Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28653.t1 | XP_003626029.2 | 96.1 | 778 | 23 | 2 | 22 | 792 | 49 | 826 | 0.00E+00 | 1433.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28653.t1 | Q76PD2 | 30.4 | 349 | 198 | 12 | 106 | 441 | 188 | 504 | 5.7e-27 | 124.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28653.t1 | G7KTR7 | 96.1 | 778 | 23 | 2 | 22 | 792 | 49 | 826 | 0.0e+00 | 1433.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050084 | MS.gene28653 | 0.806687 | 7.29E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene28653 | 0.806408 | 8.35E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene28653 | 0.814524 | 1.47E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28653.t1 | MTR_7g110170 | 96.272 | 778 | 22 | 2 | 22 | 792 | 49 | 826 | 0.0 | 1558 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28653.t1 | AT3G62240 | 51.244 | 804 | 304 | 15 | 24 | 787 | 53 | 808 | 0.0 | 743 |
| MS.gene28653.t1 | AT2G47090 | 41.266 | 790 | 365 | 18 | 24 | 791 | 53 | 765 | 4.09e-175 | 523 |
| MS.gene28653.t1 | AT2G47090 | 40.380 | 790 | 365 | 19 | 24 | 791 | 53 | 758 | 2.03e-166 | 500 |
| MS.gene28653.t1 | AT2G47090 | 39.367 | 790 | 357 | 19 | 24 | 791 | 53 | 742 | 9.42e-156 | 472 |
| MS.gene28653.t1 | AT2G47090 | 39.086 | 788 | 341 | 18 | 24 | 791 | 53 | 721 | 5.76e-155 | 469 |
| MS.gene28653.t1 | AT2G47090 | 68.924 | 251 | 75 | 2 | 24 | 271 | 53 | 303 | 3.02e-125 | 392 |
Find 189 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAAATGACGGGGTTTA+TGG | 0.195895 | 7.2:-4985456 | MS.gene28653:CDS |
| AATGGTAACAATAATGATTC+TGG | 0.227254 | 7.2:-4984985 | MS.gene28653:CDS |
| AGTTCATTGTCCCCATAAAA+TGG | 0.259485 | 7.2:+4987329 | None:intergenic |
| TGCTTATGTGTTGATTCAAC+TGG | 0.263698 | 7.2:+4987432 | None:intergenic |
| TCTTCCTTTCCTCCACTTCC+TGG | 0.267843 | 7.2:-4986182 | MS.gene28653:CDS |
| AATGTATCTGTAATTAATTC+TGG | 0.268574 | 7.2:-4986080 | MS.gene28653:CDS |
| CTCACTTGTGCCGCAGAAAC+TGG | 0.285371 | 7.2:+4985777 | None:intergenic |
| GGAACAACGGACAGTTTAAA+TGG | 0.311619 | 7.2:-4985003 | MS.gene28653:CDS |
| CGACAAAGGTTTAGGAATAT+AGG | 0.326957 | 7.2:-4987659 | MS.gene28653:CDS |
| ACAACAAAGTCTCAAAATTC+TGG | 0.329736 | 7.2:-4986002 | MS.gene28653:CDS |
| GTTCAAGGCGACAAAGGTTT+AGG | 0.329883 | 7.2:-4987667 | MS.gene28653:CDS |
| TCAAGATACCGTCAGGCCTT+AGG | 0.347682 | 7.2:-4986230 | MS.gene28653:CDS |
| TCGGAAGCAGAGAGAACTTT+TGG | 0.358351 | 7.2:-4985514 | MS.gene28653:CDS |
| CACATAAGAAATGTTGTTGT+CGG | 0.363908 | 7.2:+4986982 | None:intergenic |
| CTTTCCTCCACTTCCTGGCC+AGG | 0.366839 | 7.2:-4986177 | MS.gene28653:CDS |
| TCTCTCTGCTTCCGAGCATC+CGG | 0.369430 | 7.2:+4985522 | None:intergenic |
| CAGTTTATCTAATCAAAATA+AGG | 0.369601 | 7.2:-4985148 | MS.gene28653:CDS |
| AACAATAATGATTCTGGAGT+TGG | 0.372582 | 7.2:-4984979 | MS.gene28653:CDS |
| CATGGCCATTGAAGCCAGTC+TGG | 0.380286 | 7.2:-4986390 | MS.gene28653:CDS |
| GTTCATTGTCCCCATAAAAT+GGG | 0.391907 | 7.2:+4987330 | None:intergenic |
| GGTGTATACTGTCAGGCTCT+TGG | 0.397402 | 7.2:-4987881 | MS.gene28653:intron |
| GCATATGTGCAGTTTGTGTT+TGG | 0.399812 | 7.2:-4987600 | MS.gene28653:CDS |
| GACAAAGGTTTAGGAATATA+GGG | 0.400686 | 7.2:-4987658 | MS.gene28653:CDS |
| TGAACCTTCAGACTCGTGTT+TGG | 0.406166 | 7.2:+4986148 | None:intergenic |
| AAAGCGTAATGCTGCTCTTC+AGG | 0.411058 | 7.2:-4986649 | MS.gene28653:intron |
| TTTAAACTGTCCGTTGTTCC+AGG | 0.413101 | 7.2:+4985006 | None:intergenic |
| AAGGTAAGTCATTAGATGTT+AGG | 0.416037 | 7.2:-4985386 | MS.gene28653:CDS |
| GTACGAGGTGTTTGGCGAAA+GGG | 0.419262 | 7.2:-4984949 | MS.gene28653:CDS |
| GGCTGCCTGTACGAGGTGTT+TGG | 0.421031 | 7.2:-4984957 | MS.gene28653:CDS |
| CTTTAATTGCAGGCAGCACC+CGG | 0.423152 | 7.2:-4987168 | MS.gene28653:intron |
| CAAGATACCGTCAGGCCTTA+GGG | 0.429255 | 7.2:-4986229 | MS.gene28653:CDS |
| AGAAATGTTGTTGTCGGAAG+TGG | 0.432266 | 7.2:+4986988 | None:intergenic |
| TCAGAAATTGAAACTCCAAC+AGG | 0.437868 | 7.2:+4985807 | None:intergenic |
| TCAATCTGAATCAGAGATGA+AGG | 0.441203 | 7.2:-4986922 | MS.gene28653:intron |
| GTTTCATCTTGTACCTGAGC+TGG | 0.443738 | 7.2:-4985556 | MS.gene28653:CDS |
| GTGAGCCAACTTCAAGTAAT+GGG | 0.445956 | 7.2:-4986340 | MS.gene28653:CDS |
| CTCAGAGTGCGCCTTGGTGA+TGG | 0.448748 | 7.2:-4985078 | MS.gene28653:CDS |
| TGTTAATTACTGTCTTCATC+TGG | 0.454941 | 7.2:+4985979 | None:intergenic |
| CATGTTCACCAAGTCACAAA+TGG | 0.456090 | 7.2:+4988090 | None:intergenic |
| CAGGATCAGCGCCGTGGAAG+AGG | 0.456242 | 7.2:-4986452 | MS.gene28653:CDS |
| TTTGTGTTTGGAGGGAAGGA+AGG | 0.462491 | 7.2:-4987588 | MS.gene28653:intron |
| TCAAGGACCACTTCTGATCC+TGG | 0.464866 | 7.2:-4985024 | MS.gene28653:CDS |
| AGTCTCCAGACTGGCTTCAA+TGG | 0.471247 | 7.2:+4986385 | None:intergenic |
| CTTCTCTCACCTCAGACGGC+AGG | 0.474593 | 7.2:+4987825 | None:intergenic |
| AGCGGAGGCTGGCTACTTGT+AGG | 0.475176 | 7.2:+4985747 | None:intergenic |
| TAAACCTTCAGAAGAGAAGT+TGG | 0.476136 | 7.2:-4985295 | MS.gene28653:CDS |
| AAGGCGCACTCTGAGGAACT+TGG | 0.478049 | 7.2:+4985086 | None:intergenic |
| ATTGGCCCATTACTTGAAGT+TGG | 0.479995 | 7.2:+4986335 | None:intergenic |
| AATGATCACGACGAAATGTC+CGG | 0.484850 | 7.2:+4986429 | None:intergenic |
| TCTCCGTCATCATAAGCAAT+TGG | 0.486938 | 7.2:+4986317 | None:intergenic |
| TTATAGTATTCAAATTGTCC+CGG | 0.487329 | 7.2:+4987149 | None:intergenic |
| ACAATAATGATTCTGGAGTT+GGG | 0.488582 | 7.2:-4984978 | MS.gene28653:CDS |
| TTCTGAAAATCAACTTTCCA+TGG | 0.491694 | 7.2:-4986408 | MS.gene28653:CDS |
| TCTAATCAAAATAAGGAGGA+TGG | 0.493564 | 7.2:-4985141 | MS.gene28653:CDS |
| TCTCCACATTCAGCGGAGGC+TGG | 0.494500 | 7.2:+4985736 | None:intergenic |
| CCTTGGTGATGGTTCTGCTT+CGG | 0.495622 | 7.2:-4985067 | MS.gene28653:CDS |
| ACCTCCAACTTCTCTTCTGA+AGG | 0.497647 | 7.2:+4985291 | None:intergenic |
| AGCAACAAAATGATGGTTCA+AGG | 0.497984 | 7.2:-4987682 | MS.gene28653:CDS |
| TGTACGAGGTGTTTGGCGAA+AGG | 0.499209 | 7.2:-4984950 | MS.gene28653:CDS |
| ATATAGACACAATAATGAAC+AGG | 0.501473 | 7.2:-4986471 | MS.gene28653:CDS |
| ACACTTTCCAAGAAAATGAC+GGG | 0.501766 | 7.2:-4985464 | MS.gene28653:CDS |
| CTAATCAAAATAAGGAGGAT+GGG | 0.502336 | 7.2:-4985140 | MS.gene28653:CDS |
| GTGGACTGTGTGCAGCAGTT+TGG | 0.503287 | 7.2:-4985582 | MS.gene28653:CDS |
| CGTGAGCCAACTTCAAGTAA+TGG | 0.503834 | 7.2:-4986341 | MS.gene28653:CDS |
| CTAGAGTTTGTTTGAATCTG+CGG | 0.504344 | 7.2:+4985219 | None:intergenic |
| TTAGATTGCGAAGGTTGTAC+AGG | 0.504697 | 7.2:+4986029 | None:intergenic |
| TCAGTCTGCCAACAAGTCCT+TGG | 0.512432 | 7.2:-4985709 | MS.gene28653:CDS |
| TTGTCACGTGTGTCCTTCGA+TGG | 0.515439 | 7.2:+4985879 | None:intergenic |
| AAACAATAAATTTCTTGGCA+AGG | 0.518069 | 7.2:+4986946 | None:intergenic |
| CAAGACTATGCCCGGATGCT+CGG | 0.518385 | 7.2:-4985533 | MS.gene28653:CDS |
| CAGACTGGCTTCAATGGCCA+TGG | 0.519930 | 7.2:+4986391 | None:intergenic |
| GGGCATAGTCTTGCCAGCTC+AGG | 0.520862 | 7.2:+4985543 | None:intergenic |
| AGGGCATAGCTCTAGACCTC+TGG | 0.522733 | 7.2:-4986210 | MS.gene28653:CDS |
| CTCTCTGCTTCCGAGCATCC+GGG | 0.523316 | 7.2:+4985523 | None:intergenic |
| TAATCAAAATAAGGAGGATG+GGG | 0.524367 | 7.2:-4985139 | MS.gene28653:CDS |
| CCGACGTAAACGTGCGGCCA+TGG | 0.525256 | 7.2:+4986115 | None:intergenic |
| GAATTAGCAAAACTTGATGC+TGG | 0.526095 | 7.2:+4985948 | None:intergenic |
| GAACTATTCCATTTGTGACT+TGG | 0.529009 | 7.2:-4988098 | MS.gene28653:CDS |
| AGCATTAGCAGTCTCCAGAC+TGG | 0.530094 | 7.2:+4986376 | None:intergenic |
| AACATAAGACTAAGCTTGGT+GGG | 0.530293 | 7.2:-4985191 | MS.gene28653:CDS |
| GAGGTGAGAGAAGGGAAGGT+TGG | 0.531087 | 7.2:-4987815 | MS.gene28653:CDS |
| GAAGTTGGAGGTGCTATCAA+AGG | 0.531226 | 7.2:-4985280 | MS.gene28653:CDS |
| AAGGGAAGGTTGGACCGTAC+TGG | 0.531331 | 7.2:-4987805 | MS.gene28653:CDS |
| AGTCAACATAAGACTAAGCT+TGG | 0.534231 | 7.2:-4985195 | MS.gene28653:CDS |
| AATGTCGACAAGAAAGGTAA+AGG | 0.536933 | 7.2:-4985405 | MS.gene28653:CDS |
| GCAGTAGCTAATGATTCAAA+CGG | 0.538134 | 7.2:+4986269 | None:intergenic |
| GCAGTTTGTGTTTGGAGGGA+AGG | 0.538351 | 7.2:-4987592 | MS.gene28653:CDS |
| CTCGTTGAAAACAACCCTGT+TGG | 0.539026 | 7.2:-4985822 | MS.gene28653:CDS |
| TTCTCTCACCTCAGACGGCA+GGG | 0.540888 | 7.2:+4987826 | None:intergenic |
| CACTTCTGATCCTGGAACAA+CGG | 0.541415 | 7.2:-4985016 | MS.gene28653:CDS |
| TACGAGGTGTTTGGCGAAAG+GGG | 0.542527 | 7.2:-4984948 | MS.gene28653:CDS |
| ATCAGCGCCGTGGAAGAGGC+CGG | 0.543191 | 7.2:-4986448 | MS.gene28653:CDS |
| TATGTGCAGTTTGTGTTTGG+AGG | 0.543683 | 7.2:-4987597 | MS.gene28653:CDS |
| ATCAACTTCAAGATACCGTC+AGG | 0.546666 | 7.2:-4986237 | MS.gene28653:CDS |
| GGGCAGACTGAAACTTCAAA+TGG | 0.546857 | 7.2:-4985171 | MS.gene28653:CDS |
| CTGCCGTCTGAGGTGAGAGA+AGG | 0.547053 | 7.2:-4987824 | MS.gene28653:CDS |
| ATCGAGGAGCAACAAAATGA+TGG | 0.547275 | 7.2:-4987689 | MS.gene28653:CDS |
| TAATTAATTCTGGAAATGCC+TGG | 0.547869 | 7.2:-4986070 | MS.gene28653:CDS |
| TAGCCTTGATCATCTTGTAA+TGG | 0.548155 | 7.2:+4987744 | None:intergenic |
| GATAGATACTGATGCATATG+TGG | 0.548437 | 7.2:-4985601 | MS.gene28653:CDS |
| CATTTGTGACTTGGTGAACA+TGG | 0.549337 | 7.2:-4988089 | MS.gene28653:intron |
| TGAGCTGGCAAGACTATGCC+CGG | 0.549756 | 7.2:-4985541 | MS.gene28653:CDS |
| GAAATGTCCGGCCTCTTCCA+CGG | 0.552472 | 7.2:+4986441 | None:intergenic |
| AGACATAATGCTACGGAACA+TGG | 0.555987 | 7.2:-4986690 | MS.gene28653:CDS |
| GTGTCCTTCGATGGACCAGC+AGG | 0.556123 | 7.2:+4985888 | None:intergenic |
| TGCACATATGCAACTTATGA+CGG | 0.557493 | 7.2:+4987612 | None:intergenic |
| TAGCCAGCCTCCGCTGAATG+TGG | 0.558724 | 7.2:-4985739 | MS.gene28653:CDS |
| GGTGCTTATCGCACCGACAA+AGG | 0.559739 | 7.2:-4985258 | MS.gene28653:CDS |
| CAGCGCTAGCACCCATCGCA+AGG | 0.559993 | 7.2:-4985433 | MS.gene28653:CDS |
| CATCAGTATCTATCGTGCCT+TGG | 0.562624 | 7.2:+4985610 | None:intergenic |
| AGGCTCTTGGAGATTATACA+AGG | 0.562636 | 7.2:-4987868 | MS.gene28653:CDS |
| TTTCGCCAAACACCTCGTAC+AGG | 0.565462 | 7.2:+4984952 | None:intergenic |
| ACTGTACACACACATGTCTA+CGG | 0.565907 | 7.2:-4987309 | MS.gene28653:CDS |
| ACATTTCTTATGTGAAGATG+AGG | 0.568216 | 7.2:-4986973 | MS.gene28653:CDS |
| TTCTAGATCTTGAAAACTCA+AGG | 0.570577 | 7.2:-4985041 | MS.gene28653:CDS |
| TGCCGTCTGAGGTGAGAGAA+GGG | 0.571295 | 7.2:-4987823 | MS.gene28653:CDS |
| AGATGATCAAGGCTATGTGC+AGG | 0.572429 | 7.2:-4987736 | MS.gene28653:CDS |
| GATGGAAGTGAGAGTGAGAG+AGG | 0.573018 | 7.2:-4987392 | MS.gene28653:CDS |
| TATAGTATTCAAATTGTCCC+GGG | 0.574326 | 7.2:+4987150 | None:intergenic |
| GCTGCACATAGAACTGCTCA+TGG | 0.574984 | 7.2:-4985918 | MS.gene28653:CDS |
| GCTTATGTGTTGATTCAACT+GGG | 0.578614 | 7.2:+4987433 | None:intergenic |
| AAGTTGGAGGTGCTATCAAA+GGG | 0.579069 | 7.2:-4985279 | MS.gene28653:CDS |
| TAGGAATATAGGGCAGCTGA+AGG | 0.579349 | 7.2:-4987648 | MS.gene28653:CDS |
| TCGAAGGACACACGTGACAA+TGG | 0.581101 | 7.2:-4985876 | MS.gene28653:CDS |
| CAACATAAGACTAAGCTTGG+TGG | 0.581293 | 7.2:-4985192 | MS.gene28653:CDS |
| GGAAGTGAGAGTGAGAGAGG+TGG | 0.582135 | 7.2:-4987389 | MS.gene28653:CDS |
| GGGCCAATTGCTTATGATGA+CGG | 0.583706 | 7.2:-4986320 | MS.gene28653:CDS |
| GCTCATGGAAAACTACCTGC+TGG | 0.585320 | 7.2:-4985903 | MS.gene28653:CDS |
| TTCCCTTCTCTCACCTCAGA+CGG | 0.588436 | 7.2:+4987821 | None:intergenic |
| ACGAGGTGTTTGGCGAAAGG+GGG | 0.591849 | 7.2:-4984947 | MS.gene28653:CDS |
| CGAGGTGTTTGGCGAAAGGG+GGG | 0.592185 | 7.2:-4984946 | MS.gene28653:CDS |
| CTGGCCAGGAAGTGGAGGAA+AGG | 0.594675 | 7.2:+4986178 | None:intergenic |
| TCCACGACTTTGTACAGACC+AGG | 0.595043 | 7.2:+4986052 | None:intergenic |
| TGTCTATATCGAAAACTAGT+CGG | 0.595511 | 7.2:+4986485 | None:intergenic |
| AGCTATGCCCTAAGGCCTGA+CGG | 0.595861 | 7.2:+4986222 | None:intergenic |
| ACAGGTGACTCCGACGTGGA+TGG | 0.598357 | 7.2:-4987410 | MS.gene28653:CDS |
| AAAATGCATTCATATCCTCA+TGG | 0.599319 | 7.2:+4987780 | None:intergenic |
| AAGTTCCTCAGAGTGCGCCT+TGG | 0.601135 | 7.2:-4985084 | MS.gene28653:CDS |
| AGGTCTAGAGCTATGCCCTA+AGG | 0.601783 | 7.2:+4986214 | None:intergenic |
| GTCTGAGGTGAGAGAAGGGA+AGG | 0.602958 | 7.2:-4987819 | MS.gene28653:CDS |
| AACACTTTCCAAGAAAATGA+CGG | 0.610939 | 7.2:-4985465 | MS.gene28653:CDS |
| GACATAGAGACATAATGCTA+CGG | 0.612845 | 7.2:-4986697 | MS.gene28653:intron |
| GCCTGGTCTGTACAAAGTCG+TGG | 0.614242 | 7.2:-4986053 | MS.gene28653:CDS |
| AACATGGAGGGCGTATGTCA+CGG | 0.615404 | 7.2:-4986674 | MS.gene28653:CDS |
| GGACCATTACAAGATGATCA+AGG | 0.615538 | 7.2:-4987747 | MS.gene28653:CDS |
| ATGTGCAGTTTGTGTTTGGA+GGG | 0.615677 | 7.2:-4987596 | MS.gene28653:CDS |
| GCCGCACGTTTACGTCGGCA+TGG | 0.617464 | 7.2:-4986110 | MS.gene28653:CDS |
| TTGAATCAACACATAAGCAC+AGG | 0.617791 | 7.2:-4987428 | MS.gene28653:CDS |
| CGTTGTTCCAGGATCAGAAG+TGG | 0.622859 | 7.2:+4985017 | None:intergenic |
| ATGATGGTTCAAGGCGACAA+AGG | 0.623404 | 7.2:-4987673 | MS.gene28653:CDS |
| AAGTCCAAACACGAGTCTGA+AGG | 0.624220 | 7.2:-4986152 | MS.gene28653:CDS |
| TTCATTGTCCCCATAAAATG+GGG | 0.627402 | 7.2:+4987331 | None:intergenic |
| CATTACTTGAAGTTGGCTCA+CGG | 0.627438 | 7.2:+4986342 | None:intergenic |
| ACTACCTGCTGGTCCATCGA+AGG | 0.630114 | 7.2:-4985892 | MS.gene28653:CDS |
| ACCTTCAGAAGAGAAGTTGG+AGG | 0.630190 | 7.2:-4985292 | MS.gene28653:CDS |
| CACTTTCCAAGAAAATGACG+GGG | 0.631121 | 7.2:-4985463 | MS.gene28653:CDS |
| TTTATCTAATCAAAATAAGG+AGG | 0.631516 | 7.2:-4985145 | MS.gene28653:CDS |
| CAGAAATTGAAACTCCAACA+GGG | 0.633314 | 7.2:+4985808 | None:intergenic |
| GTTCTGCAAAATTCACACAT+AGG | 0.633688 | 7.2:+4987353 | None:intergenic |
| CAGTGAATGCGACAAGATCG+AGG | 0.637792 | 7.2:-4987705 | MS.gene28653:CDS |
| ATACTTGTCATATATGCCAA+AGG | 0.640017 | 7.2:-4987280 | MS.gene28653:intron |
| GGAGTTGGGCTGCCTGTACG+AGG | 0.647685 | 7.2:-4984964 | MS.gene28653:CDS |
| TGATTCAAACGGATTAACGA+TGG | 0.648440 | 7.2:+4986280 | None:intergenic |
| ACTTGTGCCGCAGAAACTGG+AGG | 0.648801 | 7.2:+4985780 | None:intergenic |
| TGAACATTCTCCACATTCAG+CGG | 0.650353 | 7.2:+4985729 | None:intergenic |
| AGGAATATAGGGCAGCTGAA+GGG | 0.651781 | 7.2:-4987647 | MS.gene28653:CDS |
| CATCACCAAGGCGCACTCTG+AGG | 0.652241 | 7.2:+4985079 | None:intergenic |
| ATATCCTCATGGTACCAGTA+CGG | 0.661958 | 7.2:+4987791 | None:intergenic |
| TAAGAACTATGATGACCTTG+AGG | 0.662578 | 7.2:-4987129 | MS.gene28653:intron |
| ATATCTGCTCAATATCGCCA+AGG | 0.662686 | 7.2:-4985627 | MS.gene28653:CDS |
| TTTAATTGCAGGCAGCACCC+GGG | 0.666612 | 7.2:-4987167 | MS.gene28653:intron |
| CCGAAGCAGAACCATCACCA+AGG | 0.667674 | 7.2:+4985067 | None:intergenic |
| ACATTCTCCACATTCAGCGG+AGG | 0.667936 | 7.2:+4985732 | None:intergenic |
| GTAAGTCATTAGATGTTAGG+CGG | 0.674875 | 7.2:-4985383 | MS.gene28653:CDS |
| GGAAAGGAAGAGTCTACCAG+AGG | 0.674976 | 7.2:+4986194 | None:intergenic |
| AATGAACAGGATCAGCGCCG+TGG | 0.675594 | 7.2:-4986458 | MS.gene28653:CDS |
| CCATGGCCGCACGTTTACGT+CGG | 0.678172 | 7.2:-4986115 | MS.gene28653:CDS |
| ATGAAGACAGTAATTAACAG+TGG | 0.678648 | 7.2:-4985975 | MS.gene28653:CDS |
| ATAATGCTACGGAACATGGA+GGG | 0.682834 | 7.2:-4986686 | MS.gene28653:CDS |
| GCTATCTGCTAATCTCTCAG+TGG | 0.687825 | 7.2:+4985353 | None:intergenic |
| CATAATGCTACGGAACATGG+AGG | 0.689083 | 7.2:-4986687 | MS.gene28653:CDS |
| AGGTTCATCTAGCAATACCA+TGG | 0.693071 | 7.2:-4986132 | MS.gene28653:CDS |
| GGCTCTTGGAGATTATACAA+GGG | 0.699064 | 7.2:-4987867 | MS.gene28653:CDS |
| AAGCACAGGTGACTCCGACG+TGG | 0.705911 | 7.2:-4987414 | MS.gene28653:CDS |
| GCCATGCCGACGTAAACGTG+CGG | 0.707625 | 7.2:+4986109 | None:intergenic |
| AATCAAAATAAGGAGGATGG+GGG | 0.708920 | 7.2:-4985138 | MS.gene28653:CDS |
| ACTCTCACTTCCATCCACGT+CGG | 0.716442 | 7.2:+4987400 | None:intergenic |
| ACATATGCAACTTATGACGG+TGG | 0.726710 | 7.2:+4987615 | None:intergenic |
| TGGACCGTACTGGTACCATG+AGG | 0.780655 | 7.2:-4987795 | MS.gene28653:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAAAACAATAAATTTCT+TGG | + | chr7.2:4986134-4986153 | None:intergenic | 15.0% |
| !!! | AATTTTTAATTTACCTTTGT+CGG | + | chr7.2:4987830-4987849 | None:intergenic | 15.0% |
| !!! | TATTTTTTGAATGACAATTT+TGG | - | chr7.2:4985535-4985554 | MS.gene28653:CDS | 15.0% |
| !! | AATGTATCTGTAATTAATTC+TGG | - | chr7.2:4986992-4987011 | MS.gene28653:CDS | 20.0% |
| !! | ATAAAAAAACATCAATAGCA+GGG | - | chr7.2:4985110-4985129 | MS.gene28653:CDS | 20.0% |
| !! | ATTGTCATTCAAAAAATACA+TGG | + | chr7.2:4985533-4985552 | None:intergenic | 20.0% |
| !! | CAGTTTATCTAATCAAAATA+AGG | - | chr7.2:4987924-4987943 | MS.gene28653:intron | 20.0% |
| !! | TTTATCTAATCAAAATAAGG+AGG | - | chr7.2:4987927-4987946 | MS.gene28653:intron | 20.0% |
| !!! | AAGGTGAAATATTTATGTTT+TGG | - | chr7.2:4985503-4985522 | MS.gene28653:CDS | 20.0% |
| ! | AAACAATAAATTTCTTGGCA+AGG | + | chr7.2:4986129-4986148 | None:intergenic | 25.0% |
| ! | AATGGTAACAATAATGATTC+TGG | - | chr7.2:4988087-4988106 | MS.gene28653:intron | 25.0% |
| ! | ATATAGACACAATAATGAAC+AGG | - | chr7.2:4986601-4986620 | MS.gene28653:intron | 25.0% |
| ! | ATGGAAGTAAATATTGTCTT+TGG | + | chr7.2:4986515-4986534 | None:intergenic | 25.0% |
| ! | CTGTTAATGGTTTATTTGAA+AGG | - | chr7.2:4986222-4986241 | MS.gene28653:CDS | 25.0% |
| ! | GATAAAAAAACATCAATAGC+AGG | - | chr7.2:4985109-4985128 | MS.gene28653:CDS | 25.0% |
| ! | TTATAGTATTCAAATTGTCC+CGG | + | chr7.2:4985926-4985945 | None:intergenic | 25.0% |
| !! | ATTAGCTTAATTGTTACCTT+TGG | + | chr7.2:4985811-4985830 | None:intergenic | 25.0% |
| !! | TTCTTCATCTTTTCTGTTAA+TGG | - | chr7.2:4986209-4986228 | MS.gene28653:CDS | 25.0% |
| !!! | ATGTGGTTGATATTCAATTT+TGG | - | chr7.2:4985170-4985189 | MS.gene28653:CDS | 25.0% |
| AAAATGCATTCATATCCTCA+TGG | + | chr7.2:4985295-4985314 | None:intergenic | 30.0% | |
| AACACTTTCCAAGAAAATGA+CGG | - | chr7.2:4987607-4987626 | MS.gene28653:CDS | 30.0% | |
| AACAGAAAAGATGAAGAAAC+AGG | + | chr7.2:4986207-4986226 | None:intergenic | 30.0% | |
| AAGGTAAGTCATTAGATGTT+AGG | - | chr7.2:4987686-4987705 | MS.gene28653:CDS | 30.0% | |
| AATGAAAGGTAACTTCTGTA+AGG | + | chr7.2:4986552-4986571 | None:intergenic | 30.0% | |
| ACAACAAAGTCTCAAAATTC+TGG | - | chr7.2:4987070-4987089 | MS.gene28653:intron | 30.0% | |
| ACATTTCTTATGTGAAGATG+AGG | - | chr7.2:4986099-4986118 | MS.gene28653:CDS | 30.0% | |
| ATACTTGTCATATATGCCAA+AGG | - | chr7.2:4985792-4985811 | MS.gene28653:CDS | 30.0% | |
| ATGAAGACAGTAATTAACAG+TGG | - | chr7.2:4987097-4987116 | MS.gene28653:intron | 30.0% | |
| ATGTCTCTATGTCATAAACA+AGG | + | chr7.2:4986368-4986387 | None:intergenic | 30.0% | |
| CACATAAGAAATGTTGTTGT+CGG | + | chr7.2:4986093-4986112 | None:intergenic | 30.0% | |
| CTAATCAAAATAAGGAGGAT+GGG | - | chr7.2:4987932-4987951 | MS.gene28653:intron | 30.0% | |
| GACAAAGGTTTAGGAATATA+GGG | - | chr7.2:4985414-4985433 | MS.gene28653:CDS | 30.0% | |
| GACAAATATTTCTTACCTCA+AGG | + | chr7.2:4985961-4985980 | None:intergenic | 30.0% | |
| TAATCAAAATAAGGAGGATG+GGG | - | chr7.2:4987933-4987952 | MS.gene28653:intron | 30.0% | |
| TAATCAATCATGTGCTCAAT+AGG | - | chr7.2:4985827-4985846 | MS.gene28653:CDS | 30.0% | |
| TACCATCATTTCTATGACAT+AGG | - | chr7.2:4985583-4985602 | MS.gene28653:CDS | 30.0% | |
| TATAGTATTCAAATTGTCCC+GGG | + | chr7.2:4985925-4985944 | None:intergenic | 30.0% | |
| TATATCTGTGCTTTAATTGC+AGG | - | chr7.2:4985894-4985913 | MS.gene28653:CDS | 30.0% | |
| TCTAATCAAAATAAGGAGGA+TGG | - | chr7.2:4987931-4987950 | MS.gene28653:intron | 30.0% | |
| TGACCTGATAGTATTTGTAT+GGG | - | chr7.2:4986040-4986059 | MS.gene28653:CDS | 30.0% | |
| TGTCTATATCGAAAACTAGT+CGG | + | chr7.2:4986590-4986609 | None:intergenic | 30.0% | |
| TGTTAATTACTGTCTTCATC+TGG | + | chr7.2:4987096-4987115 | None:intergenic | 30.0% | |
| TTCTAGATCTTGAAAACTCA+AGG | - | chr7.2:4988031-4988050 | MS.gene28653:intron | 30.0% | |
| TTGACCTGATAGTATTTGTA+TGG | - | chr7.2:4986039-4986058 | MS.gene28653:CDS | 30.0% | |
| ! | TAATTAATTCTGGAAATGCC+TGG | - | chr7.2:4987002-4987021 | MS.gene28653:intron | 30.0% |
| ! | TTCTGAAAATCAACTTTCCA+TGG | - | chr7.2:4986664-4986683 | MS.gene28653:CDS | 30.0% |
| ! | TTTGTTGCTATCTTTTGATG+TGG | - | chr7.2:4985153-4985172 | MS.gene28653:CDS | 30.0% |
| !! | AACAATAATGATTCTGGAGT+TGG | - | chr7.2:4988093-4988112 | MS.gene28653:CDS | 30.0% |
| !! | ACAATAATGATTCTGGAGTT+GGG | - | chr7.2:4988094-4988113 | MS.gene28653:CDS | 30.0% |
| !! | CAATAGGTGTTTCTTTGTTT+TGG | - | chr7.2:4985843-4985862 | MS.gene28653:CDS | 30.0% |
| !! | TGAGTTTTCAAGATCTAGAA+GGG | + | chr7.2:4988031-4988050 | None:intergenic | 30.0% |
| !! | TTGAGTTTTCAAGATCTAGA+AGG | + | chr7.2:4988032-4988051 | None:intergenic | 30.0% |
| !!! | TCTTTTTTCGTCTGAAAGTA+AGG | - | chr7.2:4985993-4986012 | MS.gene28653:CDS | 30.0% |
| AACATAAGACTAAGCTTGGT+GGG | - | chr7.2:4987881-4987900 | MS.gene28653:intron | 35.0% | |
| AATCAAAATAAGGAGGATGG+GGG | - | chr7.2:4987934-4987953 | MS.gene28653:intron | 35.0% | |
| AATGTCGACAAGAAAGGTAA+AGG | - | chr7.2:4987667-4987686 | MS.gene28653:CDS | 35.0% | |
| ACACTTTCCAAGAAAATGAC+GGG | - | chr7.2:4987608-4987627 | MS.gene28653:CDS | 35.0% | |
| AGAAAAGACGTAGTCAAACT+TGG | - | chr7.2:4985008-4985027 | MS.gene28653:CDS | 35.0% | |
| AGCAACAAAATGATGGTTCA+AGG | - | chr7.2:4985390-4985409 | MS.gene28653:CDS | 35.0% | |
| AGTCAACATAAGACTAAGCT+TGG | - | chr7.2:4987877-4987896 | MS.gene28653:intron | 35.0% | |
| AGTTCATTGTCCCCATAAAA+TGG | + | chr7.2:4985746-4985765 | None:intergenic | 35.0% | |
| ATCTGTGAGGAAACAATGAA+AGG | + | chr7.2:4986566-4986585 | None:intergenic | 35.0% | |
| ATTTCCCATGCATGTTCATT+TGG | - | chr7.2:4986277-4986296 | MS.gene28653:CDS | 35.0% | |
| CACCTATGTCATAGAAATGA+TGG | + | chr7.2:4985588-4985607 | None:intergenic | 35.0% | |
| CAGAAATTGAAACTCCAACA+GGG | + | chr7.2:4987267-4987286 | None:intergenic | 35.0% | |
| CGACAAAGGTTTAGGAATAT+AGG | - | chr7.2:4985413-4985432 | MS.gene28653:CDS | 35.0% | |
| GAACTATTCCATTTGTGACT+TGG | - | chr7.2:4984974-4984993 | MS.gene28653:CDS | 35.0% | |
| GAATTAGCAAAACTTGATGC+TGG | + | chr7.2:4987127-4987146 | None:intergenic | 35.0% | |
| GACAAAAATGTCGACAAGAA+AGG | - | chr7.2:4987661-4987680 | MS.gene28653:CDS | 35.0% | |
| GACATAGAGACATAATGCTA+CGG | - | chr7.2:4986375-4986394 | MS.gene28653:CDS | 35.0% | |
| GATAGATACTGATGCATATG+TGG | - | chr7.2:4987471-4987490 | MS.gene28653:intron | 35.0% | |
| GCAGTAGCTAATGATTCAAA+CGG | + | chr7.2:4986806-4986825 | None:intergenic | 35.0% | |
| GTAAGTCATTAGATGTTAGG+CGG | - | chr7.2:4987689-4987708 | MS.gene28653:CDS | 35.0% | |
| GTTCATTGTCCCCATAAAAT+GGG | + | chr7.2:4985745-4985764 | None:intergenic | 35.0% | |
| GTTCTCATTCTCACTTTGTT+AGG | - | chr7.2:4985039-4985058 | MS.gene28653:CDS | 35.0% | |
| GTTCTGCAAAATTCACACAT+AGG | + | chr7.2:4985722-4985741 | None:intergenic | 35.0% | |
| TAAACCTTCAGAAGAGAAGT+TGG | - | chr7.2:4987777-4987796 | MS.gene28653:CDS | 35.0% | |
| TAAGAACTATGATGACCTTG+AGG | - | chr7.2:4985943-4985962 | MS.gene28653:CDS | 35.0% | |
| TCAATCTGAATCAGAGATGA+AGG | - | chr7.2:4986150-4986169 | MS.gene28653:CDS | 35.0% | |
| TCAGAAATTGAAACTCCAAC+AGG | + | chr7.2:4987268-4987287 | None:intergenic | 35.0% | |
| TGCACATATGCAACTTATGA+CGG | + | chr7.2:4985463-4985482 | None:intergenic | 35.0% | |
| TTCATTGTCCCCATAAAATG+GGG | + | chr7.2:4985744-4985763 | None:intergenic | 35.0% | |
| TTGAATCAACACATAAGCAC+AGG | - | chr7.2:4985644-4985663 | MS.gene28653:CDS | 35.0% | |
| TTGCCCATACAAATACTATC+AGG | + | chr7.2:4986046-4986065 | None:intergenic | 35.0% | |
| ! | ACTACGAATCTTTTCAACCA+AGG | + | chr7.2:4987383-4987402 | None:intergenic | 35.0% |
| ! | ACTTCTGTAAGGTACTAAGA+AGG | + | chr7.2:4986541-4986560 | None:intergenic | 35.0% |
| ! | CTAGAGTTTGTTTGAATCTG+CGG | + | chr7.2:4987856-4987875 | None:intergenic | 35.0% |
| ! | GTTGTCTTTTTAGATTGCGA+AGG | + | chr7.2:4987055-4987074 | None:intergenic | 35.0% |
| ! | TAAGGTACTAAGAAGGATCA+TGG | + | chr7.2:4986534-4986553 | None:intergenic | 35.0% |
| ! | TAGCCTTGATCATCTTGTAA+TGG | + | chr7.2:4985331-4985350 | None:intergenic | 35.0% |
| ! | TTTGCAGAACCCCATTTTAT+GGG | - | chr7.2:4985732-4985751 | MS.gene28653:CDS | 35.0% |
| ! | TTTTGCAGAACCCCATTTTA+TGG | - | chr7.2:4985731-4985750 | MS.gene28653:CDS | 35.0% |
| !! | CAATTTTGGTGTATACTGTC+AGG | - | chr7.2:4985184-4985203 | MS.gene28653:CDS | 35.0% |
| !! | GCTTATGTGTTGATTCAACT+GGG | + | chr7.2:4985642-4985661 | None:intergenic | 35.0% |
| !! | TGATTCAAACGGATTAACGA+TGG | + | chr7.2:4986795-4986814 | None:intergenic | 35.0% |
| !! | TGCTTATGTGTTGATTCAAC+TGG | + | chr7.2:4985643-4985662 | None:intergenic | 35.0% |
| AAAACTAGTCGGTATCTGTG+AGG | + | chr7.2:4986579-4986598 | None:intergenic | 40.0% | |
| AATGATCACGACGAAATGTC+CGG | + | chr7.2:4986646-4986665 | None:intergenic | 40.0% | |
| ACATATGCAACTTATGACGG+TGG | + | chr7.2:4985460-4985479 | None:intergenic | 40.0% | |
| ACTGTACACACACATGTCTA+CGG | - | chr7.2:4985763-4985782 | MS.gene28653:CDS | 40.0% | |
| AGAAATGTTGTTGTCGGAAG+TGG | + | chr7.2:4986087-4986106 | None:intergenic | 40.0% | |
| AGACATAATGCTACGGAACA+TGG | - | chr7.2:4986382-4986401 | MS.gene28653:CDS | 40.0% | |
| AGCATCCAAATGAACATGCA+TGG | + | chr7.2:4986285-4986304 | None:intergenic | 40.0% | |
| AGGCTCTTGGAGATTATACA+AGG | - | chr7.2:4985204-4985223 | MS.gene28653:CDS | 40.0% | |
| AGGTTCATCTAGCAATACCA+TGG | - | chr7.2:4986940-4986959 | MS.gene28653:CDS | 40.0% | |
| ATAATGCTACGGAACATGGA+GGG | - | chr7.2:4986386-4986405 | MS.gene28653:CDS | 40.0% | |
| ATACCAACAGACATGAGAAG+TGG | + | chr7.2:4986480-4986499 | None:intergenic | 40.0% | |
| ATATCCTCATGGTACCAGTA+CGG | + | chr7.2:4985284-4985303 | None:intergenic | 40.0% | |
| ATATCTGCTCAATATCGCCA+AGG | - | chr7.2:4987445-4987464 | MS.gene28653:CDS | 40.0% | |
| ATCAACTTCAAGATACCGTC+AGG | - | chr7.2:4986835-4986854 | MS.gene28653:intron | 40.0% | |
| ATCGAGGAGCAACAAAATGA+TGG | - | chr7.2:4985383-4985402 | MS.gene28653:CDS | 40.0% | |
| ATGTGCAGTTTGTGTTTGGA+GGG | - | chr7.2:4985476-4985495 | MS.gene28653:CDS | 40.0% | |
| ATTGGCCCATTACTTGAAGT+TGG | + | chr7.2:4986740-4986759 | None:intergenic | 40.0% | |
| CAACATAAGACTAAGCTTGG+TGG | - | chr7.2:4987880-4987899 | MS.gene28653:intron | 40.0% | |
| CACTTTCCAAGAAAATGACG+GGG | - | chr7.2:4987609-4987628 | MS.gene28653:CDS | 40.0% | |
| CATGTTCACCAAGTCACAAA+TGG | + | chr7.2:4984985-4985004 | None:intergenic | 40.0% | |
| GACTGATTACTTACAGCACT+GGG | - | chr7.2:4986174-4986193 | MS.gene28653:CDS | 40.0% | |
| GCATATGTGCAGTTTGTGTT+TGG | - | chr7.2:4985472-4985491 | MS.gene28653:CDS | 40.0% | |
| GCATCCAAATGAACATGCAT+GGG | + | chr7.2:4986284-4986303 | None:intergenic | 40.0% | |
| GGAACAACGGACAGTTTAAA+TGG | - | chr7.2:4988069-4988088 | MS.gene28653:intron | 40.0% | |
| GGACCATTACAAGATGATCA+AGG | - | chr7.2:4985325-4985344 | MS.gene28653:CDS | 40.0% | |
| GGCTCTTGGAGATTATACAA+GGG | - | chr7.2:4985205-4985224 | MS.gene28653:CDS | 40.0% | |
| GTGAGCCAACTTCAAGTAAT+GGG | - | chr7.2:4986732-4986751 | MS.gene28653:intron | 40.0% | |
| TACCAACAGACATGAGAAGT+GGG | + | chr7.2:4986479-4986498 | None:intergenic | 40.0% | |
| TATGTGCAGTTTGTGTTTGG+AGG | - | chr7.2:4985475-4985494 | MS.gene28653:CDS | 40.0% | |
| TCTCCGTCATCATAAGCAAT+TGG | + | chr7.2:4986758-4986777 | None:intergenic | 40.0% | |
| TGAACATTCTCCACATTCAG+CGG | + | chr7.2:4987346-4987365 | None:intergenic | 40.0% | |
| TGACTGATTACTTACAGCAC+TGG | - | chr7.2:4986173-4986192 | MS.gene28653:CDS | 40.0% | |
| TGCTCTTCAGGTATGTTCAA+TGG | - | chr7.2:4986435-4986454 | MS.gene28653:CDS | 40.0% | |
| TTAGATTGCGAAGGTTGTAC+AGG | + | chr7.2:4987046-4987065 | None:intergenic | 40.0% | |
| TTTAAACTGTCCGTTGTTCC+AGG | + | chr7.2:4988069-4988088 | None:intergenic | 40.0% | |
| ! | CAAGAAAATGACGGGGTTTA+TGG | - | chr7.2:4987616-4987635 | MS.gene28653:CDS | 40.0% |
| ! | CATTACTTGAAGTTGGCTCA+CGG | + | chr7.2:4986733-4986752 | None:intergenic | 40.0% |
| ! | CTTTTCAACCAAGGACTTGT+TGG | + | chr7.2:4987374-4987393 | None:intergenic | 40.0% |
| ! | GACATTTTTGTCCTTGCGAT+GGG | + | chr7.2:4987653-4987672 | None:intergenic | 40.0% |
| ! | GTCTGAAAGTAAGGCTTTGT+CGG | - | chr7.2:4986002-4986021 | MS.gene28653:CDS | 40.0% |
| ! | TGATTTTCCTCCAGTTTCTG+CGG | - | chr7.2:4987285-4987304 | MS.gene28653:CDS | 40.0% |
| ! | TTGCAGAACCCCATTTTATG+GGG | - | chr7.2:4985733-4985752 | MS.gene28653:CDS | 40.0% |
| !! | AAGTTGGAGGTGCTATCAAA+GGG | - | chr7.2:4987793-4987812 | MS.gene28653:CDS | 40.0% |
| !! | CATAAACCCCGTCATTTTCT+TGG | + | chr7.2:4987618-4987637 | None:intergenic | 40.0% |
| !! | CATTTGTGACTTGGTGAACA+TGG | - | chr7.2:4984983-4985002 | MS.gene28653:CDS | 40.0% |
| !! | GAATGCATTTTTCGATGACG+TGG | - | chr7.2:4985304-4985323 | MS.gene28653:CDS | 40.0% |
| !!! | AGTGAGAGAGGTGGTTTTAT+GGG | - | chr7.2:4985692-4985711 | MS.gene28653:CDS | 40.0% |
| !!! | CTTTTGGAGTCTTACAATGC+TGG | - | chr7.2:4987574-4987593 | MS.gene28653:intron | 40.0% |
| AAAGCGTAATGCTGCTCTTC+AGG | - | chr7.2:4986423-4986442 | MS.gene28653:CDS | 45.0% | |
| AACCCACTTCTCATGTCTGT+TGG | - | chr7.2:4986474-4986493 | MS.gene28653:CDS | 45.0% | |
| AAGTCCAAACACGAGTCTGA+AGG | - | chr7.2:4986920-4986939 | MS.gene28653:intron | 45.0% | |
| ACCTCCAACTTCTCTTCTGA+AGG | + | chr7.2:4987784-4987803 | None:intergenic | 45.0% | |
| ACCTTCAGAAGAGAAGTTGG+AGG | - | chr7.2:4987780-4987799 | MS.gene28653:CDS | 45.0% | |
| AGATGATCAAGGCTATGTGC+AGG | - | chr7.2:4985336-4985355 | MS.gene28653:CDS | 45.0% | |
| AGGAATATAGGGCAGCTGAA+GGG | - | chr7.2:4985425-4985444 | MS.gene28653:CDS | 45.0% | |
| ATGATGGTTCAAGGCGACAA+AGG | - | chr7.2:4985399-4985418 | MS.gene28653:CDS | 45.0% | |
| CACTTCTGATCCTGGAACAA+CGG | - | chr7.2:4988056-4988075 | MS.gene28653:intron | 45.0% | |
| CATAATGCTACGGAACATGG+AGG | - | chr7.2:4986385-4986404 | MS.gene28653:CDS | 45.0% | |
| CATCAGTATCTATCGTGCCT+TGG | + | chr7.2:4987465-4987484 | None:intergenic | 45.0% | |
| CGTGAGCCAACTTCAAGTAA+TGG | - | chr7.2:4986731-4986750 | MS.gene28653:intron | 45.0% | |
| CTCGTTGAAAACAACCCTGT+TGG | - | chr7.2:4987250-4987269 | MS.gene28653:intron | 45.0% | |
| GCTATCTGCTAATCTCTCAG+TGG | + | chr7.2:4987722-4987741 | None:intergenic | 45.0% | |
| GGGCAGACTGAAACTTCAAA+TGG | - | chr7.2:4987901-4987920 | MS.gene28653:intron | 45.0% | |
| GGGCCAATTGCTTATGATGA+CGG | - | chr7.2:4986752-4986771 | MS.gene28653:intron | 45.0% | |
| GTTCAAGGCGACAAAGGTTT+AGG | - | chr7.2:4985405-4985424 | MS.gene28653:CDS | 45.0% | |
| GTTTCATCTTGTACCTGAGC+TGG | - | chr7.2:4987516-4987535 | MS.gene28653:intron | 45.0% | |
| TAGGAATATAGGGCAGCTGA+AGG | - | chr7.2:4985424-4985443 | MS.gene28653:CDS | 45.0% | |
| TGAACCTTCAGACTCGTGTT+TGG | + | chr7.2:4986927-4986946 | None:intergenic | 45.0% | |
| TGCATGGGAAATCATCAAGC+AGG | + | chr7.2:4986269-4986288 | None:intergenic | 45.0% | |
| TTTGTGTTTGGAGGGAAGGA+AGG | - | chr7.2:4985484-4985503 | MS.gene28653:CDS | 45.0% | |
| ! | ACTCGTGTTTGGACTTTTCC+TGG | + | chr7.2:4986916-4986935 | None:intergenic | 45.0% |
| ! | CGACATTTTTGTCCTTGCGA+TGG | + | chr7.2:4987654-4987673 | None:intergenic | 45.0% |
| ! | TCGGAAGCAGAGAGAACTTT+TGG | - | chr7.2:4987558-4987577 | MS.gene28653:intron | 45.0% |
| !! | CAACAGGGTTGTTTTCAACG+AGG | + | chr7.2:4987252-4987271 | None:intergenic | 45.0% |
| !! | GAAGTTGGAGGTGCTATCAA+AGG | - | chr7.2:4987792-4987811 | MS.gene28653:CDS | 45.0% |
| !! | GAGTGAGAGAGGTGGTTTTA+TGG | - | chr7.2:4985691-4985710 | MS.gene28653:CDS | 45.0% |
| !! | GGGTTGTTTTCAACGAGGTT+TGG | + | chr7.2:4987247-4987266 | None:intergenic | 45.0% |
| !!! | GTGAGAGAGGTGGTTTTATG+GGG | - | chr7.2:4985693-4985712 | MS.gene28653:CDS | 45.0% |
| ACATTCTCCACATTCAGCGG+AGG | + | chr7.2:4987343-4987362 | None:intergenic | 50.0% | |
| ACTCTCACTTCCATCCACGT+CGG | + | chr7.2:4985675-4985694 | None:intergenic | 50.0% | |
| AGCATTAGCAGTCTCCAGAC+TGG | + | chr7.2:4986699-4986718 | None:intergenic | 50.0% | |
| CAAAATAAGGAGGATGGGGG+TGG | - | chr7.2:4987937-4987956 | MS.gene28653:intron | 50.0% | |
| CAAGATACCGTCAGGCCTTA+GGG | - | chr7.2:4986843-4986862 | MS.gene28653:intron | 50.0% | |
| CAGTGAATGCGACAAGATCG+AGG | - | chr7.2:4985367-4985386 | MS.gene28653:CDS | 50.0% | |
| CGTTGTTCCAGGATCAGAAG+TGG | + | chr7.2:4988058-4988077 | None:intergenic | 50.0% | |
| CTTTAATTGCAGGCAGCACC+CGG | - | chr7.2:4985904-4985923 | MS.gene28653:CDS | 50.0% | |
| GATGGAAGTGAGAGTGAGAG+AGG | - | chr7.2:4985680-4985699 | MS.gene28653:CDS | 50.0% | |
| GCAGTTTGTGTTTGGAGGGA+AGG | - | chr7.2:4985480-4985499 | MS.gene28653:CDS | 50.0% | |
| GCTCATGGAAAACTACCTGC+TGG | - | chr7.2:4987169-4987188 | MS.gene28653:intron | 50.0% | |
| GCTGCACATAGAACTGCTCA+TGG | - | chr7.2:4987154-4987173 | MS.gene28653:CDS | 50.0% | |
| GGAAAGGAAGAGTCTACCAG+AGG | + | chr7.2:4986881-4986900 | None:intergenic | 50.0% | |
| GGTGTATACTGTCAGGCTCT+TGG | - | chr7.2:4985191-4985210 | MS.gene28653:CDS | 50.0% | |
| TCAAGATACCGTCAGGCCTT+AGG | - | chr7.2:4986842-4986861 | MS.gene28653:intron | 50.0% | |
| TCAAGGACCACTTCTGATCC+TGG | - | chr7.2:4988048-4988067 | MS.gene28653:intron | 50.0% | |
| TCAGTCTGCCAACAAGTCCT+TGG | - | chr7.2:4987363-4987382 | MS.gene28653:CDS | 50.0% | |
| TCCACGACTTTGTACAGACC+AGG | + | chr7.2:4987023-4987042 | None:intergenic | 50.0% | |
| TCGAAGGACACACGTGACAA+TGG | - | chr7.2:4987196-4987215 | MS.gene28653:intron | 50.0% | |
| TCTTCCTTTCCTCCACTTCC+TGG | - | chr7.2:4986890-4986909 | MS.gene28653:intron | 50.0% | |
| TTCCCTTCTCTCACCTCAGA+CGG | + | chr7.2:4985254-4985273 | None:intergenic | 50.0% | |
| TTGTCACGTGTGTCCTTCGA+TGG | + | chr7.2:4987196-4987215 | None:intergenic | 50.0% | |
| TTTAATTGCAGGCAGCACCC+GGG | - | chr7.2:4985905-4985924 | MS.gene28653:CDS | 50.0% | |
| TTTCGCCAAACACCTCGTAC+AGG | + | chr7.2:4988123-4988142 | None:intergenic | 50.0% | |
| ! | AACATGGAGGGCGTATGTCA+CGG | - | chr7.2:4986398-4986417 | MS.gene28653:CDS | 50.0% |
| ! | AGGTCTAGAGCTATGCCCTA+AGG | + | chr7.2:4986861-4986880 | None:intergenic | 50.0% |
| ! | GTACGAGGTGTTTGGCGAAA+GGG | - | chr7.2:4988123-4988142 | MS.gene28653:CDS | 50.0% |
| ! | TACGAGGTGTTTGGCGAAAG+GGG | - | chr7.2:4988124-4988143 | MS.gene28653:CDS | 50.0% |
| ! | TGTACGAGGTGTTTGGCGAA+AGG | - | chr7.2:4988122-4988141 | MS.gene28653:CDS | 50.0% |
| ! | TGTTTGGACTTTTCCTGGCC+AGG | + | chr7.2:4986911-4986930 | None:intergenic | 50.0% |
| !! | AGTCTCCAGACTGGCTTCAA+TGG | + | chr7.2:4986690-4986709 | None:intergenic | 50.0% |
| !! | CCTTGGTGATGGTTCTGCTT+CGG | - | chr7.2:4988005-4988024 | MS.gene28653:intron | 50.0% |
| AAGGGAAGGTTGGACCGTAC+TGG | - | chr7.2:4985267-4985286 | MS.gene28653:CDS | 55.0% | |
| AAGTTCCTCAGAGTGCGCCT+TGG | - | chr7.2:4987988-4988007 | MS.gene28653:intron | 55.0% | |
| AATAAGGAGGATGGGGGTGG+TGG | - | chr7.2:4987940-4987959 | MS.gene28653:intron | 55.0% | |
| AATGAACAGGATCAGCGCCG+TGG | - | chr7.2:4986614-4986633 | MS.gene28653:intron | 55.0% | |
| ACTACCTGCTGGTCCATCGA+AGG | - | chr7.2:4987180-4987199 | MS.gene28653:intron | 55.0% | |
| ACTTGTGCCGCAGAAACTGG+AGG | + | chr7.2:4987295-4987314 | None:intergenic | 55.0% | |
| AGCTATGCCCTAAGGCCTGA+CGG | + | chr7.2:4986853-4986872 | None:intergenic | 55.0% | |
| ATAAGGAGGATGGGGGTGGT+GGG | - | chr7.2:4987941-4987960 | MS.gene28653:intron | 55.0% | |
| CAAGACTATGCCCGGATGCT+CGG | - | chr7.2:4987539-4987558 | MS.gene28653:intron | 55.0% | |
| CATGGCCATTGAAGCCAGTC+TGG | - | chr7.2:4986682-4986701 | MS.gene28653:CDS | 55.0% | |
| CCGAAGCAGAACCATCACCA+AGG | + | chr7.2:4988008-4988027 | None:intergenic | 55.0% | |
| CTCACTTGTGCCGCAGAAAC+TGG | + | chr7.2:4987298-4987317 | None:intergenic | 55.0% | |
| GAAATGTCCGGCCTCTTCCA+CGG | + | chr7.2:4986634-4986653 | None:intergenic | 55.0% | |
| GAGGTGAGAGAAGGGAAGGT+TGG | - | chr7.2:4985257-4985276 | MS.gene28653:CDS | 55.0% | |
| GCCTGGTCTGTACAAAGTCG+TGG | - | chr7.2:4987019-4987038 | MS.gene28653:intron | 55.0% | |
| GGAAGTGAGAGTGAGAGAGG+TGG | - | chr7.2:4985683-4985702 | MS.gene28653:CDS | 55.0% | |
| TCTCTCTGCTTCCGAGCATC+CGG | + | chr7.2:4987553-4987572 | None:intergenic | 55.0% | |
| TGAGCTGGCAAGACTATGCC+CGG | - | chr7.2:4987531-4987550 | MS.gene28653:intron | 55.0% | |
| TTCTCTCACCTCAGACGGCA+GGG | + | chr7.2:4985249-4985268 | None:intergenic | 55.0% | |
| ! | AAGGCGCACTCTGAGGAACT+TGG | + | chr7.2:4987989-4988008 | None:intergenic | 55.0% |
| ! | ACGAGGTGTTTGGCGAAAGG+GGG | - | chr7.2:4988125-4988144 | MS.gene28653:CDS | 55.0% |
| ! | CTTTTCATCCCTGCCGTCTG+AGG | - | chr7.2:4985238-4985257 | MS.gene28653:CDS | 55.0% |
| ! | GACTTTTCCTGGCCAGGAAG+TGG | + | chr7.2:4986905-4986924 | None:intergenic | 55.0% |
| ! | GGTGCTTATCGCACCGACAA+AGG | - | chr7.2:4987814-4987833 | MS.gene28653:CDS | 55.0% |
| ! | GTCTGAGGTGAGAGAAGGGA+AGG | - | chr7.2:4985253-4985272 | MS.gene28653:CDS | 55.0% |
| ! | GTGGACTGTGTGCAGCAGTT+TGG | - | chr7.2:4987490-4987509 | MS.gene28653:intron | 55.0% |
| ! | TGCCGTCTGAGGTGAGAGAA+GGG | - | chr7.2:4985249-4985268 | MS.gene28653:CDS | 55.0% |
| ! | TGGACCGTACTGGTACCATG+AGG | - | chr7.2:4985277-4985296 | MS.gene28653:CDS | 55.0% |
| ! | TTTTCCTGGCCAGGAAGTGG+AGG | + | chr7.2:4986902-4986921 | None:intergenic | 55.0% |
| !! | AGGGCATAGCTCTAGACCTC+TGG | - | chr7.2:4986862-4986881 | MS.gene28653:intron | 55.0% |
| !! | CAGACTGGCTTCAATGGCCA+TGG | + | chr7.2:4986684-4986703 | None:intergenic | 55.0% |
| AAGCACAGGTGACTCCGACG+TGG | - | chr7.2:4985658-4985677 | MS.gene28653:CDS | 60.0% | |
| ACAGGTGACTCCGACGTGGA+TGG | - | chr7.2:4985662-4985681 | MS.gene28653:CDS | 60.0% | |
| CATCACCAAGGCGCACTCTG+AGG | + | chr7.2:4987996-4988015 | None:intergenic | 60.0% | |
| CCATGGCCGCACGTTTACGT+CGG | - | chr7.2:4986957-4986976 | MS.gene28653:CDS | 60.0% | |
| CTCAGAGTGCGCCTTGGTGA+TGG | - | chr7.2:4987994-4988013 | MS.gene28653:intron | 60.0% | |
| CTCTCTGCTTCCGAGCATCC+GGG | + | chr7.2:4987552-4987571 | None:intergenic | 60.0% | |
| CTGGCCAGGAAGTGGAGGAA+AGG | + | chr7.2:4986897-4986916 | None:intergenic | 60.0% | |
| CTTCTCTCACCTCAGACGGC+AGG | + | chr7.2:4985250-4985269 | None:intergenic | 60.0% | |
| CTTTCCTCCACTTCCTGGCC+AGG | - | chr7.2:4986895-4986914 | MS.gene28653:intron | 60.0% | |
| GCCATGCCGACGTAAACGTG+CGG | + | chr7.2:4986966-4986985 | None:intergenic | 60.0% | |
| GTGTCCTTCGATGGACCAGC+AGG | + | chr7.2:4987187-4987206 | None:intergenic | 60.0% | |
| TAGCCAGCCTCCGCTGAATG+TGG | - | chr7.2:4987333-4987352 | MS.gene28653:CDS | 60.0% | |
| TCTCCACATTCAGCGGAGGC+TGG | + | chr7.2:4987339-4987358 | None:intergenic | 60.0% | |
| ! | AGCGGAGGCTGGCTACTTGT+AGG | + | chr7.2:4987328-4987347 | None:intergenic | 60.0% |
| ! | CGAGGTGTTTGGCGAAAGGG+GGG | - | chr7.2:4988126-4988145 | MS.gene28653:CDS | 60.0% |
| ! | CTGCCGTCTGAGGTGAGAGA+AGG | - | chr7.2:4985248-4985267 | MS.gene28653:CDS | 60.0% |
| ! | GGCTGCCTGTACGAGGTGTT+TGG | - | chr7.2:4988115-4988134 | MS.gene28653:CDS | 60.0% |
| ! | GGGCATAGTCTTGCCAGCTC+AGG | + | chr7.2:4987532-4987551 | None:intergenic | 60.0% |
| ATCAGCGCCGTGGAAGAGGC+CGG | - | chr7.2:4986624-4986643 | MS.gene28653:intron | 65.0% | |
| CAGCGCTAGCACCCATCGCA+AGG | - | chr7.2:4987639-4987658 | MS.gene28653:CDS | 65.0% | |
| CAGGATCAGCGCCGTGGAAG+AGG | - | chr7.2:4986620-4986639 | MS.gene28653:intron | 65.0% | |
| CCGACGTAAACGTGCGGCCA+TGG | + | chr7.2:4986960-4986979 | None:intergenic | 65.0% | |
| GCCGCACGTTTACGTCGGCA+TGG | - | chr7.2:4986962-4986981 | MS.gene28653:CDS | 65.0% | |
| GGAGTTGGGCTGCCTGTACG+AGG | - | chr7.2:4988108-4988127 | MS.gene28653:CDS | 65.0% | |
| GGTGTTTGGCGAAAGGGGGG+AGG | - | chr7.2:4988129-4988148 | MS.gene28653:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 4984924 | 4988170 | 4984924 | ID=MS.gene28653 |
| chr7.2 | mRNA | 4984924 | 4988170 | 4984924 | ID=MS.gene28653.t1;Parent=MS.gene28653 |
| chr7.2 | exon | 4988090 | 4988170 | 4988090 | ID=MS.gene28653.t1.exon1;Parent=MS.gene28653.t1 |
| chr7.2 | CDS | 4988090 | 4988170 | 4988090 | ID=cds.MS.gene28653.t1;Parent=MS.gene28653.t1 |
| chr7.2 | exon | 4987589 | 4987888 | 4987589 | ID=MS.gene28653.t1.exon2;Parent=MS.gene28653.t1 |
| chr7.2 | CDS | 4987589 | 4987888 | 4987589 | ID=cds.MS.gene28653.t1;Parent=MS.gene28653.t1 |
| chr7.2 | exon | 4987281 | 4987489 | 4987281 | ID=MS.gene28653.t1.exon3;Parent=MS.gene28653.t1 |
| chr7.2 | CDS | 4987281 | 4987489 | 4987281 | ID=cds.MS.gene28653.t1;Parent=MS.gene28653.t1 |
| chr7.2 | exon | 4987130 | 4987178 | 4987130 | ID=MS.gene28653.t1.exon4;Parent=MS.gene28653.t1 |
| chr7.2 | CDS | 4987130 | 4987178 | 4987130 | ID=cds.MS.gene28653.t1;Parent=MS.gene28653.t1 |
| chr7.2 | exon | 4986923 | 4987012 | 4986923 | ID=MS.gene28653.t1.exon5;Parent=MS.gene28653.t1 |
| chr7.2 | CDS | 4986923 | 4987012 | 4986923 | ID=cds.MS.gene28653.t1;Parent=MS.gene28653.t1 |
| chr7.2 | exon | 4986650 | 4986712 | 4986650 | ID=MS.gene28653.t1.exon6;Parent=MS.gene28653.t1 |
| chr7.2 | CDS | 4986650 | 4986712 | 4986650 | ID=cds.MS.gene28653.t1;Parent=MS.gene28653.t1 |
| chr7.2 | exon | 4984924 | 4986510 | 4984924 | ID=MS.gene28653.t1.exon7;Parent=MS.gene28653.t1 |
| chr7.2 | CDS | 4984924 | 4986510 | 4984924 | ID=cds.MS.gene28653.t1;Parent=MS.gene28653.t1 |
| Gene Sequence |
| Protein sequence |
