332 | None:intergenic |
| ATTCTTCTCCTATTGTCAGT+AGG | 0.484138 | 7.3:+31122282 | MS.gene27511:CDS |
| GCTCACCAAGTCCACGAGTC+CGG | 0.485243 | 7.3:+31122090 | MS.gene27511:CDS |
| GACCGAGTTGATGGAGCGGA+TGG | 0.486507 | 7.3:-31121933 | None:intergenic |
| TACAAGAGTCCAAAAGGCTC+AGG | 0.490074 | 7.3:-31123605 | None:intergenic |
| CGTGGCTTTGCCTCTGCCAA+TGG | 0.492378 | 7.3:+31122335 | MS.gene27511:CDS |
| CCCCGCAAAGTGCCAGCACC+AGG | 0.492720 | 7.3:-31122215 | None:intergenic |
| AATGTTGTTCTGAGGTTTGG+TGG | 0.493105 | 7.3:-31122158 | None:intergenic |
| GGTGAGCTTGGCCGCGATGA+CGG | 0.498388 | 7.3:-31122074 | None:intergenic |
| CTGTGAGTGTGATGTGGAGA+TGG | 0.498652 | 7.3:-31121616 | None:intergenic |
| AGCGCGGTAAGATTGGCTCT+TGG | 0.500061 | 7.3:-31123294 | None:intergenic |
| TAAGCAACAGTGCGTCGTAA+CGG | 0.502111 | 7.3:-31123490 | None:intergenic |
| GTTTCGATGGATGTTGGTGG+AGG | 0.504053 | 7.3:-31123326 | None:intergenic |
| GTTGTTGGAATGATGATTGA+AGG | 0.504100 | 7.3:-31120106 | None:intergenic |
| GGCCTTGAGCTCTGTGATGT+TGG | 0.504658 | 7.3:-31121864 | None:intergenic |
| GAATATCTCAAAGAAGTCCT+TGG | 0.504781 | 7.3:+31122469 | MS.gene27511:CDS |
| TTCGTTTCGATGGATGTTGG+TGG | 0.505732 | 7.3:-31123329 | None:intergenic |
| GTTCTCGGTCGTAGTGGTTG+AGG | 0.509245 | 7.3:-31122432 | None:intergenic |
| GGAACCTGAGGCCTAGAACT+AGG | 0.509877 | 7.3:-31121894 | None:intergenic |
| CTTCTACTGCTAAGGCCTCA+AGG | 0.514374 | 7.3:+31121258 | MS.gene27511:CDS |
| CAACAGGCTGTGGTGGCGGC+CGG | 0.515546 | 7.3:-31122109 | None:intergenic |
| GTGTAATCAACCATGATGAA+TGG | 0.516630 | 7.3:+31120027 | None:intergenic |
| AGAGGCTACAAGAGTCCAAA+AGG | 0.518349 | 7.3:-31123611 | None:intergenic |
| TTGGGGAGACTCTCAGTTGG+AGG | 0.519185 | 7.3:+31120527 | MS.gene27511:CDS |
| ACCATGATGAATGGAAGGAA+TGG | 0.520582 | 7.3:+31120036 | None:intergenic |
| GGGCAAAACCAGCTAGAAAT+GGG | 0.521227 | 7.3:+31120549 | MS.gene27511:CDS |
| TCTGCAGGTAGGTCCCGTCC+TGG | 0.522094 | 7.3:+31122197 | MS.gene27511:CDS |
| CTACTCAAACTTCTTCTTGG+AGG | 0.523779 | 7.3:-31121230 | None:intergenic |
| GAGGTTTGGTGGTGTATCAA+GGG | 0.525634 | 7.3:-31122147 | None:intergenic |
| CCTGGTGCTGGCACTTTGCG+GGG | 0.526734 | 7.3:+31122215 | MS.gene27511:CDS |
| CCTGATAGGCCACTCTCTGC+AGG | 0.528235 | 7.3:+31122182 | MS.gene27511:CDS |
| GGAACAACAGGCTGTGGTGG+CGG | 0.532834 | 7.3:-31122113 | None:intergenic |
| GTTAAGAATATTTGTAGAGG+AGG | 0.533254 | 7.3:-31121673 | None:intergenic |
| GAGCGGGTTACTGGGGAAGA+TGG | 0.533881 | 7.3:-31121729 | None:intergenic |
| ATGCTCCTGAGGTAGTTTCA+AGG | 0.534602 | 7.3:+31122396 | MS.gene27511:CDS |
| GCTGGACGTGTTTCATTGAA+CGG | 0.534767 | 7.3:+31122038 | MS.gene27511:CDS |
| TAGATCAACTTCTACTGCTA+AGG | 0.535623 | 7.3:+31121250 | MS.gene27511:CDS |
| GGAGCATGTGAAACTTTCCT+AGG | 0.537155 | 7.3:-31122380 | None:intergenic |
| GGCATGATGGCCATTGGCAG+AGG | 0.539524 | 7.3:-31122345 | None:intergenic |
| TATCAGGTAATGTTGTTCTG+AGG | 0.540143 | 7.3:-31122166 | None:intergenic |
| AAGATGTTGAGCGGGTTACT+GGG | 0.541062 | 7.3:-31121737 | None:intergenic |
| ACCAGCTAGAAATGGGATTG+AGG | 0.543808 | 7.3:+31120556 | MS.gene27511:CDS |
| TGAGGTAGTTTCAAGGAGAT+CGG | 0.545304 | 7.3:+31122403 | MS.gene27511:CDS |
| TGGGGAGACTCTCAGTTGGA+GGG | 0.545913 | 7.3:+31120528 | MS.gene27511:CDS |
| CCCCATCCGCTCCATCAACT+CGG | 0.546552 | 7.3:+31121931 | MS.gene27511:CDS |
| GAACGGCTCAGGAAATCATC+GGG | 0.546645 | 7.3:+31123223 | MS.gene27511:CDS |
| TGTGTTAAGAATATTTGTAG+AGG | 0.546852 | 7.3:-31121676 | None:intergenic |
| GTAGAGGAAGGAGATAGAGA+TGG | 0.547091 | 7.3:-31121996 | None:intergenic |
| ATTTAGTTTCTGTTAAATTG+GGG | 0.547188 | 7.3:+31120510 | MS.gene27511:intron |
| TTCTACTGCTAAGGCCTCAA+GGG | 0.547303 | 7.3:+31121259 | MS.gene27511:CDS |
| CAGGATATAAGGAACGGCTC+AGG | 0.547603 | 7.3:+31123212 | MS.gene27511:intron |
| ACCGAGTTGATGGAGCGGAT+GGG | 0.552441 | 7.3:-31121932 | None:intergenic |
| AACATCGGCATGATGGCCAT+TGG | 0.552805 | 7.3:-31122351 | None:intergenic |
| GGAGGCGCCAAGGTTGATTG+TGG | 0.554671 | 7.3:-31121212 | None:intergenic |
| CCTTGTTGAAGATGTTGAGC+GGG | 0.556891 | 7.3:-31121745 | None:intergenic |
| TCAGAAGAATCATCTGAAGA+AGG | 0.556963 | 7.3:-31120186 | None:intergenic |
| GATCAAGAGTGTTATCATCA+TGG | 0.556989 | 7.3:-31120131 | None:intergenic |
| GGTGACGACAAATGTGATCA+AGG | 0.562965 | 7.3:+31123548 | MS.gene27511:CDS |
| GGAACGGCTCAGGAAATCAT+CGG | 0.563311 | 7.3:+31123222 | MS.gene27511:CDS |
| GTGCGAGAGGTAGGAGTGGA+AGG | 0.563591 | 7.3:-31121768 | None:intergenic |
| ACTTCTTCTTGGAGGCGCCA+AGG | 0.563805 | 7.3:-31121222 | None:intergenic |
| TGTGGTGGCGGCCGGACTCG+TGG | 0.563948 | 7.3:-31122101 | None:intergenic |
| AATTGAAGAACTTGTTGTAG+AGG | 0.564094 | 7.3:-31122012 | None:intergenic |
| ACCACTACGACCGAGAACAC+TGG | 0.565721 | 7.3:+31122437 | MS.gene27511:CDS |
| AGAGTCCAAAAGGCTCAGGC+AGG | 0.572313 | 7.3:-31123601 | None:intergenic |
| GCTCATGAACATCGGCATGA+TGG | 0.572376 | 7.3:-31122358 | None:intergenic |
| GATGCTGTTGTGCGAGAGGT+AGG | 0.574918 | 7.3:-31121777 | None:intergenic |
| TCAGGTGGAACAACAGGCTG+TGG | 0.577041 | 7.3:-31122119 | None:intergenic |
| GGTGGAACAACAGGCTGTGG+TGG | 0.580096 | 7.3:-31122116 | None:intergenic |
| CAACAATCACTCTAGTAGAC+CGG | 0.581176 | 7.3:+31121566 | MS.gene27511:CDS |
| AATCAACCATGATGAATGGA+AGG | 0.583698 | 7.3:+31120031 | None:intergenic |
| ACGTATTCTGGAGGGTGTTG+AGG | 0.588168 | 7.3:-31121805 | None:intergenic |
| AAATGAACCACAATCAACCT+TGG | 0.592903 | 7.3:+31121205 | MS.gene27511:CDS |
| TCCAGTGTTCTCGGTCGTAG+TGG | 0.593237 | 7.3:-31122438 | None:intergenic |
| ATAGGAGAAGAATGTCGCCT+TGG | 0.593839 | 7.3:-31122272 | None:intergenic |
| GGCCTAGAACTAGGAGTCGA+TGG | 0.595719 | 7.3:-31121885 | None:intergenic |
| GCAAAGTGCCAGCACCAGGA+CGG | 0.596098 | 7.3:-31122211 | None:intergenic |
| CCTCTCGCACAACAGCATCA+AGG | 0.600553 | 7.3:+31121781 | MS.gene27511:CDS |
| GAAAGTTTCACATGCTCCTG+AGG | 0.600571 | 7.3:+31122385 | MS.gene27511:CDS |
| TGTAAGTTTGCAGGAACCTG+AGG | 0.606679 | 7.3:-31121906 | None:intergenic |
| GATCTCCTTGAAACTACCTC+AGG | 0.607656 | 7.3:-31122401 | None:intergenic |
| GTTGTACTGTGAGTGTGATG+TGG | 0.610446 | 7.3:-31121622 | None:intergenic |
| TGATGTGGAGATGGAAGAGC+GGG | 0.610628 | 7.3:-31121607 | None:intergenic |
| ATGCCGATGTTCATGAGCCT+AGG | 0.613088 | 7.3:+31122363 | MS.gene27511:CDS |
| GACCAACATCACAGAGCTCA+AGG | 0.613481 | 7.3:+31121862 | MS.gene27511:CDS |
| CTTCTCCTATTGTCAGTAGG+GGG | 0.614974 | 7.3:+31122285 | MS.gene27511:CDS |
| CCAACATCCATCGAAACGAA+TGG | 0.616440 | 7.3:+31123332 | MS.gene27511:CDS |
| CCTTGATGCTGTTGTGCGAG+AGG | 0.618072 | 7.3:-31121781 | None:intergenic |
| AATACAAACTGGCTGCATAG+TGG | 0.619893 | 7.3:+31123527 | MS.gene27511:CDS |
| ATAGGCCACTCTCTGCAGGT+AGG | 0.624588 | 7.3:+31122186 | MS.gene27511:CDS |
| GGATATGGCTATCAAGCACA+TGG | 0.628067 | 7.3:+31122490 | MS.gene27511:CDS |
| GCCTTGTTGAAGATGTTGAG+CGG | 0.628447 | 7.3:-31121746 | None:intergenic |
| TTTCCTAGGCTCATGAACAT+CGG | 0.631060 | 7.3:-31122366 | None:intergenic |
| AAATTGGGGAGACTCTCAGT+TGG | 0.631568 | 7.3:+31120524 | MS.gene27511:CDS |
| TCTTCTCCTATTGTCAGTAG+GGG | 0.634045 | 7.3:+31122284 | MS.gene27511:CDS |
| AAGCGTCGGTTAATATGCCA+AGG | 0.635693 | 7.3:+31122255 | MS.gene27511:CDS |
| CGGGACCTACCTGCAGAGAG+TGG | 0.636608 | 7.3:-31122191 | None:intergenic |
| TGGTATTGAACTCCTACGAG+TGG | 0.638063 | 7.3:-31121976 | None:intergenic |
| GTGCTTGATAGCCATATCCA+AGG | 0.638311 | 7.3:-31122486 | None:intergenic |
| AGGTTTGGTGGTGTATCAAG+GGG | 0.642877 | 7.3:-31122146 | None:intergenic |
| CCCGCTCAACATCTTCAACA+AGG | 0.643167 | 7.3:+31121745 | MS.gene27511:CDS |
| TAGTTCTGAAACACAAGCGT+CGG | 0.646208 | 7.3:+31122241 | MS.gene27511:CDS |
| ATCAACAGGAATATGATGAG+AGG | 0.648711 | 7.3:+31123404 | MS.gene27511:CDS |
| AGATGTTGAGCGGGTTACTG+GGG | 0.658354 | 7.3:-31121736 | None:intergenic |
| GTATCAAGGGGAAAGTCAGG+TGG | 0.659171 | 7.3:-31122134 | None:intergenic |
| TCCTACGAGTGGGAGTTGAA+GGG | 0.661003 | 7.3:-31121965 | None:intergenic |
| GGTATTGAACTCCTACGAGT+GGG | 0.662807 | 7.3:-31121975 | None:intergenic |
| ACTTAACAGGATATAAGGAA+CGG | 0.664333 | 7.3:+31123206 | MS.gene27511:intron |
| GGGGAGACTCTCAGTTGGAG+GGG | 0.666324 | 7.3:+31120529 | MS.gene27511:CDS |
| ATGTTGTCATCTGTAGAAGG+AGG | 0.667010 | 7.3:+31120581 | MS.gene27511:CDS |
| CAACGACCGAGTTGATGGAG+CGG | 0.669920 | 7.3:-31121937 | None:intergenic |
| GAAACTGAACGTATTCTGGA+GGG | 0.675558 | 7.3:-31121813 | None:intergenic |
| CCGAGAACACTGGATTTGGG+AGG | 0.682648 | 7.3:+31122447 | MS.gene27511:CDS |
| GAACCTGTCAGTAAAAGTCG+TGG | 0.688191 | 7.3:+31122317 | MS.gene27511:CDS |
| GCCCTTCAACTCCCACTCGT+AGG | 0.688488 | 7.3:+31121964 | MS.gene27511:CDS |
| GTAGTTCGGCGCCGTCATCG+CGG | 0.694565 | 7.3:+31122063 | MS.gene27511:CDS |
| GGAAACTGAACGTATTCTGG+AGG | 0.697081 | 7.3:-31121814 | None:intergenic |
| GTGGAGGAGTACTTGAAGCG+CGG | 0.698059 | 7.3:-31123310 | None:intergenic |
| CAAGAGTGTTATCATCATGG+TGG | 0.709308 | 7.3:-31120128 | None:intergenic |
| GTGATGTGGAGATGGAAGAG+CGG | 0.710085 | 7.3:-31121608 | None:intergenic |
| CCTAATGTAAGATGAAACTG+AGG | 0.713466 | 7.3:-31121706 | None:intergenic |
| AAGGTAAAGAAAGAGAACGA+CGG | 0.746213 | 7.3:-31120167 | None:intergenic |
| GAGGACCGCACATACCCTTG+AGG | 0.752520 | 7.3:-31121273 | None:intergenic |
| TGTTGTGCGAGAGGTAGGAG+TGG | 0.765834 | 7.3:-31121772 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAATAAAATTACTAT+TGG | + | chr7.3:31121098-31121117 | MS.gene27511:intron | 10.0% |
| !! | AATTTATCCTTAATTTATTT+AGG | - | chr7.3:31122943-31122962 | None:intergenic | 10.0% |
| !!! | TATTTTTCCTAAATAAATTA+AGG | + | chr7.3:31122933-31122952 | MS.gene27511:intron | 10.0% |
| !! | AAATCCATTATCAAATAATA+AGG | - | chr7.3:31123576-31123595 | None:intergenic | 15.0% |
| !! | TATATGGTTATTATAGATTA+TGG | + | chr7.3:31120322-31120341 | MS.gene27511:intron | 15.0% |
| !!! | ACATATAAAAAACATGTTTT+TGG | - | chr7.3:31120258-31120277 | None:intergenic | 15.0% |
| !!! | ATGGATTTTTTTTTAAAGAA+AGG | - | chr7.3:31121320-31121339 | None:intergenic | 15.0% |
| !!! | TGTATTTAAAAAGTCATTTT+TGG | - | chr7.3:31120835-31120854 | None:intergenic | 15.0% |
| !! | AAAAAATCCATTTATGTTAC+TGG | + | chr7.3:31121329-31121348 | MS.gene27511:intron | 20.0% |
| !! | ATACAAAGGGAAAAAAAAAA+AGG | - | chr7.3:31122873-31122892 | None:intergenic | 20.0% |
| !! | ATATAATTGAACTGTTCAAT+TGG | - | chr7.3:31120976-31120995 | None:intergenic | 20.0% |
| !! | ATATAGTTATAAACTATGAG+AGG | - | chr7.3:31121295-31121314 | None:intergenic | 20.0% |
| !! | ATTAAGAATGAGAAATGAAA+AGG | - | chr7.3:31120231-31120250 | None:intergenic | 20.0% |
| !! | TGTTATTAGTAGATTGAATT+TGG | + | chr7.3:31120659-31120678 | MS.gene27511:intron | 20.0% |
| !! | TTAAGAATGAGAAATGAAAA+GGG | - | chr7.3:31120230-31120249 | None:intergenic | 20.0% |
| !!! | AATTTAAGGTTTTACTAGTT+TGG | + | chr7.3:31120412-31120431 | MS.gene27511:intron | 20.0% |
| !!! | ATATTTGTTCCTTTAAAGTT+TGG | - | chr7.3:31123040-31123059 | None:intergenic | 20.0% |
| !!! | ATTTAGTTTCTGTTAAATTG+GGG | + | chr7.3:31120510-31120529 | MS.gene27511:intron | 20.0% |
| !!! | ATTTTTAGAGTACAATACAA+AGG | - | chr7.3:31122887-31122906 | None:intergenic | 20.0% |
| !!! | CAAACATATATACATTTTCA+TGG | - | chr7.3:31121393-31121412 | None:intergenic | 20.0% |
| !!! | GATTTAGTTTCTGTTAAATT+GGG | + | chr7.3:31120509-31120528 | MS.gene27511:intron | 20.0% |
| !!! | GTAGCTTTCTTTTAATTATA+TGG | + | chr7.3:31120306-31120325 | MS.gene27511:intron | 20.0% |
| !!! | TAAGCAAAAAACAACTTTTT+AGG | - | chr7.3:31120917-31120936 | None:intergenic | 20.0% |
| !!! | TATTTGTTCCTTTAAAGTTT+GGG | - | chr7.3:31123039-31123058 | None:intergenic | 20.0% |
| !!! | TTGTGAAAGTTTTGTTTTTT+AGG | + | chr7.3:31120378-31120397 | MS.gene27511:intron | 20.0% |
| !!! | TTTTTAGAGTACAATACAAA+GGG | - | chr7.3:31122886-31122905 | None:intergenic | 20.0% |
| ! | AAGATTTGAAGAATACAAAC+TGG | + | chr7.3:31123516-31123535 | MS.gene27511:CDS | 25.0% |
| ! | CATTGCATAATTAATGTATC+CGG | + | chr7.3:31120853-31120872 | MS.gene27511:intron | 25.0% |
| ! | TAAGAATGAGAAATGAAAAG+GGG | - | chr7.3:31120229-31120248 | None:intergenic | 25.0% |
| ! | TGTGTTAAGAATATTTGTAG+AGG | - | chr7.3:31121679-31121698 | None:intergenic | 25.0% |
| ! | TTATATCCTGTTAAGTATGA+AGG | - | chr7.3:31123202-31123221 | None:intergenic | 25.0% |
| ! | TTCATACTTAACAGGATATA+AGG | + | chr7.3:31123201-31123220 | MS.gene27511:intron | 25.0% |
| !! | AAATGACATAACCTTTTCTA+AGG | - | chr7.3:31120746-31120765 | None:intergenic | 25.0% |
| !! | AATGACATAACCTTTTCTAA+GGG | - | chr7.3:31120745-31120764 | None:intergenic | 25.0% |
| !! | GGATTTAGTTTCTGTTAAAT+TGG | + | chr7.3:31120508-31120527 | MS.gene27511:intron | 25.0% |
| !! | GTAGTTTCAAATTTTATGCA+TGG | + | chr7.3:31122591-31122610 | MS.gene27511:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr7.3:31120927-31120946 | MS.gene27511:intron | 25.0% |
| !!! | AGTTACAGTATTTTAGTTGT+TGG | + | chr7.3:31120999-31121018 | MS.gene27511:intron | 25.0% |
| !!! | ATCATGTTTTTTTCAGCTTT+CGG | + | chr7.3:31121527-31121546 | MS.gene27511:intron | 25.0% |
| !!! | GTTACAGTATTTTAGTTGTT+GGG | + | chr7.3:31121000-31121019 | MS.gene27511:intron | 25.0% |
| AACATGCTAAGCAAAAACAA+TGG | + | chr7.3:31123356-31123375 | MS.gene27511:CDS | 30.0% | |
| AAGGATTGATGTATCATTTG+GGG | - | chr7.3:31122677-31122696 | None:intergenic | 30.0% | |
| ACAAGGATTGATGTATCATT+TGG | - | chr7.3:31122679-31122698 | None:intergenic | 30.0% | |
| ACTTAACAGGATATAAGGAA+CGG | + | chr7.3:31123206-31123225 | MS.gene27511:intron | 30.0% | |
| AGATAAATATTTACTCCCTC+CGG | + | chr7.3:31120796-31120815 | MS.gene27511:intron | 30.0% | |
| AGGTGATGTGATTGAATTTA+AGG | + | chr7.3:31120398-31120417 | MS.gene27511:intron | 30.0% | |
| ATCTAACCTATAAATGTGAC+CGG | - | chr7.3:31120875-31120894 | None:intergenic | 30.0% | |
| ATGGATACCAGTAACATAAA+TGG | - | chr7.3:31121339-31121358 | None:intergenic | 30.0% | |
| CAAGGATTGATGTATCATTT+GGG | - | chr7.3:31122678-31122697 | None:intergenic | 30.0% | |
| GATTCTCAAGTCTCAATATT+TGG | + | chr7.3:31122569-31122588 | MS.gene27511:intron | 30.0% | |
| GATTGAATTTGGCCATAATA+AGG | + | chr7.3:31120670-31120689 | MS.gene27511:intron | 30.0% | |
| GGCAGATATATTAAGTATCA+TGG | - | chr7.3:31122779-31122798 | None:intergenic | 30.0% | |
| GGCTCCTTATTATTTGATAA+TGG | + | chr7.3:31123569-31123588 | MS.gene27511:CDS | 30.0% | |
| GTAGAATTTCGAATACTTTG+TGG | - | chr7.3:31123272-31123291 | None:intergenic | 30.0% | |
| GTTAAGAATATTTGTAGAGG+AGG | - | chr7.3:31121676-31121695 | None:intergenic | 30.0% | |
| ! | TTGGGTTACTATTTGAAATG+AGG | + | chr7.3:31121018-31121037 | MS.gene27511:intron | 30.0% |
| ! | TTTTAGATCATTCCTAGATC+TGG | + | chr7.3:31120763-31120782 | MS.gene27511:intron | 30.0% |
| !! | AATTGAAGAACTTGTTGTAG+AGG | - | chr7.3:31122015-31122034 | None:intergenic | 30.0% |
| !! | TATTTTTAATCCTGCAGAAC+TGG | - | chr7.3:31122534-31122553 | None:intergenic | 30.0% |
| !!! | ATCACTGATTTTATGTTGCT+AGG | + | chr7.3:31121141-31121160 | MS.gene27511:intron | 30.0% |
| !!! | TGAAGTGATTTTGCTATTTG+TGG | + | chr7.3:31120487-31120506 | MS.gene27511:intron | 30.0% |
| !!! | TTTTCTGATGATGGAAAAAC+CGG | - | chr7.3:31121188-31121207 | None:intergenic | 30.0% |
| !!! | TTTTGGCTTATAAATGTGAC+CGG | - | chr7.3:31120818-31120837 | None:intergenic | 30.0% |
| AAAAAGGCTTATCTGTATCC+TGG | - | chr7.3:31122857-31122876 | None:intergenic | 35.0% | |
| AAATGAACCACAATCAACCT+TGG | + | chr7.3:31121205-31121224 | MS.gene27511:CDS | 35.0% | |
| AAGGTAAAGAAAGAGAACGA+CGG | - | chr7.3:31120170-31120189 | None:intergenic | 35.0% | |
| AATGGAAGAGACTCTCTTTA+TGG | + | chr7.3:31120054-31120073 | MS.gene27511:CDS | 35.0% | |
| ACAACCTAAGTCCAAAGATT+AGG | - | chr7.3:31122825-31122844 | None:intergenic | 35.0% | |
| ACAAGTTCTTCAATTTCAGC+TGG | + | chr7.3:31122020-31122039 | MS.gene27511:CDS | 35.0% | |
| ATCAACAGGAATATGATGAG+AGG | + | chr7.3:31123404-31123423 | MS.gene27511:CDS | 35.0% | |
| ATGGTCATAGTAGAGACATT+AGG | + | chr7.3:31122610-31122629 | MS.gene27511:intron | 35.0% | |
| ATGTATCCGGTCACATTTAT+AGG | + | chr7.3:31120866-31120885 | MS.gene27511:intron | 35.0% | |
| ATTCTTCTCCTATTGTCAGT+AGG | + | chr7.3:31122282-31122301 | MS.gene27511:CDS | 35.0% | |
| ATTTGGCCATAATAAGGAAG+AGG | + | chr7.3:31120676-31120695 | MS.gene27511:intron | 35.0% | |
| CAACCTAAGTCCAAAGATTA+GGG | - | chr7.3:31122824-31122843 | None:intergenic | 35.0% | |
| CAAGTAATCACTAAGCTCAA+AGG | - | chr7.3:31121433-31121452 | None:intergenic | 35.0% | |
| CCTAATGTAAGATGAAACTG+AGG | - | chr7.3:31121709-31121728 | None:intergenic | 35.0% | |
| CCTCAGTTTCATCTTACATT+AGG | + | chr7.3:31121706-31121725 | MS.gene27511:CDS | 35.0% | |
| CTGCAATTATTTCCAGATCT+AGG | - | chr7.3:31120778-31120797 | None:intergenic | 35.0% | |
| CTTTGAGCTTAGTGATTACT+TGG | + | chr7.3:31121431-31121450 | MS.gene27511:intron | 35.0% | |
| GAATATCTCAAAGAAGTCCT+TGG | + | chr7.3:31122469-31122488 | MS.gene27511:CDS | 35.0% | |
| GATATGTTGTCATCTGTAGA+AGG | + | chr7.3:31120578-31120597 | MS.gene27511:CDS | 35.0% | |
| GATCTACTCAAACTTCTTCT+TGG | - | chr7.3:31121236-31121255 | None:intergenic | 35.0% | |
| GTTGTTGGAATGATGATTGA+AGG | - | chr7.3:31120109-31120128 | None:intergenic | 35.0% | |
| TAGATCAACTTCTACTGCTA+AGG | + | chr7.3:31121250-31121269 | MS.gene27511:CDS | 35.0% | |
| TATCAGGTAATGTTGTTCTG+AGG | - | chr7.3:31122169-31122188 | None:intergenic | 35.0% | |
| TCAGAACAACATTACCTGAT+AGG | + | chr7.3:31122168-31122187 | MS.gene27511:CDS | 35.0% | |
| TCAGAACCAATATGTAAGCA+TGG | - | chr7.3:31121358-31121377 | None:intergenic | 35.0% | |
| TCAGAAGAATCATCTGAAGA+AGG | - | chr7.3:31120189-31120208 | None:intergenic | 35.0% | |
| TCTTCAGATGATTCTTCTGA+TGG | + | chr7.3:31120189-31120208 | MS.gene27511:CDS | 35.0% | |
| TCTTTCCCTCTTCCTTATTA+TGG | - | chr7.3:31120685-31120704 | None:intergenic | 35.0% | |
| TGACGTTCATTTAAGTAGGT+TGG | - | chr7.3:31122652-31122671 | None:intergenic | 35.0% | |
| TGAGACTTCATGAATTAGAC+TGG | + | chr7.3:31122737-31122756 | MS.gene27511:intron | 35.0% | |
| TGGTATCCATGCTTACATAT+TGG | + | chr7.3:31121349-31121368 | MS.gene27511:intron | 35.0% | |
| TTAGCAGTTTCCCTTAGAAA+AGG | + | chr7.3:31120732-31120751 | MS.gene27511:intron | 35.0% | |
| TTCTTCTCCTATTGTCAGTA+GGG | + | chr7.3:31122283-31122302 | MS.gene27511:CDS | 35.0% | |
| TTGACACGTTGAAAATGATG+TGG | + | chr7.3:31121478-31121497 | MS.gene27511:intron | 35.0% | |
| TTTGGCCATAATAAGGAAGA+GGG | + | chr7.3:31120677-31120696 | MS.gene27511:intron | 35.0% | |
| ! | AGGTATTGCTTCTTCTGTTA+TGG | - | chr7.3:31120089-31120108 | None:intergenic | 35.0% |
| ! | ATGAAGGTACACGGTAAATT+AGG | - | chr7.3:31123186-31123205 | None:intergenic | 35.0% |
| ! | CTAACAAAGCATTACTGACA+AGG | - | chr7.3:31122696-31122715 | None:intergenic | 35.0% |
| ! | CTGTTAAGTATGAAGGTACA+CGG | - | chr7.3:31123195-31123214 | None:intergenic | 35.0% |
| ! | GAGGAAAGCATGATTATGAT+TGG | + | chr7.3:31120600-31120619 | MS.gene27511:CDS | 35.0% |
| ! | TGTGGTTCATTTTCTGATGA+TGG | - | chr7.3:31121197-31121216 | None:intergenic | 35.0% |
| !! | ACTAGTTTGGCTTTAGTCTA+TGG | + | chr7.3:31120425-31120444 | MS.gene27511:intron | 35.0% |
| !! | ATTGGTTCTGATGAGAGAAA+AGG | + | chr7.3:31121367-31121386 | MS.gene27511:intron | 35.0% |
| !! | CTTTGGACTTAGGTTGTTTT+AGG | + | chr7.3:31122828-31122847 | MS.gene27511:intron | 35.0% |
| !! | GATCAAGAGTGTTATCATCA+TGG | - | chr7.3:31120134-31120153 | None:intergenic | 35.0% |
| !! | TCTCATTTTGACGTGGTAAA+TGG | + | chr7.3:31123380-31123399 | MS.gene27511:CDS | 35.0% |
| !! | TTTCTGATGATGGAAAAACC+GGG | - | chr7.3:31121187-31121206 | None:intergenic | 35.0% |
| !!! | TTAGGTTGTTTTAGGAAACC+AGG | + | chr7.3:31122836-31122855 | MS.gene27511:intron | 35.0% |
| AATACAAACTGGCTGCATAG+TGG | + | chr7.3:31123527-31123546 | MS.gene27511:CDS | 40.0% | |
| ACGTGGTAAATGGTATCAAC+AGG | + | chr7.3:31123390-31123409 | MS.gene27511:CDS | 40.0% | |
| AGTTTCAAGGAGATCGGTTA+AGG | + | chr7.3:31122409-31122428 | MS.gene27511:CDS | 40.0% | |
| ATGTTGTCATCTGTAGAAGG+AGG | + | chr7.3:31120581-31120600 | MS.gene27511:CDS | 40.0% | |
| CAACAATCACTCTAGTAGAC+CGG | + | chr7.3:31121566-31121585 | MS.gene27511:CDS | 40.0% | |
| CACGTTGAAAATGATGTGGT+AGG | + | chr7.3:31121482-31121501 | MS.gene27511:intron | 40.0% | |
| CATCTCTGCCCAAACTTTAA+AGG | + | chr7.3:31123028-31123047 | MS.gene27511:intron | 40.0% | |
| CATGTTTCCATTCGTTTCGA+TGG | - | chr7.3:31123342-31123361 | None:intergenic | 40.0% | |
| CGTGTACCTTCATACTTAAC+AGG | + | chr7.3:31123193-31123212 | MS.gene27511:intron | 40.0% | |
| CTAAGTCCAAAGATTAGGGA+CGG | - | chr7.3:31122820-31122839 | None:intergenic | 40.0% | |
| CTAATTCATGAAGTCTCACG+AGG | - | chr7.3:31122735-31122754 | None:intergenic | 40.0% | |
| CTACTCAAACTTCTTCTTGG+AGG | - | chr7.3:31121233-31121252 | None:intergenic | 40.0% | |
| CTCAAAGAAGTCCTTGGATA+TGG | + | chr7.3:31122475-31122494 | MS.gene27511:CDS | 40.0% | |
| GAAACTGAACGTATTCTGGA+GGG | - | chr7.3:31121816-31121835 | None:intergenic | 40.0% | |
| GAATATGATGAGAGGAAGAG+AGG | + | chr7.3:31123412-31123431 | MS.gene27511:CDS | 40.0% | |
| GCTTCTTCTGTTATGGTTGA+TGG | - | chr7.3:31120082-31120101 | None:intergenic | 40.0% | |
| GGCATGACGTTCATTTAAGT+AGG | - | chr7.3:31122656-31122675 | None:intergenic | 40.0% | |
| GTTATCATCATGGTGGTTGT+TGG | - | chr7.3:31120124-31120143 | None:intergenic | 40.0% | |
| TCTTCTCCTATTGTCAGTAG+GGG | + | chr7.3:31122284-31122303 | MS.gene27511:CDS | 40.0% | |
| TGAGCTTAGTGATTACTTGG+AGG | + | chr7.3:31121434-31121453 | MS.gene27511:intron | 40.0% | |
| TGAGGTAGTTTCAAGGAGAT+CGG | + | chr7.3:31122403-31122422 | MS.gene27511:CDS | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | + | chr7.3:31120931-31120950 | MS.gene27511:intron | 40.0% | |
| TTCATTGAACGGACGTAGTT+CGG | + | chr7.3:31122049-31122068 | MS.gene27511:CDS | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr7.3:31120930-31120949 | MS.gene27511:intron | 40.0% | |
| TTTCCTAGGCTCATGAACAT+CGG | - | chr7.3:31122369-31122388 | None:intergenic | 40.0% | |
| ! | CGGAGGGAGTATAACTTTAA+TGG | - | chr7.3:31122800-31122819 | None:intergenic | 40.0% |
| !! | AATGTTGTTCTGAGGTTTGG+TGG | - | chr7.3:31122161-31122180 | None:intergenic | 40.0% |
| !! | CAAGAGTGTTATCATCATGG+TGG | - | chr7.3:31120131-31120150 | None:intergenic | 40.0% |
| !! | CAATGGATCTCATTTTGACG+TGG | + | chr7.3:31123373-31123392 | MS.gene27511:CDS | 40.0% |
| !! | CTAAGCTCAAAGGTACTAAC+TGG | - | chr7.3:31121423-31121442 | None:intergenic | 40.0% |
| !! | GAAGAACTTGTTGTAGAGGA+AGG | - | chr7.3:31122011-31122030 | None:intergenic | 40.0% |
| !! | GGTAATGTTGTTCTGAGGTT+TGG | - | chr7.3:31122164-31122183 | None:intergenic | 40.0% |
| !! | TAGTTCTGAAACACAAGCGT+CGG | + | chr7.3:31122241-31122260 | MS.gene27511:CDS | 40.0% |
| !! | TTCTGATGATGGAAAAACCG+GGG | - | chr7.3:31121186-31121205 | None:intergenic | 40.0% |
| AAATTGGGGAGACTCTCAGT+TGG | + | chr7.3:31120524-31120543 | MS.gene27511:CDS | 45.0% | |
| ACCAGCTAGAAATGGGATTG+AGG | + | chr7.3:31120556-31120575 | MS.gene27511:CDS | 45.0% | |
| ATAGGAGAAGAATGTCGCCT+TGG | - | chr7.3:31122275-31122294 | None:intergenic | 45.0% | |
| ATGCTCCTGAGGTAGTTTCA+AGG | + | chr7.3:31122396-31122415 | MS.gene27511:CDS | 45.0% | |
| CCAACATCCATCGAAACGAA+TGG | + | chr7.3:31123332-31123351 | MS.gene27511:CDS | 45.0% | |
| CCATTCGTTTCGATGGATGT+TGG | - | chr7.3:31123335-31123354 | None:intergenic | 45.0% | |
| CCTTGTTGAAGATGTTGAGC+GGG | - | chr7.3:31121748-31121767 | None:intergenic | 45.0% | |
| CGTCCCTAATCTTTGGACTT+AGG | + | chr7.3:31122818-31122837 | MS.gene27511:intron | 45.0% | |
| CTTCTCCTATTGTCAGTAGG+GGG | + | chr7.3:31122285-31122304 | MS.gene27511:CDS | 45.0% | |
| GAAAGTTTCACATGCTCCTG+AGG | + | chr7.3:31122385-31122404 | MS.gene27511:CDS | 45.0% | |
| GAACCTGTCAGTAAAAGTCG+TGG | + | chr7.3:31122317-31122336 | MS.gene27511:CDS | 45.0% | |
| GATCTCCTTGAAACTACCTC+AGG | - | chr7.3:31122404-31122423 | None:intergenic | 45.0% | |
| GATGGGGAATGTAAGTTTGC+AGG | - | chr7.3:31121918-31121937 | None:intergenic | 45.0% | |
| GCTGGACGTGTTTCATTGAA+CGG | + | chr7.3:31122038-31122057 | MS.gene27511:CDS | 45.0% | |
| GGAAACTGAACGTATTCTGG+AGG | - | chr7.3:31121817-31121836 | None:intergenic | 45.0% | |
| GGAGCATGTGAAACTTTCCT+AGG | - | chr7.3:31122383-31122402 | None:intergenic | 45.0% | |
| GGATATGGCTATCAAGCACA+TGG | + | chr7.3:31122490-31122509 | MS.gene27511:CDS | 45.0% | |
| GGCTTATAAATGTGACCGGA+GGG | - | chr7.3:31120814-31120833 | None:intergenic | 45.0% | |
| GGGCAAAACCAGCTAGAAAT+GGG | + | chr7.3:31120549-31120568 | MS.gene27511:CDS | 45.0% | |
| GGTGACGACAAATGTGATCA+AGG | + | chr7.3:31123548-31123567 | MS.gene27511:CDS | 45.0% | |
| GGTGGAAACTGAACGTATTC+TGG | - | chr7.3:31121820-31121839 | None:intergenic | 45.0% | |
| GTAGAGGAAGGAGATAGAGA+TGG | - | chr7.3:31121999-31122018 | None:intergenic | 45.0% | |
| GTTGTACTGTGAGTGTGATG+TGG | - | chr7.3:31121625-31121644 | None:intergenic | 45.0% | |
| TAAGCAACAGTGCGTCGTAA+CGG | - | chr7.3:31123493-31123512 | None:intergenic | 45.0% | |
| TACAAGAGTCCAAAAGGCTC+AGG | - | chr7.3:31123608-31123627 | None:intergenic | 45.0% | |
| TACTTGAAGCGCGGTAAGAT+TGG | - | chr7.3:31123304-31123323 | None:intergenic | 45.0% | |
| TGGCTTATAAATGTGACCGG+AGG | - | chr7.3:31120815-31120834 | None:intergenic | 45.0% | |
| TGTAAGTTTGCAGGAACCTG+AGG | - | chr7.3:31121909-31121928 | None:intergenic | 45.0% | |
| TTCGTTTCGATGGATGTTGG+TGG | - | chr7.3:31123332-31123351 | None:intergenic | 45.0% | |
| TTCTACTGCTAAGGCCTCAA+GGG | + | chr7.3:31121259-31121278 | MS.gene27511:CDS | 45.0% | |
| ! | AAGCCACGACTTTTACTGAC+AGG | - | chr7.3:31122323-31122342 | None:intergenic | 45.0% |
| ! | GCCTTGTTGAAGATGTTGAG+CGG | - | chr7.3:31121749-31121768 | None:intergenic | 45.0% |
| ! | GGTATTGAACTCCTACGAGT+GGG | - | chr7.3:31121978-31121997 | None:intergenic | 45.0% |
| ! | GTGCTTGATAGCCATATCCA+AGG | - | chr7.3:31122489-31122508 | None:intergenic | 45.0% |
| ! | TGGTATTGAACTCCTACGAG+TGG | - | chr7.3:31121979-31121998 | None:intergenic | 45.0% |
| !! | AAGATGTTGAGCGGGTTACT+GGG | - | chr7.3:31121740-31121759 | None:intergenic | 45.0% |
| !! | AAGCGTCGGTTAATATGCCA+AGG | + | chr7.3:31122255-31122274 | MS.gene27511:CDS | 45.0% |
| !! | AGGTTTGGTGGTGTATCAAG+GGG | - | chr7.3:31122149-31122168 | None:intergenic | 45.0% |
| !! | CTCTACTTTTCCAGTTCTGC+AGG | + | chr7.3:31122521-31122540 | MS.gene27511:intron | 45.0% |
| !! | GAGGTTTGGTGGTGTATCAA+GGG | - | chr7.3:31122150-31122169 | None:intergenic | 45.0% |
| !! | TCCTCAATCCCATTTCTAGC+TGG | - | chr7.3:31120560-31120579 | None:intergenic | 45.0% |
| !! | TGAGGTTTGGTGGTGTATCA+AGG | - | chr7.3:31122151-31122170 | None:intergenic | 45.0% |
| !! | TGGTCTAGGTTTTTCAGCAG+CGG | - | chr7.3:31121847-31121866 | None:intergenic | 45.0% |
| AACATCGGCATGATGGCCAT+TGG | - | chr7.3:31122354-31122373 | None:intergenic | 50.0% | |
| AAGCAACAGTGCGTCGTAAC+GGG | - | chr7.3:31123492-31123511 | None:intergenic | 50.0% | |
| ACGACCGAGAACACTGGATT+TGG | + | chr7.3:31122443-31122462 | MS.gene27511:CDS | 50.0% | |
| AGTCCAAAGATTAGGGACGG+AGG | - | chr7.3:31122817-31122836 | None:intergenic | 50.0% | |
| ATGCCGATGTTCATGAGCCT+AGG | + | chr7.3:31122363-31122382 | MS.gene27511:CDS | 50.0% | |
| CAGGATATAAGGAACGGCTC+AGG | + | chr7.3:31123212-31123231 | MS.gene27511:intron | 50.0% | |
| CCCGCTCAACATCTTCAACA+AGG | + | chr7.3:31121745-31121764 | MS.gene27511:CDS | 50.0% | |
| CCTCCCAAATCCAGTGTTCT+CGG | - | chr7.3:31122450-31122469 | None:intergenic | 50.0% | |
| CGACCGAGAACACTGGATTT+GGG | + | chr7.3:31122444-31122463 | MS.gene27511:CDS | 50.0% | |
| CTGTGAGTGTGATGTGGAGA+TGG | - | chr7.3:31121619-31121638 | None:intergenic | 50.0% | |
| CTTCTACTGCTAAGGCCTCA+AGG | + | chr7.3:31121258-31121277 | MS.gene27511:CDS | 50.0% | |
| GAACGGCTCAGGAAATCATC+GGG | + | chr7.3:31123223-31123242 | MS.gene27511:CDS | 50.0% | |
| GACCAACATCACAGAGCTCA+AGG | + | chr7.3:31121862-31121881 | MS.gene27511:CDS | 50.0% | |
| GATCTCCCCCTACTGACAAT+AGG | - | chr7.3:31122293-31122312 | None:intergenic | 50.0% | |
| GCTCATGAACATCGGCATGA+TGG | - | chr7.3:31122361-31122380 | None:intergenic | 50.0% | |
| GGAAAGTCAGGTGGAACAAC+AGG | - | chr7.3:31122128-31122147 | None:intergenic | 50.0% | |
| GGAACGGCTCAGGAAATCAT+CGG | + | chr7.3:31123222-31123241 | MS.gene27511:CDS | 50.0% | |
| GGGGCAAAACCAGCTAGAAA+TGG | + | chr7.3:31120548-31120567 | MS.gene27511:CDS | 50.0% | |
| GGTGTATCAAGGGGAAAGTC+AGG | - | chr7.3:31122140-31122159 | None:intergenic | 50.0% | |
| GTATCAAGGGGAAAGTCAGG+TGG | - | chr7.3:31122137-31122156 | None:intergenic | 50.0% | |
| GTCACTGAACTGCTTCTTGC+CGG | - | chr7.3:31121588-31121607 | None:intergenic | 50.0% | |
| GTCCAAAGATTAGGGACGGA+GGG | - | chr7.3:31122816-31122835 | None:intergenic | 50.0% | |
| GTGATGTGGAGATGGAAGAG+CGG | - | chr7.3:31121611-31121630 | None:intergenic | 50.0% | |
| GTGTTCCATCATACTCCCTC+CGG | - | chr7.3:31120949-31120968 | None:intergenic | 50.0% | |
| TCCTACGAGTGGGAGTTGAA+GGG | - | chr7.3:31121968-31121987 | None:intergenic | 50.0% | |
| TGATGTGGAGATGGAAGAGC+GGG | - | chr7.3:31121610-31121629 | None:intergenic | 50.0% | |
| ! | GAGCTCTGTGATGTTGGTCT+AGG | - | chr7.3:31121861-31121880 | None:intergenic | 50.0% |
| ! | GTTTCGATGGATGTTGGTGG+AGG | - | chr7.3:31123329-31123348 | None:intergenic | 50.0% |
| ! | TAAGGCCTCAAGGGTATGTG+CGG | + | chr7.3:31121268-31121287 | MS.gene27511:intron | 50.0% |
| !! | ACGTATTCTGGAGGGTGTTG+AGG | - | chr7.3:31121808-31121827 | None:intergenic | 50.0% |
| !! | AGATGTTGAGCGGGTTACTG+GGG | - | chr7.3:31121739-31121758 | None:intergenic | 50.0% |
| !! | GAAGATGTTGAGCGGGTTAC+TGG | - | chr7.3:31121741-31121760 | None:intergenic | 50.0% |
| ACCACTACGACCGAGAACAC+TGG | + | chr7.3:31122437-31122456 | MS.gene27511:CDS | 55.0% | |
| AGAGTCCAAAAGGCTCAGGC+AGG | - | chr7.3:31123604-31123623 | None:intergenic | 55.0% | |
| ATAGGCCACTCTCTGCAGGT+AGG | + | chr7.3:31122186-31122205 | MS.gene27511:CDS | 55.0% | |
| CCGAGAACACTGGATTTGGG+AGG | + | chr7.3:31122447-31122466 | MS.gene27511:CDS | 55.0% | |
| CCTCTCGCACAACAGCATCA+AGG | + | chr7.3:31121781-31121800 | MS.gene27511:CDS | 55.0% | |
| CCTTGATGCTGTTGTGCGAG+AGG | - | chr7.3:31121784-31121803 | None:intergenic | 55.0% | |
| CTCCCTCCGTCCCTAATCTT+TGG | + | chr7.3:31122811-31122830 | MS.gene27511:intron | 55.0% | |
| CTCCTACGAGTGGGAGTTGA+AGG | - | chr7.3:31121969-31121988 | None:intergenic | 55.0% | |
| GATGCTGTTGTGCGAGAGGT+AGG | - | chr7.3:31121780-31121799 | None:intergenic | 55.0% | |
| GGAACCTGAGGCCTAGAACT+AGG | - | chr7.3:31121897-31121916 | None:intergenic | 55.0% | |
| GGCCTAGAACTAGGAGTCGA+TGG | - | chr7.3:31121888-31121907 | None:intergenic | 55.0% | |
| GGCCTTGAGCTCTGTGATGT+TGG | - | chr7.3:31121867-31121886 | None:intergenic | 55.0% | |
| GTTCTCGGTCGTAGTGGTTG+AGG | - | chr7.3:31122435-31122454 | None:intergenic | 55.0% | |
| TCAGGTGGAACAACAGGCTG+TGG | - | chr7.3:31122122-31122141 | None:intergenic | 55.0% | |
| TCCAGTGTTCTCGGTCGTAG+TGG | - | chr7.3:31122441-31122460 | None:intergenic | 55.0% | |
| TGGGGAGACTCTCAGTTGGA+GGG | + | chr7.3:31120528-31120547 | MS.gene27511:CDS | 55.0% | |
| TGTTGTGCGAGAGGTAGGAG+TGG | - | chr7.3:31121775-31121794 | None:intergenic | 55.0% | |
| TTGGGGAGACTCTCAGTTGG+AGG | + | chr7.3:31120527-31120546 | MS.gene27511:CDS | 55.0% | |
| ! | AGCGCGGTAAGATTGGCTCT+TGG | - | chr7.3:31123297-31123316 | None:intergenic | 55.0% |
| ! | CGTGACAACGACCGAGTTGA+TGG | - | chr7.3:31121945-31121964 | None:intergenic | 55.0% |
| ! | GAGAACCTGCCTGAGCCTTT+TGG | + | chr7.3:31123596-31123615 | MS.gene27511:CDS | 55.0% |
| ! | GCGCGGTAAGATTGGCTCTT+GGG | - | chr7.3:31123296-31123315 | None:intergenic | 55.0% |
| ! | TGTGACCGGAGGGAGTATGA+TGG | + | chr7.3:31120941-31120960 | MS.gene27511:intron | 55.0% |
| !! | ACCGAGTTGATGGAGCGGAT+GGG | - | chr7.3:31121935-31121954 | None:intergenic | 55.0% |
| !! | ACTCGTGGACTTGGTGAGCT+TGG | - | chr7.3:31122089-31122108 | None:intergenic | 55.0% |
| !! | ACTTCTTCTTGGAGGCGCCA+AGG | - | chr7.3:31121225-31121244 | None:intergenic | 55.0% |
| !! | AGGTTTTTCAGCAGCGGAGC+TGG | - | chr7.3:31121841-31121860 | None:intergenic | 55.0% |
| !! | CAACGACCGAGTTGATGGAG+CGG | - | chr7.3:31121940-31121959 | None:intergenic | 55.0% |
| !! | GACTCCTAGTTCTAGGCCTC+AGG | + | chr7.3:31121890-31121909 | MS.gene27511:CDS | 55.0% |
| !! | GGCCATCGACTCCTAGTTCT+AGG | + | chr7.3:31121883-31121902 | MS.gene27511:CDS | 55.0% |
| !! | GTGGAGGAGTACTTGAAGCG+CGG | - | chr7.3:31123313-31123332 | None:intergenic | 55.0% |
| !! | TTTTTCAGCAGCGGAGCTGG+TGG | - | chr7.3:31121838-31121857 | None:intergenic | 55.0% |
| ATGGAAAAACCGGGGTCCCC+GGG | - | chr7.3:31121178-31121197 | None:intergenic | 60.0% | |
| CCCCATCCGCTCCATCAACT+CGG | + | chr7.3:31121931-31121950 | MS.gene27511:CDS | 60.0% | |
| CCTGATAGGCCACTCTCTGC+AGG | + | chr7.3:31122182-31122201 | MS.gene27511:CDS | 60.0% | |
| CCTGCAGAGAGTGGCCTATC+AGG | - | chr7.3:31122185-31122204 | None:intergenic | 60.0% | |
| GAGGACCGCACATACCCTTG+AGG | - | chr7.3:31121276-31121295 | None:intergenic | 60.0% | |
| GATGGAAAAACCGGGGTCCC+CGG | - | chr7.3:31121179-31121198 | None:intergenic | 60.0% | |
| GCCCTTCAACTCCCACTCGT+AGG | + | chr7.3:31121964-31121983 | MS.gene27511:CDS | 60.0% | |
| GCTCACCAAGTCCACGAGTC+CGG | + | chr7.3:31122090-31122109 | MS.gene27511:CDS | 60.0% | |
| GGAACAACAGGCTGTGGTGG+CGG | - | chr7.3:31122116-31122135 | None:intergenic | 60.0% | |
| GGCATGATGGCCATTGGCAG+AGG | - | chr7.3:31122348-31122367 | None:intergenic | 60.0% | |
| GGGGAGACTCTCAGTTGGAG+GGG | + | chr7.3:31120529-31120548 | MS.gene27511:CDS | 60.0% | |
| GGTGGAACAACAGGCTGTGG+TGG | - | chr7.3:31122119-31122138 | None:intergenic | 60.0% | |
| GTGCGAGAGGTAGGAGTGGA+AGG | - | chr7.3:31121771-31121790 | None:intergenic | 60.0% | |
| TGCTAGGCTCCTTACTCCCC+CGG | + | chr7.3:31121157-31121176 | MS.gene27511:intron | 60.0% | |
| ! | CAAAGTGCCAGCACCAGGAC+GGG | - | chr7.3:31122213-31122232 | None:intergenic | 60.0% |
| ! | CGTGGCTTTGCCTCTGCCAA+TGG | + | chr7.3:31122335-31122354 | MS.gene27511:CDS | 60.0% |
| ! | GCAAAGTGCCAGCACCAGGA+CGG | - | chr7.3:31122214-31122233 | None:intergenic | 60.0% |
| !! | CCGAGTTGATGGAGCGGATG+GGG | - | chr7.3:31121934-31121953 | None:intergenic | 60.0% |
| !! | GACCGAGTTGATGGAGCGGA+TGG | - | chr7.3:31121936-31121955 | None:intergenic | 60.0% |
| !! | GAGCGGGTTACTGGGGAAGA+TGG | - | chr7.3:31121732-31121751 | None:intergenic | 60.0% |
| !! | GGAGGCGCCAAGGTTGATTG+TGG | - | chr7.3:31121215-31121234 | None:intergenic | 60.0% |
| !! | GTCCTGGTGCTGGCACTTTG+CGG | + | chr7.3:31122213-31122232 | MS.gene27511:CDS | 60.0% |
| !! | TCCTGGTGCTGGCACTTTGC+GGG | + | chr7.3:31122214-31122233 | MS.gene27511:CDS | 60.0% |
| CGGGACCTACCTGCAGAGAG+TGG | - | chr7.3:31122194-31122213 | None:intergenic | 65.0% | |
| CTAGGCTCCTTACTCCCCCG+GGG | + | chr7.3:31121159-31121178 | MS.gene27511:intron | 65.0% | |
| GCTAGGCTCCTTACTCCCCC+GGG | + | chr7.3:31121158-31121177 | MS.gene27511:intron | 65.0% | |
| GGTGAGCTTGGCCGCGATGA+CGG | - | chr7.3:31122077-31122096 | None:intergenic | 65.0% | |
| GTAGTTCGGCGCCGTCATCG+CGG | + | chr7.3:31122063-31122082 | MS.gene27511:CDS | 65.0% | |
| TCTGCAGGTAGGTCCCGTCC+TGG | + | chr7.3:31122197-31122216 | MS.gene27511:CDS | 65.0% | |
| TGGAAAAACCGGGGTCCCCG+GGG | - | chr7.3:31121177-31121196 | None:intergenic | 65.0% | |
| !! | CCTGGTGCTGGCACTTTGCG+GGG | + | chr7.3:31122215-31122234 | MS.gene27511:CDS | 65.0% |
| GGAAAAACCGGGGTCCCCGG+GGG | - | chr7.3:31121176-31121195 | None:intergenic | 70.0% | |
| GGTAGGTCCCGTCCTGGTGC+TGG | + | chr7.3:31122203-31122222 | MS.gene27511:CDS | 70.0% | |
| ! | CCCCGCAAAGTGCCAGCACC+AGG | - | chr7.3:31122218-31122237 | None:intergenic | 70.0% |
| !! | CAACAGGCTGTGGTGGCGGC+CGG | - | chr7.3:31122112-31122131 | None:intergenic | 70.0% |
| CCTTACTCCCCCGGGGACCC+CGG | + | chr7.3:31121166-31121185 | MS.gene27511:CDS | 75.0% | |
| GGCGGCCGGACTCGTGGACT+TGG | - | chr7.3:31122098-31122117 | None:intergenic | 75.0% | |
| !! | TGTGGTGGCGGCCGGACTCG+TGG | - | chr7.3:31122104-31122123 | None:intergenic | 75.0% |
| ! | CCGGGGTCCCCGGGGGAGTA+AGG | - | chr7.3:31121169-31121188 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 31120039 | 31123628 | 31120039 | ID=MS.gene27511 |
| chr7.3 | mRNA | 31120039 | 31123628 | 31120039 | ID=MS.gene27511.t1;Parent=MS.gene27511 |
| chr7.3 | exon | 31120039 | 31120210 | 31120039 | ID=MS.gene27511.t1.exon1;Parent=MS.gene27511.t1 |
| chr7.3 | CDS | 31120039 | 31120210 | 31120039 | ID=cds.MS.gene27511.t1;Parent=MS.gene27511.t1 |
| chr7.3 | exon | 31120516 | 31120621 | 31120516 | ID=MS.gene27511.t1.exon2;Parent=MS.gene27511.t1 |
| chr7.3 | CDS | 31120516 | 31120621 | 31120516 | ID=cds.MS.gene27511.t1;Parent=MS.gene27511.t1 |
| chr7.3 | exon | 31121163 | 31121280 | 31121163 | ID=MS.gene27511.t1.exon3;Parent=MS.gene27511.t1 |
| chr7.3 | CDS | 31121163 | 31121280 | 31121163 | ID=cds.MS.gene27511.t1;Parent=MS.gene27511.t1 |
| chr7.3 | exon | 31121543 | 31122511 | 31121543 | ID=MS.gene27511.t1.exon4;Parent=MS.gene27511.t1 |
| chr7.3 | CDS | 31121543 | 31122511 | 31121543 | ID=cds.MS.gene27511.t1;Parent=MS.gene27511.t1 |
| chr7.3 | exon | 31123215 | 31123628 | 31123215 | ID=MS.gene27511.t1.exon5;Parent=MS.gene27511.t1 |
| chr7.3 | CDS | 31123215 | 31123628 | 31123215 | ID=cds.MS.gene27511.t1;Parent=MS.gene27511.t1 |
| Gene Sequence |
| Protein sequence |
