AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28911

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28911.t1 MTR_8g074550 90.000 340 32 1 1 338 1 340 0.0 623
MS.gene28911.t1 MTR_5g019580 42.169 332 185 5 8 333 7 337 2.90e-81 257
MS.gene28911.t1 MTR_5g019580 40.964 332 161 7 8 333 59 361 1.24e-68 224
MS.gene28911.t1 MTR_7g117170 39.275 331 184 9 6 329 13 333 3.36e-64 212
MS.gene28911.t1 MTR_8g027885 35.583 326 197 5 6 329 16 330 5.74e-57 193
MS.gene28911.t1 MTR_0078s0010 38.769 325 182 9 3 320 1 315 7.37e-56 190
MS.gene28911.t1 MTR_8g009055 36.858 331 194 8 5 329 3 324 1.25e-55 189
MS.gene28911.t1 MTR_8g009050 37.994 329 187 9 8 329 6 324 5.42e-55 187
MS.gene28911.t1 MTR_8g027870 35.671 328 194 6 6 329 16 330 5.71e-55 188
MS.gene28911.t1 MTR_8g008990 36.556 331 195 8 5 329 3 324 6.76e-55 187
MS.gene28911.t1 MTR_0184s0040 40.184 326 180 8 3 322 16 332 1.11e-54 187
MS.gene28911.t1 MTR_0078s0190 40.184 326 180 8 3 322 16 332 1.11e-54 187
MS.gene28911.t1 MTR_7g047030 38.658 313 176 8 3 308 1 304 1.98e-53 184
MS.gene28911.t1 MTR_7g047270 38.658 313 176 8 3 308 1 304 1.98e-53 184
MS.gene28911.t1 MTR_0078s0060 39.628 323 181 8 3 320 1 314 8.30e-53 182
MS.gene28911.t1 MTR_8g009063 36.688 308 184 6 5 308 10 310 1.52e-51 179
MS.gene28911.t1 MTR_8g009067 37.383 321 189 7 5 321 3 315 4.40e-51 177
MS.gene28911.t1 MTR_8g009073 37.461 323 186 9 5 321 3 315 2.03e-50 176
MS.gene28911.t1 MTR_8g006270 35.294 323 197 7 8 327 6 319 2.27e-49 173
MS.gene28911.t1 MTR_8g008970 35.826 321 194 7 5 321 3 315 2.51e-49 177
MS.gene28911.t1 MTR_8g008970 38.095 105 59 2 192 295 530 629 3.36e-12 68.6
MS.gene28911.t1 MTR_8g077590 33.121 314 181 8 8 308 9 306 2.54e-48 170
MS.gene28911.t1 MTR_0078s0200 34.675 323 188 9 3 314 1 311 4.54e-47 162
MS.gene28911.t1 MTR_0184s0030 34.663 326 190 9 3 317 1 314 1.58e-46 165
MS.gene28911.t1 MTR_1g019510 34.713 314 192 6 8 317 6 310 3.51e-46 164
MS.gene28911.t1 MTR_6g005600 36.275 306 182 7 8 308 6 303 9.50e-46 163
MS.gene28911.t1 MTR_8g006260 33.333 312 200 4 8 314 6 314 2.47e-45 162
MS.gene28911.t1 MTR_8g006730 31.548 336 204 10 3 327 1 321 3.53e-45 162
MS.gene28911.t1 MTR_8g465670 31.707 328 200 11 9 327 8 320 1.87e-43 157
MS.gene28911.t1 MTR_7g046490 31.975 319 202 8 7 321 5 312 2.60e-43 156
MS.gene28911.t1 MTR_8g006710 32.544 338 186 12 3 321 1 315 3.28e-43 156
MS.gene28911.t1 MTR_8g006230 38.756 209 120 4 112 319 54 255 8.94e-43 150
MS.gene28911.t1 MTR_6g023665 33.233 331 199 11 5 327 10 326 3.81e-42 154
MS.gene28911.t1 MTR_8g006220 32.143 336 204 11 9 335 7 327 5.55e-42 153
MS.gene28911.t1 MTR_8g012635 31.953 338 199 10 3 324 1 323 2.15e-41 151
MS.gene28911.t1 MTR_8g012745 32.588 313 197 6 3 308 1 306 6.34e-41 150
MS.gene28911.t1 MTR_6g488280 33.229 319 193 10 9 319 7 313 6.36e-41 150
MS.gene28911.t1 MTR_0428s0010 33.229 319 193 10 9 319 7 313 6.36e-41 150
MS.gene28911.t1 MTR_8g009067 39.409 203 116 3 121 322 2 198 6.93e-37 137
MS.gene28911.t1 MTR_8g012650 37.931 203 118 4 109 308 109 306 1.00e-36 139
MS.gene28911.t1 MTR_6g033625 32.716 324 179 13 9 309 5 312 1.09e-36 139
MS.gene28911.t1 MTR_6g033660 32.198 323 185 9 9 311 5 313 4.44e-36 137
MS.gene28911.t1 MTR_3g009510 31.949 313 193 10 9 308 6 311 1.30e-35 136
MS.gene28911.t1 MTR_6g033725 32.915 319 182 11 9 309 5 309 1.09e-33 130
MS.gene28911.t1 MTR_6g033615 33.123 317 173 12 9 309 5 298 1.55e-33 130
MS.gene28911.t1 MTR_6g033675 30.909 330 200 9 9 319 5 325 2.74e-33 129
MS.gene28911.t1 MTR_5g098930 26.537 309 212 9 5 308 2 300 5.33e-32 125
MS.gene28911.t1 MTR_8g009073 39.267 191 105 5 134 321 4 186 6.38e-31 120
MS.gene28911.t1 MTR_5g090700 29.012 324 208 10 5 315 2 316 6.93e-30 120
MS.gene28911.t1 MTR_5g070040 25.472 318 220 7 2 309 5 315 9.54e-29 117
MS.gene28911.t1 MTR_5g090610 27.707 314 195 10 5 308 2 293 1.47e-28 116
MS.gene28911.t1 MTR_5g090600 28.902 346 222 11 5 339 2 334 4.49e-28 114
MS.gene28911.t1 MTR_5g070090 27.445 317 207 10 2 305 5 311 3.32e-27 112
MS.gene28911.t1 MTR_5g090630 26.861 309 209 8 5 308 2 298 4.18e-27 112
MS.gene28911.t1 MTR_2g040530 28.313 332 203 11 9 322 6 320 8.19e-27 111
MS.gene28911.t1 MTR_2g046750 27.900 319 193 9 9 308 6 306 7.17e-25 105
MS.gene28911.t1 MTR_6g078320 30.864 324 192 13 8 308 11 325 3.00e-24 104
MS.gene28911.t1 MTR_4g082820 30.671 313 194 11 8 308 7 308 5.45e-24 103
MS.gene28911.t1 MTR_5g090670 27.052 329 214 12 5 318 2 319 7.71e-24 102
MS.gene28911.t1 MTR_4g082810 31.310 313 195 12 8 308 7 311 4.17e-23 100
MS.gene28911.t1 MTR_2g046820 29.747 316 190 12 9 309 6 304 7.33e-23 100
MS.gene28911.t1 MTR_8g012730 31.351 185 100 3 145 327 4 163 1.94e-22 96.7
MS.gene28911.t1 MTR_5g090620 25.926 324 216 11 5 315 2 314 2.12e-22 98.6
MS.gene28911.t1 MTR_6g005660 32.046 259 164 6 8 261 6 257 1.33e-21 93.2
MS.gene28911.t1 MTR_0036s0220 27.515 338 193 14 7 308 11 332 1.54e-21 96.3
MS.gene28911.t1 MTR_5g090660 25.146 342 219 13 5 325 2 327 2.86e-21 95.9
MS.gene28911.t1 MTR_5g090580 25.836 329 216 12 5 318 2 317 4.22e-21 94.7
MS.gene28911.t1 MTR_5g087620 26.197 355 203 12 5 319 7 342 9.80e-21 94.0
MS.gene28911.t1 MTR_5g464810 28.446 341 184 14 8 308 12 332 2.92e-20 92.4
MS.gene28911.t1 MTR_5g064240 28.446 341 184 14 8 308 12 332 2.92e-20 92.4
MS.gene28911.t1 MTR_6g038230 28.448 348 190 14 8 326 11 328 5.11e-20 91.7
MS.gene28911.t1 MTR_6g038200 26.571 350 194 14 8 326 11 328 5.72e-20 91.3
MS.gene28911.t1 MTR_5g464760 24.776 335 208 10 7 308 11 334 1.60e-19 90.1
MS.gene28911.t1 MTR_3g008010 25.074 339 202 13 7 308 9 332 2.44e-19 89.7
MS.gene28911.t1 MTR_6g014220 26.371 383 236 17 5 356 7 374 4.63e-19 89.0
MS.gene28911.t1 MTR_6g014290 24.047 341 207 14 5 308 7 332 9.43e-19 87.8
MS.gene28911.t1 MTR_6g038220 27.457 346 197 14 7 326 10 327 1.71e-18 87.0
MS.gene28911.t1 MTR_4g094220 25.337 371 215 15 7 336 6 355 2.81e-18 86.7
MS.gene28911.t1 MTR_0288s0020 24.699 332 199 10 5 308 7 315 2.95e-18 86.3
MS.gene28911.t1 MTR_6g013440 26.023 342 201 13 5 308 8 335 3.53e-17 83.2
MS.gene28911.t1 MTR_7g070800 26.549 339 204 14 8 320 6 325 4.51e-17 82.8
MS.gene28911.t1 MTR_7g055710 23.907 343 211 9 8 320 11 333 6.31e-17 82.4
MS.gene28911.t1 MTR_6g014020 23.291 395 235 16 5 356 7 376 6.62e-17 82.4
MS.gene28911.t1 MTR_2g098430 25.904 332 211 12 9 319 7 324 9.12e-17 82.0
MS.gene28911.t1 MTR_5g035580 26.269 335 178 13 8 310 13 310 1.03e-16 81.6
MS.gene28911.t1 MTR_6g014186 26.023 342 201 15 5 308 4 331 1.04e-16 81.6
MS.gene28911.t1 MTR_5g035560 25.672 335 176 12 8 308 11 306 1.10e-16 81.6
MS.gene28911.t1 MTR_7g011470 27.108 332 196 11 5 308 7 320 1.56e-16 81.3
MS.gene28911.t1 MTR_6g014250 25.075 335 205 12 8 308 10 332 1.80e-16 80.9
MS.gene28911.t1 MTR_0009s0240 26.019 319 205 12 8 311 7 309 2.15e-16 80.9
MS.gene28911.t1 MTR_7g070940 26.567 335 203 14 8 320 9 322 2.66e-16 80.5
MS.gene28911.t1 MTR_1g032490 25.078 319 210 11 8 308 10 317 4.78e-16 79.7
MS.gene28911.t1 MTR_7g070860 26.606 327 195 14 8 308 7 314 9.40e-16 79.0
MS.gene28911.t1 MTR_3g031400 26.032 315 202 10 8 313 18 310 1.52e-15 78.2
MS.gene28911.t1 MTR_3g009500 27.273 253 164 8 9 247 6 252 1.77e-15 76.3
MS.gene28911.t1 MTR_5g072860 26.347 334 203 11 8 318 18 331 1.84e-15 77.8
MS.gene28911.t1 MTR_7g070810 25.075 335 209 12 8 320 9 323 2.35e-15 77.8
MS.gene28911.t1 MTR_7g070610 25.000 348 215 14 1 320 6 335 3.23e-15 77.4
MS.gene28911.t1 MTR_7g011470 26.667 330 196 11 5 308 7 316 4.17e-15 77.0
MS.gene28911.t1 MTR_7g070930 26.048 334 192 14 8 308 14 325 4.53e-15 77.0
MS.gene28911.t1 MTR_8g012630 31.795 195 120 7 3 188 1 191 4.98e-15 76.3
MS.gene28911.t1 MTR_8g012630 44.928 69 37 1 260 327 202 270 4.99e-12 67.4
MS.gene28911.t1 MTR_3g069710 25.982 331 195 11 2 311 6 307 5.04e-15 76.6
MS.gene28911.t1 MTR_6g052375 29.697 165 108 3 141 302 3 162 6.77e-15 75.1
MS.gene28911.t1 MTR_2g008210 25.070 359 187 15 1 308 1 328 7.27e-15 76.3
MS.gene28911.t1 MTR_8g088560 24.642 349 209 11 4 325 6 327 8.97e-15 75.9
MS.gene28911.t1 MTR_6g014200 26.393 341 197 14 7 308 6 331 1.48e-14 75.1
MS.gene28911.t1 MTR_7g070740 25.672 335 191 14 8 308 11 321 1.51e-14 75.1
MS.gene28911.t1 MTR_5g072830 23.529 323 215 8 8 318 10 312 1.76e-14 74.7
MS.gene28911.t1 MTR_8g059425 23.333 390 239 15 5 356 7 374 2.40e-14 74.7
MS.gene28911.t1 MTR_5g072840 24.691 324 210 9 8 318 10 312 3.06e-14 74.3
MS.gene28911.t1 MTR_6g014150 27.515 338 201 14 5 308 4 331 3.77e-14 73.9
MS.gene28911.t1 MTR_6g038300 24.924 329 196 12 7 310 10 312 4.14e-14 73.9
MS.gene28911.t1 MTR_3g479520 23.342 377 240 14 1 340 1 365 5.52e-14 73.6
MS.gene28911.t1 MTR_4g485630 25.538 325 204 13 8 311 9 316 5.56e-14 73.6
MS.gene28911.t1 MTR_3g009520 28.125 256 166 8 9 251 7 257 6.57e-14 71.6
MS.gene28911.t1 MTR_7g071040 23.901 364 210 15 8 337 17 347 9.71e-14 72.8
MS.gene28911.t1 MTR_3g049970 24.324 333 211 13 6 314 7 322 1.14e-13 72.4
MS.gene28911.t1 MTR_7g070660 24.024 333 218 11 8 320 11 328 1.16e-13 72.4
MS.gene28911.t1 MTR_8g064880 22.928 362 218 11 6 332 7 342 1.73e-13 72.0
MS.gene28911.t1 MTR_4g117950 24.398 332 205 13 5 317 3 307 1.74e-13 72.0
MS.gene28911.t1 MTR_7g070780 23.699 346 216 13 4 320 7 333 1.74e-13 72.0
MS.gene28911.t1 MTR_8g071070 25.373 335 214 12 8 319 7 328 1.81e-13 72.0
MS.gene28911.t1 MTR_7g102560 24.316 329 203 12 8 308 9 319 1.94e-13 72.0
MS.gene28911.t1 MTR_5g072820 24.540 326 208 10 8 318 10 312 2.46e-13 71.2
MS.gene28911.t1 MTR_5g072810 23.926 326 213 10 8 318 12 317 2.49e-13 71.2
MS.gene28911.t1 MTR_6g038240 24.781 343 211 12 7 326 10 328 2.58e-13 71.2
MS.gene28911.t1 MTR_3g031450 24.611 321 201 11 8 313 18 312 3.05e-13 71.2
MS.gene28911.t1 MTR_1g107285 24.169 331 208 10 1 305 1 314 3.25e-13 71.2
MS.gene28911.t1 MTR_7g013180 26.023 342 218 13 7 330 4 328 3.37e-13 70.9
MS.gene28911.t1 MTR_7g102520 20.963 353 235 9 3 326 7 344 3.41e-13 71.2
MS.gene28911.t1 MTR_4g095008 25.228 329 214 13 8 319 11 324 4.01e-13 70.9
MS.gene28911.t1 MTR_5g045970 23.599 339 198 13 8 310 16 329 4.47e-13 70.9
MS.gene28911.t1 MTR_5g058320 23.276 348 195 13 2 308 3 319 5.50e-13 70.5
MS.gene28911.t1 MTR_1g019520 56.140 57 25 0 261 317 3 59 5.55e-13 68.2
MS.gene28911.t1 MTR_8g064870 23.708 329 206 11 6 309 9 317 5.84e-13 70.5
MS.gene28911.t1 MTR_3g069690 24.765 319 211 8 1 308 1 301 7.81e-13 69.7
MS.gene28911.t1 MTR_6g014040 25.000 340 208 14 5 308 7 335 1.06e-12 69.7
MS.gene28911.t1 MTR_5g075440 23.653 334 198 11 8 313 10 314 1.78e-12 68.9
MS.gene28911.t1 MTR_4g064987 26.168 321 190 15 9 308 9 303 1.86e-12 68.6
MS.gene28911.t1 MTR_7g080900 24.857 350 205 13 5 326 9 328 2.70e-12 68.2
MS.gene28911.t1 MTR_6g014187 22.319 345 210 12 5 308 7 334 2.71e-12 68.2
MS.gene28911.t1 MTR_7g070870 24.850 334 204 14 7 320 24 330 2.79e-12 68.2
MS.gene28911.t1 MTR_1g107315 23.692 325 207 11 8 308 8 315 3.70e-12 67.8
MS.gene28911.t1 MTR_6g013450 21.676 346 219 11 2 308 3 335 4.71e-12 67.4
MS.gene28911.t1 MTR_3g084520 26.471 340 182 15 8 308 6 316 5.13e-12 67.4
MS.gene28911.t1 MTR_0536s0020 26.019 319 183 12 18 313 28 316 5.15e-12 67.4
MS.gene28911.t1 MTR_4g031800 25.449 334 206 11 5 316 6 318 6.10e-12 67.4
MS.gene28911.t1 MTR_6g014270 23.442 337 214 10 7 308 6 333 8.84e-12 66.6
MS.gene28911.t1 MTR_3g079480 22.678 366 241 10 5 340 18 371 8.90e-12 66.6
MS.gene28911.t1 MTR_1g062380 20.783 332 217 10 8 310 16 330 8.91e-12 66.6
MS.gene28911.t1 MTR_5g045960 23.780 328 211 10 5 307 6 319 9.56e-12 66.6
MS.gene28911.t1 MTR_6g013680 25.541 231 140 7 101 308 60 281 1.08e-11 66.2
MS.gene28911.t1 MTR_7g013200 40.506 79 45 1 243 319 229 307 1.40e-11 65.9
MS.gene28911.t1 MTR_6g014310 25.188 266 157 11 101 340 114 363 1.61e-11 65.9
MS.gene28911.t1 MTR_6g014050 28.105 153 87 4 170 308 192 335 1.69e-11 65.9
MS.gene28911.t1 MTR_7g102460 20.606 330 217 7 8 308 9 322 2.19e-11 65.5
MS.gene28911.t1 MTR_5g027210 31.008 129 66 3 201 313 205 326 2.23e-11 65.5
MS.gene28911.t1 MTR_8g066610 25.000 340 201 14 6 311 7 326 2.34e-11 65.5
MS.gene28911.t1 MTR_4g064987 25.237 317 192 14 9 308 9 297 3.27e-11 64.7
MS.gene28911.t1 MTR_6g013435 28.922 204 118 10 122 308 12 205 3.81e-11 63.9
MS.gene28911.t1 MTR_4g094920 27.139 339 202 16 5 319 22 339 4.28e-11 64.7
MS.gene28911.t1 MTR_4g485640 22.857 315 203 10 10 307 211 502 4.33e-11 64.7
MS.gene28911.t1 MTR_3g479490 21.493 335 216 10 8 308 6 327 5.15e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28911.t1 AT2G18570 45.395 304 161 5 7 308 4 304 9.69e-90 278
MS.gene28911.t1 AT3G50740 38.871 319 191 3 7 324 6 321 1.14e-82 260
MS.gene28911.t1 AT5G26310 40.317 315 181 3 7 321 6 313 2.03e-81 257
MS.gene28911.t1 AT5G66690 37.500 320 193 3 7 326 6 318 3.01e-76 244
MS.gene28911.t1 AT2G18560 47.005 217 112 2 92 308 1 214 2.06e-64 210
MS.gene28911.t1 AT4G01070 37.048 332 195 7 1 327 1 323 6.48e-63 205
MS.gene28911.t1 AT1G01390 36.697 327 195 6 7 329 7 325 7.80e-63 209
MS.gene28911.t1 AT1G01390 36.697 327 195 6 7 329 24 342 1.71e-62 208
MS.gene28911.t1 AT4G01070 37.048 332 195 7 1 327 1 323 4.02e-62 207
MS.gene28911.t1 AT1G01420 36.280 328 195 7 7 329 7 325 4.02e-60 201
MS.gene28911.t1 AT1G01420 36.280 328 195 7 7 329 10 328 4.04e-60 202
MS.gene28911.t1 AT4G36770 36.508 315 192 5 8 320 4 312 2.97e-56 191
MS.gene28911.t1 AT3G16520 29.773 309 201 6 9 308 6 307 3.82e-32 126
MS.gene28911.t1 AT3G16520 29.773 309 201 6 9 308 6 307 4.42e-32 125
MS.gene28911.t1 AT3G16520 29.773 309 201 6 9 308 6 307 5.07e-32 125
MS.gene28911.t1 AT1G07250 28.443 334 200 13 3 310 1 321 1.02e-24 105
MS.gene28911.t1 AT2G29730 25.714 315 211 9 9 308 6 312 2.25e-23 101
MS.gene28911.t1 AT3G21790 26.829 328 198 10 9 311 5 315 9.03e-23 100
MS.gene28911.t1 AT3G21760 26.036 338 195 11 9 313 5 320 6.29e-22 97.4
MS.gene28911.t1 AT2G30140 27.500 320 204 7 8 317 13 314 1.14e-21 96.3
MS.gene28911.t1 AT3G21750 26.183 317 205 9 8 311 4 304 1.41e-21 96.3
MS.gene28911.t1 AT2G30140 27.414 321 204 7 8 317 13 315 1.81e-21 95.9
MS.gene28911.t1 AT4G15280 26.266 316 211 10 9 311 5 311 6.37e-21 94.4
MS.gene28911.t1 AT4G15280 26.266 316 211 10 9 311 37 343 1.13e-20 94.0
MS.gene28911.t1 AT2G29750 24.159 327 213 9 8 310 8 323 4.77e-20 92.0
MS.gene28911.t1 AT2G29710 24.138 319 210 10 9 308 6 311 7.23e-20 91.3
MS.gene28911.t1 AT1G22360 25.075 335 204 11 8 308 10 331 9.12e-20 90.9
MS.gene28911.t1 AT1G22400 25.588 340 203 13 5 308 10 335 1.07e-19 90.9
MS.gene28911.t1 AT1G22360 25.075 335 204 11 8 308 10 331 1.28e-19 90.5
MS.gene28911.t1 AT3G21780 23.839 323 207 10 8 311 4 306 1.39e-19 90.5
MS.gene28911.t1 AT2G31790 26.554 354 209 11 1 328 1 329 2.34e-19 89.7
MS.gene28911.t1 AT2G29740 24.620 329 205 10 8 308 8 321 2.41e-19 89.7
MS.gene28911.t1 AT2G36970 24.860 358 224 13 5 336 7 345 2.44e-18 86.7
MS.gene28911.t1 AT1G07240 24.702 336 218 13 5 316 2 326 3.17e-18 86.3
MS.gene28911.t1 AT1G51210 25.949 316 201 9 7 308 19 315 3.26e-18 86.3
MS.gene28911.t1 AT1G22340 25.000 348 206 14 7 315 12 343 6.07e-18 85.5
MS.gene28911.t1 AT1G22370 26.888 331 200 13 7 308 12 329 7.12e-18 85.5
MS.gene28911.t1 AT1G10400 25.356 351 226 14 8 336 7 343 1.15e-17 84.7
MS.gene28911.t1 AT1G07260 24.695 328 209 11 8 310 6 320 1.43e-17 84.3
MS.gene28911.t1 AT2G30150 26.006 323 207 9 8 317 13 316 3.21e-17 83.2
MS.gene28911.t1 AT1G78270 26.901 342 196 13 5 309 10 334 9.68e-17 82.0
MS.gene28911.t1 AT5G03490 25.225 333 191 12 5 308 16 319 1.04e-16 81.6
MS.gene28911.t1 AT5G05900 26.866 335 196 12 1 311 1 310 2.23e-16 80.9
MS.gene28911.t1 AT3G21800 26.524 328 195 12 9 311 6 312 2.76e-16 80.5
MS.gene28911.t1 AT2G28080 27.751 209 129 6 111 308 128 325 3.71e-16 80.1
MS.gene28911.t1 AT4G15480 31.776 214 117 9 109 308 126 324 5.12e-16 79.7
MS.gene28911.t1 AT2G15480 27.164 335 195 14 8 310 10 327 6.04e-16 79.7
MS.gene28911.t1 AT2G15480 27.164 335 195 14 8 310 10 327 6.34e-16 79.3
MS.gene28911.t1 AT2G30150 25.633 316 203 9 15 317 4 300 1.50e-15 78.2
MS.gene28911.t1 AT2G31750 24.260 338 203 13 8 319 8 318 1.63e-15 78.2
MS.gene28911.t1 AT2G31750 24.260 338 203 13 8 319 8 318 1.69e-15 78.2
MS.gene28911.t1 AT1G73880 26.286 350 208 13 8 333 14 337 1.77e-15 78.2
MS.gene28911.t1 AT2G16890 25.740 338 207 10 8 319 9 328 1.97e-15 77.8
MS.gene28911.t1 AT2G16890 25.740 338 207 10 8 319 9 328 2.68e-15 77.4
MS.gene28911.t1 AT1G22380 23.145 337 210 12 7 308 12 334 4.61e-15 77.0
MS.gene28911.t1 AT5G59590 24.062 320 203 11 5 308 7 302 5.72e-15 76.3
MS.gene28911.t1 AT4G34135 25.143 350 205 12 4 317 7 335 5.93e-15 75.5
MS.gene28911.t1 AT3G55700 25.688 327 200 12 1 308 1 303 9.66e-15 75.9
MS.gene28911.t1 AT2G15490 26.163 344 204 14 8 316 7 335 1.97e-14 75.1
MS.gene28911.t1 AT2G15490 26.364 330 198 13 8 307 7 321 2.69e-14 74.3
MS.gene28911.t1 AT4G34131 26.331 338 210 12 2 312 4 329 2.79e-14 74.3
MS.gene28911.t1 AT1G05675 22.324 327 217 9 8 315 6 314 4.02e-14 73.9
MS.gene28911.t1 AT1G24100 25.309 324 197 12 8 308 11 312 5.62e-14 73.6
MS.gene28911.t1 AT4G34135 25.073 343 200 12 4 310 7 328 7.11e-14 73.2
MS.gene28911.t1 AT3G46670 25.382 327 184 14 8 308 9 301 8.80e-14 72.8
MS.gene28911.t1 AT5G12890 34.091 132 78 2 204 333 221 345 2.64e-13 71.6
MS.gene28911.t1 AT3G46700 26.198 313 195 12 8 308 9 297 3.33e-13 70.9
MS.gene28911.t1 AT5G05880 25.378 331 186 12 8 311 8 304 7.51e-13 70.1
MS.gene28911.t1 AT4G15260 27.805 205 132 7 117 315 1 195 7.74e-13 69.3
MS.gene28911.t1 AT5G05890 25.758 330 194 13 8 313 8 310 8.93e-13 69.7
MS.gene28911.t1 AT3G53160 23.952 334 213 11 1 308 1 319 1.73e-12 68.9
MS.gene28911.t1 AT2G36750 23.494 332 213 13 4 309 5 321 3.33e-12 68.2
MS.gene28911.t1 AT5G38010 23.692 325 197 12 8 308 10 307 3.56e-12 67.8
MS.gene28911.t1 AT1G05680 22.671 322 212 10 8 310 6 309 3.86e-12 67.8
MS.gene28911.t1 AT3G11340 24.684 316 198 10 7 308 8 297 4.60e-12 67.4
MS.gene28911.t1 AT5G59580 23.344 317 202 11 8 308 9 300 4.75e-12 67.4
MS.gene28911.t1 AT3G55710 24.850 334 198 11 1 308 1 307 5.00e-12 67.4
MS.gene28911.t1 AT2G36800 23.284 335 207 12 6 309 10 325 8.01e-12 67.0
MS.gene28911.t1 AT5G05870 25.672 335 196 14 8 316 8 315 3.15e-11 65.1
MS.gene28911.t1 AT5G49690 24.845 322 201 12 8 308 10 311 3.27e-11 65.1
MS.gene28911.t1 AT2G43840 26.667 345 185 15 8 322 7 313 3.59e-11 64.7
MS.gene28911.t1 AT5G05860 23.919 347 225 10 8 340 9 330 4.30e-11 64.7
MS.gene28911.t1 AT2G36780 23.333 330 210 10 8 310 14 327 4.44e-11 64.7
MS.gene28911.t1 AT3G46650 24.437 311 196 12 8 311 10 288 7.06e-11 63.9
MS.gene28911.t1 AT2G43820 33.333 135 65 5 202 322 190 313 9.04e-11 63.5

Find 112 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGTTACTCTTCCCATTT+TGG 0.177198 8.2:+30232602 None:intergenic
AACTAAAATGGCGTCGCTTT+TGG 0.229411 8.2:+30233332 None:intergenic
TTTGGTGAGAAAGGTTATTT+TGG 0.236778 8.2:-30232629 MS.gene28911:CDS
ATTTCGGAATGTTGAGTTCT+AGG 0.237374 8.2:+30233565 None:intergenic
TAAGTGAACAAAGATTTATT+TGG 0.243125 8.2:-30233050 MS.gene28911:CDS
AAATGTTTGGTGATGGGATT+TGG 0.252930 8.2:+30233742 None:intergenic
GTGCAAACGGTGGCGGCAAC+GGG 0.260262 8.2:+30233708 None:intergenic
GTTCGTGTACTCTCCTGTTT+TGG 0.300100 8.2:-30233505 MS.gene28911:CDS
CAAATGAAGGAAATAGCTTT+TGG 0.303622 8.2:-30233081 MS.gene28911:CDS
GCTCTCATTGTCGACATATT+CGG 0.303837 8.2:-30233609 MS.gene28911:CDS
GATAGCAAGTTTGGTGAGAA+AGG 0.326332 8.2:-30232638 MS.gene28911:CDS
ATCCCACGTGTTAACTAAAA+TGG 0.327645 8.2:+30233320 None:intergenic
GAGATTCAGTGTGTGAAGTT+TGG 0.337336 8.2:+30233808 None:intergenic
GTTTGAAATTGTGGTGGATT+TGG 0.339642 8.2:+30233853 None:intergenic
AAGTGAACAAAGATTTATTT+GGG 0.340178 8.2:-30233049 MS.gene28911:CDS
TGTATTTGCAGTTGGCCCTT+TGG 0.347552 8.2:-30233226 MS.gene28911:CDS
GAGGGAAGAGATAGCAAGTT+TGG 0.356548 8.2:-30232647 MS.gene28911:CDS
ATTAGATCAACCAAGTCATT+TGG 0.371760 8.2:+30233411 None:intergenic
GAAGCTACGTAAATGAATTT+CGG 0.373868 8.2:+30233549 None:intergenic
ACATAAACCACTAATTCCTT+TGG 0.374298 8.2:+30233138 None:intergenic
TCGATTTGTTTATCCAAAAC+AGG 0.374324 8.2:+30233492 None:intergenic
GTTTGTGAGTGCAGATTTGA+TGG 0.374674 8.2:+30233650 None:intergenic
TTAGTGGTTTATGTTTCGTT+TGG 0.378408 8.2:-30233129 MS.gene28911:CDS
AGACAAACCGAGTCAGAAAT+AGG 0.382185 8.2:-30233201 MS.gene28911:CDS
TAGTGGTTTATGTTTCGTTT+GGG 0.396567 8.2:-30233128 MS.gene28911:CDS
TAAACAACCAAAGGAATTAG+TGG 0.400496 8.2:-30233145 MS.gene28911:CDS
AGATTCAGTGTGTGAAGTTT+GGG 0.415959 8.2:+30233809 None:intergenic
GGTGCAAACGGTGGCGGCAA+CGG 0.424108 8.2:+30233707 None:intergenic
GGGAGGAAGGAGGAAATGTT+TGG 0.427268 8.2:+30233729 None:intergenic
CGCGTCCACAGGCAAATCTA+TGG 0.435492 8.2:-30233019 MS.gene28911:CDS
GGCGGCAACGGGGAGGAAGG+AGG 0.444660 8.2:+30233719 None:intergenic
GAGTTCTAGGGCTAAGGGTA+GGG 0.446249 8.2:+30233578 None:intergenic
AAACAGGAGAGTACACGAAC+AGG 0.448658 8.2:+30233508 None:intergenic
GAAAGAACCTTTGAAAATCC+CGG 0.453527 8.2:-30233451 MS.gene28911:CDS
CGTTTAGCAAGCTCGATGAT+AGG 0.456423 8.2:+30233879 None:intergenic
TTTCGGAATGTTGAGTTCTA+GGG 0.459746 8.2:+30233566 None:intergenic
TTACTTTCAAGCCCAGGTCT+AGG 0.464566 8.2:-30233912 MS.gene28911:CDS
TTTACGTAGCTTCACATGCT+TGG 0.464918 8.2:-30233539 MS.gene28911:CDS
CTACCGAGTTCGTAATTCAA+TGG 0.467890 8.2:-30233173 MS.gene28911:CDS
GGTGGCGGCAACGGGGAGGA+AGG 0.484457 8.2:+30233716 None:intergenic
AGCTTGACCTATTTCTGACT+CGG 0.486039 8.2:+30233194 None:intergenic
ATGGATTGGTGGCAGATTTG+AGG 0.488336 8.2:+30233781 None:intergenic
GGCATGAGATGGCCTAGACC+TGG 0.488890 8.2:+30233900 None:intergenic
GAAGAATCAGCTGGTGGGGA+GGG 0.492082 8.2:-30232665 MS.gene28911:CDS
AAAGGGCCAACTGCAAATAC+AGG 0.494277 8.2:+30233228 None:intergenic
AATGTTGAGTTCTAGGGCTA+AGG 0.496282 8.2:+30233572 None:intergenic
AGGAGGAAATGTTTGGTGAT+GGG 0.496631 8.2:+30233736 None:intergenic
CTTTATACTCCAAGTTGGTC+CGG 0.497475 8.2:+30233382 None:intergenic
GGATTGTGAGTTTGAAATTG+TGG 0.502808 8.2:+30233844 None:intergenic
AAGGAGGAAATGTTTGGTGA+TGG 0.503049 8.2:+30233735 None:intergenic
AAAGTTCCTGTATTTGCAGT+TGG 0.513811 8.2:-30233234 MS.gene28911:CDS
AATGAGAGCGGAAGGTGGGA+GGG 0.516077 8.2:+30233623 None:intergenic
TATGTTTCGTTTGGGAGCGG+TGG 0.517432 8.2:-30233120 MS.gene28911:CDS
TGGTTGATCTAATGCTGGAC+CGG 0.520095 8.2:-30233401 MS.gene28911:CDS
GGAAGCAGTGGTGACGCGTT+TGG 0.522891 8.2:-30232976 MS.gene28911:CDS
TAGAAAGATGCGGGTGCAAA+CGG 0.525059 8.2:+30233695 None:intergenic
TGCAGATTTGATGGAAGGTA+TGG 0.525881 8.2:+30233659 None:intergenic
AAAGCACTTAATGATGAAGA+TGG 0.528111 8.2:-30233276 MS.gene28911:CDS
CCCACCAGCTGATTCTTCCT+CGG 0.528438 8.2:+30232670 None:intergenic
AATGCTGGACCGGACCAACT+TGG 0.528888 8.2:-30233391 MS.gene28911:CDS
CAATGAGAGCGGAAGGTGGG+AGG 0.529033 8.2:+30233622 None:intergenic
TGACTTGGTTGATCTAATGC+TGG 0.530697 8.2:-30233406 MS.gene28911:CDS
GACTCGGTTTGTCTAACCAA+AGG 0.532401 8.2:+30233210 None:intergenic
TGGATGATGTTGTAGAGTGA+TGG 0.532998 8.2:+30233762 None:intergenic
AAAGAACCTTTGAAAATCCC+GGG 0.537430 8.2:-30233450 MS.gene28911:CDS
ATGAGAGCGGAAGGTGGGAG+GGG 0.538267 8.2:+30233624 None:intergenic
GATGCGGGTGCAAACGGTGG+CGG 0.539136 8.2:+30233701 None:intergenic
GGTTGAATTGATTTACAACC+CGG 0.541344 8.2:+30233432 None:intergenic
ATCAATTCAACCAAATGACT+TGG 0.547736 8.2:-30233421 MS.gene28911:CDS
CGAGGAAGAATCAGCTGGTG+GGG 0.549438 8.2:-30232669 MS.gene28911:CDS
TGCAAACGGTGGCGGCAACG+GGG 0.550346 8.2:+30233709 None:intergenic
TGAGTTCTAGGGCTAAGGGT+AGG 0.552736 8.2:+30233577 None:intergenic
TGGGTGGTACGCGCGTCCAC+AGG 0.557744 8.2:-30233030 MS.gene28911:CDS
GGAAGAATCAGCTGGTGGGG+AGG 0.563505 8.2:-30232666 MS.gene28911:CDS
ATGTTGAGTTCTAGGGCTAA+GGG 0.566059 8.2:+30233573 None:intergenic
ACTCGGTTTGTCTAACCAAA+GGG 0.566531 8.2:+30233211 None:intergenic
GATGAACTTGATGATCAGAT+AGG 0.566730 8.2:-30232952 MS.gene28911:intron
TTTGGAGAGGTTATTGGCTG+CGG 0.567089 8.2:+30233350 None:intergenic
GTCTCCGAGGAAGAATCAGC+TGG 0.569125 8.2:-30232674 MS.gene28911:CDS
TGGCATGGCGGTGAAGACTA+CGG 0.570630 8.2:-30232698 MS.gene28911:CDS
GTGAGTGCAGATTTGATGGA+AGG 0.571046 8.2:+30233654 None:intergenic
GTTTATGTTTCGTTTGGGAG+CGG 0.574120 8.2:-30233123 MS.gene28911:CDS
ACGCATTGTTAGAAAGATGC+GGG 0.576140 8.2:+30233686 None:intergenic
CGACAATGAGAGCGGAAGGT+GGG 0.578158 8.2:+30233619 None:intergenic
AACAGGAGAGTACACGAACA+GGG 0.578357 8.2:+30233509 None:intergenic
CCGAGGAAGAATCAGCTGGT+GGG 0.582919 8.2:-30232670 MS.gene28911:CDS
GATGTTGTAGAGTGATGGAT+TGG 0.587881 8.2:+30233767 None:intergenic
TTGTGAGTTTGAAATTGTGG+TGG 0.595619 8.2:+30233847 None:intergenic
GTACTCTTTATACTCCAAGT+TGG 0.596134 8.2:+30233377 None:intergenic
AAACGGTGGCGGCAACGGGG+AGG 0.600034 8.2:+30233712 None:intergenic
GTTGTAGAGTGATGGATTGG+TGG 0.601250 8.2:+30233770 None:intergenic
GCATGAGATGGCCTAGACCT+GGG 0.602376 8.2:+30233901 None:intergenic
ATGTCGACAATGAGAGCGGA+AGG 0.603846 8.2:+30233615 None:intergenic
GTTGTCTTACTTTCAAGCCC+AGG 0.607161 8.2:-30233918 MS.gene28911:CDS
ATGGCTTGATAAACAACCAA+AGG 0.608472 8.2:-30233154 MS.gene28911:CDS
GCTCGATGATAGGCATGAGA+TGG 0.611212 8.2:+30233889 None:intergenic
CGCGTCACCACTGCTTCCAG+TGG 0.611295 8.2:+30232981 None:intergenic
TGAACAAAGATTTATTTGGG+TGG 0.611330 8.2:-30233046 MS.gene28911:CDS
TCCGAGGAAGAATCAGCTGG+TGG 0.612265 8.2:-30232671 MS.gene28911:CDS
GACGCATTGTTAGAAAGATG+CGG 0.615466 8.2:+30233685 None:intergenic
TTTGTCGTATGAGCAAATGA+AGG 0.617399 8.2:-30233094 MS.gene28911:CDS
GTGTGAAGTTTGGGAAGTGA+TGG 0.631054 8.2:+30233818 None:intergenic
GAATATGTCGACAATGAGAG+CGG 0.641103 8.2:+30233611 None:intergenic
GAAAGTAAGACAACGTGTGG+TGG 0.642771 8.2:+30233927 None:intergenic
TCGACAATGAGAGCGGAAGG+TGG 0.643129 8.2:+30233618 None:intergenic
AAAGATGCGGGTGCAAACGG+TGG 0.650586 8.2:+30233698 None:intergenic
AAGTTTGGGAAGTGATGGCG+AGG 0.653176 8.2:+30233823 None:intergenic
GTTGAATTGATTTACAACCC+GGG 0.663500 8.2:+30233433 None:intergenic
TGAAGACTACGGCGTCTCCG+AGG 0.678769 8.2:-30232687 MS.gene28911:CDS
AAGCCATTGAATTACGAACT+CGG 0.680576 8.2:+30233170 None:intergenic
CTTGAAAGTAAGACAACGTG+TGG 0.705163 8.2:+30233924 None:intergenic
TGCGTCCATAGATTTGCCTG+TGG 0.728501 8.2:+30233014 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTGAACAAAGATTTATTT+GGG - chr8.2:30233500-30233519 MS.gene28911:CDS 20.0%
!! TAAGTGAACAAAGATTTATT+TGG - chr8.2:30233499-30233518 MS.gene28911:CDS 20.0%
! AGAATCAAGAATAAGAATGT+GGG - chr8.2:30233648-30233667 MS.gene28911:CDS 25.0%
ACATAAACCACTAATTCCTT+TGG + chr8.2:30233414-30233433 None:intergenic 30.0%
ATCAATTCAACCAAATGACT+TGG - chr8.2:30233128-30233147 MS.gene28911:CDS 30.0%
ATTAGATCAACCAAGTCATT+TGG + chr8.2:30233141-30233160 None:intergenic 30.0%
GAAGCTACGTAAATGAATTT+CGG + chr8.2:30233003-30233022 None:intergenic 30.0%
GAGAATCAAGAATAAGAATG+TGG - chr8.2:30233647-30233666 MS.gene28911:CDS 30.0%
TAAACAACCAAAGGAATTAG+TGG - chr8.2:30233404-30233423 MS.gene28911:CDS 30.0%
TAGTGGTTTATGTTTCGTTT+GGG - chr8.2:30233421-30233440 MS.gene28911:CDS 30.0%
TGAACAAAGATTTATTTGGG+TGG - chr8.2:30233503-30233522 MS.gene28911:CDS 30.0%
TGTTTCAAAACAGTTACTTG+TGG + chr8.2:30233696-30233715 None:intergenic 30.0%
TTAGTGGTTTATGTTTCGTT+TGG - chr8.2:30233420-30233439 MS.gene28911:CDS 30.0%
! AAAGCACTTAATGATGAAGA+TGG - chr8.2:30233273-30233292 MS.gene28911:CDS 30.0%
! CAAATGAAGGAAATAGCTTT+TGG - chr8.2:30233468-30233487 MS.gene28911:CDS 30.0%
! TCGATTTGTTTATCCAAAAC+AGG + chr8.2:30233060-30233079 None:intergenic 30.0%
! TTTGGTGAGAAAGGTTATTT+TGG - chr8.2:30233920-30233939 MS.gene28911:CDS 30.0%
!! GTTTTGGATAAACAAATCGA+AGG - chr8.2:30233060-30233079 MS.gene28911:CDS 30.0%
!!! TTATTTTGGTGGACCAAAAT+GGG - chr8.2:30233934-30233953 MS.gene28911:CDS 30.0%
AAAGTTCCTGTATTTGCAGT+TGG - chr8.2:30233315-30233334 MS.gene28911:CDS 35.0%
AAGCCATTGAATTACGAACT+CGG + chr8.2:30233382-30233401 None:intergenic 35.0%
AGATTCAGTGTGTGAAGTTT+GGG + chr8.2:30232743-30232762 None:intergenic 35.0%
ATAGGTAAGCATTTACCTGA+GGG - chr8.2:30233615-30233634 MS.gene28911:CDS 35.0%
ATCCCACGTGTTAACTAAAA+TGG + chr8.2:30233232-30233251 None:intergenic 35.0%
ATGGCTTGATAAACAACCAA+AGG - chr8.2:30233395-30233414 MS.gene28911:CDS 35.0%
ATTTCGGAATGTTGAGTTCT+AGG + chr8.2:30232987-30233006 None:intergenic 35.0%
GTACTCTTTATACTCCAAGT+TGG + chr8.2:30233175-30233194 None:intergenic 35.0%
TTTCGGAATGTTGAGTTCTA+GGG + chr8.2:30232986-30233005 None:intergenic 35.0%
TTTGTCGTATGAGCAAATGA+AGG - chr8.2:30233455-30233474 MS.gene28911:CDS 35.0%
! AAAGAACCTTTGAAAATCCC+GGG - chr8.2:30233099-30233118 MS.gene28911:CDS 35.0%
! GAAAGAACCTTTGAAAATCC+CGG - chr8.2:30233098-30233117 MS.gene28911:CDS 35.0%
! GATGAACTTGATGATCAGAT+AGG - chr8.2:30233597-30233616 MS.gene28911:CDS 35.0%
! GGATTGTGAGTTTGAAATTG+TGG + chr8.2:30232708-30232727 None:intergenic 35.0%
! GGTTGAATTGATTTACAACC+CGG + chr8.2:30233120-30233139 None:intergenic 35.0%
! GTTGAATTGATTTACAACCC+GGG + chr8.2:30233119-30233138 None:intergenic 35.0%
! TTGTGAGTTTGAAATTGTGG+TGG + chr8.2:30232705-30232724 None:intergenic 35.0%
!! AAATGTTTGGTGATGGGATT+TGG + chr8.2:30232810-30232829 None:intergenic 35.0%
!! GGGTTTGTTAGTTCATGAAT+GGG - chr8.2:30233668-30233687 MS.gene28911:CDS 35.0%
!! GTTTGAAATTGTGGTGGATT+TGG + chr8.2:30232699-30232718 None:intergenic 35.0%
!! TGGGTTTGTTAGTTCATGAA+TGG - chr8.2:30233667-30233686 MS.gene28911:CDS 35.0%
!! TTTTGTTTCACACTGTGGAT+GGG - chr8.2:30233731-30233750 MS.gene28911:CDS 35.0%
!!! GTTATTTTGGTGGACCAAAA+TGG - chr8.2:30233933-30233952 MS.gene28911:CDS 35.0%
!!! GTTTTGAAACATCCTTCGAT+TGG - chr8.2:30233705-30233724 MS.gene28911:CDS 35.0%
ACGCATTGTTAGAAAGATGC+GGG + chr8.2:30232866-30232885 None:intergenic 40.0%
AGACAAACCGAGTCAGAAAT+AGG - chr8.2:30233348-30233367 MS.gene28911:CDS 40.0%
CTACCGAGTTCGTAATTCAA+TGG - chr8.2:30233376-30233395 MS.gene28911:CDS 40.0%
CTTGAAAGTAAGACAACGTG+TGG + chr8.2:30232628-30232647 None:intergenic 40.0%
GAAACAAAACCACCAATCGA+AGG + chr8.2:30233720-30233739 None:intergenic 40.0%
GAATATGTCGACAATGAGAG+CGG + chr8.2:30232941-30232960 None:intergenic 40.0%
GACGCATTGTTAGAAAGATG+CGG + chr8.2:30232867-30232886 None:intergenic 40.0%
GAGATTCAGTGTGTGAAGTT+TGG + chr8.2:30232744-30232763 None:intergenic 40.0%
GATAGGTAAGCATTTACCTG+AGG - chr8.2:30233614-30233633 MS.gene28911:CDS 40.0%
GCTCTCATTGTCGACATATT+CGG - chr8.2:30232940-30232959 MS.gene28911:intron 40.0%
GTTTATGTTTCGTTTGGGAG+CGG - chr8.2:30233426-30233445 MS.gene28911:CDS 40.0%
GTTTGTGAGTGCAGATTTGA+TGG + chr8.2:30232902-30232921 None:intergenic 40.0%
TAAAGCGGCCAAGCAATAAT+AGG + chr8.2:30233789-30233808 None:intergenic 40.0%
TAGGTAAGCATTTACCTGAG+GGG - chr8.2:30233616-30233635 MS.gene28911:CDS 40.0%
TGCAGATTTGATGGAAGGTA+TGG + chr8.2:30232893-30232912 None:intergenic 40.0%
TGGATGATGTTGTAGAGTGA+TGG + chr8.2:30232790-30232809 None:intergenic 40.0%
TTGAAACATCCTTCGATTGG+TGG - chr8.2:30233708-30233727 MS.gene28911:CDS 40.0%
TTTACGTAGCTTCACATGCT+TGG - chr8.2:30233010-30233029 MS.gene28911:CDS 40.0%
TTTGTTTCACACTGTGGATG+GGG - chr8.2:30233732-30233751 MS.gene28911:CDS 40.0%
! AAGGAGGAAATGTTTGGTGA+TGG + chr8.2:30232817-30232836 None:intergenic 40.0%
! ACTCGGTTTGTCTAACCAAA+GGG + chr8.2:30233341-30233360 None:intergenic 40.0%
! AGGAGGAAATGTTTGGTGAT+GGG + chr8.2:30232816-30232835 None:intergenic 40.0%
! GATAGCAAGTTTGGTGAGAA+AGG - chr8.2:30233911-30233930 MS.gene28911:CDS 40.0%
! GTGCTTGAGAGTATAACCAA+CGG - chr8.2:30233759-30233778 MS.gene28911:CDS 40.0%
! TTACAACCCGGGATTTTCAA+AGG + chr8.2:30233108-30233127 None:intergenic 40.0%
!! AACTAAAATGGCGTCGCTTT+TGG + chr8.2:30233220-30233239 None:intergenic 40.0%
!! AATGTTGAGTTCTAGGGCTA+AGG + chr8.2:30232980-30232999 None:intergenic 40.0%
!! AGCTTGACCTATTTCTGACT+CGG + chr8.2:30233358-30233377 None:intergenic 40.0%
!! ATGTTGAGTTCTAGGGCTAA+GGG + chr8.2:30232979-30232998 None:intergenic 40.0%
!! CTTTATACTCCAAGTTGGTC+CGG + chr8.2:30233170-30233189 None:intergenic 40.0%
!! GATGTTGTAGAGTGATGGAT+TGG + chr8.2:30232785-30232804 None:intergenic 40.0%
!! TGACTTGGTTGATCTAATGC+TGG - chr8.2:30233143-30233162 MS.gene28911:CDS 40.0%
!!! ACGCCATTTTAGTTAACACG+TGG - chr8.2:30233226-30233245 MS.gene28911:CDS 40.0%
!!! CGCCATTTTAGTTAACACGT+GGG - chr8.2:30233227-30233246 MS.gene28911:CDS 40.0%
!!! GGTGAGAAAGGTTATTTTGG+TGG - chr8.2:30233923-30233942 MS.gene28911:CDS 40.0%
!!! GTTTTGTTTCACACTGTGGA+TGG - chr8.2:30233730-30233749 MS.gene28911:CDS 40.0%
AAAGGGCCAACTGCAAATAC+AGG + chr8.2:30233324-30233343 None:intergenic 45.0%
ACGGTGTGCCTATTATTGCT+TGG - chr8.2:30233778-30233797 MS.gene28911:CDS 45.0%
AGCAATAATAGGCACACCGT+TGG + chr8.2:30233778-30233797 None:intergenic 45.0%
ATTCTCTCTACAAACCCCTC+AGG + chr8.2:30233633-30233652 None:intergenic 45.0%
CGTTTAGCAAGCTCGATGAT+AGG + chr8.2:30232673-30232692 None:intergenic 45.0%
GAAAGTAAGACAACGTGTGG+TGG + chr8.2:30232625-30232644 None:intergenic 45.0%
GAGGGAAGAGATAGCAAGTT+TGG - chr8.2:30233902-30233921 MS.gene28911:CDS 45.0%
GTGAGTGCAGATTTGATGGA+AGG + chr8.2:30232898-30232917 None:intergenic 45.0%
GTGTGAAGTTTGGGAAGTGA+TGG + chr8.2:30232734-30232753 None:intergenic 45.0%
GTTGTCTTACTTTCAAGCCC+AGG - chr8.2:30232631-30232650 MS.gene28911:CDS 45.0%
TAGAAAGATGCGGGTGCAAA+CGG + chr8.2:30232857-30232876 None:intergenic 45.0%
TGGTTGATCTAATGCTGGAC+CGG - chr8.2:30233148-30233167 MS.gene28911:CDS 45.0%
TGTATTTGCAGTTGGCCCTT+TGG - chr8.2:30233323-30233342 MS.gene28911:CDS 45.0%
TTACTTTCAAGCCCAGGTCT+AGG - chr8.2:30232637-30232656 MS.gene28911:CDS 45.0%
! AAACAGGAGAGTACACGAAC+AGG + chr8.2:30233044-30233063 None:intergenic 45.0%
! AACAGGAGAGTACACGAACA+GGG + chr8.2:30233043-30233062 None:intergenic 45.0%
! GACTCGGTTTGTCTAACCAA+AGG + chr8.2:30233342-30233361 None:intergenic 45.0%
! GTTCGTGTACTCTCCTGTTT+TGG - chr8.2:30233044-30233063 MS.gene28911:CDS 45.0%
! TTTGGAGAGGTTATTGGCTG+CGG + chr8.2:30233202-30233221 None:intergenic 45.0%
! TTTTTCACCACTGGAAGCAG+TGG - chr8.2:30233561-30233580 MS.gene28911:CDS 45.0%
!! ATGGATTGGTGGCAGATTTG+AGG + chr8.2:30232771-30232790 None:intergenic 45.0%
!! GTTGTAGAGTGATGGATTGG+TGG + chr8.2:30232782-30232801 None:intergenic 45.0%
!!! GGTGGTTTTGTTTCACACTG+TGG - chr8.2:30233726-30233745 MS.gene28911:CDS 45.0%
!!! GTCGCTTTTGGAGAGGTTAT+TGG + chr8.2:30233208-30233227 None:intergenic 45.0%
ATGTCGACAATGAGAGCGGA+AGG + chr8.2:30232937-30232956 None:intergenic 50.0%
GCTCGATGATAGGCATGAGA+TGG + chr8.2:30232663-30232682 None:intergenic 50.0%
GGGAGGAAGGAGGAAATGTT+TGG + chr8.2:30232823-30232842 None:intergenic 50.0%
TATGTTTCGTTTGGGAGCGG+TGG - chr8.2:30233429-30233448 MS.gene28911:CDS 50.0%
TGCGTCCATAGATTTGCCTG+TGG + chr8.2:30233538-30233557 None:intergenic 50.0%
! AAGTTTGGGAAGTGATGGCG+AGG + chr8.2:30232729-30232748 None:intergenic 50.0%
! TATTGCTTGGCCGCTTTACG+CGG - chr8.2:30233791-30233810 MS.gene28911:CDS 50.0%
!! GAGTTCTAGGGCTAAGGGTA+GGG + chr8.2:30232974-30232993 None:intergenic 50.0%
!! TGAGTTCTAGGGCTAAGGGT+AGG + chr8.2:30232975-30232994 None:intergenic 50.0%
!!! AAATGGCGTCGCTTTTGGAG+AGG + chr8.2:30233215-30233234 None:intergenic 50.0%
AAAGATGCGGGTGCAAACGG+TGG + chr8.2:30232854-30232873 None:intergenic 55.0%
AATGAGAGCGGAAGGTGGGA+GGG + chr8.2:30232929-30232948 None:intergenic 55.0%
AATGCTGGACCGGACCAACT+TGG - chr8.2:30233158-30233177 MS.gene28911:CDS 55.0%
AGGATGAATGCGGCGTTGCT+GGG - chr8.2:30233819-30233838 MS.gene28911:CDS 55.0%
ATCCTCTGCTCCGCGTAAAG+CGG + chr8.2:30233804-30233823 None:intergenic 55.0%
CCGAGGAAGAATCAGCTGGT+GGG - chr8.2:30233879-30233898 MS.gene28911:CDS 55.0%
CGACAATGAGAGCGGAAGGT+GGG + chr8.2:30232933-30232952 None:intergenic 55.0%
CGAGGAAGAATCAGCTGGTG+GGG - chr8.2:30233880-30233899 MS.gene28911:CDS 55.0%
CGCGTCCACAGGCAAATCTA+TGG - chr8.2:30233530-30233549 MS.gene28911:CDS 55.0%
GAAGAATCAGCTGGTGGGGA+GGG - chr8.2:30233884-30233903 MS.gene28911:CDS 55.0%
GCATGAGATGGCCTAGACCT+GGG + chr8.2:30232651-30232670 None:intergenic 55.0%
GTCTCCGAGGAAGAATCAGC+TGG - chr8.2:30233875-30233894 MS.gene28911:CDS 55.0%
TCCGAGGAAGAATCAGCTGG+TGG - chr8.2:30233878-30233897 MS.gene28911:CDS 55.0%
TCGACAATGAGAGCGGAAGG+TGG + chr8.2:30232934-30232953 None:intergenic 55.0%
TGGCATGGCGGTGAAGACTA+CGG - chr8.2:30233851-30233870 MS.gene28911:CDS 55.0%
! CCCACCAGCTGATTCTTCCT+CGG + chr8.2:30233882-30233901 None:intergenic 55.0%
! GACGCAGCGTTTTTCACCAC+TGG - chr8.2:30233552-30233571 MS.gene28911:CDS 55.0%
ATGAGAGCGGAAGGTGGGAG+GGG + chr8.2:30232928-30232947 None:intergenic 60.0%
CAATGAGAGCGGAAGGTGGG+AGG + chr8.2:30232930-30232949 None:intergenic 60.0%
CGCGGAGCAGAGGATGAATG+CGG - chr8.2:30233809-30233828 MS.gene28911:CDS 60.0%
GAGGATGAATGCGGCGTTGC+TGG - chr8.2:30233818-30233837 MS.gene28911:CDS 60.0%
GATGAATGCGGCGTTGCTGG+GGG - chr8.2:30233821-30233840 MS.gene28911:CDS 60.0%
GGAAGAATCAGCTGGTGGGG+AGG - chr8.2:30233883-30233902 MS.gene28911:CDS 60.0%
GGATGAATGCGGCGTTGCTG+GGG - chr8.2:30233820-30233839 MS.gene28911:CDS 60.0%
GGCATGAGATGGCCTAGACC+TGG + chr8.2:30232652-30232671 None:intergenic 60.0%
TGAAGACTACGGCGTCTCCG+AGG - chr8.2:30233862-30233881 MS.gene28911:CDS 60.0%
! GGAAGCAGTGGTGACGCGTT+TGG - chr8.2:30233573-30233592 MS.gene28911:CDS 60.0%
CGCGTCACCACTGCTTCCAG+TGG + chr8.2:30233571-30233590 None:intergenic 65.0%
GATGCGGGTGCAAACGGTGG+CGG + chr8.2:30232851-30232870 None:intergenic 65.0%
! GGTGCAAACGGTGGCGGCAA+CGG + chr8.2:30232845-30232864 None:intergenic 65.0%
! GTGCAAACGGTGGCGGCAAC+GGG + chr8.2:30232844-30232863 None:intergenic 65.0%
! TGCAAACGGTGGCGGCAACG+GGG + chr8.2:30232843-30232862 None:intergenic 65.0%
GAATGCGGCGTTGCTGGGGG+AGG - chr8.2:30233824-30233843 MS.gene28911:CDS 70.0%
GCGTTGCTGGGGGAGGAGCT+TGG - chr8.2:30233831-30233850 MS.gene28911:CDS 70.0%
GCTGGGGGAGGAGCTTGGCA+TGG - chr8.2:30233836-30233855 MS.gene28911:CDS 70.0%
GGGGGAGGAGCTTGGCATGG+CGG - chr8.2:30233839-30233858 MS.gene28911:CDS 70.0%
TGGGTGGTACGCGCGTCCAC+AGG - chr8.2:30233519-30233538 MS.gene28911:CDS 70.0%
! AAACGGTGGCGGCAACGGGG+AGG + chr8.2:30232840-30232859 None:intergenic 70.0%
! GGCCGCTTTACGCGGAGCAG+AGG - chr8.2:30233799-30233818 MS.gene28911:CDS 70.0%
GGCGGCAACGGGGAGGAAGG+AGG + chr8.2:30232833-30232852 None:intergenic 75.0%
! GGTGGCGGCAACGGGGAGGA+AGG + chr8.2:30232836-30232855 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 30232607 30233964 30232607 ID=MS.gene28911
chr8.2 mRNA 30232607 30233964 30232607 ID=MS.gene28911.t1;Parent=MS.gene28911
chr8.2 exon 30232953 30233964 30232953 ID=MS.gene28911.t1.exon1;Parent=MS.gene28911.t1
chr8.2 CDS 30232953 30233964 30232953 ID=cds.MS.gene28911.t1;Parent=MS.gene28911.t1
chr8.2 exon 30232607 30232725 30232607 ID=MS.gene28911.t1.exon2;Parent=MS.gene28911.t1
chr8.2 CDS 30232607 30232725 30232607 ID=cds.MS.gene28911.t1;Parent=MS.gene28911.t1
Gene Sequence

>MS.gene28911

ATGGATTTGTACAAGCCACCACACGTTGTCTTACTTTCAAGCCCAGGTCTAGGCCATCTCATGCCTATCATCGAGCTTGCTAAACGCTTCCAAATCCACCACAATTTCAAACTCACAATCCTCGCCATCACTTCCCAAACTTCACACACTGAATCTCAAATCCTCAAATCTGCCACCAATCCATCACTCTACAACATCATCCAAATCCCATCACCAAACATTTCCTCCTTCCTCCCCGTTGCCGCCACCGTTTGCACCCGCATCTTTCTAACAATGCGTCACTCCATACCTTCCATCAAATCTGCACTCACAAACTTACCCCTCCCACCTTCCGCTCTCATTGTCGACATATTCGGAACAGAAGCCCTACCCTTAGCCCTAGAACTCAACATTCCGAAATTCATTTACGTAGCTTCACATGCTTGGTTTCTTTCCCTGTTCGTGTACTCTCCTGTTTTGGATAAACAAATCGAAGGAGAATACATTGAGCAGAAAGAACCTTTGAAAATCCCGGGTTGTAAATCAATTCAACCAAATGACTTGGTTGATCTAATGCTGGACCGGACCAACTTGGAGTATAAAGAGTACTTAGCCGCAGCCAATAACCTCTCCAAAAGCGACGCCATTTTAGTTAACACGTGGGATGAACTTCAACATAGAGAGCTTAAAGCACTTAATGATGAAGATGGAGAATTATCAAGTTTATTGAAAGTTCCTGTATTTGCAGTTGGCCCTTTGGTTAGACAAACCGAGTCAGAAATAGGTCAAGCTACCGAGTTCGTAATTCAATGGCTTGATAAACAACCAAAGGAATTAGTGGTTTATGTTTCGTTTGGGAGCGGTGGAACTTTGTCGTATGAGCAAATGAAGGAAATAGCTTTTGGTTTAGAATTAAGTGAACAAAGATTTATTTGGGTGGTACGCGCGTCCACAGGCAAATCTATGGACGCAGCGTTTTTCACCACTGGAAGCAGTGGTGACGCGTTTGGTGATGAACTTGATGATCAGATAGGTAAGCATTTACCTGAGGGGTTTGTAGAGAGAATCAAGAATAAGAATGTGGGTTTGTTAGTTCATGAATGGGCACCACAAGTAACTGTTTTGAAACATCCTTCGATTGGTGGTTTTGTTTCACACTGTGGATGGGGTTCTGTGCTTGAGAGTATAACCAACGGTGTGCCTATTATTGCTTGGCCGCTTTACGCGGAGCAGAGGATGAATGCGGCGTTGCTGGGGGAGGAGCTTGGCATGGCGGTGAAGACTACGGCGTCTCCGAGGAAGAATCAGCTGGTGGGGAGGGAAGAGATAGCAAGTTTGGTGAGAAAGGTTATTTTGGTGGACCAAAATGGGAAGAGTAA
Protein sequence

>MS.gene28911.t1

MDLYKPPHVVLLSSPGLGHLMPIIELAKRFQIHHNFKLTILAITSQTSHTESQILKSATNPSLYNIIQIPSPNISSFLPVAATVCTRIFLTMRHSIPSIKSALTNLPLPPSALIVDIFGTEALPLALELNIPKFIYVASHAWFLSLFVYSPVLDKQIEGEYIEQKEPLKIPGCKSIQPNDLVDLMLDRTNLEYKEYLAAANNLSKSDAILVNTWDELQHRELKALNDEDGELSSLLKVPVFAVGPLVRQTESEIGQATEFVIQWLDKQPKELVVYVSFGSGGTLSYEQMKEIAFGLELSEQRFIWVVRASTGKSMDAAFFTTGSSGDAFGDELDDQIGAWHGGEDYGVSEEESAGGEGRDSKFGEKGYFGGPKWEE