Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27777.t1 | XP_003623714.1 | 94.1 | 187 | 11 | 0 | 1 | 187 | 143 | 329 | 1.30E-98 | 369 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27777.t1 | Q40316 | 63.1 | 187 | 66 | 1 | 1 | 187 | 143 | 326 | 3.6e-65 | 249.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27777.t1 | G7KZB6 | 94.1 | 187 | 11 | 0 | 1 | 187 | 143 | 329 | 9.3e-99 | 369.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054920 | MS.gene27777 | 0.808899 | 2.47E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27777.t1 | MTR_7g074820 | 94.118 | 187 | 11 | 0 | 1 | 187 | 143 | 329 | 2.36e-130 | 369 |
| MS.gene27777.t1 | MTR_7g074850 | 89.305 | 187 | 20 | 0 | 1 | 187 | 143 | 329 | 2.19e-123 | 351 |
| MS.gene27777.t1 | MTR_7g074730 | 88.235 | 187 | 21 | 1 | 1 | 187 | 143 | 328 | 1.16e-121 | 347 |
| MS.gene27777.t1 | MTR_7g074880 | 73.262 | 187 | 47 | 2 | 1 | 187 | 143 | 326 | 9.20e-101 | 294 |
| MS.gene27777.t1 | MTR_7g074870 | 71.123 | 187 | 51 | 2 | 1 | 187 | 105 | 288 | 1.53e-96 | 281 |
| MS.gene27777.t1 | MTR_7g074710 | 63.102 | 187 | 66 | 1 | 1 | 187 | 143 | 326 | 3.74e-83 | 249 |
| MS.gene27777.t1 | MTR_1g022440 | 43.229 | 192 | 96 | 3 | 1 | 187 | 142 | 325 | 1.94e-47 | 158 |
| MS.gene27777.t1 | MTR_1g022445 | 43.455 | 191 | 95 | 3 | 2 | 187 | 143 | 325 | 4.21e-46 | 154 |
| MS.gene27777.t1 | MTR_4g023730 | 43.617 | 188 | 103 | 2 | 1 | 187 | 144 | 329 | 6.27e-44 | 149 |
| MS.gene27777.t1 | MTR_4g092080 | 37.368 | 190 | 112 | 3 | 1 | 185 | 149 | 336 | 8.13e-39 | 135 |
| MS.gene27777.t1 | MTR_4g081440 | 37.306 | 193 | 112 | 4 | 1 | 187 | 165 | 354 | 4.26e-38 | 134 |
| MS.gene27777.t1 | MTR_4g081440 | 37.306 | 193 | 111 | 5 | 1 | 187 | 161 | 349 | 1.11e-36 | 130 |
| MS.gene27777.t1 | MTR_2g101330 | 36.898 | 187 | 109 | 6 | 1 | 187 | 142 | 319 | 8.20e-31 | 114 |
| MS.gene27777.t1 | MTR_5g056600 | 34.043 | 188 | 115 | 4 | 1 | 187 | 140 | 319 | 8.54e-29 | 109 |
| MS.gene27777.t1 | MTR_2g013230 | 33.816 | 207 | 105 | 7 | 1 | 187 | 56 | 250 | 7.44e-25 | 97.4 |
| MS.gene27777.t1 | MTR_2g013230 | 33.816 | 207 | 105 | 7 | 1 | 187 | 146 | 340 | 4.17e-24 | 97.1 |
| MS.gene27777.t1 | MTR_3g031650 | 33.158 | 190 | 109 | 6 | 3 | 187 | 143 | 319 | 2.35e-22 | 92.0 |
| MS.gene27777.t1 | MTR_2g013250 | 32.000 | 200 | 114 | 5 | 1 | 185 | 145 | 337 | 8.34e-21 | 88.2 |
| MS.gene27777.t1 | MTR_5g072620 | 33.158 | 190 | 109 | 5 | 3 | 187 | 143 | 319 | 8.62e-21 | 87.8 |
| MS.gene27777.t1 | MTR_3g005210 | 31.915 | 188 | 117 | 4 | 1 | 187 | 143 | 320 | 1.17e-20 | 87.4 |
| MS.gene27777.t1 | MTR_4g009690 | 31.383 | 188 | 115 | 5 | 1 | 187 | 148 | 322 | 5.89e-19 | 82.8 |
| MS.gene27777.t1 | MTR_3g005170 | 31.016 | 187 | 118 | 5 | 1 | 186 | 116 | 292 | 1.27e-18 | 81.6 |
| MS.gene27777.t1 | MTR_8g062110 | 31.522 | 184 | 116 | 4 | 1 | 184 | 60 | 233 | 1.29e-18 | 80.5 |
| MS.gene27777.t1 | MTR_4g009040 | 30.851 | 188 | 117 | 5 | 1 | 187 | 152 | 327 | 1.60e-18 | 81.6 |
| MS.gene27777.t1 | MTR_4g009040 | 30.851 | 188 | 117 | 5 | 1 | 187 | 148 | 323 | 1.70e-18 | 81.6 |
| MS.gene27777.t1 | MTR_3g005170 | 31.016 | 187 | 118 | 5 | 1 | 186 | 147 | 323 | 2.45e-18 | 81.3 |
| MS.gene27777.t1 | MTR_4g009690 | 30.688 | 189 | 116 | 5 | 1 | 187 | 148 | 323 | 3.48e-18 | 80.9 |
| MS.gene27777.t1 | MTR_2g028620 | 31.122 | 196 | 110 | 7 | 1 | 187 | 147 | 326 | 4.27e-18 | 80.5 |
| MS.gene27777.t1 | MTR_8g062110 | 31.522 | 184 | 116 | 4 | 1 | 184 | 155 | 328 | 5.38e-18 | 80.5 |
| MS.gene27777.t1 | MTR_8g062110 | 31.522 | 184 | 116 | 4 | 1 | 184 | 146 | 319 | 5.66e-18 | 80.1 |
| MS.gene27777.t1 | MTR_3g005170 | 34.058 | 138 | 84 | 3 | 1 | 138 | 147 | 277 | 2.69e-17 | 77.8 |
| MS.gene27777.t1 | MTR_4g077130 | 35.252 | 139 | 81 | 5 | 1 | 138 | 146 | 276 | 4.62e-17 | 77.8 |
| MS.gene27777.t1 | MTR_7g117190 | 31.000 | 200 | 121 | 8 | 1 | 187 | 35 | 230 | 5.94e-17 | 75.9 |
| MS.gene27777.t1 | MTR_2g013260 | 33.659 | 205 | 104 | 8 | 1 | 185 | 75 | 267 | 1.17e-16 | 75.9 |
| MS.gene27777.t1 | MTR_3g031650 | 33.333 | 135 | 84 | 2 | 3 | 137 | 143 | 271 | 1.65e-16 | 75.5 |
| MS.gene27777.t1 | MTR_8g062110 | 33.577 | 137 | 83 | 2 | 1 | 137 | 60 | 188 | 1.78e-16 | 73.9 |
| MS.gene27777.t1 | MTR_2g013260 | 33.659 | 205 | 104 | 8 | 1 | 185 | 146 | 338 | 2.59e-16 | 75.9 |
| MS.gene27777.t1 | MTR_7g117190 | 31.000 | 200 | 121 | 8 | 1 | 187 | 145 | 340 | 2.63e-16 | 75.9 |
| MS.gene27777.t1 | MTR_4g006940 | 29.630 | 189 | 122 | 5 | 1 | 187 | 147 | 326 | 3.45e-16 | 75.5 |
| MS.gene27777.t1 | MTR_2g104960 | 31.217 | 189 | 119 | 6 | 1 | 187 | 150 | 329 | 3.77e-16 | 75.5 |
| MS.gene27777.t1 | MTR_8g062110 | 33.577 | 137 | 83 | 2 | 1 | 137 | 146 | 274 | 7.31e-16 | 73.9 |
| MS.gene27777.t1 | MTR_8g062110 | 33.103 | 145 | 88 | 3 | 1 | 145 | 146 | 281 | 7.50e-16 | 73.9 |
| MS.gene27777.t1 | MTR_0685s0030 | 35.593 | 118 | 70 | 3 | 22 | 138 | 3 | 115 | 2.97e-15 | 68.9 |
| MS.gene27777.t1 | MTR_2g028620 | 34.586 | 133 | 80 | 3 | 1 | 132 | 147 | 273 | 3.31e-15 | 72.4 |
| MS.gene27777.t1 | MTR_0685s0030 | 35.593 | 118 | 70 | 3 | 22 | 138 | 3 | 115 | 8.27e-15 | 68.9 |
| MS.gene27777.t1 | MTR_8g062440 | 29.787 | 188 | 120 | 5 | 1 | 187 | 145 | 321 | 2.87e-14 | 69.7 |
| MS.gene27777.t1 | MTR_8g062440 | 29.787 | 188 | 120 | 5 | 1 | 187 | 146 | 322 | 3.13e-14 | 69.7 |
| MS.gene27777.t1 | MTR_4g006940 | 31.655 | 139 | 89 | 2 | 1 | 139 | 147 | 279 | 2.23e-13 | 67.0 |
| MS.gene27777.t1 | MTR_4g006940 | 31.655 | 139 | 89 | 2 | 1 | 139 | 147 | 279 | 2.23e-13 | 67.0 |
| MS.gene27777.t1 | MTR_8g062440 | 33.333 | 135 | 82 | 3 | 1 | 135 | 145 | 271 | 2.10e-12 | 64.7 |
| MS.gene27777.t1 | MTR_4g077100 | 26.812 | 138 | 94 | 2 | 1 | 138 | 148 | 278 | 2.96e-11 | 61.2 |
| MS.gene27777.t1 | MTR_4g077100 | 26.812 | 138 | 94 | 2 | 1 | 138 | 148 | 278 | 3.28e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27777.t1 | AT2G45400 | 49.735 | 189 | 90 | 3 | 1 | 187 | 122 | 307 | 5.38e-52 | 169 |
| MS.gene27777.t1 | AT2G45400 | 49.735 | 189 | 90 | 3 | 1 | 187 | 179 | 364 | 1.52e-51 | 169 |
| MS.gene27777.t1 | AT5G42800 | 46.032 | 189 | 93 | 4 | 2 | 187 | 143 | 325 | 1.22e-45 | 154 |
| MS.gene27777.t1 | AT2G45400 | 51.064 | 141 | 65 | 2 | 1 | 139 | 179 | 317 | 2.11e-39 | 137 |
| MS.gene27777.t1 | AT4G35420 | 40.107 | 187 | 103 | 5 | 1 | 187 | 144 | 321 | 5.15e-38 | 133 |
| MS.gene27777.t1 | AT1G61720 | 36.458 | 192 | 115 | 3 | 1 | 187 | 148 | 337 | 1.30e-33 | 122 |
| MS.gene27777.t1 | AT1G68540 | 36.170 | 188 | 111 | 4 | 1 | 187 | 35 | 214 | 3.37e-29 | 107 |
| MS.gene27777.t1 | AT1G68540 | 36.170 | 188 | 111 | 4 | 1 | 187 | 142 | 321 | 2.53e-28 | 108 |
| MS.gene27777.t1 | AT2G02400 | 35.233 | 193 | 105 | 6 | 1 | 187 | 140 | 318 | 2.61e-28 | 107 |
| MS.gene27777.t1 | AT1G25460 | 34.574 | 188 | 114 | 4 | 1 | 187 | 140 | 319 | 3.30e-27 | 105 |
| MS.gene27777.t1 | AT5G58490 | 36.649 | 191 | 103 | 6 | 2 | 187 | 146 | 323 | 5.69e-24 | 96.7 |
| MS.gene27777.t1 | AT4G27250 | 30.435 | 184 | 123 | 2 | 1 | 179 | 155 | 338 | 3.03e-22 | 92.4 |
| MS.gene27777.t1 | AT4G27250 | 29.508 | 183 | 116 | 2 | 1 | 179 | 155 | 328 | 8.26e-22 | 90.9 |
| MS.gene27777.t1 | AT1G51410 | 30.319 | 188 | 120 | 5 | 1 | 187 | 146 | 323 | 4.83e-20 | 85.9 |
| MS.gene27777.t1 | AT1G76470 | 30.508 | 177 | 117 | 3 | 2 | 178 | 143 | 313 | 1.57e-19 | 84.3 |
| MS.gene27777.t1 | AT2G45400 | 56.579 | 76 | 31 | 1 | 1 | 74 | 179 | 254 | 6.08e-19 | 82.0 |
| MS.gene27777.t1 | AT1G09480 | 34.043 | 188 | 113 | 6 | 1 | 187 | 145 | 322 | 1.68e-18 | 81.6 |
| MS.gene27777.t1 | AT5G19440 | 32.620 | 187 | 115 | 4 | 1 | 186 | 147 | 323 | 2.56e-18 | 81.3 |
| MS.gene27777.t1 | AT1G09480 | 34.574 | 188 | 112 | 7 | 1 | 187 | 192 | 369 | 2.83e-18 | 81.6 |
| MS.gene27777.t1 | AT1G09490 | 34.507 | 142 | 86 | 4 | 1 | 142 | 114 | 248 | 5.55e-17 | 77.0 |
| MS.gene27777.t1 | AT1G09490 | 33.803 | 142 | 87 | 3 | 1 | 142 | 145 | 279 | 8.96e-17 | 77.0 |
| MS.gene27777.t1 | AT1G15950 | 30.159 | 189 | 121 | 5 | 1 | 187 | 45 | 224 | 3.09e-16 | 74.3 |
| MS.gene27777.t1 | AT1G15950 | 30.159 | 189 | 121 | 5 | 1 | 187 | 143 | 322 | 1.11e-15 | 73.9 |
| MS.gene27777.t1 | AT1G15950 | 30.159 | 189 | 121 | 5 | 1 | 187 | 143 | 322 | 1.11e-15 | 73.9 |
| MS.gene27777.t1 | AT1G09510 | 33.155 | 187 | 110 | 6 | 1 | 184 | 145 | 319 | 1.44e-15 | 73.6 |
| MS.gene27777.t1 | AT1G09500 | 32.394 | 142 | 89 | 4 | 1 | 142 | 112 | 246 | 1.71e-13 | 67.4 |
| MS.gene27777.t1 | AT1G15950 | 29.143 | 175 | 118 | 2 | 1 | 175 | 143 | 311 | 1.92e-13 | 67.8 |
| MS.gene27777.t1 | AT2G33600 | 28.415 | 183 | 113 | 6 | 1 | 179 | 144 | 312 | 2.26e-13 | 67.4 |
| MS.gene27777.t1 | AT1G09500 | 31.690 | 142 | 90 | 3 | 1 | 142 | 146 | 280 | 2.35e-13 | 67.4 |
| MS.gene27777.t1 | AT1G09500 | 32.593 | 135 | 84 | 3 | 1 | 135 | 146 | 273 | 3.06e-13 | 66.6 |
| MS.gene27777.t1 | AT1G66800 | 34.074 | 135 | 82 | 4 | 1 | 135 | 141 | 268 | 1.59e-12 | 65.1 |
| MS.gene27777.t1 | AT1G80820 | 28.947 | 190 | 122 | 6 | 1 | 187 | 138 | 317 | 2.79e-12 | 64.3 |
| MS.gene27777.t1 | AT1G15950 | 32.143 | 140 | 89 | 2 | 1 | 140 | 143 | 276 | 4.14e-12 | 63.5 |
| MS.gene27777.t1 | AT1G15950 | 32.143 | 140 | 89 | 2 | 1 | 140 | 143 | 276 | 4.92e-12 | 63.2 |
| MS.gene27777.t1 | AT1G15950 | 32.374 | 139 | 88 | 2 | 1 | 139 | 143 | 275 | 5.22e-12 | 63.2 |
Find 38 sgRNAs with CRISPR-Local
Find 46 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCACTAGCTTTCTTATT+TGG | 0.183198 | 7.3:-30578077 | MS.gene27777:intron |
| GAGAAAGCTGTTCTAGAATT+TGG | 0.187155 | 7.3:-30578188 | MS.gene27777:CDS |
| TTCATCTTCTAGAGAGCTTA+TGG | 0.209568 | 7.3:-30577656 | MS.gene27777:intron |
| GAGCAATTATATCTTCCTTT+TGG | 0.266827 | 7.3:+30577837 | None:intergenic |
| AGAGAGCTTATGGGAGTTAA+AGG | 0.273617 | 7.3:-30577646 | MS.gene27777:CDS |
| GATGTTGGCATTTGAAGTTC+AGG | 0.351951 | 7.3:+30577762 | None:intergenic |
| AGGTAATGGATGAAAGTTAT+TGG | 0.353449 | 7.3:-30578280 | None:intergenic |
| CATTTGAAGTTCAGGATACT+TGG | 0.362756 | 7.3:+30577770 | None:intergenic |
| ATTTGGAGAACAACATGGTT+TGG | 0.364972 | 7.3:-30578171 | MS.gene27777:CDS |
| AATTGAATGTTGCAAGGAAA+AGG | 0.371801 | 7.3:-30577536 | MS.gene27777:CDS |
| ATAAGAAAGCTAGTGAACTA+TGG | 0.381083 | 7.3:+30578081 | None:intergenic |
| GAGGTTAAATGTGGAAACTT+AGG | 0.398400 | 7.3:+30577622 | None:intergenic |
| TCATCTTCTAGAGAGCTTAT+GGG | 0.409352 | 7.3:-30577655 | MS.gene27777:intron |
| TCTTCAATAGTTGCAATGAA+TGG | 0.434791 | 7.3:+30577813 | None:intergenic |
| ATCATCCACGAGTTTCTTTG+AGG | 0.447908 | 7.3:+30577603 | None:intergenic |
| GTACGAGATACAAGCACTAA+TGG | 0.458074 | 7.3:+30577921 | None:intergenic |
| TTCATTTGTCCTAAGCTACC+TGG | 0.469552 | 7.3:-30578110 | MS.gene27777:CDS |
| CGTAGAACTCACTTGGATGT+TGG | 0.480075 | 7.3:+30577747 | None:intergenic |
| TCAAAGAAACTCGTGGATGA+TGG | 0.487540 | 7.3:-30577601 | MS.gene27777:CDS |
| CTTGAACATCCTGATCCAAA+AGG | 0.491543 | 7.3:-30577852 | MS.gene27777:CDS |
| ATTGAATGTTGCAAGGAAAA+GGG | 0.495429 | 7.3:-30577535 | MS.gene27777:CDS |
| TGGACAGATCCAGGTAGCTT+AGG | 0.512154 | 7.3:+30578101 | None:intergenic |
| ACAGCATATGACCAAGCAAA+AGG | 0.516501 | 7.3:+30578227 | None:intergenic |
| TAGCCTTGAGGAAATGTTTG+AGG | 0.521228 | 7.3:-30577563 | MS.gene27777:CDS |
| AAAGGTCCAACAACAAAAGT+TGG | 0.534220 | 7.3:+30578131 | None:intergenic |
| GCTTGTATCTCGTACCGGTA+TGG | 0.538328 | 7.3:-30577913 | MS.gene27777:CDS |
| AGTGAACTATGGACAGATCC+AGG | 0.545594 | 7.3:+30578092 | None:intergenic |
| ATCATCAACATGCACCATAC+CGG | 0.559899 | 7.3:+30577899 | None:intergenic |
| AGTTTCTTTGAGGTTAAATG+TGG | 0.564214 | 7.3:+30577613 | None:intergenic |
| CTAGAATTTGGAGAACAACA+TGG | 0.590067 | 7.3:-30578176 | MS.gene27777:CDS |
| CGTCCTCAAACATTTCCTCA+AGG | 0.591440 | 7.3:+30577560 | None:intergenic |
| CAGGATACTTGGAAGAAACA+AGG | 0.598723 | 7.3:+30577781 | None:intergenic |
| TTAGTGCTTGTATCTCGTAC+CGG | 0.600363 | 7.3:-30577918 | MS.gene27777:CDS |
| GGACGCAATTGAATGTTGCA+AGG | 0.609289 | 7.3:-30577542 | MS.gene27777:CDS |
| TTTAACCTCAAAGAAACTCG+TGG | 0.633314 | 7.3:-30577608 | MS.gene27777:CDS |
| TATGGTGCATGTTGATGATG+TGG | 0.643007 | 7.3:-30577895 | MS.gene27777:CDS |
| GGTAGCTTAGGACAAATGAA+AGG | 0.676303 | 7.3:+30578113 | None:intergenic |
| CATGTTCAAGTATAGCCTTG+AGG | 0.686468 | 7.3:-30577575 | MS.gene27777:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGATAAAAATTAACAA+AGG | - | chr7.3:30577826-30577845 | MS.gene27777:CDS | 10.0% |
| AATTGAATGTTGCAAGGAAA+AGG | - | chr7.3:30578264-30578283 | MS.gene27777:CDS | 30.0% | |
| ATAAGAAAGCTAGTGAACTA+TGG | + | chr7.3:30577722-30577741 | None:intergenic | 30.0% | |
| ATTATTTCGTAGAACTCACT+TGG | + | chr7.3:30578063-30578082 | None:intergenic | 30.0% | |
| ATTGAATGTTGCAAGGAAAA+GGG | - | chr7.3:30578265-30578284 | MS.gene27777:CDS | 30.0% | |
| TCTTCAATAGTTGCAATGAA+TGG | + | chr7.3:30577990-30578009 | None:intergenic | 30.0% | |
| ! | GAGCAATTATATCTTCCTTT+TGG | + | chr7.3:30577966-30577985 | None:intergenic | 30.0% |
| ! | TAACAAAGGAATTTTCATGC+AGG | - | chr7.3:30577840-30577859 | MS.gene27777:CDS | 30.0% |
| ! | TTATATCTTCCTTTTGGATC+AGG | + | chr7.3:30577960-30577979 | None:intergenic | 30.0% |
| !! | AGTTCACTAGCTTTCTTATT+TGG | - | chr7.3:30577723-30577742 | MS.gene27777:intron | 30.0% |
| !! | AGTTTCTTTGAGGTTAAATG+TGG | + | chr7.3:30578190-30578209 | None:intergenic | 30.0% |
| !! | CTAATACCAACTTTTGTTGT+TGG | - | chr7.3:30577663-30577682 | MS.gene27777:intron | 30.0% |
| AAAGGTCCAACAACAAAAGT+TGG | + | chr7.3:30577672-30577691 | None:intergenic | 35.0% | |
| ATTTGGAGAACAACATGGTT+TGG | - | chr7.3:30577629-30577648 | MS.gene27777:CDS | 35.0% | |
| CTAGAATTTGGAGAACAACA+TGG | - | chr7.3:30577624-30577643 | MS.gene27777:CDS | 35.0% | |
| CTTCTTACCATGTTTCTCAT+TGG | - | chr7.3:30577758-30577777 | MS.gene27777:intron | 35.0% | |
| GAGGTTAAATGTGGAAACTT+AGG | + | chr7.3:30578181-30578200 | None:intergenic | 35.0% | |
| TTTAACCTCAAAGAAACTCG+TGG | - | chr7.3:30578192-30578211 | MS.gene27777:CDS | 35.0% | |
| ! | CATTTGAAGTTCAGGATACT+TGG | + | chr7.3:30578033-30578052 | None:intergenic | 35.0% |
| ! | TCATCTTCTAGAGAGCTTAT+GGG | - | chr7.3:30578145-30578164 | MS.gene27777:CDS | 35.0% |
| ! | TTCATCTTCTAGAGAGCTTA+TGG | - | chr7.3:30578144-30578163 | MS.gene27777:CDS | 35.0% |
| !! | GAAATTTGAAGCCTTTTGCT+TGG | - | chr7.3:30577562-30577581 | MS.gene27777:CDS | 35.0% |
| !! | GAGAAAGCTGTTCTAGAATT+TGG | - | chr7.3:30577612-30577631 | MS.gene27777:CDS | 35.0% |
| ACAGCATATGACCAAGCAAA+AGG | + | chr7.3:30577576-30577595 | None:intergenic | 40.0% | |
| AGAGAGCTTATGGGAGTTAA+AGG | - | chr7.3:30578154-30578173 | MS.gene27777:CDS | 40.0% | |
| ATCATCAACATGCACCATAC+CGG | + | chr7.3:30577904-30577923 | None:intergenic | 40.0% | |
| ATCATCCACGAGTTTCTTTG+AGG | + | chr7.3:30578200-30578219 | None:intergenic | 40.0% | |
| CAGGATACTTGGAAGAAACA+AGG | + | chr7.3:30578022-30578041 | None:intergenic | 40.0% | |
| CCAAGAACCAATGAGAAACA+TGG | + | chr7.3:30577768-30577787 | None:intergenic | 40.0% | |
| CTTGAACATCCTGATCCAAA+AGG | - | chr7.3:30577948-30577967 | MS.gene27777:intron | 40.0% | |
| GGTAGCTTAGGACAAATGAA+AGG | + | chr7.3:30577690-30577709 | None:intergenic | 40.0% | |
| GTACGAGATACAAGCACTAA+TGG | + | chr7.3:30577882-30577901 | None:intergenic | 40.0% | |
| TCAAAGAAACTCGTGGATGA+TGG | - | chr7.3:30578199-30578218 | MS.gene27777:CDS | 40.0% | |
| TTAGTGCTTGTATCTCGTAC+CGG | - | chr7.3:30577882-30577901 | MS.gene27777:CDS | 40.0% | |
| TTCATTTGTCCTAAGCTACC+TGG | - | chr7.3:30577690-30577709 | MS.gene27777:intron | 40.0% | |
| ! | CATGTTCAAGTATAGCCTTG+AGG | - | chr7.3:30578225-30578244 | MS.gene27777:CDS | 40.0% |
| ! | GATGTTGGCATTTGAAGTTC+AGG | + | chr7.3:30578041-30578060 | None:intergenic | 40.0% |
| ! | TAGCCTTGAGGAAATGTTTG+AGG | - | chr7.3:30578237-30578256 | MS.gene27777:CDS | 40.0% |
| !! | CCATGTTTCTCATTGGTTCT+TGG | - | chr7.3:30577765-30577784 | MS.gene27777:CDS | 40.0% |
| !! | TATGGTGCATGTTGATGATG+TGG | - | chr7.3:30577905-30577924 | MS.gene27777:CDS | 40.0% |
| AGTGAACTATGGACAGATCC+AGG | + | chr7.3:30577711-30577730 | None:intergenic | 45.0% | |
| CGTAGAACTCACTTGGATGT+TGG | + | chr7.3:30578056-30578075 | None:intergenic | 45.0% | |
| CGTCCTCAAACATTTCCTCA+AGG | + | chr7.3:30578243-30578262 | None:intergenic | 45.0% | |
| GGACGCAATTGAATGTTGCA+AGG | - | chr7.3:30578258-30578277 | MS.gene27777:CDS | 45.0% | |
| TGGACAGATCCAGGTAGCTT+AGG | + | chr7.3:30577702-30577721 | None:intergenic | 50.0% | |
| ! | GCTTGTATCTCGTACCGGTA+TGG | - | chr7.3:30577887-30577906 | MS.gene27777:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 30577525 | 30578297 | 30577525 | ID=MS.gene27777 |
| chr7.3 | mRNA | 30577525 | 30578297 | 30577525 | ID=MS.gene27777.t1;Parent=MS.gene27777 |
| chr7.3 | exon | 30578078 | 30578297 | 30578078 | ID=MS.gene27777.t1.exon1;Parent=MS.gene27777.t1 |
| chr7.3 | CDS | 30578078 | 30578297 | 30578078 | ID=cds.MS.gene27777.t1;Parent=MS.gene27777.t1 |
| chr7.3 | exon | 30577759 | 30577960 | 30577759 | ID=MS.gene27777.t1.exon2;Parent=MS.gene27777.t1 |
| chr7.3 | CDS | 30577759 | 30577960 | 30577759 | ID=cds.MS.gene27777.t1;Parent=MS.gene27777.t1 |
| chr7.3 | exon | 30577525 | 30577666 | 30577525 | ID=MS.gene27777.t1.exon3;Parent=MS.gene27777.t1 |
| chr7.3 | CDS | 30577525 | 30577666 | 30577525 | ID=cds.MS.gene27777.t1;Parent=MS.gene27777.t1 |
| Gene Sequence |
| Protein sequence |
