AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28329

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28329.t1 MTR_4g068120 95.893 974 31 2 1 966 1 973 0.0 1904
MS.gene28329.t1 MTR_3g079310 41.593 226 103 6 428 648 455 656 1.16e-37 153
MS.gene28329.t1 MTR_3g079310 30.952 210 120 4 95 287 42 243 1.68e-25 114
MS.gene28329.t1 MTR_3g079310 28.431 204 89 4 17 165 41 242 4.17e-13 74.3
MS.gene28329.t1 MTR_3g448370 30.539 167 107 4 17 174 91 257 1.63e-13 75.1
MS.gene28329.t1 MTR_3g448370 30.539 167 107 4 17 174 193 359 2.03e-13 75.1
MS.gene28329.t1 MTR_3g448370 30.539 167 107 4 17 174 196 362 2.07e-13 75.1
MS.gene28329.t1 MTR_3g448370 30.539 167 107 4 17 174 207 373 2.16e-13 75.1
MS.gene28329.t1 MTR_2g049640 29.940 167 108 4 17 174 194 360 3.09e-13 74.3
MS.gene28329.t1 MTR_3g448370 30.539 167 107 4 17 174 196 362 3.11e-13 74.3
MS.gene28329.t1 MTR_3g101370 24.444 180 108 3 16 167 184 363 1.78e-11 67.8
MS.gene28329.t1 MTR_1g020080 25.926 216 130 5 8 195 179 392 7.35e-11 65.9
MS.gene28329.t1 MTR_3g102040 31.217 189 99 6 6 163 190 378 7.51e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28329.t1 AT2G43410 42.249 987 411 28 6 946 6 879 0.0 622
MS.gene28329.t1 AT2G43410 42.249 987 411 28 6 946 6 879 0.0 622
MS.gene28329.t1 AT2G43410 42.249 987 411 28 6 946 6 879 0.0 622
MS.gene28329.t1 AT2G43410 41.309 978 390 30 6 946 6 836 0.0 580
MS.gene28329.t1 AT2G43410 41.309 978 390 30 6 946 6 836 0.0 580
MS.gene28329.t1 AT2G43410 40.493 852 349 28 141 946 1 740 1.81e-146 454
MS.gene28329.t1 AT4G12640 53.846 130 59 1 463 591 340 469 2.72e-35 144
MS.gene28329.t1 AT4G12640 37.500 80 50 0 211 290 18 97 1.07e-14 79.0
MS.gene28329.t1 AT4G12640 53.846 130 59 1 463 591 340 469 2.72e-35 144
MS.gene28329.t1 AT4G12640 37.500 80 50 0 211 290 18 97 1.07e-14 79.0
MS.gene28329.t1 AT4G12640 53.846 130 59 1 463 591 340 469 2.72e-35 144
MS.gene28329.t1 AT4G12640 37.500 80 50 0 211 290 18 97 1.07e-14 79.0
MS.gene28329.t1 AT4G12640 53.846 130 59 1 463 591 468 597 5.10e-35 144
MS.gene28329.t1 AT4G12640 29.064 203 136 2 96 290 23 225 1.50e-24 110
MS.gene28329.t1 AT4G12640 28.502 207 92 3 17 169 21 225 1.76e-14 78.6
MS.gene28329.t1 AT1G29400 30.120 166 107 4 17 173 166 331 9.38e-13 72.8
MS.gene28329.t1 AT1G29400 30.120 166 107 4 17 173 166 331 9.38e-13 72.8
MS.gene28329.t1 AT1G29400 30.120 166 107 4 17 173 166 331 9.38e-13 72.8
MS.gene28329.t1 AT4G34110 27.933 179 98 4 9 156 205 383 1.89e-12 71.6

Find 291 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTATCAGCCTCCAATTC+TGG 0.097634 4.4:-39140380 None:intergenic
GGTCCTGAATCTGTTGTTTC+TGG 0.116220 4.4:+39138158 MS.gene28329:CDS
GGGCCTTCTGATTCTTATTC+TGG 0.161718 4.4:+39137426 MS.gene28329:CDS
TAAAGTTGTATTGTCAAATT+TGG 0.168038 4.4:-39139250 None:intergenic
ACCGATCCACAAAATATTAT+TGG 0.169786 4.4:-39137718 None:intergenic
GCTCTAAACACTGCTGCTTC+TGG 0.180393 4.4:+39139597 MS.gene28329:CDS
GAAGCTGACTTCCGTAAATT+TGG 0.196602 4.4:+39136572 MS.gene28329:CDS
TTCTCTCAATTTCACCAAAA+AGG 0.199462 4.4:-39137791 None:intergenic
CCTGATAGTGAAAATGATTT+TGG 0.203529 4.4:+39139174 MS.gene28329:CDS
GTGTTTGCTGCTGCTGTATT+TGG 0.231145 4.4:-39140448 None:intergenic
CAATTTAGATGATGCTATTC+AGG 0.239202 4.4:+39136652 MS.gene28329:CDS
AATTGTCCAGGAAAACTATT+TGG 0.240312 4.4:-39138077 None:intergenic
TAGGATCAAGGGCATGATTA+TGG 0.245432 4.4:+39137381 MS.gene28329:intron
ATGGAAACCAATCTCAATTA+TGG 0.247838 4.4:+39139772 MS.gene28329:CDS
AGATAAGGCAATAGAATTAT+TGG 0.248232 4.4:-39140240 None:intergenic
TGACAATACAACTTTATTCT+TGG 0.252905 4.4:+39139257 MS.gene28329:CDS
CCTGCACAAATGGATTTATT+TGG 0.253349 4.4:+39138035 MS.gene28329:CDS
AAAGGATGGTGGTTATTATT+AGG 0.257498 4.4:-39140149 None:intergenic
GGAAAGCCTTTCTGAGTATT+GGG 0.258137 4.4:-39140080 None:intergenic
CCTCAACTTTACCAAATTTA+CGG 0.262943 4.4:-39136583 None:intergenic
CAATTTCAAGGCAAAAGCTT+TGG 0.284058 4.4:+39137405 MS.gene28329:CDS
AAGTCTTCCTTTGTTACAGC+TGG 0.289360 4.4:-39136548 None:intergenic
AAAACTTGTTCCTCCTTTGC+AGG 0.299893 4.4:-39139465 None:intergenic
TCCATTTGTGCAGGTCGATA+TGG 0.316621 4.4:-39138026 None:intergenic
AACATACCAGTGCGGCCTTT+TGG 0.326240 4.4:+39138125 MS.gene28329:CDS
CTCTAAACACTGCTGCTTCT+GGG 0.329449 4.4:+39139598 MS.gene28329:CDS
TATTGGGTTGCTGGAAAGGC+TGG 0.336634 4.4:-39140223 None:intergenic
TCTTATCAGCCTCCAATTCT+GGG 0.337707 4.4:-39140379 None:intergenic
CCGATCCACAAAATATTATT+GGG 0.339050 4.4:-39137717 None:intergenic
CTGTCCAACCTGATCATATA+TGG 0.339151 4.4:+39138453 MS.gene28329:CDS
CAATAGAATTATTGGGTTGC+TGG 0.347240 4.4:-39140232 None:intergenic
TCACCCTTCCTCCTCATTAG+AGG 0.348403 4.4:-39137687 None:intergenic
TGGAAAGCCTTTCTGAGTAT+TGG 0.351377 4.4:-39140081 None:intergenic
TATTAGATTGCTGGAAATGC+TGG 0.352756 4.4:-39140193 None:intergenic
TGAGATTGGTTTCCATCATT+AGG 0.353476 4.4:-39139765 None:intergenic
CCATTTCAGTCATCAGTATC+AGG 0.355693 4.4:+39140046 MS.gene28329:CDS
GGTGGTTATTATTAGGTTGC+TGG 0.356161 4.4:-39140142 None:intergenic
AATTTCAAGGCAAAAGCTTT+GGG 0.356333 4.4:+39137406 MS.gene28329:CDS
AATACTCAGAAAGGCTTTCC+AGG 0.356895 4.4:+39140083 MS.gene28329:CDS
TGCTCATCGATCTGAACATT+GGG 0.358626 4.4:-39137747 None:intergenic
GATAAGGCAATAGAATTATT+GGG 0.360190 4.4:-39140239 None:intergenic
GGAGATGGCCGTTTCCAGTT+TGG 0.361061 4.4:-39138218 None:intergenic
TGGGAGGGTTTGAGTTTACT+TGG 0.361172 4.4:-39140319 None:intergenic
ATAACAATTAATTATTCTAA+TGG 0.365926 4.4:+39137921 MS.gene28329:CDS
CAAAGACATGTAAACAGCTT+TGG 0.367048 4.4:+39136510 MS.gene28329:CDS
GGAGCTGATGCTGGCGGGTA+AGG 0.367212 4.4:-39139882 None:intergenic
CCTGTTTCCATAATTGAGAT+TGG 0.373414 4.4:-39139779 None:intergenic
GTCGATATGGATGCTCATTT+AGG 0.379208 4.4:-39138013 None:intergenic
GGAAAACTATTTGGAATCAT+AGG 0.380402 4.4:-39138068 None:intergenic
TCAGCAAGCACGAGGATTAC+AGG 0.381172 4.4:+39138416 MS.gene28329:CDS
GTTGCTTTCTTCTCCTGTAC+CGG 0.384572 4.4:+39138253 MS.gene28329:CDS
TTCATCCATCTCAGCAGTTT+AGG 0.385340 4.4:+39139826 MS.gene28329:CDS
CAACCCCATCGAACAACCTA+TGG 0.392362 4.4:+39133964 MS.gene28329:CDS
AAACAACTCCTTGCTGTTGC+TGG 0.392476 4.4:-39139962 None:intergenic
CGCGTTGGCTTCGCCGGAGG+CGG 0.393982 4.4:-39133924 None:intergenic
TTCAGTTCAGCCTGCAGCTC+CGG 0.394225 4.4:+39139569 MS.gene28329:CDS
CAGGATGTTGTTGGATGGGA+GGG 0.394689 4.4:-39140334 None:intergenic
CACACTGCTCAAACGTTCTC+TGG 0.395604 4.4:+39139909 MS.gene28329:CDS
ACCGGACCTGAACGTCTATA+TGG 0.396280 4.4:+39139318 MS.gene28329:CDS
GCACCAGAGGACGATCTTGC+AGG 0.397152 4.4:-39138287 None:intergenic
GTCCCGATCCCTTTCCCTAC+AGG 0.398087 4.4:-39138527 None:intergenic
CATGATTATGGGCAATTTCA+AGG 0.399213 4.4:+39137393 MS.gene28329:CDS
GCTGAGCAATCCACAACTTC+AGG 0.404831 4.4:-39139081 None:intergenic
AAAGGCCGCACTGGTATGTT+TGG 0.408813 4.4:-39138122 None:intergenic
GGGCCAGAAACAACAGATTC+AGG 0.409831 4.4:-39138161 None:intergenic
CCAATCTCAATTATGGAAAC+AGG 0.412968 4.4:+39139779 MS.gene28329:CDS
ATCCAACAACATCCTGCCTT+TGG 0.413305 4.4:+39140341 MS.gene28329:CDS
CTTGACCGCTTAGAATCTCT+TGG 0.413595 4.4:-39138338 None:intergenic
GGACCAACAATACCACCATT+TGG 0.422900 4.4:-39138101 None:intergenic
TGCTGCATATATTGATTTGA+CGG 0.422942 4.4:-39139408 None:intergenic
AATTCTTATTGTTGAACTCC+TGG 0.423221 4.4:-39140485 None:intergenic
GCTATTGATGGTGCTAAGTC+AGG 0.423793 4.4:+39139699 MS.gene28329:CDS
GCTGCTTCTGGGTCTCAAGC+TGG 0.425452 4.4:+39139609 MS.gene28329:CDS
CCTGCATAAGGATCATCATT+AGG 0.427328 4.4:-39138377 None:intergenic
CCTGATACTGATGACTGAAA+TGG 0.428781 4.4:-39140046 None:intergenic
CTTCTCCTGTACCGGGTGCT+AGG 0.429255 4.4:+39138261 MS.gene28329:CDS
CTGATACTGATGACTGAAAT+GGG 0.431421 4.4:-39140045 None:intergenic
TTAGGTGCCACAGGAGGAAA+TGG 0.431524 4.4:-39139747 None:intergenic
AAAGACATGTAAACAGCTTT+GGG 0.432400 4.4:+39136511 MS.gene28329:CDS
TTTAGGAATAAATCAGGTCT+TGG 0.437023 4.4:-39137996 None:intergenic
TCAAATCGCAATGCCGCCTC+CGG 0.437304 4.4:+39133911 None:intergenic
AGCAGGCGACTGCGCATTTG+TGG 0.438260 4.4:-39139679 None:intergenic
AGGATCAAGGGCATGATTAT+GGG 0.438392 4.4:+39137382 MS.gene28329:intron
GCGCAGTCGCCTGCTATTGA+TGG 0.439362 4.4:+39139687 MS.gene28329:CDS
CACTACACAAGGGTCCAAAC+TGG 0.441262 4.4:+39138204 MS.gene28329:CDS
TTCTGATTTCTGTAGGATCA+AGG 0.441799 4.4:+39137369 MS.gene28329:intron
ACGACACCATATAGACGTTC+AGG 0.443101 4.4:-39139324 None:intergenic
TCCATATCGACCTGCACAAA+TGG 0.445163 4.4:+39138025 MS.gene28329:CDS
GGTGGGTATACTTGTTTAGC+AGG 0.449460 4.4:-39139531 None:intergenic
AAAACAGAGACATCACTTCC+TGG 0.449512 4.4:-39140101 None:intergenic
GAAAATTGAGTTTGCTAGAC+CGG 0.451942 4.4:+39134172 MS.gene28329:CDS
CGTGCAAAAGAGGGTCTTCA+AGG 0.452298 4.4:+39137876 MS.gene28329:CDS
TTGGGTTGCTGGAAAGGCTG+GGG 0.453886 4.4:-39140221 None:intergenic
TCCCTGTAGGGAAAGGGATC+GGG 0.457883 4.4:+39138525 MS.gene28329:CDS
TATGCAGGGAGGGGTATCCT+TGG 0.458760 4.4:+39138392 MS.gene28329:CDS
GGTAGTCTTTGCCGTGTACC+TGG 0.459292 4.4:-39137947 None:intergenic
ATTGGGTTGCTGGAAAGGCT+GGG 0.459495 4.4:-39140222 None:intergenic
TAGAATCCTCGTGCAACATT+CGG 0.459528 4.4:-39139503 None:intergenic
ACAGATTCAGGACCACCATT+AGG 0.461128 4.4:-39138149 None:intergenic
TGCTCATTTAGGAATAAATC+AGG 0.461490 4.4:-39138002 None:intergenic
TCTAAGCGGTCAAGGATAGA+TGG 0.465332 4.4:+39138347 MS.gene28329:CDS
CCTAATGATGATCCTTATGC+AGG 0.466313 4.4:+39138377 MS.gene28329:CDS
GGAAGCCTAGCACCCGGTAC+AGG 0.467553 4.4:-39138266 None:intergenic
CAAGATCGTCCTCTGGTGCA+TGG 0.467928 4.4:+39138291 MS.gene28329:CDS
TTGCCAAATGGTGGTATTGT+TGG 0.468800 4.4:+39138098 MS.gene28329:CDS
CTCCAAAGGCAGGATGTTGT+TGG 0.472577 4.4:-39140343 None:intergenic
TATTAGGTTGCTGGAAAGGA+TGG 0.472991 4.4:-39140163 None:intergenic
ACCATATAGACGTTCAGGTC+CGG 0.474787 4.4:-39139319 None:intergenic
TTGCTCAGCTAGGACGGGAT+TGG 0.474876 4.4:+39139095 MS.gene28329:CDS
AGAGCATAGTCCGGAGCTGC+AGG 0.474877 4.4:-39139579 None:intergenic
CCACCATTTGGCAATTGTCC+AGG 0.476649 4.4:-39138089 None:intergenic
CTGTATTTGGAGTAGAAGAT+TGG 0.476680 4.4:-39140435 None:intergenic
ATATATTGATTTGACGGTAC+AGG 0.477091 4.4:-39139402 None:intergenic
GCTGCAGGCTGAACTGAAGA+AGG 0.481469 4.4:-39139564 None:intergenic
GAATTATTGGGTTGCTGGAA+AGG 0.483256 4.4:-39140227 None:intergenic
AGGATACCCCTCCCTGCATA+AGG 0.483990 4.4:-39138389 None:intergenic
TTATTATTAGGTTGCTGGAA+AGG 0.484653 4.4:-39140167 None:intergenic
ACTGTTAACTTGACTAGATA+AGG 0.485918 4.4:-39140255 None:intergenic
AACCCTTGTGCAGGAGGAGA+TGG 0.486175 4.4:-39138233 None:intergenic
GAGTCTCGCGTTGGCTTCGC+CGG 0.486646 4.4:-39133930 None:intergenic
CAACATCCTGCCTTTGGAGT+TGG 0.486698 4.4:+39140347 MS.gene28329:CDS
CCTCCTGTGGCACCTAATGA+TGG 0.487831 4.4:+39139753 MS.gene28329:CDS
TTGCTTTCTTCTCCTGTACC+GGG 0.488175 4.4:+39138254 MS.gene28329:CDS
CCTGCCTTTGGAGTTGGTCA+AGG 0.489677 4.4:+39140353 MS.gene28329:CDS
GAAGAAAGCAACCCTTGTGC+AGG 0.494496 4.4:-39138242 None:intergenic
ACGCATCTAGCACGACAAAC+AGG 0.495036 4.4:-39138503 None:intergenic
CAGCAAACACAAGGAGGACA+TGG 0.495449 4.4:+39140461 MS.gene28329:CDS
TTGCTCATCGATCTGAACAT+TGG 0.497659 4.4:-39137748 None:intergenic
AGTCTTCCTTTGTTACAGCT+GGG 0.500459 4.4:-39136547 None:intergenic
ATTAGATTGCTGGAAATGCT+GGG 0.500474 4.4:-39140192 None:intergenic
GCAGGCGACTGCGCATTTGT+GGG 0.500753 4.4:-39139678 None:intergenic
CAACCCATAGGTTGTTCGAT+GGG 0.503220 4.4:-39133968 None:intergenic
ATGGGCACACCACTCGGTAC+TGG 0.503902 4.4:-39139360 None:intergenic
CGTGCTAGATGCGTCCCTGT+AGG 0.504132 4.4:+39138512 MS.gene28329:CDS
ACAAGGGTCCAAACTGGAAA+CGG 0.504707 4.4:+39138210 MS.gene28329:CDS
GTACTATTCTCGTTAAACTC+AGG 0.507590 4.4:-39138182 None:intergenic
TGAAGCCCGGCGTGCAAAAG+AGG 0.507690 4.4:+39137866 MS.gene28329:CDS
GGCGAAGCCAACGCGAGACT+CGG 0.508122 4.4:+39133932 MS.gene28329:CDS
AGCTGTAACAAAGGAAGACT+TGG 0.508151 4.4:+39136550 MS.gene28329:CDS
TTTCCATCATTAGGTGCCAC+AGG 0.509189 4.4:-39139756 None:intergenic
GCAATGTTGACTGGTATCTC+TGG 0.511378 4.4:-39140403 None:intergenic
CCAAATAAATCCATTTGTGC+AGG 0.512876 4.4:-39138035 None:intergenic
GCAGGATGTTGTTGGATGGG+AGG 0.513014 4.4:-39140335 None:intergenic
TTATTGCAGTCCTGAAGTTG+TGG 0.515252 4.4:+39139071 MS.gene28329:intron
GCAGCAGATGCCTCCTTCAC+AGG 0.516244 4.4:+39139425 MS.gene28329:CDS
AGTCCGCGCCATATATGATC+AGG 0.517580 4.4:-39138461 None:intergenic
TGGGTTGCTGGAAAGGCTGG+GGG 0.517726 4.4:-39140220 None:intergenic
TTATGTGAGGATCATTGAAA+AGG 0.521470 4.4:-39137902 None:intergenic
CAGGCAATGAAAATTATGAA+TGG 0.521937 4.4:+39136671 MS.gene28329:CDS
CGGCCATCTCCTCCTGCACA+AGG 0.521991 4.4:+39138230 MS.gene28329:CDS
TTAGAAGTGTTGATGAAGCC+CGG 0.522556 4.4:+39137853 MS.gene28329:CDS
GCGATAGATTCGCAACCCAT+AGG 0.523153 4.4:-39133980 None:intergenic
GAAAGCAACCCTTGTGCAGG+AGG 0.523157 4.4:-39138239 None:intergenic
TTTCCTGGACAATTGCCAAA+TGG 0.523635 4.4:+39138086 MS.gene28329:CDS
TCCCGATCCCTTTCCCTACA+GGG 0.525751 4.4:-39138526 None:intergenic
CGTAACAGATTCCGATCTGA+TGG 0.526096 4.4:+39134007 MS.gene28329:CDS
GGCTAGGAGCTGATGCTGGC+GGG 0.527341 4.4:-39139887 None:intergenic
ATGGATCTGTTCGTTCAATA+CGG 0.527602 4.4:+39134026 MS.gene28329:CDS
GTCCCTGTAGGGAAAGGGAT+CGG 0.529505 4.4:+39138524 MS.gene28329:CDS
GTGTGGCTAGGAGCTGATGC+TGG 0.530010 4.4:-39139891 None:intergenic
ATATTCCTAAACTGCTGAGA+TGG 0.530149 4.4:-39139831 None:intergenic
CCGTAAATTTGGTAAAGTTG+AGG 0.532036 4.4:+39136583 MS.gene28329:CDS
GTGCTAGATGCGTCCCTGTA+GGG 0.533606 4.4:+39138513 MS.gene28329:CDS
AGATGCGTCCCTGTAGGGAA+AGG 0.534006 4.4:+39138518 MS.gene28329:CDS
ACTGAATTCCTACGCTACCT+TGG 0.534308 4.4:+39139204 MS.gene28329:CDS
TCTGATTTCTGTAGGATCAA+GGG 0.536341 4.4:+39137370 MS.gene28329:intron
GATGGTGCTAAGTCAGGTGC+AGG 0.536831 4.4:+39139705 MS.gene28329:CDS
AGATCGGAATCTGTTACGTC+CGG 0.538460 4.4:-39134002 None:intergenic
TGGCGCGGACTTATTGCAAA+AGG 0.538802 4.4:+39138473 MS.gene28329:CDS
GTGGATTGCTCAGCTAGGAC+GGG 0.539227 4.4:+39139090 MS.gene28329:CDS
TGTGGATTGCTCAGCTAGGA+CGG 0.539501 4.4:+39139089 MS.gene28329:CDS
AAAGGCAGGATGTTGTTGGA+TGG 0.541768 4.4:-39140339 None:intergenic
GGACCACCATTAGGACCAAA+AGG 0.541806 4.4:-39138140 None:intergenic
TTACTCCCAGGATAAAAGCC+AGG 0.542415 4.4:-39137969 None:intergenic
CTTATCAGCCTCCAATTCTG+GGG 0.544273 4.4:-39140378 None:intergenic
ATACAGCAGCAGCAAACACA+AGG 0.544795 4.4:+39140452 MS.gene28329:CDS
CGAGAATAGTACACTACACA+AGG 0.544963 4.4:+39138193 MS.gene28329:CDS
AAACTGCTGAGATGGATGAA+TGG 0.547559 4.4:-39139823 None:intergenic
TGACTTTCAGAACATCTGTC+AGG 0.549338 4.4:-39139296 None:intergenic
TTTGTGACACCTACTCAAAG+TGG 0.549607 4.4:+39140005 MS.gene28329:CDS
CTTCCTGCAAGATCGTCCTC+TGG 0.550724 4.4:+39138284 MS.gene28329:CDS
TTATCAGCCTCCAATTCTGG+GGG 0.550904 4.4:-39140377 None:intergenic
AAGATCGTCCTCTGGTGCAT+GGG 0.551796 4.4:+39138292 MS.gene28329:CDS
CATTAGCCCAGCTGTAACAA+AGG 0.552756 4.4:+39136541 MS.gene28329:CDS
AGCAAACACAAGGAGGACAT+GGG 0.554228 4.4:+39140462 MS.gene28329:CDS
AAGGCAGGATGTTGTTGGAT+GGG 0.554386 4.4:-39140338 None:intergenic
GATTCATCCGAGTCTCGCGT+TGG 0.554911 4.4:-39133939 None:intergenic
GCTAAAGTTGCAATAAGCTC+AGG 0.556924 4.4:-39139645 None:intergenic
GATGCGTCCCTGTAGGGAAA+GGG 0.557384 4.4:+39138519 MS.gene28329:CDS
TGGTGCATGGGCACACCACT+CGG 0.558310 4.4:-39139366 None:intergenic
TACTATTCTCGTTAAACTCA+GGG 0.558382 4.4:-39138181 None:intergenic
TGTAAACAGCTTTGGGTAGG+TGG 0.560436 4.4:+39136518 MS.gene28329:CDS
TGATGATCCTTATGCAGGGA+GGG 0.561419 4.4:+39138382 MS.gene28329:CDS
AAATGTGATGATTGGTGCAT+GGG 0.561477 4.4:-39139378 None:intergenic
TAGGTTGCTGGAAAGGATGG+TGG 0.562364 4.4:-39140160 None:intergenic
GCAGTGTTTAGAGCATAGTC+CGG 0.563661 4.4:-39139588 None:intergenic
GATGATCCTTATGCAGGGAG+GGG 0.566193 4.4:+39138383 MS.gene28329:CDS
AACCCATAGGTTGTTCGATG+GGG 0.567584 4.4:-39133967 None:intergenic
TGGCTAGGAGCTGATGCTGG+CGG 0.567995 4.4:-39139888 None:intergenic
CCTTGACCAACTCCAAAGGC+AGG 0.570169 4.4:-39140353 None:intergenic
TTAGGACCAAAAGGCCGCAC+TGG 0.570367 4.4:-39138131 None:intergenic
TGTCCAGAATAAGAATCAGA+AGG 0.570600 4.4:-39137429 None:intergenic
GGGGCCTTGACCAACTCCAA+AGG 0.571607 4.4:-39140357 None:intergenic
GAAAGCCTTTCTGAGTATTG+GGG 0.571826 4.4:-39140079 None:intergenic
TGAATGGAAAACGTATCGGT+GGG 0.572266 4.4:+39136687 MS.gene28329:CDS
CCTGGACAATTGCCAAATGG+TGG 0.572421 4.4:+39138089 MS.gene28329:CDS
GACTTAGCACCATCAATAGC+AGG 0.572620 4.4:-39139696 None:intergenic
GAATAATTAATTGTTATGTG+AGG 0.572695 4.4:-39137915 None:intergenic
AGAATTCACAACCTCTAATG+AGG 0.573031 4.4:+39137676 MS.gene28329:intron
ATGAATGGAAAACGTATCGG+TGG 0.574430 4.4:+39136686 MS.gene28329:CDS
GAAGCCCGGCGTGCAAAAGA+GGG 0.575985 4.4:+39137867 MS.gene28329:CDS
TAATTATTCTAATGGTGACC+AGG 0.576148 4.4:+39137929 MS.gene28329:CDS
GAAGAAGGCCCACCTGTAGG+TGG 0.576313 4.4:-39139549 None:intergenic
GTACAGGCAAATGTGATGAT+TGG 0.577435 4.4:-39139386 None:intergenic
CAGCAAACTGCAATGTTGAC+TGG 0.579945 4.4:-39140412 None:intergenic
CGCGGACTTATTGCAAAAGG+AGG 0.580144 4.4:+39138476 MS.gene28329:CDS
ATTATGAATGGAAAACGTAT+CGG 0.581147 4.4:+39136683 MS.gene28329:CDS
AACGTTTGAGCAGTGTGGCT+AGG 0.581449 4.4:-39139903 None:intergenic
ACACAAGGAGGACATGGGCC+AGG 0.585207 4.4:+39140467 MS.gene28329:CDS
ACAACCTCTAATGAGGAGGA+AGG 0.585543 4.4:+39137683 MS.gene28329:CDS
CAAGAGATTCTAAGCGGTCA+AGG 0.586806 4.4:+39138339 MS.gene28329:CDS
AAACAAGTATACCCACCTAC+AGG 0.589718 4.4:+39139537 MS.gene28329:CDS
GCAACCCATAGGTTGTTCGA+TGG 0.590016 4.4:-39133969 None:intergenic
GACACCTACTCAAAGTGGAC+AGG 0.591054 4.4:+39140010 MS.gene28329:CDS
TCTGCGGTATATTGCATGAC+AGG 0.592140 4.4:-39140296 None:intergenic
GCTACCTGTCCACTTTGAGT+AGG 0.593575 4.4:-39140014 None:intergenic
AAATGGAGGCTTCACAGTTG+AGG 0.594398 4.4:-39139730 None:intergenic
GAAGCCTCCATTTCCTCCTG+TGG 0.594524 4.4:+39139740 MS.gene28329:CDS
AACCCCATCGAACAACCTAT+GGG 0.595453 4.4:+39133965 MS.gene28329:CDS
TCTCGCGTTGGCTTCGCCGG+AGG 0.596019 4.4:-39133927 None:intergenic
TGATATGAATCCTGCAAAGG+AGG 0.599679 4.4:+39139455 MS.gene28329:CDS
ACAGATGTTCTGAAAGTCAC+CGG 0.604625 4.4:+39139300 MS.gene28329:CDS
GTGCAAAAGAGGGTCTTCAA+GGG 0.607314 4.4:+39137877 MS.gene28329:CDS
GGTCTTGGCCCATTACTCCC+AGG 0.609272 4.4:-39137981 None:intergenic
GTTTGAGTTTACTTGGTCTG+CGG 0.610068 4.4:-39140312 None:intergenic
CTCATCGATCTGAACATTGG+GGG 0.610203 4.4:-39137745 None:intergenic
CGCGCCATATATGATCAGGT+TGG 0.610547 4.4:-39138457 None:intergenic
AAGTTGTGGATTGCTCAGCT+AGG 0.610739 4.4:+39139085 MS.gene28329:CDS
AAAGCCTTTCTGAGTATTGG+GGG 0.611169 4.4:-39140078 None:intergenic
TCATATTCAGCCTGTGAAGG+AGG 0.612052 4.4:-39139435 None:intergenic
GCTCATCGATCTGAACATTG+GGG 0.613416 4.4:-39137746 None:intergenic
CAAATGTGATGATTGGTGCA+TGG 0.614034 4.4:-39139379 None:intergenic
CAGCAGCAGCAAACACAAGG+AGG 0.615115 4.4:+39140455 MS.gene28329:CDS
TCCTCGTGCTTGCTGAACCA+AGG 0.616126 4.4:-39138409 None:intergenic
ATATCATATTCAGCCTGTGA+AGG 0.617175 4.4:-39139438 None:intergenic
CAAGTATACCCACCTACAGG+TGG 0.619282 4.4:+39139540 MS.gene28329:CDS
TAGATTGCTGGAAATGCTGG+GGG 0.620954 4.4:-39140190 None:intergenic
TACTCCCAGGATAAAAGCCA+GGG 0.621948 4.4:-39137968 None:intergenic
TCCTTGGTTCAGCAAGCACG+AGG 0.623055 4.4:+39138408 MS.gene28329:CDS
AACGAACAGATCCATCAGAT+CGG 0.624780 4.4:-39134018 None:intergenic
CTAATGATGATCCTTATGCA+GGG 0.624921 4.4:+39138378 MS.gene28329:CDS
CAACCTCTAATGAGGAGGAA+GGG 0.625198 4.4:+39137684 MS.gene28329:CDS
TTAGATTGCTGGAAATGCTG+GGG 0.625837 4.4:-39140191 None:intergenic
ATGGGTTGCGAATCTATCGC+CGG 0.631635 4.4:+39133983 MS.gene28329:CDS
GATACTGATGACTGAAATGG+GGG 0.632647 4.4:-39140043 None:intergenic
ACTGAAGAAGGCCCACCTGT+AGG 0.634196 4.4:-39139552 None:intergenic
ACATCTGTCAGGAAATCAGA+AGG 0.635324 4.4:-39139285 None:intergenic
CAGAGAACGTTTGAGCAGTG+TGG 0.636019 4.4:-39139908 None:intergenic
ACATGTAAACAGCTTTGGGT+AGG 0.636023 4.4:+39136515 MS.gene28329:CDS
GAAACAGGATCATCAAATTG+CGG 0.638436 4.4:+39139794 MS.gene28329:CDS
CTTGCAGGAAGCCTAGCACC+CGG 0.641932 4.4:-39138272 None:intergenic
TCTAATGGTGACCAGGTACA+CGG 0.642036 4.4:+39137936 MS.gene28329:CDS
ATTCACAACCTCTAATGAGG+AGG 0.642098 4.4:+39137679 MS.gene28329:CDS
GCTGTTAGCCAGCAACAGCA+AGG 0.645862 4.4:+39139954 MS.gene28329:CDS
AAGAAGGCCCACCTGTAGGT+GGG 0.647391 4.4:-39139548 None:intergenic
CTAATGAGGAGGAAGGGTGA+CGG 0.647467 4.4:+39137690 MS.gene28329:CDS
ATATGATATGAATCCTGCAA+AGG 0.648486 4.4:+39139452 MS.gene28329:CDS
TGCATGACAGGCTGATGCTG+AGG 0.648573 4.4:-39140284 None:intergenic
CACGAAAGCGTAATTGCGAG+AGG 0.651703 4.4:-39134075 None:intergenic
CAACCTGATCATATATGGCG+CGG 0.654240 4.4:+39138458 MS.gene28329:CDS
GGTGCCACAGGAGGAAATGG+AGG 0.654767 4.4:-39139744 None:intergenic
TCATCGATCTGAACATTGGG+GGG 0.655238 4.4:-39137744 None:intergenic
AAGTACATCCCATGCACCAG+AGG 0.657873 4.4:-39138300 None:intergenic
AAGCCTTTCTGAGTATTGGG+GGG 0.661982 4.4:-39140077 None:intergenic
CCATCATTAGGTGCCACAGG+AGG 0.662192 4.4:-39139753 None:intergenic
TTGATCGGAGGAAGTCAACA+CGG 0.662529 4.4:-39136718 None:intergenic
GGCCATCTCCTCCTGCACAA+GGG 0.664192 4.4:+39138231 MS.gene28329:CDS
TGATACTGATGACTGAAATG+GGG 0.666240 4.4:-39140044 None:intergenic
ATGATGATCCTTATGCAGGG+AGG 0.667404 4.4:+39138381 MS.gene28329:CDS
GAATGGAAAACGTATCGGTG+GGG 0.669466 4.4:+39136688 MS.gene28329:CDS
TATCAGCCTCCAATTCTGGG+GGG 0.672718 4.4:-39140376 None:intergenic
AAGTATACCCACCTACAGGT+GGG 0.684947 4.4:+39139541 MS.gene28329:CDS
GTACACGGCAAAGACTACCC+TGG 0.688426 4.4:+39137951 MS.gene28329:CDS
GCAAGCACGAGGATTACAGG+TGG 0.698180 4.4:+39138419 MS.gene28329:CDS
TCTGTCAGGAAATCAGAAGG+AGG 0.700935 4.4:-39139282 None:intergenic
GAGAATAGTACACTACACAA+GGG 0.722283 4.4:+39138194 MS.gene28329:CDS
ATATTCCAAGAGATTCTAAG+CGG 0.723169 4.4:+39138333 MS.gene28329:CDS
AAGTTTGCACCAGTACCGAG+TGG 0.749260 4.4:+39139351 MS.gene28329:CDS
TTACAACCGAATGTTGCACG+AGG 0.756011 4.4:+39139497 MS.gene28329:CDS
TTGGTCCAAACATACCAGTG+CGG 0.770413 4.4:+39138117 MS.gene28329:CDS
ATACTGATGACTGAAATGGG+GGG 0.791743 4.4:-39140042 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAATTAATTATTCTAA+TGG + chr4.4:39137921-39137940 MS.gene28329:CDS 10.0%
!! TTATAATTATAGAAATACAT+TGG + chr4.4:39135969-39135988 MS.gene28329:intron 10.0%
!!! TCAATTTAATTTTGTAAATA+TGG + chr4.4:39138586-39138605 MS.gene28329:intron 10.0%
!!! TCTTTAGAAAAAATAAAAAA+AGG - chr4.4:39138855-39138874 None:intergenic 10.0%
!! AGGAAGTAATTAATAATATA+CGG - chr4.4:39136806-39136825 None:intergenic 15.0%
!! ATATCTTTAGATTATAAGTT+CGG - chr4.4:39134598-39134617 None:intergenic 15.0%
!! ATGAAAATGTAATTTATTCT+AGG + chr4.4:39135280-39135299 MS.gene28329:intron 15.0%
!! TCTAAATAAAAGAAATATGT+AGG + chr4.4:39138731-39138750 MS.gene28329:intron 15.0%
!! TTTAAATCATCAATAGTAAA+AGG + chr4.4:39135802-39135821 MS.gene28329:intron 15.0%
!!! AATAATGCTTTTAGTAAATA+AGG + chr4.4:39135381-39135400 MS.gene28329:intron 15.0%
!!! CATATTATTTTTGGTAAATA+AGG + chr4.4:39138882-39138901 MS.gene28329:intron 15.0%
!!! GAAACTATTCATATTATTTT+TGG + chr4.4:39138873-39138892 MS.gene28329:intron 15.0%
!!! TAGGTTTTATGAATTTTATT+CGG + chr4.4:39138750-39138769 MS.gene28329:intron 15.0%
!!! TTGTTTTTGTTTTGTATAAT+TGG + chr4.4:39134779-39134798 MS.gene28329:intron 15.0%
!! ACAAATGAAAAATTTCTTGA+AGG - chr4.4:39137828-39137847 None:intergenic 20.0%
!! ATATTATTAATTACTTCCTC+CGG + chr4.4:39136807-39136826 MS.gene28329:intron 20.0%
!! GAATAATTAATTGTTATGTG+AGG - chr4.4:39137918-39137937 None:intergenic 20.0%
!! GAATATTATAAATTTGCGTA+TGG - chr4.4:39134655-39134674 None:intergenic 20.0%
!! GTCAAAATAAACAATCAAAT+TGG + chr4.4:39135009-39135028 MS.gene28329:intron 20.0%
!! TAAAGTTGTATTGTCAAATT+TGG - chr4.4:39139253-39139272 None:intergenic 20.0%
!! TAAATAAATTCCGTAGAAAA+AGG - chr4.4:39136254-39136273 None:intergenic 20.0%
!! TATCTTTAGATTATAAGTTC+GGG - chr4.4:39134597-39134616 None:intergenic 20.0%
!! TGTTATAATCAAGTAGAAAA+AGG - chr4.4:39136218-39136237 None:intergenic 20.0%
!! TTAGTAAATAAGGCTTATTT+AGG + chr4.4:39135391-39135410 MS.gene28329:intron 20.0%
!! TTATGTAAAAACAACATTTG+CGG - chr4.4:39136136-39136155 None:intergenic 20.0%
!!! AAGCTTTTCACATTTTAAAA+TGG + chr4.4:39137101-39137120 MS.gene28329:intron 20.0%
!!! AGATTTGGTATTATTATTCA+TGG - chr4.4:39135727-39135746 None:intergenic 20.0%
!!! ATAATTTCAATTTGGTAACT+GGG + chr4.4:39136996-39137015 MS.gene28329:intron 20.0%
!!! ATTATTGCATTCAATGTTTT+CGG + chr4.4:39134295-39134314 MS.gene28329:intron 20.0%
!!! CTTAATTTTCAATTACAATC+AGG + chr4.4:39134217-39134236 MS.gene28329:intron 20.0%
!!! GAATTCATTATGCATTTTAT+TGG - chr4.4:39134931-39134950 None:intergenic 20.0%
!!! TAATTTTGTAAATATGGAAG+AGG + chr4.4:39138592-39138611 MS.gene28329:intron 20.0%
!!! TATAATTTCAATTTGGTAAC+TGG + chr4.4:39136995-39137014 MS.gene28329:intron 20.0%
!!! TTTGATTGTTTATTTTGACA+CGG - chr4.4:39135008-39135027 None:intergenic 20.0%
!!! TTTTTTTGGTTACATTTTAC+TGG - chr4.4:39135907-39135926 None:intergenic 20.0%
! AAAATTCAAAATCGTGCAAT+AGG + chr4.4:39134847-39134866 MS.gene28329:intron 25.0%
! AAATCAGAAAACGAAATGTT+AGG - chr4.4:39137358-39137377 None:intergenic 25.0%
! AACAATCTGCTAATACTAAA+AGG - chr4.4:39136404-39136423 None:intergenic 25.0%
! AATCAGAAAACGAAATGTTA+GGG - chr4.4:39137357-39137376 None:intergenic 25.0%
! ACCAACTTTCTCTTATATAT+AGG + chr4.4:39136914-39136933 MS.gene28329:intron 25.0%
! AGATAAGGCAATAGAATTAT+TGG - chr4.4:39140243-39140262 None:intergenic 25.0%
! ATCTTTAGATTATAAGTTCG+GGG - chr4.4:39134596-39134615 None:intergenic 25.0%
! ATTATGAATGGAAAACGTAT+CGG + chr4.4:39136683-39136702 MS.gene28329:CDS 25.0%
! ATTCTTATTCTGGACAAAAA+AGG + chr4.4:39137436-39137455 MS.gene28329:CDS 25.0%
! CAATATATAAGAGAGAAAAC+TGG + chr4.4:39136832-39136851 MS.gene28329:intron 25.0%
! CAGGATCTATAATTTCAATT+TGG + chr4.4:39136988-39137007 MS.gene28329:intron 25.0%
! CTACGGAATTTATTTATTCT+TGG + chr4.4:39136258-39136277 MS.gene28329:intron 25.0%
! GAAAAGAAATTCATATCTTG+AGG - chr4.4:39136287-39136306 None:intergenic 25.0%
! GATAAGGCAATAGAATTATT+GGG - chr4.4:39140242-39140261 None:intergenic 25.0%
! GTTTGTATGGTGAATTATTA+GGG + chr4.4:39134476-39134495 MS.gene28329:intron 25.0%
! TCCTATATATAAGAGAAAGT+TGG - chr4.4:39136918-39136937 None:intergenic 25.0%
! TGACAATACAACTTTATTCT+TGG + chr4.4:39139257-39139276 MS.gene28329:CDS 25.0%
! TTCCCTTAATCAAATAAGAT+TGG - chr4.4:39135249-39135268 None:intergenic 25.0%
! TTGTTCTTCATTGTATCATT+AGG + chr4.4:39138805-39138824 MS.gene28329:intron 25.0%
! TTTAGATCACTAATTACAAC+CGG - chr4.4:39134733-39134752 None:intergenic 25.0%
!! AATTGATTTCTGCATAATTC+TGG - chr4.4:39134897-39134916 None:intergenic 25.0%
!! AGACCAATCTTATTTGATTA+AGG + chr4.4:39135243-39135262 MS.gene28329:intron 25.0%
!! CAGTTTTCTCTCTTATATAT+TGG - chr4.4:39136834-39136853 None:intergenic 25.0%
!! CTCTTTTTGCATAATTTGAT+CGG - chr4.4:39136736-39136755 None:intergenic 25.0%
!! GACCAATCTTATTTGATTAA+GGG + chr4.4:39135244-39135263 MS.gene28329:intron 25.0%
!! TAATTTCAATTTGGTAACTG+GGG + chr4.4:39136997-39137016 MS.gene28329:intron 25.0%
!! TACTATTGATGATTTAAACG+TGG - chr4.4:39135800-39135819 None:intergenic 25.0%
!! TCTTTGAAAATGATACATAC+TGG + chr4.4:39137026-39137045 MS.gene28329:intron 25.0%
!! TGCACGATTTTGAATTTTAA+TGG - chr4.4:39134845-39134864 None:intergenic 25.0%
!! TGTAATTTATTCTAGGAGAT+CGG + chr4.4:39135287-39135306 MS.gene28329:intron 25.0%
!! TTTTCTCCAATATAAGTGAT+TGG + chr4.4:39138926-39138945 MS.gene28329:intron 25.0%
!! TTTTGCTTCAAACTATTGAA+AGG - chr4.4:39136367-39136386 None:intergenic 25.0%
!! TTTTTCACAACATTTCATTG+AGG - chr4.4:39135219-39135238 None:intergenic 25.0%
!!! GCACGATTTTGAATTTTAAT+GGG - chr4.4:39134844-39134863 None:intergenic 25.0%
!!! TTTTCAAGGAAAAAGCAAAT+GGG - chr4.4:39138973-39138992 None:intergenic 25.0%
AAACATCGACGAAAAGTAAT+TGG - chr4.4:39137201-39137220 None:intergenic 30.0%
AAAGACATGTAAACAGCTTT+GGG + chr4.4:39136511-39136530 MS.gene28329:CDS 30.0%
AAGAAATTCATATCTTGAGG+TGG - chr4.4:39136284-39136303 None:intergenic 30.0%
AATGTGAAAAGCTTCACAAA+AGG - chr4.4:39137095-39137114 None:intergenic 30.0%
AATTGTCCAGGAAAACTATT+TGG - chr4.4:39138080-39138099 None:intergenic 30.0%
AATTTCAAGGCAAAAGCTTT+GGG + chr4.4:39137406-39137425 MS.gene28329:CDS 30.0%
AATTTCACCAAAAAGGATCA+TGG - chr4.4:39137787-39137806 None:intergenic 30.0%
ACAAGACTTAGAATCATTCA+TGG + chr4.4:39135844-39135863 MS.gene28329:intron 30.0%
ACAATCATGAACGTTGTAAT+TGG + chr4.4:39134951-39134970 MS.gene28329:intron 30.0%
ACATCAGCCAATATACAAAT+AGG - chr4.4:39137591-39137610 None:intergenic 30.0%
ACCGATCCACAAAATATTAT+TGG - chr4.4:39137721-39137740 None:intergenic 30.0%
ACGTGGCTATAAAAAGAAAA+TGG - chr4.4:39135783-39135802 None:intergenic 30.0%
AGAAATACATTGGACATAGT+CGG + chr4.4:39135979-39135998 MS.gene28329:intron 30.0%
ATATGATATGAATCCTGCAA+AGG + chr4.4:39139452-39139471 MS.gene28329:CDS 30.0%
ATATTCCAAGAGATTCTAAG+CGG + chr4.4:39138333-39138352 MS.gene28329:CDS 30.0%
ATCAGAAAACGAAATGTTAG+GGG - chr4.4:39137356-39137375 None:intergenic 30.0%
ATGGAAACCAATCTCAATTA+TGG + chr4.4:39139772-39139791 MS.gene28329:CDS 30.0%
ATTACATCATTAGAAGGACT+AGG - chr4.4:39135647-39135666 None:intergenic 30.0%
ATTGTAAGGTTTGTCTGATT+TGG + chr4.4:39137139-39137158 MS.gene28329:intron 30.0%
CAATTTAGATGATGCTATTC+AGG + chr4.4:39136652-39136671 MS.gene28329:CDS 30.0%
CAGGCAATGAAAATTATGAA+TGG + chr4.4:39136671-39136690 MS.gene28329:CDS 30.0%
CCGATCCACAAAATATTATT+GGG - chr4.4:39137720-39137739 None:intergenic 30.0%
CCTCAACTTTACCAAATTTA+CGG - chr4.4:39136586-39136605 None:intergenic 30.0%
CGTGGCTATAAAAAGAAAAT+GGG - chr4.4:39135782-39135801 None:intergenic 30.0%
CTTTCTCTTATATATAGGAC+CGG + chr4.4:39136919-39136938 MS.gene28329:intron 30.0%
GAAAAGTTACTTGTAGCAAA+TGG + chr4.4:39138683-39138702 MS.gene28329:intron 30.0%
GGTTTGTATGGTGAATTATT+AGG + chr4.4:39134475-39134494 MS.gene28329:intron 30.0%
GTCTCTTATAATTACTAGTC+AGG - chr4.4:39135759-39135778 None:intergenic 30.0%
GTGAAAGAATTCGAGAATTA+AGG - chr4.4:39134873-39134892 None:intergenic 30.0%
GTGAATTATTAGGGTATGTT+TGG + chr4.4:39134485-39134504 MS.gene28329:intron 30.0%
GTGGCTATAAAAAGAAAATG+GGG - chr4.4:39135781-39135800 None:intergenic 30.0%
TAATTATTCTAATGGTGACC+AGG + chr4.4:39137929-39137948 MS.gene28329:CDS 30.0%
TACTATTCTCGTTAAACTCA+GGG - chr4.4:39138184-39138203 None:intergenic 30.0%
TCAACAAAAATTGATGTACC+TGG + chr4.4:39136856-39136875 MS.gene28329:intron 30.0%
TGCTCATTTAGGAATAAATC+AGG - chr4.4:39138005-39138024 None:intergenic 30.0%
TGTCAAAATTAAGAAGTGGT+TGG + chr4.4:39136339-39136358 MS.gene28329:intron 30.0%
TTATGTGAGGATCATTGAAA+AGG - chr4.4:39137905-39137924 None:intergenic 30.0%
TTCTCTCAATTTCACCAAAA+AGG - chr4.4:39137794-39137813 None:intergenic 30.0%
TTCTCTCTTATATATTGGAC+CGG - chr4.4:39136829-39136848 None:intergenic 30.0%
TTGACTGTTAAATCCAAAGT+AGG + chr4.4:39136313-39136332 MS.gene28329:intron 30.0%
TTTAGGAATAAATCAGGTCT+TGG - chr4.4:39137999-39138018 None:intergenic 30.0%
! AAAGGATGGTGGTTATTATT+AGG - chr4.4:39140152-39140171 None:intergenic 30.0%
! AAGTAACTTTTCCAGCAAAT+AGG - chr4.4:39138675-39138694 None:intergenic 30.0%
! ACTGTGTTTAAAATAATCGC+AGG + chr4.4:39135114-39135133 MS.gene28329:intron 30.0%
! ACTGTTAACTTGACTAGATA+AGG - chr4.4:39140258-39140277 None:intergenic 30.0%
! AGTAACTTTTCCAGCAAATA+GGG - chr4.4:39138674-39138693 None:intergenic 30.0%
! ATGATTCCAAATAGTTTTCC+TGG + chr4.4:39138071-39138090 MS.gene28329:CDS 30.0%
! CATGAAAGAAACAACTTGTT+CGG - chr4.4:39137301-39137320 None:intergenic 30.0%
! CCAAAATCATTTTCACTATC+AGG - chr4.4:39139177-39139196 None:intergenic 30.0%
! CCCAATAATATTTTGTGGAT+CGG + chr4.4:39137717-39137736 MS.gene28329:CDS 30.0%
! CGATGTTTTATAGAAATTGG+TGG + chr4.4:39137213-39137232 MS.gene28329:intron 30.0%
! CGTCGATGTTTTATAGAAAT+TGG + chr4.4:39137210-39137229 MS.gene28329:intron 30.0%
! CTCTGTTTTATACAATTCTC+AGG + chr4.4:39140115-39140134 MS.gene28329:CDS 30.0%
! CTGTGTTTAAAATAATCGCA+GGG + chr4.4:39135115-39135134 MS.gene28329:intron 30.0%
! GATGTACCTGGTTTAAAATT+TGG + chr4.4:39136868-39136887 MS.gene28329:intron 30.0%
! GCAATTATAGCCTTTTTCTA+CGG + chr4.4:39136241-39136260 MS.gene28329:intron 30.0%
! GGAAAACTATTTGGAATCAT+AGG - chr4.4:39138071-39138090 None:intergenic 30.0%
! GTCAACCCAATAATATTTTG+TGG + chr4.4:39137712-39137731 MS.gene28329:CDS 30.0%
! TCTAGCAAACTCAATTTTCA+AGG - chr4.4:39134171-39134190 None:intergenic 30.0%
! TTATTATTAGGTTGCTGGAA+AGG - chr4.4:39140140-39140159 None:intergenic 30.0%
! TTCATCGATTAAGCAAAGTA+CGG - chr4.4:39134427-39134446 None:intergenic 30.0%
! TTTCGTTTTCTGATTTCTGT+AGG + chr4.4:39137362-39137381 MS.gene28329:intron 30.0%
! TTTTTGCATAATTTGATCGG+AGG - chr4.4:39136733-39136752 None:intergenic 30.0%
!! ATATATTGATTTGACGGTAC+AGG - chr4.4:39139405-39139424 None:intergenic 30.0%
!! CCTGATAGTGAAAATGATTT+TGG + chr4.4:39139174-39139193 MS.gene28329:CDS 30.0%
!! GAATGATTCTAAGTCTTGTT+CGG - chr4.4:39135843-39135862 None:intergenic 30.0%
!! GTTTTCAAGGAAAAAGCAAA+TGG - chr4.4:39138974-39138993 None:intergenic 30.0%
!! TGCTGCATATATTGATTTGA+CGG - chr4.4:39139411-39139430 None:intergenic 30.0%
!!! AGGACTAGGATTAGTTTTAA+CGG - chr4.4:39135633-39135652 None:intergenic 30.0%
!!! ATAGTAAAAGGTGCCTTTTT+TGG + chr4.4:39135814-39135833 MS.gene28329:intron 30.0%
!!! CTTGGTTTAATCCAGTTTTT+TGG - chr4.4:39135191-39135210 None:intergenic 30.0%
!!! GGATTCTAGTTCTTAAGTTT+TGG + chr4.4:39136003-39136022 MS.gene28329:intron 30.0%
!!! TCACATTTTAAAATGGACCT+TGG + chr4.4:39137108-39137127 MS.gene28329:intron 30.0%
!!! TCATGTTATTTTTGCTCTTC+TGG + chr4.4:39137316-39137335 MS.gene28329:intron 30.0%
!!! TGTTGCTTTTCAAATTTCTG+CGG + chr4.4:39136064-39136083 MS.gene28329:intron 30.0%
!!! TTACGAAAGAGTACTTTTTG+AGG + chr4.4:39135438-39135457 MS.gene28329:intron 30.0%
AAAAACAACATTTGCGGTAC+AGG - chr4.4:39136130-39136149 None:intergenic 35.0%
AAACTGCATCTTATCTGATG+TGG + chr4.4:39135466-39135485 MS.gene28329:intron 35.0%
AAATACATTGGACATAGTCG+GGG + chr4.4:39135981-39136000 MS.gene28329:intron 35.0%
AAATGCTGGGGGTTATTATT+AGG - chr4.4:39140182-39140201 None:intergenic 35.0%
AAATGTGATGATTGGTGCAT+GGG - chr4.4:39139381-39139400 None:intergenic 35.0%
AATTTGCCTACGAAATTGCT+TGG + chr4.4:39134347-39134366 MS.gene28329:intron 35.0%
AGAAAAAAAGACAGAGCTTG+TGG - chr4.4:39138912-39138931 None:intergenic 35.0%
AGAATTCACAACCTCTAATG+AGG + chr4.4:39137676-39137695 MS.gene28329:intron 35.0%
AGTGTTTAACGCCAAAAAAC+TGG + chr4.4:39135177-39135196 MS.gene28329:intron 35.0%
ATATCATATTCAGCCTGTGA+AGG - chr4.4:39139441-39139460 None:intergenic 35.0%
ATATTCCTAAACTGCTGAGA+TGG - chr4.4:39139834-39139853 None:intergenic 35.0%
ATGCAAGTCTTAACAGTGTA+TGG - chr4.4:39137565-39137584 None:intergenic 35.0%
ATGGATCTGTTCGTTCAATA+CGG + chr4.4:39134026-39134045 MS.gene28329:CDS 35.0%
ATTACTGCTTTGCAGATGTT+TGG - chr4.4:39135073-39135092 None:intergenic 35.0%
ATTAGATTGCTGGAAATGCT+GGG - chr4.4:39140195-39140214 None:intergenic 35.0%
CAAAATGTATACCTGTCTCA+AGG + chr4.4:39139010-39139029 MS.gene28329:intron 35.0%
CAAAGACATGTAAACAGCTT+TGG + chr4.4:39136510-39136529 MS.gene28329:CDS 35.0%
CAATAAGCAACTACTTCATC+CGG - chr4.4:39136941-39136960 None:intergenic 35.0%
CAATTTCAAGGCAAAAGCTT+TGG + chr4.4:39137405-39137424 MS.gene28329:CDS 35.0%
CATGATTATGGGCAATTTCA+AGG + chr4.4:39137393-39137412 MS.gene28329:CDS 35.0%
CATTTCATTGAGGCAATACT+TGG - chr4.4:39135209-39135228 None:intergenic 35.0%
CCAAATAAATCCATTTGTGC+AGG - chr4.4:39138038-39138057 None:intergenic 35.0%
CCAATCTCAATTATGGAAAC+AGG + chr4.4:39139779-39139798 MS.gene28329:CDS 35.0%
CCGTAAATTTGGTAAAGTTG+AGG + chr4.4:39136583-39136602 MS.gene28329:CDS 35.0%
CCTGTTTCCATAATTGAGAT+TGG - chr4.4:39139782-39139801 None:intergenic 35.0%
CCTTACAATAAAAGCAACCA+AGG - chr4.4:39137128-39137147 None:intergenic 35.0%
CGTTGCATTACATCATTAGA+AGG - chr4.4:39135653-39135672 None:intergenic 35.0%
CTAATGATGATCCTTATGCA+GGG + chr4.4:39138378-39138397 MS.gene28329:CDS 35.0%
CTGATACTGATGACTGAAAT+GGG - chr4.4:39140048-39140067 None:intergenic 35.0%
CTGTACAATGTGCATCTAAT+TGG + chr4.4:39137474-39137493 MS.gene28329:intron 35.0%
CTTGTTGGATGTAATGTGTT+GGG + chr4.4:39137530-39137549 MS.gene28329:intron 35.0%
GAAAAAAAGACAGAGCTTGT+GGG - chr4.4:39138911-39138930 None:intergenic 35.0%
GAAACAGGATCATCAAATTG+CGG + chr4.4:39139794-39139813 MS.gene28329:CDS 35.0%
GAAATACATTGGACATAGTC+GGG + chr4.4:39135980-39135999 MS.gene28329:intron 35.0%
GAGAATAGTACACTACACAA+GGG + chr4.4:39138194-39138213 MS.gene28329:CDS 35.0%
GAGCTGTCAAAATTAAGAAG+TGG + chr4.4:39136335-39136354 MS.gene28329:intron 35.0%
GCATGCACCTATTTGTATAT+TGG + chr4.4:39137581-39137600 MS.gene28329:intron 35.0%
GGCAATGACAAAAGATGAAA+AGG - chr4.4:39137511-39137530 None:intergenic 35.0%
GTACTATTCTCGTTAAACTC+AGG - chr4.4:39138185-39138204 None:intergenic 35.0%
GTCGGCAGAAATAAACTTAT+TGG - chr4.4:39138627-39138646 None:intergenic 35.0%
TAAGGGCCAATCACTTATAT+TGG - chr4.4:39138935-39138954 None:intergenic 35.0%
TAGTTGCCATAAATTGCGTA+GGG + chr4.4:39135149-39135168 MS.gene28329:intron 35.0%
TATTAGATTGCTGGAAATGC+TGG - chr4.4:39140196-39140215 None:intergenic 35.0%
TCACACTAATGTCAGAGAAT+CGG - chr4.4:39137254-39137273 None:intergenic 35.0%
TCTCTAAATAATTTCCCGTC+TGG + chr4.4:39135512-39135531 MS.gene28329:intron 35.0%
TCTGATTTCTGTAGGATCAA+GGG + chr4.4:39137370-39137389 MS.gene28329:intron 35.0%
TCTTGTTCGGAAACCAAAAA+AGG - chr4.4:39135830-39135849 None:intergenic 35.0%
TGATACTGATGACTGAAATG+GGG - chr4.4:39140047-39140066 None:intergenic 35.0%
TGTCCAGAATAAGAATCAGA+AGG - chr4.4:39137432-39137451 None:intergenic 35.0%
TGTTTACCCTACGCAATTTA+TGG - chr4.4:39135158-39135177 None:intergenic 35.0%
TTAGTTGCCATAAATTGCGT+AGG + chr4.4:39135148-39135167 MS.gene28329:intron 35.0%
TTCTGATTTCTGTAGGATCA+AGG + chr4.4:39137369-39137388 MS.gene28329:intron 35.0%
! ATCTTTTGTCATTGCCTTGT+TGG + chr4.4:39137515-39137534 MS.gene28329:intron 35.0%
! CAATAGAATTATTGGGTTGC+TGG - chr4.4:39140235-39140254 None:intergenic 35.0%
! CCAAAAATGACGTTATTTCC+AGG + chr4.4:39136487-39136506 MS.gene28329:intron 35.0%
! CCTGCACAAATGGATTTATT+TGG + chr4.4:39138035-39138054 MS.gene28329:CDS 35.0%
! CTGTATTTGGAGTAGAAGAT+TGG - chr4.4:39140438-39140457 None:intergenic 35.0%
! GCTATGTAAGACAGTTTTCA+AGG - chr4.4:39138987-39139006 None:intergenic 35.0%
! GTTACATTTTACTGGTAGTC+TGG - chr4.4:39135899-39135918 None:intergenic 35.0%
! GTTTAAAATAATCGCAGGGA+CGG + chr4.4:39135119-39135138 MS.gene28329:intron 35.0%
! TCTGGTCCAAATTTTAAACC+AGG - chr4.4:39136877-39136896 None:intergenic 35.0%
! TGAAGTGTCATGATTGGATT+GGG + chr4.4:39134508-39134527 MS.gene28329:intron 35.0%
!! AAATTGGTGGATTCTGTGTT+AGG + chr4.4:39137226-39137245 MS.gene28329:intron 35.0%
!! AATTTTGACAGCTCCTACTT+TGG - chr4.4:39136329-39136348 None:intergenic 35.0%
!! CCTGGAAATAACGTCATTTT+TGG - chr4.4:39136490-39136509 None:intergenic 35.0%
!! GAAAATTGAGTTTGCTAGAC+CGG + chr4.4:39134172-39134191 MS.gene28329:CDS 35.0%
!! GTCAGGTTGCTATTTAGATT+TGG - chr4.4:39135742-39135761 None:intergenic 35.0%
!! TCAACAAAAGTTGATGCATC+TGG - chr4.4:39136895-39136914 None:intergenic 35.0%
!! TGAGATTGGTTTCCATCATT+AGG - chr4.4:39139768-39139787 None:intergenic 35.0%
!! TTACGCGTTTGATAGTGTAA+AGG - chr4.4:39136167-39136186 None:intergenic 35.0%
!! TTGCTTTTCAAATTTCTGCG+GGG + chr4.4:39136066-39136085 MS.gene28329:intron 35.0%
!!! ACTAGGATTAGTTTTAACGG+TGG - chr4.4:39135630-39135649 None:intergenic 35.0%
!!! CCTTGGTTGCTTTTATTGTA+AGG + chr4.4:39137125-39137144 MS.gene28329:intron 35.0%
!!! GTTGCTTTTCAAATTTCTGC+GGG + chr4.4:39136065-39136084 MS.gene28329:intron 35.0%
!!! TAGTTTTAACGGTGGTAACA+GGG - chr4.4:39135622-39135641 None:intergenic 35.0%
!!! TGATTTGGTCAGTAGTGTTT+TGG + chr4.4:39137154-39137173 MS.gene28329:intron 35.0%
!!! TTAGTTTTAACGGTGGTAAC+AGG - chr4.4:39135623-39135642 None:intergenic 35.0%
AAAACAGAGACATCACTTCC+TGG - chr4.4:39140104-39140123 None:intergenic 40.0%
AAACAAGTATACCCACCTAC+AGG + chr4.4:39139537-39139556 MS.gene28329:CDS 40.0%
AAACTCCTTGTACATGCGAT+TGG + chr4.4:39134454-39134473 MS.gene28329:intron 40.0%
AAACTGCTGAGATGGATGAA+TGG - chr4.4:39139826-39139845 None:intergenic 40.0%
AACGAACAGATCCATCAGAT+CGG - chr4.4:39134021-39134040 None:intergenic 40.0%
AAGTCTTCCTTTGTTACAGC+TGG - chr4.4:39136551-39136570 None:intergenic 40.0%
AATACATTGGACATAGTCGG+GGG + chr4.4:39135982-39136001 MS.gene28329:intron 40.0%
AATACTCAGAAAGGCTTTCC+AGG + chr4.4:39140083-39140102 MS.gene28329:CDS 40.0%
ACAAACCAATCGCATGTACA+AGG - chr4.4:39134462-39134481 None:intergenic 40.0%
ACATCTGTCAGGAAATCAGA+AGG - chr4.4:39139288-39139307 None:intergenic 40.0%
AGATGTAGTACAGTACCAGA+CGG - chr4.4:39135530-39135549 None:intergenic 40.0%
AGCTGTAACAAAGGAAGACT+TGG + chr4.4:39136550-39136569 MS.gene28329:CDS 40.0%
AGTCTTCCTTTGTTACAGCT+GGG - chr4.4:39136550-39136569 None:intergenic 40.0%
ATAAATATCCCGACGTCTCA+CGG + chr4.4:39136965-39136984 MS.gene28329:intron 40.0%
ATACTGATGACTGAAATGGG+GGG - chr4.4:39140045-39140064 None:intergenic 40.0%
ATCTGATGTGGATACAACCA+GGG + chr4.4:39135478-39135497 MS.gene28329:intron 40.0%
ATGAATGGAAAACGTATCGG+TGG + chr4.4:39136686-39136705 MS.gene28329:CDS 40.0%
ATTCACAACCTCTAATGAGG+AGG + chr4.4:39137679-39137698 MS.gene28329:CDS 40.0%
CAAAAAGGATCATGGCATTG+TGG - chr4.4:39137779-39137798 None:intergenic 40.0%
CAAATGTGATGATTGGTGCA+TGG - chr4.4:39139382-39139401 None:intergenic 40.0%
CCAACACATTACATCCAACA+AGG - chr4.4:39137532-39137551 None:intergenic 40.0%
CCATTTCAGTCATCAGTATC+AGG + chr4.4:39140046-39140065 MS.gene28329:CDS 40.0%
CCTAATGATGATCCTTATGC+AGG + chr4.4:39138377-39138396 MS.gene28329:CDS 40.0%
CCTGATACTGATGACTGAAA+TGG - chr4.4:39140049-39140068 None:intergenic 40.0%
CCTGCATAAGGATCATCATT+AGG - chr4.4:39138380-39138399 None:intergenic 40.0%
CCTTGTTGGATGTAATGTGT+TGG + chr4.4:39137529-39137548 MS.gene28329:intron 40.0%
CGAGAATAGTACACTACACA+AGG + chr4.4:39138193-39138212 MS.gene28329:CDS 40.0%
CTGTCCAACCTGATCATATA+TGG + chr4.4:39138453-39138472 MS.gene28329:CDS 40.0%
GAGAAGAAAATGCAGAGCAT+AGG + chr4.4:39135357-39135376 MS.gene28329:intron 40.0%
GATACTGATGACTGAAATGG+GGG - chr4.4:39140046-39140065 None:intergenic 40.0%
GCTAAAGTTGCAATAAGCTC+AGG - chr4.4:39139648-39139667 None:intergenic 40.0%
GGAAAGCCTTTCTGAGTATT+GGG - chr4.4:39140083-39140102 None:intergenic 40.0%
GGGGGTTATTATTAGATTGC+TGG - chr4.4:39140205-39140224 None:intergenic 40.0%
GGGTCAAATGCAAAAGAAGT+CGG - chr4.4:39138645-39138664 None:intergenic 40.0%
GTACAGGCAAATGTGATGAT+TGG - chr4.4:39139389-39139408 None:intergenic 40.0%
GTCGATATGGATGCTCATTT+AGG - chr4.4:39138016-39138035 None:intergenic 40.0%
TAGAATCCTCGTGCAACATT+CGG - chr4.4:39139506-39139525 None:intergenic 40.0%
TAGAGATAAATGTAGTCCCC+TGG - chr4.4:39135498-39135517 None:intergenic 40.0%
TATCTGATGTGGATACAACC+AGG + chr4.4:39135477-39135496 MS.gene28329:intron 40.0%
TCCAGATAACATGCGTTTCT+GGG + chr4.4:39135582-39135601 MS.gene28329:intron 40.0%
TCTAAACAAGACCTTGAGAC+AGG - chr4.4:39139024-39139043 None:intergenic 40.0%
TCTCTTATATATTGGACCGG+AGG - chr4.4:39136826-39136845 None:intergenic 40.0%
TCTTATCAGCCTCCAATTCT+GGG - chr4.4:39140382-39140401 None:intergenic 40.0%
TGACTTTCAGAACATCTGTC+AGG - chr4.4:39139299-39139318 None:intergenic 40.0%
TGATATGAATCCTGCAAAGG+AGG + chr4.4:39139455-39139474 MS.gene28329:CDS 40.0%
TGCTCATCGATCTGAACATT+GGG - chr4.4:39137750-39137769 None:intergenic 40.0%
TGGAAAGCCTTTCTGAGTAT+TGG - chr4.4:39140084-39140103 None:intergenic 40.0%
TTAGATTGCTGGAAATGCTG+GGG - chr4.4:39140194-39140213 None:intergenic 40.0%
TTATAAGTTCGGGGTGTGTT+TGG - chr4.4:39134587-39134606 None:intergenic 40.0%
TTATTGCAGTCCTGAAGTTG+TGG + chr4.4:39139071-39139090 MS.gene28329:intron 40.0%
TTCATCCATCTCAGCAGTTT+AGG + chr4.4:39139826-39139845 MS.gene28329:CDS 40.0%
TTCATGCCAAGCAATTTCGT+AGG - chr4.4:39134356-39134375 None:intergenic 40.0%
TTCCAGATAACATGCGTTTC+TGG + chr4.4:39135581-39135600 MS.gene28329:intron 40.0%
TTCTTATCAGCCTCCAATTC+TGG - chr4.4:39140383-39140402 None:intergenic 40.0%
TTGCCAAATGGTGGTATTGT+TGG + chr4.4:39138098-39138117 MS.gene28329:CDS 40.0%
TTGCTCATCGATCTGAACAT+TGG - chr4.4:39137751-39137770 None:intergenic 40.0%
TTGTACAGTATTCTCACCAG+TGG - chr4.4:39137462-39137481 None:intergenic 40.0%
TTTCCTGGACAATTGCCAAA+TGG + chr4.4:39138086-39138105 MS.gene28329:CDS 40.0%
TTTGTGACACCTACTCAAAG+TGG + chr4.4:39140005-39140024 MS.gene28329:CDS 40.0%
! AAAACTTGTTCCTCCTTTGC+AGG - chr4.4:39139468-39139487 None:intergenic 40.0%
! ACAACTTGTTCGGTAATCCT+CGG - chr4.4:39137291-39137310 None:intergenic 40.0%
! ACTTTTCCAGCAAATAGGGA+TGG - chr4.4:39138670-39138689 None:intergenic 40.0%
! AGGATCAAGGGCATGATTAT+GGG + chr4.4:39137382-39137401 MS.gene28329:intron 40.0%
! CACAATGCCATGATCCTTTT+TGG + chr4.4:39137777-39137796 MS.gene28329:CDS 40.0%
! CTTCAGGGATTCAATTTTCG+TGG + chr4.4:39134140-39134159 MS.gene28329:CDS 40.0%
! GAAAGCCTTTCTGAGTATTG+GGG - chr4.4:39140082-39140101 None:intergenic 40.0%
! GAAGCTGACTTCCGTAAATT+TGG + chr4.4:39136572-39136591 MS.gene28329:CDS 40.0%
! GAATTATTGGGTTGCTGGAA+AGG - chr4.4:39140230-39140249 None:intergenic 40.0%
! GCATGTACAAGGAGTTTTCA+AGG - chr4.4:39134451-39134470 None:intergenic 40.0%
! GCTTTTATCCTGGGAGTAAT+GGG + chr4.4:39137973-39137992 MS.gene28329:CDS 40.0%
! GGCTGATGTTTTCTTTATGC+TGG + chr4.4:39137602-39137621 MS.gene28329:intron 40.0%
! GGTGGTTATTATTAGGTTGC+TGG - chr4.4:39140145-39140164 None:intergenic 40.0%
! GTGAAAGTTGCTAGTCTAAC+CGG + chr4.4:39134711-39134730 MS.gene28329:intron 40.0%
! GTGAAGTGTCATGATTGGAT+TGG + chr4.4:39134507-39134526 MS.gene28329:intron 40.0%
! GTTTGAGTTTACTTGGTCTG+CGG - chr4.4:39140315-39140334 None:intergenic 40.0%
! GTTTGGTGAAGTGTCATGAT+TGG + chr4.4:39134502-39134521 MS.gene28329:intron 40.0%
! TAGGATCAAGGGCATGATTA+TGG + chr4.4:39137381-39137400 MS.gene28329:intron 40.0%
! TATTAGGTTGCTGGAAAGGA+TGG - chr4.4:39140166-39140185 None:intergenic 40.0%
! TGAATGGAAAACGTATCGGT+GGG + chr4.4:39136687-39136706 MS.gene28329:CDS 40.0%
! TGCTTTTCAAATTTCTGCGG+GGG + chr4.4:39136067-39136086 MS.gene28329:intron 40.0%
!! AAAGCCTTTCTGAGTATTGG+GGG - chr4.4:39140081-39140100 None:intergenic 40.0%
!! ACAGATGTTCTGAAAGTCAC+CGG + chr4.4:39139300-39139319 MS.gene28329:CDS 40.0%
!! ACATGTAAACAGCTTTGGGT+AGG + chr4.4:39136515-39136534 MS.gene28329:CDS 40.0%
!! GTACATGCGATTGGTTTGTA+TGG + chr4.4:39134463-39134482 MS.gene28329:intron 40.0%
!! TGTCTCAAGGTCTTGTTTAG+AGG + chr4.4:39139023-39139042 MS.gene28329:intron 40.0%
!! TTAGAAGTGTTGATGAAGCC+CGG + chr4.4:39137853-39137872 MS.gene28329:CDS 40.0%
AAAGGCAGGATGTTGTTGGA+TGG - chr4.4:39140342-39140361 None:intergenic 45.0%
AAATGGAGGCTTCACAGTTG+AGG - chr4.4:39139733-39139752 None:intergenic 45.0%
AACCCATAGGTTGTTCGATG+GGG - chr4.4:39133970-39133989 None:intergenic 45.0%
AACCCCATCGAACAACCTAT+GGG + chr4.4:39133965-39133984 MS.gene28329:CDS 45.0%
AAGGCAGGATGTTGTTGGAT+GGG - chr4.4:39140341-39140360 None:intergenic 45.0%
AAGTATACCCACCTACAGGT+GGG + chr4.4:39139541-39139560 MS.gene28329:CDS 45.0%
ACAACCTCTAATGAGGAGGA+AGG + chr4.4:39137683-39137702 MS.gene28329:CDS 45.0%
ACAGATTCAGGACCACCATT+AGG - chr4.4:39138152-39138171 None:intergenic 45.0%
ACCATATAGACGTTCAGGTC+CGG - chr4.4:39139322-39139341 None:intergenic 45.0%
ACGACACCATATAGACGTTC+AGG - chr4.4:39139327-39139346 None:intergenic 45.0%
ACTGAATTCCTACGCTACCT+TGG + chr4.4:39139204-39139223 MS.gene28329:CDS 45.0%
AGATCGGAATCTGTTACGTC+CGG - chr4.4:39134005-39134024 None:intergenic 45.0%
AGCAAACACAAGGAGGACAT+GGG + chr4.4:39140462-39140481 MS.gene28329:CDS 45.0%
ATACAGCAGCAGCAAACACA+AGG + chr4.4:39140452-39140471 MS.gene28329:CDS 45.0%
ATCCAACAACATCCTGCCTT+TGG + chr4.4:39140341-39140360 MS.gene28329:CDS 45.0%
ATGATGATCCTTATGCAGGG+AGG + chr4.4:39138381-39138400 MS.gene28329:CDS 45.0%
CAACCCATAGGTTGTTCGAT+GGG - chr4.4:39133971-39133990 None:intergenic 45.0%
CAACCTCTAATGAGGAGGAA+GGG + chr4.4:39137684-39137703 MS.gene28329:CDS 45.0%
CAACCTGATCATATATGGCG+CGG + chr4.4:39138458-39138477 MS.gene28329:CDS 45.0%
CAAGAGATTCTAAGCGGTCA+AGG + chr4.4:39138339-39138358 MS.gene28329:CDS 45.0%
CAGCAAACTGCAATGTTGAC+TGG - chr4.4:39140415-39140434 None:intergenic 45.0%
CATTAGCCCAGCTGTAACAA+AGG + chr4.4:39136541-39136560 MS.gene28329:CDS 45.0%
CGTAACAGATTCCGATCTGA+TGG + chr4.4:39134007-39134026 MS.gene28329:CDS 45.0%
CTCATCGATCTGAACATTGG+GGG - chr4.4:39137748-39137767 None:intergenic 45.0%
CTTATCAGCCTCCAATTCTG+GGG - chr4.4:39140381-39140400 None:intergenic 45.0%
CTTGACCGCTTAGAATCTCT+TGG - chr4.4:39138341-39138360 None:intergenic 45.0%
GACACGGTTTCAATATGCAG+TGG - chr4.4:39134992-39135011 None:intergenic 45.0%
GACTTAGCACCATCAATAGC+AGG - chr4.4:39139699-39139718 None:intergenic 45.0%
GATGTAGTACAGTACCAGAC+GGG - chr4.4:39135529-39135548 None:intergenic 45.0%
GCGCAAAAGTGAGAACAAAC+CGG - chr4.4:39134194-39134213 None:intergenic 45.0%
GCTCATCGATCTGAACATTG+GGG - chr4.4:39137749-39137768 None:intergenic 45.0%
GCTGTTTACATGTCTTTGCC+TGG - chr4.4:39136508-39136527 None:intergenic 45.0%
GGACCAACAATACCACCATT+TGG - chr4.4:39138104-39138123 None:intergenic 45.0%
GGCCCATTTCCAAGAACTAA+GGG - chr4.4:39138952-39138971 None:intergenic 45.0%
GGGCCTTCTGATTCTTATTC+TGG + chr4.4:39137426-39137445 MS.gene28329:CDS 45.0%
GGTGGGTATACTTGTTTAGC+AGG - chr4.4:39139534-39139553 None:intergenic 45.0%
GTCTGGTACTGTACTACATC+TGG + chr4.4:39135529-39135548 MS.gene28329:intron 45.0%
GTGCAAAAGAGGGTCTTCAA+GGG + chr4.4:39137877-39137896 MS.gene28329:CDS 45.0%
TACTCCCAGGATAAAAGCCA+GGG - chr4.4:39137971-39137990 None:intergenic 45.0%
TAGATTGCTGGAAATGCTGG+GGG - chr4.4:39140193-39140212 None:intergenic 45.0%
TCATATTCAGCCTGTGAAGG+AGG - chr4.4:39139438-39139457 None:intergenic 45.0%
TCATCGATCTGAACATTGGG+GGG - chr4.4:39137747-39137766 None:intergenic 45.0%
TCCATATCGACCTGCACAAA+TGG + chr4.4:39138025-39138044 MS.gene28329:CDS 45.0%
TCCATTTGTGCAGGTCGATA+TGG - chr4.4:39138029-39138048 None:intergenic 45.0%
TCCCAGAAACGCATGTTATC+TGG - chr4.4:39135586-39135605 None:intergenic 45.0%
TCTAAGCGGTCAAGGATAGA+TGG + chr4.4:39138347-39138366 MS.gene28329:CDS 45.0%
TCTAATGGTGACCAGGTACA+CGG + chr4.4:39137936-39137955 MS.gene28329:CDS 45.0%
TCTGATGTGGATACAACCAG+GGG + chr4.4:39135479-39135498 MS.gene28329:intron 45.0%
TCTGCGGTATATTGCATGAC+AGG - chr4.4:39140299-39140318 None:intergenic 45.0%
TCTGTCAGGAAATCAGAAGG+AGG - chr4.4:39139285-39139304 None:intergenic 45.0%
TGATGATCCTTATGCAGGGA+GGG + chr4.4:39138382-39138401 MS.gene28329:CDS 45.0%
TTACAACCGAATGTTGCACG+AGG + chr4.4:39139497-39139516 MS.gene28329:CDS 45.0%
TTACTCCCAGGATAAAAGCC+AGG - chr4.4:39137972-39137991 None:intergenic 45.0%
TTATCAGCCTCCAATTCTGG+GGG - chr4.4:39140380-39140399 None:intergenic 45.0%
TTCCAGCAAATAGGGATGGA+GGG - chr4.4:39138666-39138685 None:intergenic 45.0%
TTCTGGACAAAAAAGGCCAC+TGG + chr4.4:39137443-39137462 MS.gene28329:CDS 45.0%
TTGATCGGAGGAAGTCAACA+CGG - chr4.4:39136721-39136740 None:intergenic 45.0%
TTGCTTTCTTCTCCTGTACC+GGG + chr4.4:39138254-39138273 MS.gene28329:CDS 45.0%
TTGGTCCAAACATACCAGTG+CGG + chr4.4:39138117-39138136 MS.gene28329:CDS 45.0%
TTTCCAGCAAATAGGGATGG+AGG - chr4.4:39138667-39138686 None:intergenic 45.0%
! AACTTGTTCGGTAATCCTCG+GGG - chr4.4:39137289-39137308 None:intergenic 45.0%
! AAGTTGTGGATTGCTCAGCT+AGG + chr4.4:39139085-39139104 MS.gene28329:CDS 45.0%
! AGTGATTGGCCCTTAGTTCT+TGG + chr4.4:39138940-39138959 MS.gene28329:intron 45.0%
! CAACTTGTTCGGTAATCCTC+GGG - chr4.4:39137290-39137309 None:intergenic 45.0%
! CTCTAAACACTGCTGCTTCT+GGG + chr4.4:39139598-39139617 MS.gene28329:CDS 45.0%
! CTTGGTGCAAAAAATCGTGC+TGG + chr4.4:39139222-39139241 MS.gene28329:CDS 45.0%
! GAATGGAAAACGTATCGGTG+GGG + chr4.4:39136688-39136707 MS.gene28329:CDS 45.0%
! GCAATGTTGACTGGTATCTC+TGG - chr4.4:39140406-39140425 None:intergenic 45.0%
! GCAGTGTTTAGAGCATAGTC+CGG - chr4.4:39139591-39139610 None:intergenic 45.0%
! GGCCCTTAGTTCTTGGAAAT+GGG + chr4.4:39138947-39138966 MS.gene28329:intron 45.0%
! GGCTTTTATCCTGGGAGTAA+TGG + chr4.4:39137972-39137991 MS.gene28329:CDS 45.0%
! GGGGGTTATTATTAGGTTGC+TGG - chr4.4:39140175-39140194 None:intergenic 45.0%
! GTGTTTGCTGCTGCTGTATT+TGG - chr4.4:39140451-39140470 None:intergenic 45.0%
! GTTGCTTTCTTCTCCTGTAC+CGG + chr4.4:39138253-39138272 MS.gene28329:CDS 45.0%
! TCAATTTGGTAACTGGGGTG+TGG + chr4.4:39137002-39137021 MS.gene28329:intron 45.0%
! TGGCCCTTAGTTCTTGGAAA+TGG + chr4.4:39138946-39138965 MS.gene28329:intron 45.0%
! TGGGAGGGTTTGAGTTTACT+TGG - chr4.4:39140322-39140341 None:intergenic 45.0%
! TTTCCATCATTAGGTGCCAC+AGG - chr4.4:39139759-39139778 None:intergenic 45.0%
! TTTTTGCACCAAGGTAGCGT+AGG - chr4.4:39139215-39139234 None:intergenic 45.0%
!! AAACAACTCCTTGCTGTTGC+TGG - chr4.4:39139965-39139984 None:intergenic 45.0%
!! AAGCCTTTCTGAGTATTGGG+GGG - chr4.4:39140080-39140099 None:intergenic 45.0%
!! ACTACCCTGGCTTTTATCCT+GGG + chr4.4:39137964-39137983 MS.gene28329:CDS 45.0%
!! GCTATTGATGGTGCTAAGTC+AGG + chr4.4:39139699-39139718 MS.gene28329:CDS 45.0%
!! GGTCCTGAATCTGTTGTTTC+TGG + chr4.4:39138158-39138177 MS.gene28329:CDS 45.0%
!! TGTAAACAGCTTTGGGTAGG+TGG + chr4.4:39136518-39136537 MS.gene28329:CDS 45.0%
!!! CAGCACGATTTTTTGCACCA+AGG - chr4.4:39139224-39139243 None:intergenic 45.0%
!!! TCCCTGAAGAGCGTTTTTAG+CGG - chr4.4:39134129-39134148 None:intergenic 45.0%
!!! CTTTTTTTTTTTTTTTTTTT+TGG - chr4.4:39135921-39135940 None:intergenic 5.0%
AACGTTTGAGCAGTGTGGCT+AGG - chr4.4:39139906-39139925 None:intergenic 50.0%
AAGATCGTCCTCTGGTGCAT+GGG + chr4.4:39138292-39138311 MS.gene28329:CDS 50.0%
AAGTACATCCCATGCACCAG+AGG - chr4.4:39138303-39138322 None:intergenic 50.0%
ACCGGACCTGAACGTCTATA+TGG + chr4.4:39139318-39139337 MS.gene28329:CDS 50.0%
ACGCATCTAGCACGACAAAC+AGG - chr4.4:39138506-39138525 None:intergenic 50.0%
AGCCGCTAAAAACGCTCTTC+AGG + chr4.4:39134124-39134143 MS.gene28329:CDS 50.0%
AGTCCGCGCCATATATGATC+AGG - chr4.4:39138464-39138483 None:intergenic 50.0%
CAACCCCATCGAACAACCTA+TGG + chr4.4:39133964-39133983 MS.gene28329:CDS 50.0%
CAAGTATACCCACCTACAGG+TGG + chr4.4:39139540-39139559 MS.gene28329:CDS 50.0%
CACACTGCTCAAACGTTCTC+TGG + chr4.4:39139909-39139928 MS.gene28329:CDS 50.0%
CAGAGAACGTTTGAGCAGTG+TGG - chr4.4:39139911-39139930 None:intergenic 50.0%
CAGCAAACACAAGGAGGACA+TGG + chr4.4:39140461-39140480 MS.gene28329:CDS 50.0%
CAGGATGTTGTTGGATGGGA+GGG - chr4.4:39140337-39140356 None:intergenic 50.0%
CCACCATTTGGCAATTGTCC+AGG - chr4.4:39138092-39138111 None:intergenic 50.0%
CCTGGACAATTGCCAAATGG+TGG + chr4.4:39138089-39138108 MS.gene28329:CDS 50.0%
CGCGCCATATATGATCAGGT+TGG - chr4.4:39138460-39138479 None:intergenic 50.0%
CGCGGACTTATTGCAAAAGG+AGG + chr4.4:39138476-39138495 MS.gene28329:CDS 50.0%
CGGTGGTAACAGGGATAGTT+TGG - chr4.4:39135613-39135632 None:intergenic 50.0%
CGTGCAAAAGAGGGTCTTCA+AGG + chr4.4:39137876-39137895 MS.gene28329:CDS 50.0%
CTAATGAGGAGGAAGGGTGA+CGG + chr4.4:39137690-39137709 MS.gene28329:CDS 50.0%
CTCCAAAGGCAGGATGTTGT+TGG - chr4.4:39140346-39140365 None:intergenic 50.0%
GAAGAAAGCAACCCTTGTGC+AGG - chr4.4:39138245-39138264 None:intergenic 50.0%
GACACCTACTCAAAGTGGAC+AGG + chr4.4:39140010-39140029 MS.gene28329:CDS 50.0%
GATGATCCTTATGCAGGGAG+GGG + chr4.4:39138383-39138402 MS.gene28329:CDS 50.0%
GCAACCCATAGGTTGTTCGA+TGG - chr4.4:39133972-39133991 None:intergenic 50.0%
GCCGCTAAAAACGCTCTTCA+GGG + chr4.4:39134125-39134144 MS.gene28329:CDS 50.0%
GCGATAGATTCGCAACCCAT+AGG - chr4.4:39133983-39134002 None:intergenic 50.0%
GCTACCTGTCCACTTTGAGT+AGG - chr4.4:39140017-39140036 None:intergenic 50.0%
GCTGAGCAATCCACAACTTC+AGG - chr4.4:39139084-39139103 None:intergenic 50.0%
GGACCACCATTAGGACCAAA+AGG - chr4.4:39138143-39138162 None:intergenic 50.0%
GGGCCAGAAACAACAGATTC+AGG - chr4.4:39138164-39138183 None:intergenic 50.0%
GGGCCCATTTCCAAGAACTA+AGG - chr4.4:39138953-39138972 None:intergenic 50.0%
GTTCCCCCCAATACTCAGAA+AGG + chr4.4:39140074-39140093 MS.gene28329:CDS 50.0%
TAGGTTGCTGGAAAGGATGG+TGG - chr4.4:39140163-39140182 None:intergenic 50.0%
TATCAGCCTCCAATTCTGGG+GGG - chr4.4:39140379-39140398 None:intergenic 50.0%
TCACCCTTCCTCCTCATTAG+AGG - chr4.4:39137690-39137709 None:intergenic 50.0%
TCAGCAAGCACGAGGATTAC+AGG + chr4.4:39138416-39138435 MS.gene28329:CDS 50.0%
TCCAGCAAATAGGGATGGAG+GGG - chr4.4:39138665-39138684 None:intergenic 50.0%
TGACTATTCCACTAACCCCG+AGG + chr4.4:39137271-39137290 MS.gene28329:intron 50.0%
TGGCGCGGACTTATTGCAAA+AGG + chr4.4:39138473-39138492 MS.gene28329:CDS 50.0%
TGTTTGGCAAGTTGCACGTC+AGG - chr4.4:39135057-39135076 None:intergenic 50.0%
! AAAGGCCGCACTGGTATGTT+TGG - chr4.4:39138125-39138144 None:intergenic 50.0%
! AACATACCAGTGCGGCCTTT+TGG + chr4.4:39138125-39138144 MS.gene28329:CDS 50.0%
! AAGTTTGCACCAGTACCGAG+TGG + chr4.4:39139351-39139370 MS.gene28329:CDS 50.0%
! ATGGGTTGCGAATCTATCGC+CGG + chr4.4:39133983-39134002 MS.gene28329:CDS 50.0%
! ATTGGGTTGCTGGAAAGGCT+GGG - chr4.4:39140225-39140244 None:intergenic 50.0%
! CACGAAAGCGTAATTGCGAG+AGG - chr4.4:39134078-39134097 None:intergenic 50.0%
! GCTCTAAACACTGCTGCTTC+TGG + chr4.4:39139597-39139616 MS.gene28329:CDS 50.0%
! TATTGGGTTGCTGGAAAGGC+TGG - chr4.4:39140226-39140245 None:intergenic 50.0%
! TGTGGATTGCTCAGCTAGGA+CGG + chr4.4:39139089-39139108 MS.gene28329:CDS 50.0%
! TTAGGTGCCACAGGAGGAAA+TGG - chr4.4:39139750-39139769 None:intergenic 50.0%
!! CAACATCCTGCCTTTGGAGT+TGG + chr4.4:39140347-39140366 MS.gene28329:CDS 50.0%
!! GACTACCCTGGCTTTTATCC+TGG + chr4.4:39137963-39137982 MS.gene28329:CDS 50.0%
AACCCTTGTGCAGGAGGAGA+TGG - chr4.4:39138236-39138255 None:intergenic 55.0%
AAGAAGGCCCACCTGTAGGT+GGG - chr4.4:39139551-39139570 None:intergenic 55.0%
ACCCCTCCATCCCTATTTGC+TGG + chr4.4:39138661-39138680 MS.gene28329:intron 55.0%
ACTGAAGAAGGCCCACCTGT+AGG - chr4.4:39139555-39139574 None:intergenic 55.0%
AGATGCGTCCCTGTAGGGAA+AGG + chr4.4:39138518-39138537 MS.gene28329:CDS 55.0%
AGGATACCCCTCCCTGCATA+AGG - chr4.4:39138392-39138411 None:intergenic 55.0%
CAAGATCGTCCTCTGGTGCA+TGG + chr4.4:39138291-39138310 MS.gene28329:CDS 55.0%
CAGCAGCAGCAAACACAAGG+AGG + chr4.4:39140455-39140474 MS.gene28329:CDS 55.0%
CCTCCTGTGGCACCTAATGA+TGG + chr4.4:39139753-39139772 MS.gene28329:CDS 55.0%
CCTTGACCAACTCCAAAGGC+AGG - chr4.4:39140356-39140375 None:intergenic 55.0%
CTTCCTGCAAGATCGTCCTC+TGG + chr4.4:39138284-39138303 MS.gene28329:CDS 55.0%
GAAAGCAACCCTTGTGCAGG+AGG - chr4.4:39138242-39138261 None:intergenic 55.0%
GAAGCCTCCATTTCCTCCTG+TGG + chr4.4:39139740-39139759 MS.gene28329:CDS 55.0%
GATGCGTCCCTGTAGGGAAA+GGG + chr4.4:39138519-39138538 MS.gene28329:CDS 55.0%
GATTCATCCGAGTCTCGCGT+TGG - chr4.4:39133942-39133961 None:intergenic 55.0%
GCAAGCACGAGGATTACAGG+TGG + chr4.4:39138419-39138438 MS.gene28329:CDS 55.0%
GCAGGATGTTGTTGGATGGG+AGG - chr4.4:39140338-39140357 None:intergenic 55.0%
GCTGCAGGCTGAACTGAAGA+AGG - chr4.4:39139567-39139586 None:intergenic 55.0%
GCTGTTAGCCAGCAACAGCA+AGG + chr4.4:39139954-39139973 MS.gene28329:CDS 55.0%
GGTAGTCTTTGCCGTGTACC+TGG - chr4.4:39137950-39137969 None:intergenic 55.0%
GTACACGGCAAAGACTACCC+TGG + chr4.4:39137951-39137970 MS.gene28329:CDS 55.0%
GTCCCTGTAGGGAAAGGGAT+CGG + chr4.4:39138524-39138543 MS.gene28329:CDS 55.0%
GTGCTAGATGCGTCCCTGTA+GGG + chr4.4:39138513-39138532 MS.gene28329:CDS 55.0%
TAGATCCTGCCGTGAGACGT+CGG - chr4.4:39136977-39136996 None:intergenic 55.0%
TCCCGATCCCTTTCCCTACA+GGG - chr4.4:39138529-39138548 None:intergenic 55.0%
TCCCTGTAGGGAAAGGGATC+GGG + chr4.4:39138525-39138544 MS.gene28329:CDS 55.0%
TCCTTGGTTCAGCAAGCACG+AGG + chr4.4:39138408-39138427 MS.gene28329:CDS 55.0%
TCGGTAATCCTCGGGGTTAG+TGG - chr4.4:39137282-39137301 None:intergenic 55.0%
TGCATGACAGGCTGATGCTG+AGG - chr4.4:39140287-39140306 None:intergenic 55.0%
TTAGGACCAAAAGGCCGCAC+TGG - chr4.4:39138134-39138153 None:intergenic 55.0%
TTCAGTTCAGCCTGCAGCTC+CGG + chr4.4:39139569-39139588 MS.gene28329:CDS 55.0%
TTGCTCAGCTAGGACGGGAT+TGG + chr4.4:39139095-39139114 MS.gene28329:CDS 55.0%
! AAGACCCTCTTTTGCACGCC+GGG - chr4.4:39137874-39137893 None:intergenic 55.0%
! CCATCATTAGGTGCCACAGG+AGG - chr4.4:39139756-39139775 None:intergenic 55.0%
! CGGCCTTTTGGTCCTAATGG+TGG + chr4.4:39138137-39138156 MS.gene28329:CDS 55.0%
! GAAGACCCTCTTTTGCACGC+CGG - chr4.4:39137875-39137894 None:intergenic 55.0%
! GATGGTGCTAAGTCAGGTGC+AGG + chr4.4:39139705-39139724 MS.gene28329:CDS 55.0%
! GTGCGGCCTTTTGGTCCTAA+TGG + chr4.4:39138134-39138153 MS.gene28329:CDS 55.0%
! GTGGATTGCTCAGCTAGGAC+GGG + chr4.4:39139090-39139109 MS.gene28329:CDS 55.0%
! TCCTCGTGCTTGCTGAACCA+AGG - chr4.4:39138412-39138431 None:intergenic 55.0%
! TTGGGTTGCTGGAAAGGCTG+GGG - chr4.4:39140224-39140243 None:intergenic 55.0%
!! CCTGCCTTTGGAGTTGGTCA+AGG + chr4.4:39140353-39140372 MS.gene28329:CDS 55.0%
!! TATGCAGGGAGGGGTATCCT+TGG + chr4.4:39138392-39138411 MS.gene28329:CDS 55.0%
ACACAAGGAGGACATGGGCC+AGG + chr4.4:39140467-39140486 MS.gene28329:CDS 60.0%
AGAGCATAGTCCGGAGCTGC+AGG - chr4.4:39139582-39139601 None:intergenic 60.0%
AGATCCTGCCGTGAGACGTC+GGG - chr4.4:39136976-39136995 None:intergenic 60.0%
AGCAGGCGACTGCGCATTTG+TGG - chr4.4:39139682-39139701 None:intergenic 60.0%
ATATCCCGACGTCTCACGGC+AGG + chr4.4:39136969-39136988 MS.gene28329:intron 60.0%
ATGGGCACACCACTCGGTAC+TGG - chr4.4:39139363-39139382 None:intergenic 60.0%
CGTGCTAGATGCGTCCCTGT+AGG + chr4.4:39138512-39138531 MS.gene28329:CDS 60.0%
CTTCTCCTGTACCGGGTGCT+AGG + chr4.4:39138261-39138280 MS.gene28329:CDS 60.0%
CTTGCAGGAAGCCTAGCACC+CGG - chr4.4:39138275-39138294 None:intergenic 60.0%
GAAGAAGGCCCACCTGTAGG+TGG - chr4.4:39139552-39139571 None:intergenic 60.0%
GAAGCCCGGCGTGCAAAAGA+GGG + chr4.4:39137867-39137886 MS.gene28329:CDS 60.0%
GCACCAGAGGACGATCTTGC+AGG - chr4.4:39138290-39138309 None:intergenic 60.0%
GCAGCAGATGCCTCCTTCAC+AGG + chr4.4:39139425-39139444 MS.gene28329:CDS 60.0%
GCAGGCGACTGCGCATTTGT+GGG - chr4.4:39139681-39139700 None:intergenic 60.0%
GCGCAGTCGCCTGCTATTGA+TGG + chr4.4:39139687-39139706 MS.gene28329:CDS 60.0%
GCTGCTTCTGGGTCTCAAGC+TGG + chr4.4:39139609-39139628 MS.gene28329:CDS 60.0%
GGCCATCTCCTCCTGCACAA+GGG + chr4.4:39138231-39138250 MS.gene28329:CDS 60.0%
GGGGCCTTGACCAACTCCAA+AGG - chr4.4:39140360-39140379 None:intergenic 60.0%
GGTCTTGGCCCATTACTCCC+AGG - chr4.4:39137984-39138003 None:intergenic 60.0%
GTCCCGATCCCTTTCCCTAC+AGG - chr4.4:39138530-39138549 None:intergenic 60.0%
GTGTGGCTAGGAGCTGATGC+TGG - chr4.4:39139894-39139913 None:intergenic 60.0%
TCAAGGCCCCCCAGAATTGG+AGG + chr4.4:39140370-39140389 MS.gene28329:CDS 60.0%
TGAAGCCCGGCGTGCAAAAG+AGG + chr4.4:39137866-39137885 MS.gene28329:CDS 60.0%
TGGCTAGGAGCTGATGCTGG+CGG - chr4.4:39139891-39139910 None:intergenic 60.0%
TGGGTTGCTGGAAAGGCTGG+GGG - chr4.4:39140223-39140242 None:intergenic 60.0%
TGGTCAAGGCCCCCCAGAAT+TGG + chr4.4:39140367-39140386 MS.gene28329:CDS 60.0%
TGGTGCATGGGCACACCACT+CGG - chr4.4:39139369-39139388 None:intergenic 60.0%
! GGTGCCACAGGAGGAAATGG+AGG - chr4.4:39139747-39139766 None:intergenic 60.0%
CGGCCATCTCCTCCTGCACA+AGG + chr4.4:39138230-39138249 MS.gene28329:CDS 65.0%
GGAAGCCTAGCACCCGGTAC+AGG - chr4.4:39138269-39138288 None:intergenic 65.0%
GGCGAAGCCAACGCGAGACT+CGG + chr4.4:39133932-39133951 MS.gene28329:CDS 65.0%
GGCTAGGAGCTGATGCTGGC+GGG - chr4.4:39139890-39139909 None:intergenic 65.0%
! GGAGCTGATGCTGGCGGGTA+AGG - chr4.4:39139885-39139904 None:intergenic 65.0%
!! GAGTCTCGCGTTGGCTTCGC+CGG - chr4.4:39133933-39133952 None:intergenic 65.0%
!! TCTCGCGTTGGCTTCGCCGG+AGG - chr4.4:39133930-39133949 None:intergenic 70.0%
!! CGCGTTGGCTTCGCCGGAGG+CGG - chr4.4:39133927-39133946 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 39133921 39140502 39133921 ID=MS.gene28329
chr4.4 mRNA 39133921 39140502 39133921 ID=MS.gene28329.t1;Parent=MS.gene28329
chr4.4 exon 39133921 39134193 39133921 ID=MS.gene28329.t1.exon1;Parent=MS.gene28329.t1
chr4.4 CDS 39133921 39134193 39133921 ID=cds.MS.gene28329.t1;Parent=MS.gene28329.t1
chr4.4 exon 39136509 39136754 39136509 ID=MS.gene28329.t1.exon2;Parent=MS.gene28329.t1
chr4.4 CDS 39136509 39136754 39136509 ID=cds.MS.gene28329.t1;Parent=MS.gene28329.t1
chr4.4 exon 39137384 39137464 39137384 ID=MS.gene28329.t1.exon3;Parent=MS.gene28329.t1
chr4.4 CDS 39137384 39137464 39137384 ID=cds.MS.gene28329.t1;Parent=MS.gene28329.t1
chr4.4 exon 39137678 39138555 39137678 ID=MS.gene28329.t1.exon4;Parent=MS.gene28329.t1
chr4.4 CDS 39137678 39138555 39137678 ID=cds.MS.gene28329.t1;Parent=MS.gene28329.t1
chr4.4 exon 39139080 39140502 39139080 ID=MS.gene28329.t1.exon5;Parent=MS.gene28329.t1
chr4.4 CDS 39139080 39140502 39139080 ID=cds.MS.gene28329.t1;Parent=MS.gene28329.t1
Gene Sequence

>MS.gene28329

ATGCCGCCTCCGGCGAAGCCAACGCGAGACTCGGATGAATCTTCAACCCCATCGAACAACCTATGGGTTGCGAATCTATCGCCGGACGTAACAGATTCCGATCTGATGGATCTGTTCGTTCAATACGGAGCTCTCGATAGCGTCACATCTTATTCCTCTCGCAATTACGCTTTCGTGTTCTTCAAACGCATTGATGATGCAAAAGCCGCTAAAAACGCTCTTCAGGGATTCAATTTTCGTGGCAATTCCTTGAAAATTGAGTTTGCTAGACCGGTTTGTTCTCACTTTTGCGCTCTCTTAATTTTCAATTACAATCAGGATTCATGTATTATTTTTTATATTTATTCTAATCTACTTCGATTACTCTTGTTACGATTATTGCATTCAATGTTTTCGGTTACTTTTGTTTTCAATTTTTATCGTTTCAATTTGCCTACGAAATTGCTTGGCATGAATTCTCGATTTCTAATCGCTCAAATCAAATCTGTAGTTTATACGATTTTCCGTACTTTGCTTAATCGATGAAACCTTGAAAACTCCTTGTACATGCGATTGGTTTGTATGGTGAATTATTAGGGTATGTTTGGTGAAGTGTCATGATTGGATTGGGATTTAATGTTTTACTGAAATTAATATTGAATTTTAAAAAGTAGCGCGATTCTGCCAAACACACCCCGAACTTATAATCTAAAGATATAATTACTTAGCAGCTTTGATTAAATTAAAATTCACCATACGCAAATTTATAATATTCGAAGAACTTTTTCAATTTTATCGTGAATTTAGATTTGTGAAAGTTGCTAGTCTAACCGGTTGTAATTAGTGATCTAAATCTAACGATATAGAGACTCTGAAAGCTTGTTTTTGTTTTGTATAATTGGTTTATTAAGACGAACAATACTTCATGAAGTTTAGTTTTACCCATTAAAATTCAAAATCGTGCAATAGGCCTTAATTCTCGAATTCTTTCACGCCAGAATTATGCAGAAATCAATTTCTGCTTTGTGCCAATAAAATGCATAATGAATTCACAATCATGAACGTTGTAATTGGTATTGCGCTTAGAAACCACTGCATATTGAAACCGTGTCAAAATAAACAATCAAATTGGTGTTGCGACTCGCGAGCAGATACCTGACGTGCAACTTGCCAAACATCTGCAAAGCAGTAATCAATTACGCAAAAATATATGAACTGTGTTTAAAATAATCGCAGGGACGGTAAATTTTAGTTGCCATAAATTGCGTAGGGTAAACAGTGTTTAACGCCAAAAAACTGGATTAAACCAAGTATTGCCTCAATGAAATGTTGTGAAAAAAATGAGACCAATCTTATTTGATTAAGGGAAAAATTATGTAGATGAAAATGTAATTTATTCTAGGAGATCGGAGTATAATTTTGTTGTAGTTTTGTTAAAAAATAATTTTGTAGATTTAGAGAAGAAAATGCAGAGCATAGGCAATAATGCTTTTAGTAAATAAGGCTTATTTAGGAGAAAAAAACGCATGATGCAGATATTACGAAAGAGTACTTTTTGAGGTCGTGAAACTGCATCTTATCTGATGTGGATACAACCAGGGGACTACATTTATCTCTAAATAATTTCCCGTCTGGTACTGTACTACATCTGGTTTCAACTTTATCTTTGCACACGTACAACTTCCAGATAACATGCGTTTCTGGGAAACTCCAAACTATCCCTGTTACCACCGTTAAAACTAATCCTAGTCCTTCTAATGATGTAATGCAACGTGAATGAAAGAAAAGTAAAAGACAAATAAAAATAACACAGTTTCTATTTATCCATGAATAATAATACCAAATCTAAATAGCAACCTGACTAGTAATTATAAGAGACCCCATTTTCTTTTTATAGCCACGTTTAAATCATCAATAGTAAAAGGTGCCTTTTTTGGTTTCCGAACAAGACTTAGAATCATTCATGGAGCTGCAAATACGTTGTAGATGTAAAATACCAGACTACCAGTAAAATGTAACCAAAAAAAAAAAAAAAAAAAAGATTACTAGTAAAATACAAACTCAATGTATTATAATTATAGAAATACATTGGACATAGTCGGGGGATTCTAGTTCTTAAGTTTTGGCAACAAAAATAAAATAAAATTAGACTGTAATTTAATTCTGTTGCTTTTCAAATTTCTGCGGGGGCAGTTTTTTGTACTAGAACTTAAACTTAGATTTTAGTCCTGTACCGCAAATGTTGTTTTTACATAAAATAAACTCCTTTACACTATCAAACGCGTAATGCATTTGATGAAGAAGCGACTTGATTTCCTTTTTCTACTTGATTATAACAATAGCAATTATAGCCTTTTTCTACGGAATTTATTTATTCTTGGCCACCTCAAGATATGAATTTCTTTTCAACAGTTTGACTGTTAAATCCAAAGTAGGAGCTGTCAAAATTAAGAAGTGGTTGGTGCCTTTCAATAGTTTGAAGCAAAAATACAATACAATTTCCTTTTAGTATTAGCAGATTGTTTTGATTGTAATGTGTTTGAATGTAGATGCTAAGATATGTATATTTCTTCACGCGTGTGTTTAACCAAAAATGACGTTATTTCCAGGCAAAGACATGTAAACAGCTTTGGGTAGGTGGCATTAGCCCAGCTGTAACAAAGGAAGACTTGGAAGCTGACTTCCGTAAATTTGGTAAAGTTGAGGATTTCAAGTTCTTCAGAGACAGAAATACTGCATGTGTTGAATTTTTCAATTTAGATGATGCTATTCAGGCAATGAAAATTATGAATGGAAAACGTATCGGTGGGGAAAATATCCGTGTTGACTTCCTCCGATCAAATTATGCAAAAAGAGTAAGTTTGTACTTTAGAATGCTGATTTTGTTTCTTGTTACTCAACTTCCGTATATTATTAATTACTTCCTCCGGTCCAATATATAAGAGAGAAAACTGGATCAACAAAAATTGATGTACCTGGTTTAAAATTTGGACCAGATGCATCAACTTTTGTTGACCAACTTTCTCTTATATATAGGACCGGATGAAGTAGTTGCTTATTGTACTATAAATATCCCGACGTCTCACGGCAGGATCTATAATTTCAATTTGGTAACTGGGGTGTGGTTCTTTGAAAATGATACATACTGGAATGCTATTTCTTGCAATAAATAATTCATATACGAGTGAACTACCTTTTGTGAAGCTTTTCACATTTTAAAATGGACCTTGGTTGCTTTTATTGTAAGGTTTGTCTGATTTGGTCAGTAGTGTTTTGGATGTGTTATATTAGTTTCATTCCAATTACTTTTCGTCGATGTTTTATAGAAATTGGTGGATTCTGTGTTAGGTACCGATTCTCTGACATTAGTGTGACTATTCCACTAACCCCGAGGATTACCGAACAAGTTGTTTCTTTCATGTTATTTTTGCTCTTCTGGATGTTTTTCATACGCCCCTAACATTTCGTTTTCTGATTTCTGTAGGATCAAGGGCATGATTATGGGCAATTTCAAGGCAAAAGCTTTGGGCCTTCTGATTCTTATTCTGGACAAAAAAGGCCACTGGTGAGAATACTGTACAATGTGCATCTAATTGGATGTGTCTAGTCCTTTTCATCTTTTGTCATTGCCTTGTTGGATGTAATGTGTTGGGATTTGAAGACCATACACTGTTAAGACTTGCATGCACCTATTTGTATATTGGCTGATGTTTTCTTTATGCTGGTATCTTGATTTTTTTTAGTTTTTACTTATAAAAACTTGTTCTCATGTCAACAGAATTCACAACCTCTAATGAGGAGGAAGGGTGACGGTCAACCCAATAATATTTTGTGGATCGGTTATCCCCCCAATGTTCAGATCGATGAGCAAATGCTCCACAATGCCATGATCCTTTTTGGTGAAATTGAGAGAATCAAGAGTTTTCCTTCAAGAAATTTTTCATTTGTTGAATTTAGAAGTGTTGATGAAGCCCGGCGTGCAAAAGAGGGTCTTCAAGGGCGCCTTTTCAATGATCCTCACATAACAATTAATTATTCTAATGGTGACCAGGTACACGGCAAAGACTACCCTGGCTTTTATCCTGGGAGTAATGGGCCAAGACCTGATTTATTCCTAAATGAGCATCCATATCGACCTGCACAAATGGATTTATTTGGTCATAATCGTCCTATGATTCCAAATAGTTTTCCTGGACAATTGCCAAATGGTGGTATTGTTGGTCCAAACATACCAGTGCGGCCTTTTGGTCCTAATGGTGGTCCTGAATCTGTTGTTTCTGGCCCTGAGTTTAACGAGAATAGTACACTACACAAGGGTCCAAACTGGAAACGGCCATCTCCTCCTGCACAAGGGTTGCTTTCTTCTCCTGTACCGGGTGCTAGGCTTCCTGCAAGATCGTCCTCTGGTGCATGGGATGTACTTGACATAAATCATATTCCAAGAGATTCTAAGCGGTCAAGGATAGATGGTGCATTACCTAATGATGATCCTTATGCAGGGAGGGGTATCCTTGGTTCAGCAAGCACGAGGATTACAGGTGGAGTACATGCTTCTGTCCAACCTGATCATATATGGCGCGGACTTATTGCAAAAGGAGGAACTCCTGTTTGTCGTGCTAGATGCGTCCCTGTAGGGAAAGGGATCGGGACAGAGCTGTGAGTTTAATTTTATTTGTTCTTAGTATTTCAATTTAATTTTGTAAATATGGAAGAGGACTTTTCTTCCAATAAGTTTATTTCTGCCGACTTCTTTTGCATTTGACCCCTCCATCCCTATTTGCTGGAAAAGTTACTTGTAGCAAATGGTATATCATTAGCATAGAATGTATTTTCTAAATAAAAGAAATATGTAGGTTTTATGAATTTTATTCGGTTGTGCTTCATGCTAGCTTTTCTATTATAAATTTGTTCTTCATTGTATCATTAGGAAGAAGAAAACTGTTCTTATTACTCCTTTTTTTATTTTTTCTAAAGAAACTATTCATATTATTTTTGGTAAATAAGGTAACCCACAAGCTCTGTCTTTTTTTCTCCAATATAAGTGATTGGCCCTTAGTTCTTGGAAATGGGCCCATTTGCTTTTTCCTTGAAAACTGTCTTACATAGCAGTCAAAATGTATACCTGTCTCAAGGTCTTGTTTAGAGGCTGTATTGAAGTTTGTTTTGTTCATTTATTGCAGTCCTGAAGTTGTGGATTGCTCAGCTAGGACGGGATTGGATACACTTGCAGCACACTATGCTGATGCAATTGACTTTGAGATTGTTTTCTTTCTGCCTGATAGTGAAAATGATTTTGGTTCATACACTGAATTCCTACGCTACCTTGGTGCAAAAAATCGTGCTGGTGTTGCCAAATTTGACAATACAACTTTATTCTTGGTACCTCCTTCTGATTTCCTGACAGATGTTCTGAAAGTCACCGGACCTGAACGTCTATATGGTGTCGTTCTCAAGTTTGCACCAGTACCGAGTGGTGTGCCCATGCACCAATCATCACATTTGCCTGTACCGTCAAATCAATATATGCAGCAGATGCCTCCTTCACAGGCTGAATATGATATGAATCCTGCAAAGGAGGAACAAGTTTTAGCAATGAATTACAACCGAATGTTGCACGAGGATTCTAAGCTTCCTGCTAAACAAGTATACCCACCTACAGGTGGGCCTTCTTCAGTTCAGCCTGCAGCTCCGGACTATGCTCTAAACACTGCTGCTTCTGGGTCTCAAGCTGGAGTTGCATTAACACCTGAGCTTATTGCAACTTTAGCTTCTTTTCTGCCCACAAATGCGCAGTCGCCTGCTATTGATGGTGCTAAGTCAGGTGCAGGCTCCTCAACTGTGAAGCCTCCATTTCCTCCTGTGGCACCTAATGATGGAAACCAATCTCAATTATGGAAACAGGATCATCAAATTGCGGATCAATCCATTCATCCATCTCAGCAGTTTAGGAATATGTATGACAGTCAGAATGCTCATTATCAGCCTTACCCGCCAGCATCAGCTCCTAGCCACACTGCTCAAACGTTCTCTGGCAGTTCTCATATTCAAGACAATGCTGTTAGCCAGCAACAGCAAGGAGTTGTTTCATCTAGACTCGTGTCTAATTTTGTGACACCTACTCAAAGTGGACAGGTAGCTGCATCCCCCCATTTCAGTCATCAGTATCAGGCTGAAGTTCCCCCCAATACTCAGAAAGGCTTTCCAGGAAGTGATGTCTCTGTTTTATACAATTCTCAGGCTTTCCAGCAACCTAATAATAACCACCATCCTTTCCAGCAACCTAATAATAACCCCCAGCATTTCCAGCAATCTAATAATAACCCCCAGCCTTTCCAGCAACCCAATAATTCTATTGCCTTATCTAGTCAAGTTAACAGTGCTAATCCTCAGCATCAGCCTGTCATGCAATATACCGCAGACCAAGTAAACTCAAACCCTCCCATCCAACAACATCCTGCCTTTGGAGTTGGTCAAGGCCCCCCAGAATTGGAGGCTGATAAGAACCAGAGATACCAGTCAACATTGCAGTTTGCTGCCAATCTTCTACTCCAAATACAGCAGCAGCAAACACAAGGAGGACATGGGCCAGGAGTTCAACAATAA
Protein sequence

>MS.gene28329.t1

MPPPAKPTRDSDESSTPSNNLWVANLSPDVTDSDLMDLFVQYGALDSVTSYSSRNYAFVFFKRIDDAKAAKNALQGFNFRGNSLKIEFARPAKTCKQLWVGGISPAVTKEDLEADFRKFGKVEDFKFFRDRNTACVEFFNLDDAIQAMKIMNGKRIGGENIRVDFLRSNYAKRDQGHDYGQFQGKSFGPSDSYSGQKRPLNSQPLMRRKGDGQPNNILWIGYPPNVQIDEQMLHNAMILFGEIERIKSFPSRNFSFVEFRSVDEARRAKEGLQGRLFNDPHITINYSNGDQVHGKDYPGFYPGSNGPRPDLFLNEHPYRPAQMDLFGHNRPMIPNSFPGQLPNGGIVGPNIPVRPFGPNGGPESVVSGPEFNENSTLHKGPNWKRPSPPAQGLLSSPVPGARLPARSSSGAWDVLDINHIPRDSKRSRIDGALPNDDPYAGRGILGSASTRITGGVHASVQPDHIWRGLIAKGGTPVCRARCVPVGKGIGTELPEVVDCSARTGLDTLAAHYADAIDFEIVFFLPDSENDFGSYTEFLRYLGAKNRAGVAKFDNTTLFLVPPSDFLTDVLKVTGPERLYGVVLKFAPVPSGVPMHQSSHLPVPSNQYMQQMPPSQAEYDMNPAKEEQVLAMNYNRMLHEDSKLPAKQVYPPTGGPSSVQPAAPDYALNTAASGSQAGVALTPELIATLASFLPTNAQSPAIDGAKSGAGSSTVKPPFPPVAPNDGNQSQLWKQDHQIADQSIHPSQQFRNMYDSQNAHYQPYPPASAPSHTAQTFSGSSHIQDNAVSQQQQGVVSSRLVSNFVTPTQSGQVAASPHFSHQYQAEVPPNTQKGFPGSDVSVLYNSQAFQQPNNNHHPFQQPNNNPQHFQQSNNNPQPFQQPNNSIALSSQVNSANPQHQPVMQYTADQVNSNPPIQQHPAFGVGQGPPELEADKNQRYQSTLQFAANLLLQIQQQQTQGGHGPGVQQ