AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28580.t1 MTR_8g079520 94.618 799 40 2 1 797 1 798 0.0 1545
MS.gene28580.t1 MTR_8g079550 75.871 804 174 5 1 797 1 791 0.0 1211
MS.gene28580.t1 MTR_5g018060 44.338 839 398 19 3 793 2 819 0.0 662
MS.gene28580.t1 MTR_5g018210 42.772 837 424 16 1 793 1 826 0.0 628
MS.gene28580.t1 MTR_0391s0020 44.157 813 413 11 11 793 10 811 0.0 615
MS.gene28580.t1 MTR_5g018120 42.663 811 424 20 3 791 2 793 0.0 613
MS.gene28580.t1 MTR_8g079450 44.389 802 398 12 22 793 18 801 0.0 596
MS.gene28580.t1 MTR_8g079400 44.944 801 369 13 22 793 18 775 0.0 587
MS.gene28580.t1 MTR_8g079400 44.944 801 369 13 22 793 28 785 0.0 586
MS.gene28580.t1 MTR_8g079360 44.625 800 396 11 22 793 19 799 0.0 583
MS.gene28580.t1 MTR_8g079280 47.929 676 320 10 141 791 78 746 0.0 566
MS.gene28580.t1 MTR_8g479430 42.066 813 432 17 5 790 3 803 0.0 539
MS.gene28580.t1 MTR_5g018070 46.560 625 290 13 199 791 127 739 1.58e-178 531
MS.gene28580.t1 MTR_8g479450 39.120 818 449 18 9 789 4 809 1.14e-170 513
MS.gene28580.t1 MTR_8g079380 47.046 457 217 5 359 793 109 562 8.99e-127 391
MS.gene28580.t1 MTR_1g021100 33.837 662 385 17 153 790 182 814 3.46e-104 339
MS.gene28580.t1 MTR_1g021110 33.181 657 402 15 152 791 178 814 1.55e-99 327
MS.gene28580.t1 MTR_8g079350 50.581 344 164 4 138 481 91 428 2.29e-97 310
MS.gene28580.t1 MTR_5g018910 39.029 515 240 12 1 460 1 496 9.31e-92 301
MS.gene28580.t1 MTR_5g018160 42.211 398 207 9 114 508 2 379 8.34e-91 291
MS.gene28580.t1 MTR_8g079355 52.297 283 132 3 509 791 12 291 6.16e-78 254
MS.gene28580.t1 MTR_5g018110 41.803 244 139 3 44 287 43 283 1.16e-45 171
MS.gene28580.t1 MTR_7g024980 40.331 181 84 4 430 589 8 185 5.21e-35 132
MS.gene28580.t1 MTR_5g018190 31.959 291 160 9 8 281 11 280 8.07e-31 126
MS.gene28580.t1 MTR_7g024973 48.800 125 64 0 669 793 2 126 1.06e-28 112
MS.gene28580.t1 MTR_5g018130 57.895 76 31 1 564 639 1 75 1.11e-20 87.4
MS.gene28580.t1 MTR_1g037610 25.222 563 327 22 163 693 178 678 2.45e-18 90.9
MS.gene28580.t1 MTR_2g040220 24.534 644 371 25 152 765 189 747 4.99e-18 90.1
MS.gene28580.t1 MTR_8g028800 24.781 686 423 29 130 772 175 810 9.78e-18 89.0
MS.gene28580.t1 MTR_3g466620 23.832 642 380 25 178 796 172 727 1.32e-17 88.2
MS.gene28580.t1 MTR_6g071935 24.726 639 360 31 155 767 199 742 1.41e-17 88.2
MS.gene28580.t1 MTR_3g012470 25.934 482 293 19 285 728 318 773 2.06e-17 87.8
MS.gene28580.t1 MTR_3g012470 25.726 482 294 19 285 728 318 773 2.20e-17 87.8
MS.gene28580.t1 MTR_4g094540 23.910 711 422 31 149 774 165 841 6.94e-17 85.9
MS.gene28580.t1 MTR_3g032110 22.843 823 476 27 1 764 1 723 7.37e-17 86.3
MS.gene28580.t1 MTR_3g020490 25.455 550 292 22 236 753 303 766 8.38e-17 85.9
MS.gene28580.t1 MTR_1g028720 25.047 531 330 21 154 647 72 571 9.31e-17 85.5
MS.gene28580.t1 MTR_3g020650 26.737 475 259 19 303 764 352 750 1.17e-16 85.5
MS.gene28580.t1 MTR_6g074090 23.721 645 346 29 155 764 197 730 1.55e-16 84.7
MS.gene28580.t1 MTR_6g072310 24.224 644 376 30 155 767 199 761 1.64e-16 85.1
MS.gene28580.t1 MTR_4g050910 23.721 645 346 29 155 764 197 730 1.94e-16 84.3
MS.gene28580.t1 MTR_2g040230 24.883 639 369 26 155 765 196 751 2.97e-16 84.0
MS.gene28580.t1 MTR_8g042470 22.800 750 420 35 61 764 115 751 3.34e-16 84.0
MS.gene28580.t1 MTR_8g042470 23.545 739 428 35 61 764 115 751 3.45e-16 84.0
MS.gene28580.t1 MTR_0277s0020 24.341 645 348 30 155 764 197 736 4.79e-16 83.2
MS.gene28580.t1 MTR_8g042470 22.800 750 420 35 61 764 115 751 4.96e-16 83.6
MS.gene28580.t1 MTR_1g060030 25.574 653 341 33 152 764 35 582 5.02e-16 83.2
MS.gene28580.t1 MTR_6g074660 24.196 653 356 29 155 764 198 754 6.42e-16 82.8
MS.gene28580.t1 MTR_6g471160 24.704 591 348 29 155 721 187 704 8.32e-16 82.4
MS.gene28580.t1 MTR_0277s0020 24.341 645 348 30 155 764 197 736 8.60e-16 82.4
MS.gene28580.t1 MTR_0277s0020 24.117 651 372 30 152 764 194 760 9.32e-16 82.4
MS.gene28580.t1 MTR_6g471160 24.704 591 348 29 155 721 32 549 9.94e-16 82.0
MS.gene28580.t1 MTR_8g039910 22.975 679 400 25 125 764 168 762 1.08e-15 82.4
MS.gene28580.t1 MTR_8g039870 22.975 679 400 25 125 764 168 762 1.08e-15 82.4
MS.gene28580.t1 MTR_0277s0010 23.981 638 353 28 155 761 197 733 1.32e-15 82.0
MS.gene28580.t1 MTR_4g020700 22.742 620 368 25 173 764 724 1260 1.60e-15 82.0
MS.gene28580.t1 MTR_6g074875 24.106 643 349 28 155 764 198 734 1.63e-15 81.6
MS.gene28580.t1 MTR_4g020700 22.742 620 368 25 173 764 724 1260 2.02e-15 81.6
MS.gene28580.t1 MTR_7g021000 23.548 637 379 24 173 789 183 731 2.68e-15 80.9
MS.gene28580.t1 MTR_1g007300 23.418 632 347 24 172 764 217 750 3.23e-15 80.5
MS.gene28580.t1 MTR_6g071430 23.729 649 390 29 155 764 187 769 3.81e-15 80.5
MS.gene28580.t1 MTR_4g016610 25.527 474 264 19 306 764 360 759 3.99e-15 80.5
MS.gene28580.t1 MTR_7g021000 23.511 638 378 25 173 789 183 731 4.45e-15 80.1
MS.gene28580.t1 MTR_4g021690 25.601 582 323 25 185 739 199 697 4.96e-15 80.1
MS.gene28580.t1 MTR_6g478030 23.333 660 357 28 155 764 197 757 6.81e-15 79.7
MS.gene28580.t1 MTR_6g015730 24.257 639 354 29 173 773 515 1061 7.94e-15 79.3
MS.gene28580.t1 MTR_1g078190 22.511 693 449 23 108 751 103 756 8.52e-15 79.3
MS.gene28580.t1 MTR_3g027420 24.113 564 345 20 156 693 159 665 8.85e-15 79.3
MS.gene28580.t1 MTR_6g071790 23.184 647 372 30 155 778 187 731 1.08e-14 79.0
MS.gene28580.t1 MTR_3g014320 23.411 598 368 22 156 724 171 707 1.16e-14 79.0
MS.gene28580.t1 MTR_4g022560 25.263 475 274 22 285 731 293 714 1.35e-14 78.6
MS.gene28580.t1 MTR_4g013370 26.202 416 233 17 337 730 373 736 1.41e-14 78.6
MS.gene28580.t1 MTR_0003s0090 23.256 645 332 28 155 764 197 713 1.81e-14 78.2
MS.gene28580.t1 MTR_5g040490 22.003 659 387 26 155 764 198 778 2.34e-14 77.8
MS.gene28580.t1 MTR_6g478020 23.100 658 367 29 152 764 421 984 2.38e-14 77.8
MS.gene28580.t1 MTR_7g078780 25.047 527 293 22 287 758 337 816 2.86e-14 77.8
MS.gene28580.t1 MTR_7g078780 25.047 527 293 22 287 758 337 816 3.12e-14 77.4
MS.gene28580.t1 MTR_7g091550 23.300 691 398 25 175 779 201 845 3.16e-14 77.4
MS.gene28580.t1 MTR_6g076090 23.648 647 371 29 152 767 201 755 3.32e-14 77.4
MS.gene28580.t1 MTR_6g076220 24.769 650 369 30 152 765 196 761 4.00e-14 77.0
MS.gene28580.t1 MTR_8g445980 23.878 691 405 29 168 775 179 831 6.60e-14 76.3
MS.gene28580.t1 MTR_2g072820 21.338 792 487 29 11 763 7 701 7.63e-14 76.3
MS.gene28580.t1 MTR_1g063960 22.610 659 346 27 155 764 184 727 9.19e-14 75.9
MS.gene28580.t1 MTR_6g078420 24.435 487 280 22 303 764 349 772 1.25e-13 75.5
MS.gene28580.t1 MTR_3g056585 24.305 683 392 31 154 765 170 798 1.38e-13 75.1
MS.gene28580.t1 MTR_3g435740 22.384 755 476 27 1 705 46 740 1.52e-13 75.5
MS.gene28580.t1 MTR_8g062130 25.037 667 392 32 141 768 177 774 1.53e-13 75.5
MS.gene28580.t1 MTR_8g062130 29.665 209 112 6 580 765 669 865 8.15e-12 69.7
MS.gene28580.t1 MTR_8g062130 29.688 256 124 9 557 764 757 1004 2.22e-11 68.2
MS.gene28580.t1 MTR_0419s0040 23.684 646 368 29 155 764 197 753 1.88e-13 75.1
MS.gene28580.t1 MTR_8g105820 24.649 499 289 19 260 732 221 658 1.97e-13 74.7
MS.gene28580.t1 MTR_2g072110 22.360 805 456 38 12 762 9 698 2.50e-13 74.7
MS.gene28580.t1 MTR_7g078180 24.842 632 345 26 203 764 249 820 2.59e-13 74.3
MS.gene28580.t1 MTR_2g072110 22.360 805 456 38 12 762 9 698 2.71e-13 74.7
MS.gene28580.t1 MTR_6g074855 22.470 672 371 24 155 764 198 781 3.88e-13 73.9
MS.gene28580.t1 MTR_3g020420 25.333 450 256 18 326 765 185 564 4.80e-13 73.6
MS.gene28580.t1 MTR_7g078770 24.423 520 281 19 306 764 358 826 6.49e-13 73.2
MS.gene28580.t1 MTR_4g020850 24.149 617 362 26 173 764 930 1465 6.95e-13 73.2
MS.gene28580.t1 MTR_4g020550 23.732 611 367 26 176 764 685 1218 7.28e-13 73.2
MS.gene28580.t1 MTR_6g083860 24.462 650 343 29 155 761 197 741 8.24e-13 72.8
MS.gene28580.t1 MTR_6g015695 23.718 624 357 28 173 764 250 786 8.25e-13 72.8
MS.gene28580.t1 MTR_5g040440 24.178 608 326 30 178 741 4 520 1.15e-12 72.0
MS.gene28580.t1 MTR_8g090305 29.572 257 127 6 556 764 252 502 1.37e-12 71.6
MS.gene28580.t1 MTR_8g090305 30.841 214 133 5 556 764 86 289 1.49e-11 68.2
MS.gene28580.t1 MTR_3g014360 24.260 507 305 19 156 631 171 629 1.70e-12 72.0
MS.gene28580.t1 MTR_4g051698 25.079 634 339 28 155 758 197 724 1.85e-12 71.6
MS.gene28580.t1 MTR_3g466750 25.360 556 315 25 178 704 156 640 1.99e-12 71.6
MS.gene28580.t1 MTR_3g018980 22.634 782 467 33 3 724 2 705 2.02e-12 71.6
MS.gene28580.t1 MTR_7g078270 32.973 185 94 4 605 765 81 259 2.21e-12 70.9
MS.gene28580.t1 MTR_4g014570 22.712 612 371 26 173 761 276 808 2.26e-12 71.6
MS.gene28580.t1 MTR_3g018980 22.634 782 467 32 3 724 2 705 2.31e-12 71.2
MS.gene28580.t1 MTR_3g012240 22.701 696 448 27 155 786 221 890 2.49e-12 71.2
MS.gene28580.t1 MTR_6g015430 23.553 501 302 19 282 769 177 609 2.60e-12 71.2
MS.gene28580.t1 MTR_6g015510 24.074 648 347 27 171 760 245 805 2.64e-12 71.2
MS.gene28580.t1 MTR_3g032200 22.494 778 465 31 1 712 1 706 2.73e-12 71.2
MS.gene28580.t1 MTR_6g015430 23.274 507 296 20 282 769 370 802 2.89e-12 71.2
MS.gene28580.t1 MTR_2g040370 24.850 499 286 18 282 765 321 745 2.95e-12 71.2
MS.gene28580.t1 MTR_6g074810 23.817 634 382 28 155 764 198 754 3.44e-12 70.9
MS.gene28580.t1 MTR_2g040370 24.850 499 286 18 282 765 321 745 3.46e-12 70.9
MS.gene28580.t1 MTR_4g051738 24.413 639 357 28 155 767 197 735 3.70e-12 70.9
MS.gene28580.t1 MTR_3g032340 21.900 621 366 18 171 764 198 726 3.83e-12 70.9
MS.gene28580.t1 MTR_6g072590 23.401 641 378 29 155 761 180 741 5.55e-12 70.1
MS.gene28580.t1 MTR_3g018930 24.724 635 344 30 157 743 186 734 5.70e-12 70.1
MS.gene28580.t1 MTR_5g076840 39.640 111 55 3 665 764 568 677 5.71e-12 70.1
MS.gene28580.t1 MTR_2g099920 29.720 286 141 11 499 748 613 874 5.92e-12 70.1
MS.gene28580.t1 MTR_1g030770 23.040 625 362 24 155 742 168 710 6.41e-12 70.1
MS.gene28580.t1 MTR_2g099920 29.720 286 141 11 499 748 434 695 6.61e-12 69.7
MS.gene28580.t1 MTR_4g055630 22.408 598 368 21 173 745 178 704 6.66e-12 69.7
MS.gene28580.t1 MTR_2g099920 29.720 286 141 11 499 748 545 806 6.88e-12 69.7
MS.gene28580.t1 MTR_6g073250 24.089 631 380 27 155 764 201 753 7.39e-12 69.7
MS.gene28580.t1 MTR_6g074820 23.572 683 370 30 155 764 198 801 7.47e-12 69.7
MS.gene28580.t1 MTR_7g078300 23.878 691 385 31 154 743 167 817 7.56e-12 69.7
MS.gene28580.t1 MTR_6g074620 23.622 635 370 28 155 747 198 759 7.94e-12 69.7
MS.gene28580.t1 MTR_2g040260 25.605 496 286 19 282 765 322 746 9.08e-12 69.7
MS.gene28580.t1 MTR_6g072480 24.468 470 274 21 306 764 354 753 9.80e-12 69.3
MS.gene28580.t1 MTR_3g479510 24.319 514 304 24 259 755 302 747 1.33e-11 68.9
MS.gene28580.t1 MTR_6g087850 23.954 693 389 31 125 784 177 764 1.41e-11 68.9
MS.gene28580.t1 MTR_8g090280 31.553 206 117 6 557 753 702 892 1.45e-11 68.9
MS.gene28580.t1 MTR_5g038180 24.341 493 298 20 282 764 336 763 1.45e-11 68.9
MS.gene28580.t1 MTR_8g062140 28.638 213 136 6 557 764 669 870 1.50e-11 68.9
MS.gene28580.t1 MTR_8g062140 28.682 258 143 7 536 764 719 964 2.08e-11 68.6
MS.gene28580.t1 MTR_6g079090 23.934 610 333 28 152 729 180 690 1.79e-11 68.6
MS.gene28580.t1 MTR_3g018930 25.000 636 341 32 157 743 186 734 1.81e-11 68.6
MS.gene28580.t1 MTR_3g027250 25.813 461 279 18 3 428 2 434 2.01e-11 68.6
MS.gene28580.t1 MTR_8g020360 23.913 644 384 27 155 764 223 794 2.19e-11 68.2
MS.gene28580.t1 MTR_7g018670 21.035 599 338 24 156 726 126 617 2.35e-11 67.8
MS.gene28580.t1 MTR_8g069625 23.648 647 347 29 155 764 197 733 2.77e-11 67.8
MS.gene28580.t1 MTR_3g079780 23.780 656 367 27 155 764 200 768 2.78e-11 67.8
MS.gene28580.t1 MTR_4g043630 23.706 599 312 24 282 786 322 869 3.08e-11 67.8
MS.gene28580.t1 MTR_2g040160 23.101 645 379 25 152 765 256 814 3.17e-11 67.8
MS.gene28580.t1 MTR_4g043630 23.706 599 312 24 282 786 322 869 3.18e-11 67.8
MS.gene28580.t1 MTR_3g116640 38.835 103 62 1 663 764 125 227 3.22e-11 67.4
MS.gene28580.t1 MTR_4g022460 23.769 589 357 27 185 743 199 725 3.23e-11 67.8
MS.gene28580.t1 MTR_4g043630 23.706 599 312 24 282 786 322 869 3.46e-11 67.8
MS.gene28580.t1 MTR_6g072760 23.890 653 353 29 152 765 197 744 3.56e-11 67.4
MS.gene28580.t1 MTR_6g472230 22.488 627 377 28 155 764 371 905 3.58e-11 67.8
MS.gene28580.t1 MTR_0468s0010 21.947 647 391 28 171 784 186 751 3.66e-11 67.4
MS.gene28580.t1 MTR_6g472300 22.329 627 378 28 155 764 187 721 3.98e-11 67.4
MS.gene28580.t1 MTR_4g091380 22.816 412 265 18 154 534 152 541 4.24e-11 67.0
MS.gene28580.t1 MTR_2g062360 24.357 583 352 27 259 785 43 592 5.35e-11 66.6
MS.gene28580.t1 MTR_3g012250 27.667 300 173 16 155 428 185 466 5.37e-11 67.0
MS.gene28580.t1 MTR_7g091140 22.804 592 346 23 237 745 271 834 5.48e-11 67.0
MS.gene28580.t1 MTR_8g075440 23.364 535 333 21 242 764 284 753 5.52e-11 67.0
MS.gene28580.t1 MTR_6g015475 23.232 594 308 25 173 731 240 720 6.52e-11 66.6
MS.gene28580.t1 MTR_6g078480 24.224 644 351 28 151 752 184 732 6.73e-11 66.6
MS.gene28580.t1 MTR_1g078490 33.728 169 88 5 617 764 499 664 7.40e-11 66.2
MS.gene28580.t1 MTR_6g074650 24.045 628 339 29 155 725 32 578 7.65e-11 66.6
MS.gene28580.t1 MTR_4g022540 24.109 477 263 20 285 739 293 692 7.77e-11 66.2
MS.gene28580.t1 MTR_2g437560 22.717 449 237 17 337 769 368 722 7.95e-11 66.2
MS.gene28580.t1 MTR_5g028340 31.288 163 95 4 641 790 922 1080 8.16e-11 66.2
MS.gene28580.t1 MTR_3g062340 23.497 549 336 22 178 704 171 657 8.78e-11 66.6
MS.gene28580.t1 MTR_7g491180 22.181 541 327 23 278 745 315 834 9.89e-11 65.9
MS.gene28580.t1 MTR_7g091190 22.181 541 327 23 278 745 315 834 9.89e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28580.t1 AT5G66900 35.635 811 474 17 8 791 10 799 1.02e-143 443
MS.gene28580.t1 AT5G66900 35.635 811 474 17 8 791 58 847 2.94e-143 443
MS.gene28580.t1 AT5G66910 34.686 813 473 19 8 786 12 800 2.09e-130 408
MS.gene28580.t1 AT4G33300 30.797 828 498 20 10 790 7 806 2.33e-106 345
MS.gene28580.t1 AT4G33300 30.797 828 498 20 10 790 7 806 2.33e-106 345
MS.gene28580.t1 AT5G04720 33.997 653 389 14 152 790 177 801 6.24e-105 341
MS.gene28580.t1 AT5G47280 33.649 633 385 14 169 790 5 613 3.70e-101 326
MS.gene28580.t1 AT1G33560 34.769 627 355 14 178 790 191 777 4.92e-97 320
MS.gene28580.t1 AT5G66900 31.978 541 328 12 8 526 58 580 6.07e-73 249
MS.gene28580.t1 AT5G66890 36.430 409 235 12 395 791 10 405 3.20e-65 223
MS.gene28580.t1 AT5G66630 31.173 324 205 5 2 311 6 325 1.38e-35 144
MS.gene28580.t1 AT1G69550 39.070 215 115 7 557 764 876 1081 6.48e-24 108
MS.gene28580.t1 AT1G69550 35.593 236 127 7 557 777 1020 1245 1.04e-21 102
MS.gene28580.t1 AT1G69550 26.638 473 284 16 308 764 416 841 8.19e-21 99.0
MS.gene28580.t1 AT1G69550 42.767 159 86 3 607 764 783 937 2.14e-17 87.8
MS.gene28580.t1 AT3G25510 32.787 244 141 8 536 773 553 779 3.71e-21 100
MS.gene28580.t1 AT3G25510 30.741 270 150 8 522 764 467 726 6.33e-19 92.8
MS.gene28580.t1 AT3G25510 31.579 209 126 7 557 758 617 815 1.45e-13 75.5
MS.gene28580.t1 AT3G25510 23.656 465 306 13 309 765 161 584 4.64e-13 73.6
MS.gene28580.t1 AT3G25510 32.787 244 141 8 536 773 553 779 3.71e-21 100
MS.gene28580.t1 AT3G25510 30.741 270 150 8 522 764 467 726 6.33e-19 92.8
MS.gene28580.t1 AT3G25510 31.579 209 126 7 557 758 617 815 1.45e-13 75.5
MS.gene28580.t1 AT3G25510 23.656 465 306 13 309 765 161 584 4.64e-13 73.6
MS.gene28580.t1 AT5G44510 25.852 499 282 17 309 764 376 829 1.79e-20 97.8
MS.gene28580.t1 AT5G44510 31.111 180 104 3 557 728 792 959 7.05e-15 79.7
MS.gene28580.t1 AT5G44510 29.474 190 125 3 580 764 667 852 8.36e-15 79.3
MS.gene28580.t1 AT5G44510 25.852 499 282 17 309 764 376 829 2.09e-20 97.4
MS.gene28580.t1 AT5G44510 31.111 180 104 3 557 728 792 959 7.60e-15 79.7
MS.gene28580.t1 AT5G44510 29.474 190 125 3 580 764 667 852 8.79e-15 79.3
MS.gene28580.t1 AT5G44510 25.852 499 282 17 309 764 376 829 2.47e-20 97.4
MS.gene28580.t1 AT5G44510 31.111 180 104 3 557 728 792 959 8.34e-15 79.3
MS.gene28580.t1 AT5G44510 29.474 190 125 3 580 764 667 852 9.56e-15 79.3
MS.gene28580.t1 AT5G44510 25.852 499 282 17 309 764 376 829 2.58e-20 97.4
MS.gene28580.t1 AT5G44510 31.111 180 104 3 557 728 792 959 7.66e-15 79.7
MS.gene28580.t1 AT5G44510 29.474 190 125 3 580 764 667 852 9.24e-15 79.3
MS.gene28580.t1 AT5G11250 34.524 252 146 9 522 767 601 839 1.95e-19 94.4
MS.gene28580.t1 AT5G11250 26.000 500 298 19 309 764 318 789 1.15e-18 92.0
MS.gene28580.t1 AT5G11250 34.524 252 146 9 522 767 601 839 1.95e-19 94.4
MS.gene28580.t1 AT5G11250 26.000 500 298 19 309 764 318 789 1.15e-18 92.0
MS.gene28580.t1 AT5G11250 34.524 252 146 9 522 767 683 921 2.36e-19 94.4
MS.gene28580.t1 AT5G11250 26.000 500 298 19 309 764 400 871 1.08e-18 92.0
MS.gene28580.t1 AT2G14080 24.957 581 308 26 240 766 320 826 2.49e-19 94.0
MS.gene28580.t1 AT2G14080 38.400 125 76 1 641 764 746 870 1.46e-15 82.0
MS.gene28580.t1 AT2G14080 31.818 220 132 6 532 745 691 898 2.66e-14 77.8
MS.gene28580.t1 AT2G14080 33.488 215 126 7 557 764 690 894 2.85e-14 77.8
MS.gene28580.t1 AT2G14080 24.957 581 308 26 240 766 187 693 2.60e-19 94.0
MS.gene28580.t1 AT2G14080 38.400 125 76 1 641 764 613 737 1.37e-15 82.0
MS.gene28580.t1 AT2G14080 31.466 232 140 7 532 756 558 777 2.66e-14 77.8
MS.gene28580.t1 AT2G14080 33.488 215 126 7 557 764 557 761 2.73e-14 77.8
MS.gene28580.t1 AT2G16870 24.023 691 374 34 107 761 164 739 2.42e-18 90.9
MS.gene28580.t1 AT3G04220 38.400 125 76 1 641 764 721 845 9.87e-17 85.5
MS.gene28580.t1 AT3G04220 30.939 181 115 4 589 764 716 891 5.80e-15 79.7
MS.gene28580.t1 AT5G35450 23.044 703 395 26 173 746 183 868 1.01e-16 85.5
MS.gene28580.t1 AT5G35450 23.044 703 395 26 173 746 183 868 1.01e-16 85.5
MS.gene28580.t1 AT3G04220 38.400 125 76 1 641 764 692 816 1.04e-16 85.5
MS.gene28580.t1 AT3G04220 30.939 181 115 4 589 764 687 862 5.99e-15 79.7
MS.gene28580.t1 AT1G27170 24.049 736 437 28 72 764 137 793 1.37e-16 85.5
MS.gene28580.t1 AT1G27170 24.398 664 411 25 144 764 178 793 1.81e-16 85.1
MS.gene28580.t1 AT2G16870 25.319 470 258 24 308 761 73 465 2.46e-16 84.0
MS.gene28580.t1 AT2G16870 25.319 470 258 24 308 761 73 465 2.46e-16 84.0
MS.gene28580.t1 AT1G58410 26.099 364 233 14 155 496 163 512 7.24e-16 82.8
MS.gene28580.t1 AT1G58410 26.099 364 233 14 155 496 163 512 7.24e-16 82.8
MS.gene28580.t1 AT1G58410 26.099 364 233 14 155 496 163 512 7.24e-16 82.8
MS.gene28580.t1 AT5G18350 26.087 460 264 23 307 755 366 760 1.81e-15 81.6
MS.gene28580.t1 AT3G44480 32.973 185 116 5 605 787 730 908 7.29e-15 79.7
MS.gene28580.t1 AT3G44480 27.823 248 143 9 509 755 707 919 1.68e-11 68.6
MS.gene28580.t1 AT3G44480 32.973 185 116 5 605 787 730 908 7.29e-15 79.7
MS.gene28580.t1 AT3G44480 27.823 248 143 9 509 755 707 919 1.68e-11 68.6
MS.gene28580.t1 AT3G44480 32.973 185 116 5 605 787 730 908 7.41e-15 79.7
MS.gene28580.t1 AT3G44480 27.823 248 143 9 509 755 707 919 1.98e-11 68.6
MS.gene28580.t1 AT3G44480 32.973 185 116 5 605 787 730 908 8.33e-15 79.3
MS.gene28580.t1 AT3G44480 27.823 248 143 9 509 755 707 919 1.78e-11 68.6
MS.gene28580.t1 AT3G44480 32.973 185 116 5 605 787 730 908 8.33e-15 79.3
MS.gene28580.t1 AT3G44480 27.823 248 143 9 509 755 707 919 1.78e-11 68.6
MS.gene28580.t1 AT1G58390 25.967 362 237 14 155 496 164 514 8.59e-15 79.3
MS.gene28580.t1 AT1G58390 25.967 362 237 14 155 496 164 514 8.59e-15 79.3
MS.gene28580.t1 AT1G58807 24.077 623 391 25 155 748 164 733 1.33e-14 78.6
MS.gene28580.t1 AT1G59124 24.077 623 391 25 155 748 164 733 1.33e-14 78.6
MS.gene28580.t1 AT1G58807 24.077 623 391 25 155 748 164 733 1.50e-14 78.6
MS.gene28580.t1 AT1G59124 24.077 623 391 25 155 748 164 733 1.50e-14 78.6
MS.gene28580.t1 AT3G44630 29.004 231 129 6 534 761 732 930 8.49e-14 76.3
MS.gene28580.t1 AT3G44630 32.886 149 96 4 641 787 787 933 5.22e-12 70.5
MS.gene28580.t1 AT3G44630 29.004 231 129 6 534 761 732 930 8.49e-14 76.3
MS.gene28580.t1 AT3G44630 32.886 149 96 4 641 787 787 933 5.22e-12 70.5
MS.gene28580.t1 AT3G44630 29.004 231 129 6 534 761 732 930 8.49e-14 76.3
MS.gene28580.t1 AT3G44630 32.886 149 96 4 641 787 787 933 5.22e-12 70.5
MS.gene28580.t1 AT5G41750 23.252 658 373 26 155 759 187 765 9.85e-14 75.9
MS.gene28580.t1 AT5G41750 23.252 658 373 26 155 759 187 765 9.85e-14 75.9
MS.gene28580.t1 AT3G44630 29.004 231 129 6 534 761 732 930 9.89e-14 75.9
MS.gene28580.t1 AT3G44630 32.886 149 96 4 641 787 787 933 6.02e-12 70.1
MS.gene28580.t1 AT3G07040 23.404 658 394 32 155 729 173 803 1.94e-13 74.7
MS.gene28580.t1 AT5G38340 22.239 679 379 30 152 765 229 823 2.01e-13 74.7
MS.gene28580.t1 AT5G38340 22.239 679 379 30 152 765 229 823 2.01e-13 74.7
MS.gene28580.t1 AT1G27180 28.947 228 107 6 587 764 770 992 2.54e-13 74.7
MS.gene28580.t1 AT1G27180 23.328 673 390 22 152 764 198 804 2.89e-13 74.3
MS.gene28580.t1 AT5G38340 22.239 679 379 30 152 765 23 617 2.65e-13 74.3
MS.gene28580.t1 AT4G27220 24.613 581 303 26 180 723 149 631 2.67e-13 74.3
MS.gene28580.t1 AT1G27180 28.947 228 107 6 587 764 932 1154 2.81e-13 74.7
MS.gene28580.t1 AT1G27180 23.328 673 390 22 152 764 360 966 3.51e-13 74.3
MS.gene28580.t1 AT4G19530 23.817 676 391 29 149 766 200 809 3.06e-13 74.3
MS.gene28580.t1 AT1G27180 28.947 228 107 6 587 764 768 990 3.15e-13 74.3
MS.gene28580.t1 AT1G27180 23.328 673 390 22 152 764 196 802 6.18e-13 73.6
MS.gene28580.t1 AT1G27180 28.947 228 107 6 587 764 768 990 3.15e-13 74.3
MS.gene28580.t1 AT1G27180 23.328 673 390 22 152 764 196 802 6.18e-13 73.6
MS.gene28580.t1 AT4G27220 24.613 581 303 26 180 723 141 623 3.18e-13 74.3
MS.gene28580.t1 AT1G27180 28.947 228 107 6 587 764 770 992 3.27e-13 74.3
MS.gene28580.t1 AT1G27180 23.328 673 390 22 152 764 198 804 4.96e-13 73.9
MS.gene28580.t1 AT4G19530 23.817 676 391 29 149 766 200 809 3.36e-13 74.3
MS.gene28580.t1 AT1G59620 26.061 330 227 11 175 492 50 374 4.54e-13 73.6
MS.gene28580.t1 AT1G27180 28.947 228 107 6 587 764 594 816 5.05e-13 73.6
MS.gene28580.t1 AT1G27180 23.328 673 390 22 152 764 22 628 1.14e-12 72.4
MS.gene28580.t1 AT1G27180 28.947 228 107 6 587 764 594 816 5.05e-13 73.6
MS.gene28580.t1 AT1G27180 23.328 673 390 22 152 764 22 628 1.14e-12 72.4
MS.gene28580.t1 AT1G27180 28.947 228 107 6 587 764 594 816 5.05e-13 73.6
MS.gene28580.t1 AT1G27180 23.328 673 390 22 152 764 22 628 1.14e-12 72.4
MS.gene28580.t1 AT3G44670 25.108 462 260 16 347 764 466 885 5.14e-13 73.6
MS.gene28580.t1 AT3G44670 29.258 229 139 7 509 730 709 921 5.50e-12 70.5
MS.gene28580.t1 AT3G44670 25.108 462 260 16 347 764 466 885 5.14e-13 73.6
MS.gene28580.t1 AT3G44670 29.258 229 139 7 509 730 709 921 5.50e-12 70.5
MS.gene28580.t1 AT3G14470 23.693 574 342 29 171 715 194 700 1.96e-12 71.6
MS.gene28580.t1 AT3G14470 23.693 574 342 29 171 715 194 700 1.96e-12 71.6
MS.gene28580.t1 AT1G58400 26.273 373 224 17 155 496 165 517 3.21e-12 70.9
MS.gene28580.t1 AT1G58400 26.273 373 224 17 155 496 165 517 3.21e-12 70.9
MS.gene28580.t1 AT5G43470 25.166 453 292 21 70 496 80 511 3.75e-12 70.9
MS.gene28580.t1 AT5G43470 25.166 453 292 21 70 496 80 511 3.75e-12 70.9
MS.gene28580.t1 AT5G43470 25.166 453 292 21 70 496 80 511 3.75e-12 70.9
MS.gene28580.t1 AT5G43470 25.166 453 292 21 70 496 80 511 3.75e-12 70.9
MS.gene28580.t1 AT1G64070 22.535 639 363 28 152 761 185 720 6.13e-12 70.1
MS.gene28580.t1 AT5G45230 24.622 463 268 18 345 767 406 827 6.71e-12 70.1
MS.gene28580.t1 AT5G17680 27.426 237 108 5 592 764 624 860 7.04e-12 70.1
MS.gene28580.t1 AT5G17680 27.426 237 108 5 592 764 625 861 7.29e-12 70.1
MS.gene28580.t1 AT1G61190 25.065 383 232 17 146 500 148 503 5.78e-11 66.6
MS.gene28580.t1 AT5G48620 24.847 491 297 22 155 620 166 609 6.29e-11 66.6
MS.gene28580.t1 AT5G48620 24.847 491 297 22 155 620 166 609 6.29e-11 66.6
MS.gene28580.t1 AT5G48620 24.847 491 297 22 155 620 166 609 6.29e-11 66.6
MS.gene28580.t1 AT5G48620 24.847 491 297 22 155 620 166 609 6.29e-11 66.6
MS.gene28580.t1 AT5G48620 24.847 491 297 22 155 620 166 609 6.29e-11 66.6
MS.gene28580.t1 AT5G48620 24.847 491 297 22 155 620 166 609 6.29e-11 66.6
MS.gene28580.t1 AT1G61190 25.065 383 232 17 146 500 148 503 7.76e-11 66.2
MS.gene28580.t1 AT1G61190 25.065 383 232 17 146 500 148 503 7.76e-11 66.2
MS.gene28580.t1 AT1G61190 25.065 383 232 17 146 500 148 503 9.31e-11 66.2
MS.gene28580.t1 AT5G49140 23.840 474 270 16 336 768 375 798 9.44e-11 66.2

Find 172 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACAATGTTCTTCAAATT+TGG 0.114126 8.4:-27033984 None:intergenic
ATCCTTTGTTGAGGACTTTA+AGG 0.121412 8.4:+27034151 MS.gene28580:CDS
AGAAGTTTGCTGACCAAAAT+TGG 0.168755 8.4:+27034077 MS.gene28580:CDS
TTGTTTGGACTAGGTAAATT+TGG 0.182402 8.4:+27033927 MS.gene28580:intron
TGGACAACTTTCCCCAATTT+TGG 0.202395 8.4:-27034090 None:intergenic
CGAATGCTGCCCCAAGAAAT+TGG 0.203247 8.4:+27035830 MS.gene28580:CDS
ACATGAAAGCTTTGGATATC+TGG 0.234644 8.4:-27033086 None:intergenic
CACAGTTTACCAGAAGAAAT+TGG 0.243641 8.4:+27035974 MS.gene28580:CDS
ACGCATAAGTCTTCTAGATT+TGG 0.261666 8.4:-27035716 None:intergenic
GAGACTACTAGACGAGAAAT+TGG 0.267325 8.4:+27033173 MS.gene28580:CDS
TTAACTGGTTTGGCTGGATC+TGG 0.271852 8.4:+27033546 MS.gene28580:CDS
CATTGGCCCTTAAATTGATT+GGG 0.290962 8.4:+27034532 MS.gene28580:CDS
CCATTGGCCCTTAAATTGAT+TGG 0.292034 8.4:+27034531 MS.gene28580:CDS
TCATGAGGTTTCCAATTTCT+TGG 0.295130 8.4:-27035841 None:intergenic
TGCAAGTTTCCAATTTCTTC+TGG 0.299070 8.4:-27035983 None:intergenic
TTGATAATTACCAATTATAA+TGG 0.301435 8.4:+27035506 MS.gene28580:CDS
CGCATAAGTCTTCTAGATTT+GGG 0.306347 8.4:-27035715 None:intergenic
CATGAGGTTTCCAATTTCTT+GGG 0.308828 8.4:-27035840 None:intergenic
TGTTTGGACTAGGTAAATTT+GGG 0.310421 8.4:+27033928 MS.gene28580:intron
TTGGTTGGAGGGGCATTTCT+TGG 0.312506 8.4:+27033027 MS.gene28580:CDS
TAAATGCCTGCAAAACGTTT+TGG 0.318693 8.4:+27034650 MS.gene28580:CDS
GTTACTCTTGTTGCATCATT+TGG 0.320673 8.4:-27034299 None:intergenic
CACGGCAAGGGATGTTAAAA+AGG 0.335229 8.4:+27033374 MS.gene28580:CDS
ACAGTGGAAACCATTATAAT+TGG 0.339827 8.4:-27035516 None:intergenic
ATGGTTCCTGTCTGGCTTGA+TGG 0.340724 8.4:-27035155 None:intergenic
ATTTAGTGACACTTCCTTCC+GGG 0.352027 8.4:+27035753 MS.gene28580:CDS
TTTACAACATTGCTCCAATC+TGG 0.357978 8.4:-27035392 None:intergenic
AAGCGACACAGTTTCAATTT+CGG 0.360135 8.4:+27035685 MS.gene28580:CDS
TTGTCCAATGATGTTGGTTC+TGG 0.361207 8.4:+27034106 MS.gene28580:CDS
GGACTTTAAGGTTCAAGTTC+CGG 0.362564 8.4:+27034163 MS.gene28580:CDS
GGTTAACTGACCAGTTGATA+TGG 0.372845 8.4:-27035265 None:intergenic
GAAGTTTGCTGACCAAAATT+GGG 0.379127 8.4:+27034078 MS.gene28580:CDS
CTTTGGCTACGTTGCTCTGT+TGG 0.386158 8.4:+27033577 MS.gene28580:CDS
AACCTTGTCCTTTGTTCGTA+TGG 0.387741 8.4:-27035174 None:intergenic
GCAGGTAGCAAAATGTTGTT+GGG 0.397600 8.4:+27034503 MS.gene28580:intron
GATTTAGTGACACTTCCTTC+CGG 0.401470 8.4:+27035752 MS.gene28580:CDS
TGGTTAATCTTGTAGTTTCA+AGG 0.406951 8.4:+27034850 MS.gene28580:CDS
CAATGTTGTAAAAGTTGAAC+AGG 0.408603 8.4:+27035403 MS.gene28580:CDS
TCAACAAAGGATTCTGAGCC+TGG 0.410852 8.4:-27034140 None:intergenic
GAGGAGATACCAACTTCAAT+TGG 0.412132 8.4:+27035902 MS.gene28580:CDS
TCTCGTTTCGCAAAAGTAAA+GGG 0.412941 8.4:-27035651 None:intergenic
CAACATGAAGGAAGATAGTT+GGG 0.413132 8.4:+27035203 MS.gene28580:CDS
AGAATAGTGAAGTACTAAAC+CGG 0.419413 8.4:-27034223 None:intergenic
ACCTGATCTCACTGTTGGAT+TGG 0.419587 8.4:+27033464 MS.gene28580:CDS
GTAAGGTGAACTTATCAGTA+TGG 0.420752 8.4:-27035448 None:intergenic
CATCTACGTTGTCGTCGTCT+TGG 0.421370 8.4:-27034791 None:intergenic
TACTCAACATGACCTTCTTA+AGG 0.424366 8.4:+27035122 MS.gene28580:CDS
CAAGACGACGACAACGTAGA+TGG 0.426692 8.4:+27034792 MS.gene28580:CDS
CCCAACATTCAGCAGTCTCT+TGG 0.427014 8.4:-27036099 None:intergenic
TCAACATGAAGGAAGATAGT+TGG 0.428621 8.4:+27035202 MS.gene28580:CDS
AATCATCAAGGAGTGCTTCA+TGG 0.430306 8.4:+27034695 MS.gene28580:CDS
TTTGGCTACGTTGCTCTGTT+GGG 0.431664 8.4:+27033578 MS.gene28580:CDS
TGCAGGTAGCAAAATGTTGT+TGG 0.438093 8.4:+27034502 MS.gene28580:intron
TGAGTTAGACAACCTGCATC+TGG 0.441025 8.4:+27034830 MS.gene28580:CDS
AGTCTCATTTCTTCAGCTGC+TGG 0.442177 8.4:-27033156 None:intergenic
CGCACATTGTCCATATCAAC+TGG 0.443976 8.4:+27035255 MS.gene28580:CDS
GTCTCGTTTCGCAAAAGTAA+AGG 0.444822 8.4:-27035652 None:intergenic
ACATTTCCACCATGGGACTT+TGG 0.447038 8.4:-27033268 None:intergenic
TGTGATACTAAGCTTCTTGA+AGG 0.450188 8.4:-27035792 None:intergenic
TACTGTCTATATTGGAAGAT+AGG 0.456750 8.4:+27033397 MS.gene28580:CDS
GTCTATATTGGAAGATAGGC+AGG 0.458180 8.4:+27033401 MS.gene28580:CDS
CTGAAAGAGCTTCACATGAC+TGG 0.458738 8.4:+27036010 MS.gene28580:CDS
TTTCTTTATGCACTCTGGTA+AGG 0.461305 8.4:-27035465 None:intergenic
CTTTATCATAAATTTCTCCT+TGG 0.467868 8.4:-27033308 None:intergenic
CATCGGAGTAACAAGACTAC+TGG 0.468029 8.4:-27033349 None:intergenic
CCAAGAGACTGCTGAATGTT+GGG 0.469297 8.4:+27036099 MS.gene28580:CDS
CTAAGCCTTCCAATTGAAGT+TGG 0.472106 8.4:-27035911 None:intergenic
CTTCTAGAGTTGAGTTTCCC+CGG 0.474542 8.4:+27034204 MS.gene28580:CDS
ATGTTGTTGGGGTTCTCCAT+TGG 0.477234 8.4:+27034515 MS.gene28580:CDS
CAACTCTTCAACTGATTCAA+AGG 0.478448 8.4:-27033492 None:intergenic
TAGTTCCTGTGCCGAGTTGG+AGG 0.478998 8.4:+27035883 MS.gene28580:CDS
TTATCCAGAACCAACATCAT+TGG 0.479107 8.4:-27034110 None:intergenic
TTGTTCGTATGGTTCCTGTC+TGG 0.482064 8.4:-27035163 None:intergenic
CTGCATCATCATCGTCTATG+AGG 0.483771 8.4:-27034043 None:intergenic
TCCAATCCAACAGTGAGATC+AGG 0.484069 8.4:-27033465 None:intergenic
ACATCCCTTGCCGTGTTCAT+CGG 0.485050 8.4:-27033366 None:intergenic
CTTTGAATCAGTTGAAGAGT+TGG 0.487770 8.4:+27033493 MS.gene28580:CDS
TAAGAAGGTCATGTTGAGTA+AGG 0.493602 8.4:-27035119 None:intergenic
GGCAGGAGAGTTGGTTGGAG+GGG 0.493752 8.4:+27033017 MS.gene28580:CDS
TCCAGTTATGGCAGGAGAGT+TGG 0.498100 8.4:+27033008 None:intergenic
ATTGGCCCTTAAATTGATTG+GGG 0.500210 8.4:+27034533 MS.gene28580:CDS
CAACGTAGATGGAATGAACT+TGG 0.500357 8.4:+27034803 MS.gene28580:CDS
TGGATCTGGGAAAACTACTT+TGG 0.503881 8.4:+27033560 MS.gene28580:CDS
AAGGAGTGCTTCATGGACCT+TGG 0.503936 8.4:+27034702 MS.gene28580:CDS
TAACTGGTTTGGCTGGATCT+GGG 0.504770 8.4:+27033547 MS.gene28580:CDS
TTTCTTCTGGTAAACTGTGA+AGG 0.506478 8.4:-27035970 None:intergenic
AGCTATCCATCAAGCCAGAC+AGG 0.507874 8.4:+27035149 MS.gene28580:CDS
ACAAAATGGTGACTCCAGAT+TGG 0.510568 8.4:+27035378 MS.gene28580:CDS
TAATGCAAAGCTACCGAAAA+GGG 0.510945 8.4:-27034276 None:intergenic
CTTGGCGCAGTGGTTCAAGA+AGG 0.511467 8.4:+27033045 MS.gene28580:CDS
TGTTGTTTACCTTGTTTCCA+AGG 0.511586 8.4:+27033291 MS.gene28580:CDS
GTAATGCAAAGCTACCGAAA+AGG 0.512038 8.4:-27034277 None:intergenic
GTAAAACCTGATCTCACTGT+TGG 0.517799 8.4:+27033459 MS.gene28580:CDS
ACTTAGTTCCTGTGCCGAGT+TGG 0.518693 8.4:+27035880 MS.gene28580:CDS
AAAGAAAATGACTAAACTAA+AGG 0.520111 8.4:+27035481 MS.gene28580:CDS
ATGGTGAACTTGTTGTCTAA+AGG 0.520542 8.4:+27034594 MS.gene28580:CDS
ATCTCGACTCTCTTGTGGAT+CGG 0.524607 8.4:+27033127 MS.gene28580:CDS
ACCATCTCTGTTTCTTCCGT+CGG 0.524966 8.4:-27033201 None:intergenic
ATGGCAGGAGAGTTGGTTGG+AGG 0.525607 8.4:+27033015 MS.gene28580:CDS
TAAATTTCTCCTTGGAAACA+AGG 0.530093 8.4:-27033300 None:intergenic
GTTCTGGATAATGTTTGCCC+AGG 0.534134 8.4:+27034122 MS.gene28580:CDS
AGACTACTAGACGAGAAATT+GGG 0.535715 8.4:+27033174 MS.gene28580:CDS
TTGGATATCTGGTTTGTGAC+CGG 0.536248 8.4:-27033075 None:intergenic
GGAACTAATATCACAGAGCC+CGG 0.537989 8.4:-27035771 None:intergenic
CAGTTGAAGAGTTGGTTACT+CGG 0.539104 8.4:+27033501 MS.gene28580:CDS
TTGGCCCTTAAATTGATTGG+GGG 0.539536 8.4:+27034534 MS.gene28580:CDS
TTAATCAATTTGCAAAGTGA+AGG 0.540087 8.4:-27035614 None:intergenic
AAGAGTTGGTTACTCGGTAG+CGG 0.541257 8.4:+27033507 MS.gene28580:CDS
GGAAGGTAATTCAATCATCA+AGG 0.544059 8.4:+27034683 MS.gene28580:CDS
GGTTCAAGAAGGGATGCAAC+CGG 0.545914 8.4:+27033056 MS.gene28580:CDS
CGAGAAATTGGGTCGTCCGA+CGG 0.547343 8.4:+27033185 MS.gene28580:CDS
CATGTTGAGTAAGGAAATAG+TGG 0.547650 8.4:-27035110 None:intergenic
AACAACAACATTTCCACCAT+GGG 0.549819 8.4:-27033275 None:intergenic
ACTCCGTGGACAACCATTTG+CGG 0.550449 8.4:+27034560 MS.gene28580:CDS
CAGACATTGTTTCGACATTG+TGG 0.553173 8.4:+27034005 MS.gene28580:CDS
ATTGGAAGATAGGCAGGAGG+GGG 0.554604 8.4:+27033407 MS.gene28580:CDS
GAATAGTGAAGTACTAAACC+GGG 0.554894 8.4:-27034222 None:intergenic
TGGCAGGAGAGTTGGTTGGA+GGG 0.557176 8.4:+27033016 MS.gene28580:CDS
TTGGCGCAGTGGTTCAAGAA+GGG 0.561357 8.4:+27033046 MS.gene28580:CDS
ACCAAGAGACTGCTGAATGT+TGG 0.561442 8.4:+27036098 MS.gene28580:CDS
CCAATCAATTTAAGGGCCAA+TGG 0.562829 8.4:-27034531 None:intergenic
TACTAGAAGAACTGAAACAA+GGG 0.563892 8.4:+27033223 MS.gene28580:CDS
GGATAGCTATCTCCTTAAGA+AGG 0.564455 8.4:-27035134 None:intergenic
CAACAAAGGATTCTGAGCCT+GGG 0.572518 8.4:-27034139 None:intergenic
TGTCTTCAAAGAATAATCCA+AGG 0.577812 8.4:-27034719 None:intergenic
AGATACCAACTTCAATTGGA+AGG 0.578780 8.4:+27035906 MS.gene28580:CDS
TATCTCCTCCAACTCGGCAC+AGG 0.579106 8.4:-27035888 None:intergenic
GACAGGAACCATACGAACAA+AGG 0.579118 8.4:+27035166 MS.gene28580:CDS
CGACACAGTTTCAATTTCGG+AGG 0.581428 8.4:+27035688 MS.gene28580:CDS
CTAATATCACAGAGCCCGGA+AGG 0.583783 8.4:-27035767 None:intergenic
CTACAAGATTAACCAGATGC+AGG 0.584991 8.4:-27034842 None:intergenic
ATGAGGTTTCCAATTTCTTG+GGG 0.585386 8.4:-27035839 None:intergenic
TGTAAAAGTTGAACAGGTTG+AGG 0.587354 8.4:+27035409 MS.gene28580:CDS
AACCTTAAAGTCCTCAACAA+AGG 0.587647 8.4:-27034153 None:intergenic
TGGCCCTTAAATTGATTGGG+GGG 0.588623 8.4:+27034535 MS.gene28580:CDS
GGAAAGTTGTCCAATGATGT+TGG 0.588978 8.4:+27034100 MS.gene28580:CDS
TTCTGTCCACATGTCAATGA+GGG 0.592088 8.4:-27034760 None:intergenic
AAGTTTGCTGACCAAAATTG+GGG 0.593785 8.4:+27034079 MS.gene28580:CDS
TTACTCCGATGAACACGGCA+AGG 0.595856 8.4:+27033361 MS.gene28580:CDS
TATTGGAAGATAGGCAGGAG+GGG 0.596413 8.4:+27033406 MS.gene28580:CDS
TGGCTGCCCTCATTGACATG+TGG 0.597866 8.4:+27034754 MS.gene28580:CDS
TCAACACTTTCAGACTCATG+AGG 0.599412 8.4:-27035856 None:intergenic
AGGGGCATTTCTTGGCGCAG+TGG 0.600293 8.4:+27033035 MS.gene28580:CDS
GTTATGGCAGGAGAGTTGGT+TGG 0.602932 8.4:+27033012 None:intergenic
AGTTGGTATCTCCTCCAACT+CGG 0.605747 8.4:-27035894 None:intergenic
GTTTGGACTAGGTAAATTTG+GGG 0.613719 8.4:+27033929 MS.gene28580:intron
AGGCTCAGAATCCTTTGTTG+AGG 0.615124 8.4:+27034142 MS.gene28580:CDS
GTTCTGTCCACATGTCAATG+AGG 0.616206 8.4:-27034761 None:intergenic
TCATCATCGTCTATGAGGCA+AGG 0.616299 8.4:-27034038 None:intergenic
CAGGTAGCAAAATGTTGTTG+GGG 0.626019 8.4:+27034504 MS.gene28580:intron
GTGGACAACCATTTGCGGTG+TGG 0.634867 8.4:+27034565 MS.gene28580:CDS
ATATTGGAAGATAGGCAGGA+GGG 0.635875 8.4:+27033405 MS.gene28580:CDS
ATGTCAATGAGGGCAGCCAC+AGG 0.642886 8.4:-27034750 None:intergenic
ACACCGCAAATGGTTGTCCA+CGG 0.646748 8.4:-27034563 None:intergenic
TACTCCGATGAACACGGCAA+GGG 0.647069 8.4:+27033362 MS.gene28580:CDS
GTACTAGAAGAACTGAAACA+AGG 0.648569 8.4:+27033222 MS.gene28580:CDS
AAAGTGAAGGAACTGAAACC+TGG 0.650844 8.4:-27035601 None:intergenic
AAACAACAACATTTCCACCA+TGG 0.654735 8.4:-27033276 None:intergenic
TCTTGTTACTCCGATGAACA+CGG 0.656422 8.4:+27033356 MS.gene28580:CDS
TTGGAAGATAGGCAGGAGGG+GGG 0.662048 8.4:+27033408 MS.gene28580:CDS
TGTTGGGATGACAAAGTCAG+AGG 0.663349 8.4:+27033594 MS.gene28580:CDS
AGGTGAACTTATCAGTATGG+AGG 0.663350 8.4:-27035445 None:intergenic
TCAAGAAGCTTAGTATCACA+AGG 0.663388 8.4:+27035795 MS.gene28580:CDS
ACAAACACTCCAAAGTCCCA+TGG 0.666792 8.4:+27033259 MS.gene28580:CDS
AACCATACGAACAAAGGACA+AGG 0.681274 8.4:+27035172 MS.gene28580:CDS
AACACTCCAAAGTCCCATGG+TGG 0.691787 8.4:+27033262 MS.gene28580:CDS
TCCGACGGAAGAAACAGAGA+TGG 0.696341 8.4:+27033200 MS.gene28580:CDS
TATATTGGAAGATAGGCAGG+AGG 0.700224 8.4:+27033404 MS.gene28580:CDS
AATAGTGAAGTACTAAACCG+GGG 0.717285 8.4:-27034221 None:intergenic
ACTGCGTCATCATCTCTAAG+CGG 0.723554 8.4:-27034251 None:intergenic
AATTGTCTAACTTAGCACAG+TGG 0.725691 8.4:-27035532 None:intergenic
GACATGTGGACAGAACTGAA+CGG 0.747035 8.4:+27034768 MS.gene28580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATAATGACAAAAAGTTT+TGG + chr8.4:27034410-27034429 MS.gene28580:intron 15.0%
!!! TTGATAATTACCAATTATAA+TGG + chr8.4:27035506-27035525 MS.gene28580:CDS 15.0%
!! AAAGAAAATGACTAAACTAA+AGG + chr8.4:27035481-27035500 MS.gene28580:CDS 20.0%
!!! GTTATCAAAATTTTACAATC+CGG - chr8.4:27034185-27034204 None:intergenic 20.0%
!!! TCTATCTACACTTTTTTTTT+TGG + chr8.4:27033637-27033656 MS.gene28580:intron 20.0%
! ACTTGTCATTATGAATGAAT+GGG - chr8.4:27033860-27033879 None:intergenic 25.0%
! AGTTAGTTAGTTAGTTAGTT+AGG - chr8.4:27033763-27033782 None:intergenic 25.0%
! ATAACATTTGCTCATTAATC+AGG + chr8.4:27035055-27035074 MS.gene28580:intron 25.0%
! CTTTATCATAAATTTCTCCT+TGG - chr8.4:27033311-27033330 None:intergenic 25.0%
! GACAAAATGTTAAGACTAAT+GGG - chr8.4:27034371-27034390 None:intergenic 25.0%
! TAACATTTGCTCATTAATCA+GGG + chr8.4:27035056-27035075 MS.gene28580:intron 25.0%
! TGACAAAATGTTAAGACTAA+TGG - chr8.4:27034372-27034391 None:intergenic 25.0%
! TGCAAAAACAACATTTCATT+TGG - chr8.4:27035357-27035376 None:intergenic 25.0%
! TGCTGAAAAATATGTAAAAC+AGG + chr8.4:27034331-27034350 MS.gene28580:CDS 25.0%
! TTAATCAATTTGCAAAGTGA+AGG - chr8.4:27035617-27035636 None:intergenic 25.0%
!! AAGAATCTTATTTGCTTGTT+TGG + chr8.4:27033912-27033931 MS.gene28580:intron 25.0%
!! CATTCTTTTAGTCATACTTA+CGG + chr8.4:27034893-27034912 MS.gene28580:intron 25.0%
!! CTACATTTTCTTGATATATC+AGG + chr8.4:27035938-27035957 MS.gene28580:CDS 25.0%
!!! AATCTGATTTTTCTAAGGTT+TGG - chr8.4:27035578-27035597 None:intergenic 25.0%
!!! ATAATGACAAAAAGTTTTGG+TGG + chr8.4:27034413-27034432 MS.gene28580:intron 25.0%
!!! CAGTTTTATAACAATCATGT+CGG + chr8.4:27034978-27034997 MS.gene28580:intron 25.0%
!!! TAAAAAGGTACTGTCTATAT+TGG + chr8.4:27033389-27033408 MS.gene28580:CDS 25.0%
!!! TGTTTTACATATTTTTCAGC+AGG - chr8.4:27034332-27034351 None:intergenic 25.0%
!!! TTAGACAATTTTGAGTTTCT+TGG + chr8.4:27035545-27035564 MS.gene28580:CDS 25.0%
AAGAGTTATTTATGAAGCAC+CGG - chr8.4:27033739-27033758 None:intergenic 30.0%
ACAGTGGAAACCATTATAAT+TGG - chr8.4:27035519-27035538 None:intergenic 30.0%
CAATGTTGTAAAAGTTGAAC+AGG + chr8.4:27035403-27035422 MS.gene28580:CDS 30.0%
CTTGATATAACAGAGAATCA+AGG + chr8.4:27034937-27034956 MS.gene28580:intron 30.0%
GACTTGTCATTATGAATGAA+TGG - chr8.4:27033861-27033880 None:intergenic 30.0%
TAAATTTCTCCTTGGAAACA+AGG - chr8.4:27033303-27033322 None:intergenic 30.0%
TACTAGAAGAACTGAAACAA+GGG + chr8.4:27033223-27033242 MS.gene28580:CDS 30.0%
TACTGTCTATATTGGAAGAT+AGG + chr8.4:27033397-27033416 MS.gene28580:CDS 30.0%
TGAAGACAAAAAAATACCTG+TGG + chr8.4:27034734-27034753 MS.gene28580:CDS 30.0%
TGCACAATGTTCTTCAAATT+TGG - chr8.4:27033987-27034006 None:intergenic 30.0%
TGGTTAATCTTGTAGTTTCA+AGG + chr8.4:27034850-27034869 MS.gene28580:CDS 30.0%
TGTCTTCAAAGAATAATCCA+AGG - chr8.4:27034722-27034741 None:intergenic 30.0%
! AGAATAGTGAAGTACTAAAC+CGG - chr8.4:27034226-27034245 None:intergenic 30.0%
! CTTAACATTTTGTCACAAAC+AGG + chr8.4:27034377-27034396 MS.gene28580:intron 30.0%
! TCATTATGAATGAATGGGTT+AGG - chr8.4:27033855-27033874 None:intergenic 30.0%
! TGTTTGGACTAGGTAAATTT+GGG + chr8.4:27033928-27033947 MS.gene28580:intron 30.0%
! TTGTTTGGACTAGGTAAATT+TGG + chr8.4:27033927-27033946 MS.gene28580:intron 30.0%
!! AAGGTTGATTTTCAACATGA+AGG + chr8.4:27035191-27035210 MS.gene28580:CDS 30.0%
!! AATCAACTAAGTTAGCTTTG+TGG - chr8.4:27034473-27034492 None:intergenic 30.0%
!!! TGTACTTGTTTTAACTGGTT+TGG + chr8.4:27033536-27033555 MS.gene28580:CDS 30.0%
!!! TGTTGTTTTTGCAGACAAAA+TGG + chr8.4:27035364-27035383 MS.gene28580:intron 30.0%
AAACAACAACATTTCCACCA+TGG - chr8.4:27033279-27033298 None:intergenic 35.0%
AACAACAACATTTCCACCAT+GGG - chr8.4:27033278-27033297 None:intergenic 35.0%
AACCTTAAAGTCCTCAACAA+AGG - chr8.4:27034156-27034175 None:intergenic 35.0%
AAGCGACACAGTTTCAATTT+CGG + chr8.4:27035685-27035704 MS.gene28580:CDS 35.0%
AATTGTCTAACTTAGCACAG+TGG - chr8.4:27035535-27035554 None:intergenic 35.0%
ACGCATAAGTCTTCTAGATT+TGG - chr8.4:27035719-27035738 None:intergenic 35.0%
AGACTACTAGACGAGAAATT+GGG + chr8.4:27033174-27033193 MS.gene28580:CDS 35.0%
AGATACCAACTTCAATTGGA+AGG + chr8.4:27035906-27035925 MS.gene28580:CDS 35.0%
ATCCTTTGTTGAGGACTTTA+AGG + chr8.4:27034151-27034170 MS.gene28580:CDS 35.0%
ATGAGGTTTCCAATTTCTTG+GGG - chr8.4:27035842-27035861 None:intergenic 35.0%
ATTGGCCCTTAAATTGATTG+GGG + chr8.4:27034533-27034552 MS.gene28580:CDS 35.0%
ATTTGCGGTGTGGAAAAAAA+TGG + chr8.4:27034575-27034594 MS.gene28580:CDS 35.0%
CAACATGAAGGAAGATAGTT+GGG + chr8.4:27035203-27035222 MS.gene28580:CDS 35.0%
CACAGTTTACCAGAAGAAAT+TGG + chr8.4:27035974-27035993 MS.gene28580:CDS 35.0%
CATGAGGTTTCCAATTTCTT+GGG - chr8.4:27035843-27035862 None:intergenic 35.0%
CATGTTGAGTAAGGAAATAG+TGG - chr8.4:27035113-27035132 None:intergenic 35.0%
CATTGGCCCTTAAATTGATT+GGG + chr8.4:27034532-27034551 MS.gene28580:CDS 35.0%
CGCATAAGTCTTCTAGATTT+GGG - chr8.4:27035718-27035737 None:intergenic 35.0%
CTAACTAACTTCTGTTGTTG+TGG + chr8.4:27033773-27033792 MS.gene28580:intron 35.0%
CTTATTTGCTTGTTTGGACT+AGG + chr8.4:27033918-27033937 MS.gene28580:intron 35.0%
CTTTGAATCAGTTGAAGAGT+TGG + chr8.4:27033493-27033512 MS.gene28580:CDS 35.0%
GGAAGGTAATTCAATCATCA+AGG + chr8.4:27034683-27034702 MS.gene28580:CDS 35.0%
GTAAGGTGAACTTATCAGTA+TGG - chr8.4:27035451-27035470 None:intergenic 35.0%
GTACTAGAAGAACTGAAACA+AGG + chr8.4:27033222-27033241 MS.gene28580:CDS 35.0%
GTTACTCTTGTTGCATCATT+TGG - chr8.4:27034302-27034321 None:intergenic 35.0%
TAAGAAGGTCATGTTGAGTA+AGG - chr8.4:27035122-27035141 None:intergenic 35.0%
TAATGCAAAGCTACCGAAAA+GGG - chr8.4:27034279-27034298 None:intergenic 35.0%
TACTCAACATGACCTTCTTA+AGG + chr8.4:27035122-27035141 MS.gene28580:CDS 35.0%
TAGAAAAATCAGATTGCACC+AGG + chr8.4:27035583-27035602 MS.gene28580:CDS 35.0%
TCAACATGAAGGAAGATAGT+TGG + chr8.4:27035202-27035221 MS.gene28580:CDS 35.0%
TCAAGAAGCTTAGTATCACA+AGG + chr8.4:27035795-27035814 MS.gene28580:CDS 35.0%
TCATGAGGTTTCCAATTTCT+TGG - chr8.4:27035844-27035863 None:intergenic 35.0%
TCTCGTTTCGCAAAAGTAAA+GGG - chr8.4:27035654-27035673 None:intergenic 35.0%
TGCAAGTTTCCAATTTCTTC+TGG - chr8.4:27035986-27036005 None:intergenic 35.0%
TGTAAAAGTTGAACAGGTTG+AGG + chr8.4:27035409-27035428 MS.gene28580:CDS 35.0%
TGTGATACTAAGCTTCTTGA+AGG - chr8.4:27035795-27035814 None:intergenic 35.0%
TTATCCAGAACCAACATCAT+TGG - chr8.4:27034113-27034132 None:intergenic 35.0%
TTTACAACATTGCTCCAATC+TGG - chr8.4:27035395-27035414 None:intergenic 35.0%
TTTCTTCTGGTAAACTGTGA+AGG - chr8.4:27035973-27035992 None:intergenic 35.0%
TTTCTTTATGCACTCTGGTA+AGG - chr8.4:27035468-27035487 None:intergenic 35.0%
! AATAGTGAAGTACTAAACCG+GGG - chr8.4:27034224-27034243 None:intergenic 35.0%
! CAACTCTTCAACTGATTCAA+AGG - chr8.4:27033495-27033514 None:intergenic 35.0%
! GAATAGTGAAGTACTAAACC+GGG - chr8.4:27034225-27034244 None:intergenic 35.0%
! GGTGCAATCTGATTTTTCTA+AGG - chr8.4:27035583-27035602 None:intergenic 35.0%
! GTTTGGACTAGGTAAATTTG+GGG + chr8.4:27033929-27033948 MS.gene28580:intron 35.0%
! TAAATGCCTGCAAAACGTTT+TGG + chr8.4:27034650-27034669 MS.gene28580:CDS 35.0%
! TGTTGTTTACCTTGTTTCCA+AGG + chr8.4:27033291-27033310 MS.gene28580:CDS 35.0%
!! AAGTTTGCTGACCAAAATTG+GGG + chr8.4:27034079-27034098 MS.gene28580:CDS 35.0%
!! ACATGAAAGCTTTGGATATC+TGG - chr8.4:27033089-27033108 None:intergenic 35.0%
!! AGAAGTTTGCTGACCAAAAT+TGG + chr8.4:27034077-27034096 MS.gene28580:CDS 35.0%
!! ATGGTGAACTTGTTGTCTAA+AGG + chr8.4:27034594-27034613 MS.gene28580:CDS 35.0%
!! GAAGTTTGCTGACCAAAATT+GGG + chr8.4:27034078-27034097 MS.gene28580:CDS 35.0%
!! GTCATTTTCTTTATGCACTC+TGG - chr8.4:27035473-27035492 None:intergenic 35.0%
!! TAAACTCACGAGTTTTGTGA+TGG - chr8.4:27036062-27036081 None:intergenic 35.0%
!!! ATTTTTTTCCACACCGCAAA+TGG - chr8.4:27034576-27034595 None:intergenic 35.0%
!!! GGTTTTGAACATGAAAGCTT+TGG - chr8.4:27033097-27033116 None:intergenic 35.0%
!!! GTGTCTGTACTTGTTTTAAC+TGG + chr8.4:27033531-27033550 MS.gene28580:CDS 35.0%
AAAGTGAAGGAACTGAAACC+TGG - chr8.4:27035604-27035623 None:intergenic 40.0%
AACCATACGAACAAAGGACA+AGG + chr8.4:27035172-27035191 MS.gene28580:CDS 40.0%
AACCTTGTCCTTTGTTCGTA+TGG - chr8.4:27035177-27035196 None:intergenic 40.0%
ACAAAATGGTGACTCCAGAT+TGG + chr8.4:27035378-27035397 MS.gene28580:CDS 40.0%
AGGTGAACTTATCAGTATGG+AGG - chr8.4:27035448-27035467 None:intergenic 40.0%
AGTTGATTGCACTCAATTGC+AGG + chr8.4:27034485-27034504 MS.gene28580:intron 40.0%
ATATTGGAAGATAGGCAGGA+GGG + chr8.4:27033405-27033424 MS.gene28580:CDS 40.0%
ATTTAGTGACACTTCCTTCC+GGG + chr8.4:27035753-27035772 MS.gene28580:CDS 40.0%
CAAAAATCTCGACTCTCTTG+TGG + chr8.4:27033122-27033141 MS.gene28580:CDS 40.0%
CAACGTAGATGGAATGAACT+TGG + chr8.4:27034803-27034822 MS.gene28580:CDS 40.0%
CAGACATTGTTTCGACATTG+TGG + chr8.4:27034005-27034024 MS.gene28580:CDS 40.0%
CAGGTAGCAAAATGTTGTTG+GGG + chr8.4:27034504-27034523 MS.gene28580:intron 40.0%
CCAATCAATTTAAGGGCCAA+TGG - chr8.4:27034534-27034553 None:intergenic 40.0%
CCATTGGCCCTTAAATTGAT+TGG + chr8.4:27034531-27034550 MS.gene28580:CDS 40.0%
CCTCTCAGAGCTAAAAATAG+AGG + chr8.4:27036138-27036157 MS.gene28580:CDS 40.0%
CTAAGCCTTCCAATTGAAGT+TGG - chr8.4:27035914-27035933 None:intergenic 40.0%
CTACAAGATTAACCAGATGC+AGG - chr8.4:27034845-27034864 None:intergenic 40.0%
CTCAGAGCTAAAAATAGAGG+TGG + chr8.4:27036141-27036160 MS.gene28580:CDS 40.0%
GAGACTACTAGACGAGAAAT+TGG + chr8.4:27033173-27033192 MS.gene28580:CDS 40.0%
GAGGAGATACCAACTTCAAT+TGG + chr8.4:27035902-27035921 MS.gene28580:CDS 40.0%
GATTTAGTGACACTTCCTTC+CGG + chr8.4:27035752-27035771 MS.gene28580:CDS 40.0%
GCAGGTAGCAAAATGTTGTT+GGG + chr8.4:27034503-27034522 MS.gene28580:intron 40.0%
GGAAAGTTGTCCAATGATGT+TGG + chr8.4:27034100-27034119 MS.gene28580:CDS 40.0%
GGATAGCTATCTCCTTAAGA+AGG - chr8.4:27035137-27035156 None:intergenic 40.0%
GTAAAACCTGATCTCACTGT+TGG + chr8.4:27033459-27033478 MS.gene28580:CDS 40.0%
GTAATGCAAAGCTACCGAAA+AGG - chr8.4:27034280-27034299 None:intergenic 40.0%
GTCTATATTGGAAGATAGGC+AGG + chr8.4:27033401-27033420 MS.gene28580:CDS 40.0%
GTCTATGTCTATATATGCGC+CGG + chr8.4:27033717-27033736 MS.gene28580:intron 40.0%
GTCTCGTTTCGCAAAAGTAA+AGG - chr8.4:27035655-27035674 None:intergenic 40.0%
TATATTGGAAGATAGGCAGG+AGG + chr8.4:27033404-27033423 MS.gene28580:CDS 40.0%
TCAACACTTTCAGACTCATG+AGG - chr8.4:27035859-27035878 None:intergenic 40.0%
TCTTGTTACTCCGATGAACA+CGG + chr8.4:27033356-27033375 MS.gene28580:CDS 40.0%
TGACCCCCCAATCAATTTAA+GGG - chr8.4:27034541-27034560 None:intergenic 40.0%
TGCAGGTAGCAAAATGTTGT+TGG + chr8.4:27034502-27034521 MS.gene28580:intron 40.0%
TGGATCTGGGAAAACTACTT+TGG + chr8.4:27033560-27033579 MS.gene28580:CDS 40.0%
TTCTGTCCACATGTCAATGA+GGG - chr8.4:27034763-27034782 None:intergenic 40.0%
TTGGCCCTTAAATTGATTGG+GGG + chr8.4:27034534-27034553 MS.gene28580:CDS 40.0%
! ACAGTGAGATCAGGTTTTAC+AGG - chr8.4:27033459-27033478 None:intergenic 40.0%
! CAGTTGAAGAGTTGGTTACT+CGG + chr8.4:27033501-27033520 MS.gene28580:CDS 40.0%
! GGTTAACTGACCAGTTGATA+TGG - chr8.4:27035268-27035287 None:intergenic 40.0%
! TGGACAACTTTCCCCAATTT+TGG - chr8.4:27034093-27034112 None:intergenic 40.0%
! TTGGATATCTGGTTTGTGAC+CGG - chr8.4:27033078-27033097 None:intergenic 40.0%
!! AATCATCAAGGAGTGCTTCA+TGG + chr8.4:27034695-27034714 MS.gene28580:CDS 40.0%
!! GGACTTTAAGGTTCAAGTTC+CGG + chr8.4:27034163-27034182 MS.gene28580:CDS 40.0%
!! TTGTCCAATGATGTTGGTTC+TGG + chr8.4:27034106-27034125 MS.gene28580:CDS 40.0%
!!! AAACGTTTTGGAGGATGCAT+TGG + chr8.4:27034662-27034681 MS.gene28580:CDS 40.0%
!!! ATACGCGTTTTAGAGTAGAG+AGG - chr8.4:27035289-27035308 None:intergenic 40.0%
!!! ATTTTTAGCTCTGAGAGGCT+AGG - chr8.4:27036136-27036155 None:intergenic 40.0%
!!! CCTCTATTTTTAGCTCTGAG+AGG - chr8.4:27036141-27036160 None:intergenic 40.0%
!!! CTTGTTTTAACTGGTTTGGC+TGG + chr8.4:27033540-27033559 MS.gene28580:CDS 40.0%
ACAAACACTCCAAAGTCCCA+TGG + chr8.4:27033259-27033278 MS.gene28580:CDS 45.0%
ACATTTCCACCATGGGACTT+TGG - chr8.4:27033271-27033290 None:intergenic 45.0%
ACCAAGAGACTGCTGAATGT+TGG + chr8.4:27036098-27036117 MS.gene28580:CDS 45.0%
ACCTGATCTCACTGTTGGAT+TGG + chr8.4:27033464-27033483 MS.gene28580:CDS 45.0%
ACTGCGTCATCATCTCTAAG+CGG - chr8.4:27034254-27034273 None:intergenic 45.0%
AGGCTCAGAATCCTTTGTTG+AGG + chr8.4:27034142-27034161 MS.gene28580:CDS 45.0%
AGTCTCATTTCTTCAGCTGC+TGG - chr8.4:27033159-27033178 None:intergenic 45.0%
ATCTCGACTCTCTTGTGGAT+CGG + chr8.4:27033127-27033146 MS.gene28580:CDS 45.0%
ATGTTGTTGGGGTTCTCCAT+TGG + chr8.4:27034515-27034534 MS.gene28580:CDS 45.0%
CAACAAAGGATTCTGAGCCT+GGG - chr8.4:27034142-27034161 None:intergenic 45.0%
CACGGCAAGGGATGTTAAAA+AGG + chr8.4:27033374-27033393 MS.gene28580:CDS 45.0%
CATCGGAGTAACAAGACTAC+TGG - chr8.4:27033352-27033371 None:intergenic 45.0%
CCAAGAGACTGCTGAATGTT+GGG + chr8.4:27036099-27036118 MS.gene28580:CDS 45.0%
CGACACAGTTTCAATTTCGG+AGG + chr8.4:27035688-27035707 MS.gene28580:CDS 45.0%
CGCACATTGTCCATATCAAC+TGG + chr8.4:27035255-27035274 MS.gene28580:CDS 45.0%
CTGAAAGAGCTTCACATGAC+TGG + chr8.4:27036010-27036029 MS.gene28580:CDS 45.0%
CTGCATCATCATCGTCTATG+AGG - chr8.4:27034046-27034065 None:intergenic 45.0%
GACAGGAACCATACGAACAA+AGG + chr8.4:27035166-27035185 MS.gene28580:CDS 45.0%
GACATGTGGACAGAACTGAA+CGG + chr8.4:27034768-27034787 MS.gene28580:CDS 45.0%
GGAACTAATATCACAGAGCC+CGG - chr8.4:27035774-27035793 None:intergenic 45.0%
GTGACCCCCCAATCAATTTA+AGG - chr8.4:27034542-27034561 None:intergenic 45.0%
GTTCTGTCCACATGTCAATG+AGG - chr8.4:27034764-27034783 None:intergenic 45.0%
TATTGGAAGATAGGCAGGAG+GGG + chr8.4:27033406-27033425 MS.gene28580:CDS 45.0%
TCAACAAAGGATTCTGAGCC+TGG - chr8.4:27034143-27034162 None:intergenic 45.0%
TCATCATCGTCTATGAGGCA+AGG - chr8.4:27034041-27034060 None:intergenic 45.0%
TCCAATCCAACAGTGAGATC+AGG - chr8.4:27033468-27033487 None:intergenic 45.0%
TGAGTTAGACAACCTGCATC+TGG + chr8.4:27034830-27034849 MS.gene28580:CDS 45.0%
TGGCCCTTAAATTGATTGGG+GGG + chr8.4:27034535-27034554 MS.gene28580:CDS 45.0%
TGTTGGGATGACAAAGTCAG+AGG + chr8.4:27033594-27033613 MS.gene28580:CDS 45.0%
TTGTTCGTATGGTTCCTGTC+TGG - chr8.4:27035166-27035185 None:intergenic 45.0%
TTTGGCTACGTTGCTCTGTT+GGG + chr8.4:27033578-27033597 MS.gene28580:CDS 45.0%
! AAGAGTTGGTTACTCGGTAG+CGG + chr8.4:27033507-27033526 MS.gene28580:CDS 45.0%
! ACCATCTCTGTTTCTTCCGT+CGG - chr8.4:27033204-27033223 None:intergenic 45.0%
! AGAGTCGAGATTTTTGCGTG+AGG - chr8.4:27033118-27033137 None:intergenic 45.0%
! AGTTGGTATCTCCTCCAACT+CGG - chr8.4:27035897-27035916 None:intergenic 45.0%
! ATGCCTGCAAAACGTTTTGG+AGG + chr8.4:27034653-27034672 MS.gene28580:CDS 45.0%
! CATCCTCCAAAACGTTTTGC+AGG - chr8.4:27034659-27034678 None:intergenic 45.0%
! GATGACGCAGTTACCCTTTT+CGG + chr8.4:27034263-27034282 MS.gene28580:CDS 45.0%
! GTTCTGGATAATGTTTGCCC+AGG + chr8.4:27034122-27034141 MS.gene28580:CDS 45.0%
! TGCGCGCAATTGTATTTTGC+TGG - chr8.4:27035239-27035258 None:intergenic 45.0%
!! CTTCTAGAGTTGAGTTTCCC+CGG + chr8.4:27034204-27034223 MS.gene28580:CDS 45.0%
!! TAACTGGTTTGGCTGGATCT+GGG + chr8.4:27033547-27033566 MS.gene28580:CDS 45.0%
!! TTAACTGGTTTGGCTGGATC+TGG + chr8.4:27033546-27033565 MS.gene28580:CDS 45.0%
!!! ACGAGTTTTGTGATGGACTC+TGG - chr8.4:27036055-27036074 None:intergenic 45.0%
!!! GTTTTGGAGGATGCATTGGA+AGG + chr8.4:27034666-27034685 MS.gene28580:CDS 45.0%
!! TTAATATAAAGATTATATTA+TGG + chr8.4:27035018-27035037 MS.gene28580:intron 5.0%
AACACTCCAAAGTCCCATGG+TGG + chr8.4:27033262-27033281 MS.gene28580:CDS 50.0%
ACACCGCAAATGGTTGTCCA+CGG - chr8.4:27034566-27034585 None:intergenic 50.0%
ACATCCCTTGCCGTGTTCAT+CGG - chr8.4:27033369-27033388 None:intergenic 50.0%
ACTCCGTGGACAACCATTTG+CGG + chr8.4:27034560-27034579 MS.gene28580:CDS 50.0%
ACTTAGTTCCTGTGCCGAGT+TGG + chr8.4:27035880-27035899 MS.gene28580:CDS 50.0%
AGCTATCCATCAAGCCAGAC+AGG + chr8.4:27035149-27035168 MS.gene28580:CDS 50.0%
ATTGGAAGATAGGCAGGAGG+GGG + chr8.4:27033407-27033426 MS.gene28580:CDS 50.0%
CAAGACGACGACAACGTAGA+TGG + chr8.4:27034792-27034811 MS.gene28580:CDS 50.0%
CATCTACGTTGTCGTCGTCT+TGG - chr8.4:27034794-27034813 None:intergenic 50.0%
CCCAACATTCAGCAGTCTCT+TGG - chr8.4:27036102-27036121 None:intergenic 50.0%
CGAATGCTGCCCCAAGAAAT+TGG + chr8.4:27035830-27035849 MS.gene28580:CDS 50.0%
CTAATATCACAGAGCCCGGA+AGG - chr8.4:27035770-27035789 None:intergenic 50.0%
CTTTGGCTACGTTGCTCTGT+TGG + chr8.4:27033577-27033596 MS.gene28580:CDS 50.0%
GGTTCAAGAAGGGATGCAAC+CGG + chr8.4:27033056-27033075 MS.gene28580:CDS 50.0%
TACTCCGATGAACACGGCAA+GGG + chr8.4:27033362-27033381 MS.gene28580:CDS 50.0%
TCCGACGGAAGAAACAGAGA+TGG + chr8.4:27033200-27033219 MS.gene28580:CDS 50.0%
TTACTCCGATGAACACGGCA+AGG + chr8.4:27033361-27033380 MS.gene28580:CDS 50.0%
TTGGCGCAGTGGTTCAAGAA+GGG + chr8.4:27033046-27033065 MS.gene28580:CDS 50.0%
! ATGGTTCCTGTCTGGCTTGA+TGG - chr8.4:27035158-27035177 None:intergenic 50.0%
!! AAGGAGTGCTTCATGGACCT+TGG + chr8.4:27034702-27034721 MS.gene28580:CDS 50.0%
!! TTGGTTGGAGGGGCATTTCT+TGG + chr8.4:27033027-27033046 MS.gene28580:CDS 50.0%
ATGTCAATGAGGGCAGCCAC+AGG - chr8.4:27034753-27034772 None:intergenic 55.0%
CGAGAAATTGGGTCGTCCGA+CGG + chr8.4:27033185-27033204 MS.gene28580:CDS 55.0%
CTTGGCGCAGTGGTTCAAGA+AGG + chr8.4:27033045-27033064 MS.gene28580:CDS 55.0%
GTGGACAACCATTTGCGGTG+TGG + chr8.4:27034565-27034584 MS.gene28580:CDS 55.0%
TATCTCCTCCAACTCGGCAC+AGG - chr8.4:27035891-27035910 None:intergenic 55.0%
TGGCTGCCCTCATTGACATG+TGG + chr8.4:27034754-27034773 MS.gene28580:CDS 55.0%
TTGGAAGATAGGCAGGAGGG+GGG + chr8.4:27033408-27033427 MS.gene28580:CDS 55.0%
! ATGGCAGGAGAGTTGGTTGG+AGG + chr8.4:27033015-27033034 MS.gene28580:CDS 55.0%
! TAGTTCCTGTGCCGAGTTGG+AGG + chr8.4:27035883-27035902 MS.gene28580:CDS 55.0%
! TGGCAGGAGAGTTGGTTGGA+GGG + chr8.4:27033016-27033035 MS.gene28580:CDS 55.0%
TTGATTGGGGGGTCACTCCG+TGG + chr8.4:27034546-27034565 MS.gene28580:CDS 60.0%
! GGCAGGAGAGTTGGTTGGAG+GGG + chr8.4:27033017-27033036 MS.gene28580:CDS 60.0%
!! AGGGGCATTTCTTGGCGCAG+TGG + chr8.4:27033035-27033054 MS.gene28580:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 27033015 27036192 27033015 ID=MS.gene28580
chr8.4 mRNA 27033015 27036192 27033015 ID=MS.gene28580.t1;Parent=MS.gene28580
chr8.4 exon 27033015 27033615 27033015 ID=MS.gene28580.t1.exon1;Parent=MS.gene28580.t1
chr8.4 CDS 27033015 27033615 27033015 ID=cds.MS.gene28580.t1;Parent=MS.gene28580.t1
chr8.4 exon 27033940 27034352 27033940 ID=MS.gene28580.t1.exon2;Parent=MS.gene28580.t1
chr8.4 CDS 27033940 27034352 27033940 ID=cds.MS.gene28580.t1;Parent=MS.gene28580.t1
chr8.4 exon 27034507 27034871 27034507 ID=MS.gene28580.t1.exon3;Parent=MS.gene28580.t1
chr8.4 CDS 27034507 27034871 27034507 ID=cds.MS.gene28580.t1;Parent=MS.gene28580.t1
chr8.4 exon 27035077 27035276 27035077 ID=MS.gene28580.t1.exon4;Parent=MS.gene28580.t1
chr8.4 CDS 27035077 27035276 27035077 ID=cds.MS.gene28580.t1;Parent=MS.gene28580.t1
chr8.4 exon 27035378 27036192 27035378 ID=MS.gene28580.t1.exon5;Parent=MS.gene28580.t1
chr8.4 CDS 27035378 27036192 27035378 ID=cds.MS.gene28580.t1;Parent=MS.gene28580.t1
Gene Sequence

>MS.gene28580

ATGGCAGGAGAGTTGGTTGGAGGGGCATTTCTTGGCGCAGTGGTTCAAGAAGGGATGCAACCGGTCACAAACCAGATATCCAAAGCTTTCATGTTCAAAACCTCACGCAAAAATCTCGACTCTCTTGTGGATCGGATCACACCAGCAGCTGAAGAAATGAGACTACTAGACGAGAAATTGGGTCGTCCGACGGAAGAAACAGAGATGGTACTAGAAGAACTGAAACAAGGGAAAGATGCAGTAAACAAACACTCCAAAGTCCCATGGTGGAAATGTTGTTGTTTACCTTGTTTCCAAGGAGAAATTTATGATAAAGAAGAGAAAATTGCTAGATCCAGTAGTCTTGTTACTCCGATGAACACGGCAAGGGATGTTAAAAAGGTACTGTCTATATTGGAAGATAGGCAGGAGGGGGGACAATTCAAGAGCTTATGTGATGCTCCTGTAAAACCTGATCTCACTGTTGGATTGGATTTTCCTTTGAATCAGTTGAAGAGTTGGTTACTCGGTAGCGGTGTGTCTGTACTTGTTTTAACTGGTTTGGCTGGATCTGGGAAAACTACTTTGGCTACGTTGCTCTGTTGGGATGACAAAGTCAGAGGTAACACACATAATATAACTCTCTATCTACACTTTTTTTTTTGGTAGTGCTACACTTTTTATTTGAAGCGTGTATATATGTGTGTCAAGATTGTGTCAGATGTCTATGTCTATATATGCGCCGGTGCTTCATAAATAACTCTTACCTAACTAACTAACTAACTAACTTCTGTTGTTGTGGAGACTTCAATAACTCTGATATTGCTGCTCAAAATGTAATTGTACACTTTTCTGAAACCTAACCCATTCATTCATAATGACAAGTCTTTTTTGCAAACGACGTGAAACATGATATTTAAGAATCTTATTTGCTTGTTTGGACTAGGTAAATTTGGGGAAAATATACTGTTCTTCACTGTGTCAAAAACTCCAAATTTGAAGAACATTGTGCAGACATTGTTTCGACATTGTGGACATGATGAGCCTTGCCTCATAGACGATGATGATGCAGTTAAACACTTGAGAAGTTTGCTGACCAAAATTGGGGAAAGTTGTCCAATGATGTTGGTTCTGGATAATGTTTGCCCAGGCTCAGAATCCTTTGTTGAGGACTTTAAGGTTCAAGTTCCGGATTGTAAAATTTTGATAACTTCTAGAGTTGAGTTTCCCCGGTTTAGTACTTCACTATTCTTAAAGCCGCTTAGAGATGATGACGCAGTTACCCTTTTCGGTAGCTTTGCATTACCAAATGATGCAACAAGAGTAACTTATGTTCCTGCTGAAAAATATGTAAAACAGGTTTGTTATATTCATCCCATTAGTCTTAACATTTTGTCACAAACAGGTTTGTTTTCTTATATAATGACAAAAAGTTTTGGTGGTTTACTTATACTAAAATTGTCAATATGATCAAAACCACAAAGCTAACTTAGTTGATTGCACTCAATTGCAGGTAGCAAAATGTTGTTGGGGTTCTCCATTGGCCCTTAAATTGATTGGGGGGTCACTCCGTGGACAACCATTTGCGGTGTGGAAAAAAATGGTGAACTTGTTGTCTAAAGGTCGTTCTATTGTTGATTCTAATGATGAGTTGCGTAAATGCCTGCAAAACGTTTTGGAGGATGCATTGGAAGGTAATTCAATCATCAAGGAGTGCTTCATGGACCTTGGATTATTCTTTGAAGACAAAAAAATACCTGTGGCTGCCCTCATTGACATGTGGACAGAACTGAACGGCCAAGACGACGACAACGTAGATGGAATGAACTTGGTTCATGAGTTAGACAACCTGCATCTGGTTAATCTTGTAGTTTCAAGGTACATTAACTAGCTACTTTTCATTCTTTTAGTCATACTTACGGTTTTTATTTGATGTTGCAATTCTTGATATAACAGAGAATCAAGGTTAAAAATTGTTGAATCACAGTTTTATAACAATCATGTCGGTCAAGAAACAGAAAATGTTAATATAAAGATTATATTATGGTTATGTATATACTTATAACATTTGCTCATTAATCAGGGAAGTGACAAGTCACGTTGATAATTACTACAACCACTATTTCCTTACTCAACATGACCTTCTTAAGGAGATAGCTATCCATCAAGCCAGACAGGAACCATACGAACAAAGGACAAGGTTGATTTTCAACATGAAGGAAGATAGTTGGGATCAACAGAACCAGCAAAATACAATTGCGCGCACATTGTCCATATCAACTGGTCAGTTAACCTCTCTACTCTAAAACGCGTATACAATTGCACACACTGACACATATCTACTATTTTCACTCTTGACACCAAATGAAATGTTGTTTTTGCAGACAAAATGGTGACTCCAGATTGGAGCAATGTTGTAAAAGTTGAACAGGTTGAGGTGCTGATCTTGAACCTCCATACTGATAAGTTCACCTTACCAGAGTGCATAAAGAAAATGACTAAACTAAAGGTTTTGATAATTACCAATTATAATGGTTTCCACTGTGCTAAGTTAGACAATTTTGAGTTTCTTGGTTGTCTACCAAACCTTAGAAAAATCAGATTGCACCAGGTTTCAGTTCCTTCACTTTGCAAATTGATTAATCTGCGAAAATTGTCCCTTTACTTTTGCGAAACGAGACAAGCTTTTCAAAGCGACACAGTTTCAATTTCGGAGGTACTCCCAAATCTAGAAGACTTATGCGTTGATTATTGCAAAGATTTAGTGACACTTCCTTCCGGGCTCTGTGATATTAGTTCCTTCAAGAAGCTTAGTATCACAAGGTGTATTGCTTTTCGAATGCTGCCCCAAGAAATTGGAAACCTCATGAGTCTGAAAGTGTTGAGACTTAGTTCCTGTGCCGAGTTGGAGGAGATACCAACTTCAATTGGAAGGCTTAGTGAGCTACATTTTCTTGATATATCAGGTTGCGCAAGCCTTCACAGTTTACCAGAAGAAATTGGAAACTTGCATAATCTGAAAGAGCTTCACATGACTGGTTTCTCATCACACACACTGCCAGAGTCCATCACAAAACTCGTGAGTTTAGAGCATTTAATATGTGACCAAGAGACTGCTGAATGTTGGGAGCATTTCAAGCCTAGCCTCTCAGAGCTAAAAATAGAGGTGGCTAAAGTTAACTTATTCATTATTGTATGA
Protein sequence

>MS.gene28580.t1

MAGELVGGAFLGAVVQEGMQPVTNQISKAFMFKTSRKNLDSLVDRITPAAEEMRLLDEKLGRPTEETEMVLEELKQGKDAVNKHSKVPWWKCCCLPCFQGEIYDKEEKIARSSSLVTPMNTARDVKKVLSILEDRQEGGQFKSLCDAPVKPDLTVGLDFPLNQLKSWLLGSGVSVLVLTGLAGSGKTTLATLLCWDDKVRGKFGENILFFTVSKTPNLKNIVQTLFRHCGHDEPCLIDDDDAVKHLRSLLTKIGESCPMMLVLDNVCPGSESFVEDFKVQVPDCKILITSRVEFPRFSTSLFLKPLRDDDAVTLFGSFALPNDATRVTYVPAEKYVKQVAKCCWGSPLALKLIGGSLRGQPFAVWKKMVNLLSKGRSIVDSNDELRKCLQNVLEDALEGNSIIKECFMDLGLFFEDKKIPVAALIDMWTELNGQDDDNVDGMNLVHELDNLHLVNLVVSREVTSHVDNYYNHYFLTQHDLLKEIAIHQARQEPYEQRTRLIFNMKEDSWDQQNQQNTIARTLSISTDKMVTPDWSNVVKVEQVEVLILNLHTDKFTLPECIKKMTKLKVLIITNYNGFHCAKLDNFEFLGCLPNLRKIRLHQVSVPSLCKLINLRKLSLYFCETRQAFQSDTVSISEVLPNLEDLCVDYCKDLVTLPSGLCDISSFKKLSITRCIAFRMLPQEIGNLMSLKVLRLSSCAELEEIPTSIGRLSELHFLDISGCASLHSLPEEIGNLHNLKELHMTGFSSHTLPESITKLVSLEHLICDQETAECWEHFKPSLSELKIEVAKVNLFIIV