AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29052

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29052.t1 MTR_3g073100 98.370 736 8 1 1 736 1 732 0.0 1499
MS.gene29052.t1 MTR_5g459450 74.008 731 154 6 15 735 28 732 0.0 1094
MS.gene29052.t1 MTR_3g097260 61.067 750 233 12 1 736 1 705 0.0 865
MS.gene29052.t1 MTR_8g095170 59.353 711 222 11 38 736 12 667 0.0 824
MS.gene29052.t1 MTR_8g095170 60.477 587 194 8 38 614 12 570 0.0 714
MS.gene29052.t1 MTR_8g039100 51.519 724 290 11 52 735 48 750 0.0 683
MS.gene29052.t1 MTR_1g050740 50.338 739 298 10 52 735 56 780 0.0 676
MS.gene29052.t1 MTR_3g014650 51.729 723 277 13 52 735 84 773 0.0 665
MS.gene29052.t1 MTR_1g062740 41.420 845 343 17 15 735 2 818 0.0 570
MS.gene29052.t1 MTR_8g088930 38.511 779 365 17 50 734 6 764 2.01e-173 516
MS.gene29052.t1 MTR_8g088930 38.590 780 364 18 50 734 6 765 6.93e-173 515
MS.gene29052.t1 MTR_7g089950 60.526 418 138 8 323 735 396 791 1.11e-166 500
MS.gene29052.t1 MTR_7g089950 54.229 201 88 2 51 251 65 261 1.19e-62 224
MS.gene29052.t1 MTR_8g088930 40.536 597 283 11 50 585 6 591 2.69e-145 441
MS.gene29052.t1 MTR_8g088930 40.536 597 283 11 50 585 6 591 3.61e-145 440
MS.gene29052.t1 MTR_3g005910 87.500 72 9 0 447 518 1 72 1.34e-37 134
MS.gene29052.t1 MTR_4g107460 36.444 225 125 5 44 263 40 251 3.65e-33 131
MS.gene29052.t1 MTR_4g107460 39.583 192 114 2 59 249 11 201 3.96e-32 128
MS.gene29052.t1 MTR_8g080860 32.411 253 124 3 44 250 7 258 3.70e-31 124
MS.gene29052.t1 MTR_8g080860 31.633 196 131 2 23 216 76 270 5.24e-25 106
MS.gene29052.t1 MTR_8g080860 35.971 139 88 1 56 194 134 271 2.89e-19 89.4
MS.gene29052.t1 MTR_8g080860 32.411 253 124 3 44 250 3 254 3.90e-31 124
MS.gene29052.t1 MTR_8g080860 31.633 196 131 2 23 216 72 266 5.32e-25 105
MS.gene29052.t1 MTR_8g080860 35.971 139 88 1 56 194 130 267 2.94e-19 89.4
MS.gene29052.t1 MTR_6g043150 39.106 179 108 1 50 228 3 180 3.61e-29 119
MS.gene29052.t1 MTR_6g043150 36.500 200 122 3 33 228 51 249 1.70e-26 111
MS.gene29052.t1 MTR_6g043150 37.791 172 106 1 57 228 148 318 1.79e-22 99.8
MS.gene29052.t1 MTR_6g043150 38.129 139 81 2 33 167 189 326 4.61e-15 77.4
MS.gene29052.t1 MTR_8g092090 34.737 190 123 1 60 249 43 231 3.13e-28 114
MS.gene29052.t1 MTR_8g092090 35.795 176 105 1 82 249 10 185 2.94e-23 100
MS.gene29052.t1 MTR_5g010840 33.088 272 155 7 55 308 110 372 3.19e-27 115
MS.gene29052.t1 MTR_5g010840 35.266 207 116 3 37 226 159 364 6.13e-25 108
MS.gene29052.t1 MTR_2g078470 34.842 221 139 3 34 250 52 271 4.95e-27 114
MS.gene29052.t1 MTR_2g078470 37.255 204 127 1 49 252 2 204 5.71e-26 110
MS.gene29052.t1 MTR_2g078470 35.176 199 124 2 34 228 121 318 5.69e-25 107
MS.gene29052.t1 MTR_2g078470 34.951 206 104 4 36 239 194 371 6.61e-24 104
MS.gene29052.t1 MTR_4g099180 36.416 173 109 1 58 230 173 344 8.70e-27 114
MS.gene29052.t1 MTR_4g099180 33.333 126 84 0 103 228 171 296 1.04e-14 77.4
MS.gene29052.t1 MTR_7g451440 36.416 173 109 1 58 230 193 364 5.59e-26 112
MS.gene29052.t1 MTR_7g451440 39.655 116 70 0 73 188 253 368 3.69e-20 94.7
MS.gene29052.t1 MTR_7g451440 34.314 102 67 0 149 250 191 292 2.84e-11 67.0
MS.gene29052.t1 MTR_8g080310 38.000 150 93 0 79 228 8 157 2.16e-25 103
MS.gene29052.t1 MTR_8g080340 39.437 142 84 2 53 194 16 155 3.92e-25 103
MS.gene29052.t1 MTR_8g080340 39.394 132 80 0 85 216 23 154 9.49e-24 99.0
MS.gene29052.t1 MTR_8g080340 38.333 120 74 0 131 250 23 142 3.55e-17 80.1
MS.gene29052.t1 MTR_8g080340 37.097 124 78 0 105 228 20 143 3.66e-17 80.1
MS.gene29052.t1 MTR_5g058920 38.150 173 106 1 58 230 198 369 2.65e-24 107
MS.gene29052.t1 MTR_5g058920 34.000 150 99 0 80 229 196 345 3.55e-17 85.1
MS.gene29052.t1 MTR_5g058920 38.938 113 69 0 73 185 258 370 1.54e-16 83.2
MS.gene29052.t1 MTR_5g058920 31.973 147 100 0 103 249 196 342 4.53e-13 72.4
MS.gene29052.t1 MTR_5g058920 35.878 131 84 0 127 257 197 327 5.95e-13 72.0
MS.gene29052.t1 MTR_8g007500 34.404 218 137 2 13 230 158 369 2.67e-24 107
MS.gene29052.t1 MTR_8g007500 37.931 116 72 0 73 188 258 373 7.06e-18 87.4
MS.gene29052.t1 MTR_3g072650 34.343 198 128 2 32 229 161 356 7.88e-24 105
MS.gene29052.t1 MTR_3g072650 35.398 113 73 0 73 185 246 358 7.74e-14 74.3
MS.gene29052.t1 MTR_3g072650 34.343 198 128 2 32 229 161 356 1.48e-23 104
MS.gene29052.t1 MTR_3g072650 35.398 113 73 0 73 185 246 358 1.17e-13 74.3
MS.gene29052.t1 MTR_8g080350 33.491 212 102 3 56 229 125 335 1.07e-22 101
MS.gene29052.t1 MTR_8g080350 27.941 204 142 3 29 228 72 274 1.03e-16 83.2
MS.gene29052.t1 MTR_8g080350 33.929 168 98 4 57 222 195 351 8.24e-16 80.5
MS.gene29052.t1 MTR_8g080350 32.867 143 94 1 108 250 86 226 1.08e-15 80.1
MS.gene29052.t1 MTR_8g095240 34.826 201 95 3 64 228 7 207 7.23e-21 96.3
MS.gene29052.t1 MTR_8g095240 28.780 205 136 2 56 250 118 322 4.78e-20 94.0
MS.gene29052.t1 MTR_8g095240 28.634 227 127 3 57 249 50 275 1.20e-17 86.7
MS.gene29052.t1 MTR_8g095240 33.121 157 104 1 73 228 167 323 6.27e-16 81.3
MS.gene29052.t1 MTR_8g095240 30.247 162 111 2 59 219 177 337 3.22e-13 72.8
MS.gene29052.t1 MTR_8g095240 30.216 139 97 0 57 195 198 336 3.83e-12 69.3
MS.gene29052.t1 MTR_3g005900 82.000 50 5 1 574 623 1 46 2.08e-20 85.9
MS.gene29052.t1 MTR_4g099180 34.821 112 73 0 103 214 171 282 5.12e-14 73.9
MS.gene29052.t1 MTR_4g099180 35.345 116 74 1 58 173 173 287 1.40e-13 72.8
MS.gene29052.t1 MTR_4g099180 34.454 119 78 0 73 191 164 282 6.73e-13 70.9
MS.gene29052.t1 MTR_4g099180 35.294 102 66 0 127 228 172 273 3.76e-11 65.5
MS.gene29052.t1 MTR_1g112280 35.200 125 79 2 86 209 618 741 5.98e-14 76.3
MS.gene29052.t1 MTR_1g112280 30.400 125 87 0 106 230 615 739 1.01e-11 68.9
MS.gene29052.t1 MTR_8g092410 31.655 139 88 4 90 222 140 277 8.77e-14 74.3
MS.gene29052.t1 MTR_8g092410 27.607 163 110 4 68 222 143 305 2.64e-12 69.7
MS.gene29052.t1 MTR_8g092410 32.192 146 81 6 113 250 140 275 5.84e-12 68.6
MS.gene29052.t1 MTR_4g099180 34.821 112 73 0 103 214 171 282 1.76e-13 72.8
MS.gene29052.t1 MTR_4g099180 36.283 113 71 1 58 170 173 284 3.28e-13 72.0
MS.gene29052.t1 MTR_4g099180 34.454 119 78 0 73 191 164 282 1.75e-12 69.7
MS.gene29052.t1 MTR_3g023310 32.000 125 72 2 73 197 11 122 9.93e-13 67.4
MS.gene29052.t1 MTR_3g023310 37.273 110 56 2 119 228 11 107 9.40e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29052.t1 AT1G77740 70.972 720 180 6 26 735 53 753 0.0 1043
MS.gene29052.t1 AT1G77740 70.972 720 180 6 26 735 53 753 0.0 1043
MS.gene29052.t1 AT1G21980 69.735 717 192 6 26 735 53 751 0.0 1019
MS.gene29052.t1 AT2G26420 55.082 728 270 15 32 736 26 719 0.0 764
MS.gene29052.t1 AT2G26420 55.082 728 270 15 32 736 26 719 0.0 764
MS.gene29052.t1 AT2G26420 54.608 727 261 14 32 736 26 705 0.0 757
MS.gene29052.t1 AT3G07960 53.576 713 282 13 52 735 22 714 0.0 725
MS.gene29052.t1 AT3G07960 34.579 107 70 0 144 250 21 127 2.78e-15 80.5
MS.gene29052.t1 AT3G56960 50.951 736 285 14 52 735 67 778 0.0 720
MS.gene29052.t1 AT3G56960 50.951 736 285 14 52 735 67 778 0.0 720
MS.gene29052.t1 AT2G41210 51.018 737 278 14 52 735 65 771 0.0 708
MS.gene29052.t1 AT3G07960 54.707 563 225 9 52 586 22 582 0.0 606
MS.gene29052.t1 AT3G07960 34.579 107 70 0 144 250 21 127 5.66e-15 79.3
MS.gene29052.t1 AT3G07960 54.707 563 225 9 52 586 22 582 0.0 606
MS.gene29052.t1 AT3G07960 34.579 107 70 0 144 250 21 127 6.68e-15 79.0
MS.gene29052.t1 AT3G07960 54.707 563 225 9 52 586 22 582 0.0 606
MS.gene29052.t1 AT3G07960 34.579 107 70 0 144 250 21 127 6.68e-15 79.0
MS.gene29052.t1 AT3G09920 40.691 811 350 19 29 735 29 812 0.0 559
MS.gene29052.t1 AT3G09920 40.691 811 350 19 29 735 29 812 0.0 559
MS.gene29052.t1 AT3G09920 40.691 811 350 19 29 735 29 812 0.0 559
MS.gene29052.t1 AT3G09920 40.691 811 350 19 29 735 29 812 0.0 559
MS.gene29052.t1 AT1G10900 40.779 770 354 14 50 736 4 754 0.0 543
MS.gene29052.t1 AT1G10900 40.779 770 354 14 50 736 4 754 0.0 543
MS.gene29052.t1 AT1G10900 40.779 770 354 14 50 736 4 754 0.0 543
MS.gene29052.t1 AT1G60890 38.938 791 350 19 50 734 4 767 1.17e-173 517
MS.gene29052.t1 AT1G60890 38.910 789 349 19 52 734 18 779 1.51e-172 514
MS.gene29052.t1 AT1G01460 38.263 426 210 10 357 735 3 422 1.68e-78 258
MS.gene29052.t1 AT4G01190 36.683 398 194 6 374 732 12 390 6.30e-74 245
MS.gene29052.t1 AT4G01190 36.683 398 194 6 374 732 22 400 1.11e-73 245
MS.gene29052.t1 AT4G01190 36.683 398 194 6 374 732 22 400 1.11e-73 245
MS.gene29052.t1 AT2G35170 33.668 199 126 2 60 258 229 421 2.01e-26 114
MS.gene29052.t1 AT4G17080 35.028 177 114 1 58 234 258 433 2.73e-25 110
MS.gene29052.t1 AT4G17080 34.899 149 95 1 80 228 235 381 3.28e-17 85.9
MS.gene29052.t1 AT1G77660 35.429 175 112 1 56 230 177 350 3.98e-23 103
MS.gene29052.t1 AT1G77660 34.932 146 93 1 108 253 161 304 2.82e-12 69.7
MS.gene29052.t1 AT1G21920 35.260 173 111 1 58 230 175 346 8.82e-23 101
MS.gene29052.t1 AT1G21920 38.261 115 71 0 73 187 235 349 1.29e-15 79.7
MS.gene29052.t1 AT1G21920 29.240 171 98 1 103 250 173 343 8.97e-13 70.9
MS.gene29052.t1 AT1G21920 35.849 106 68 0 145 250 169 274 7.51e-12 68.2
MS.gene29052.t1 AT1G21920 35.260 173 111 1 58 230 175 346 1.13e-22 101
MS.gene29052.t1 AT1G21920 36.434 129 81 1 59 187 222 349 1.53e-15 80.1
MS.gene29052.t1 AT1G21920 29.240 171 98 1 103 250 173 343 8.83e-13 71.6
MS.gene29052.t1 AT1G21920 35.849 106 68 0 145 250 169 274 8.37e-12 68.6
MS.gene29052.t1 AT1G34260 32.161 199 111 7 401 582 1192 1383 1.36e-14 78.6
MS.gene29052.t1 AT1G34260 32.161 199 111 7 401 582 1192 1383 1.36e-14 78.6
MS.gene29052.t1 AT1G34260 32.161 199 111 7 401 582 1192 1383 1.36e-14 78.6
MS.gene29052.t1 AT1G34260 32.161 199 111 7 401 582 952 1143 1.60e-14 78.2
MS.gene29052.t1 AT1G75010 33.594 128 83 2 83 209 604 730 6.43e-14 75.9
MS.gene29052.t1 AT1G75010 28.000 125 90 0 106 230 604 728 5.83e-11 66.6

Find 186 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATGTTGTTCTATATTT+TGG 0.034831 3.4:+72017775 MS.gene29052:CDS
GTTGAAGGTGGAAAGGATTT+TGG 0.125060 3.4:+72014944 MS.gene29052:CDS
CGAGTTTAAGTTAGGTAAAA+TGG 0.171327 3.4:+72014493 MS.gene29052:CDS
GCCATGCGCTCTGCTCTTGC+TGG 0.224688 3.4:-72017679 None:intergenic
TTAATCTTCAATTGGGTATA+AGG 0.226807 3.4:+72015179 MS.gene29052:CDS
TCGAAACTGCTTAATCTCTT+TGG 0.256358 3.4:-72015074 None:intergenic
TCACTTGTGACAAAATTCTA+TGG 0.265062 3.4:+72016249 MS.gene29052:CDS
ACAATTGAGGAAGCGATTTC+AGG 0.271948 3.4:+72015667 MS.gene29052:CDS
TTGATTTGAAGGAGAAGTTT+TGG 0.277331 3.4:+72015365 MS.gene29052:CDS
CTTTGAACCAATTTCTTTGC+AGG 0.287736 3.4:-72016558 None:intergenic
TGTTTCGCCTGCAAAGAAAT+TGG 0.293239 3.4:+72016551 MS.gene29052:CDS
GGAAAATTCTCGTGGCCTTC+AGG 0.294946 3.4:+72014455 MS.gene29052:CDS
AAGCAGTTTCGACGGAATTC+TGG 0.296681 3.4:+72015085 MS.gene29052:CDS
TTTGGAAGCTGAAGGAATTA+TGG 0.301969 3.4:+72016709 MS.gene29052:CDS
TGATAATACTTGTGACAAAA+TGG 0.310651 3.4:+72016766 MS.gene29052:CDS
AATTATGGATTACAGTCTTT+TGG 0.313536 3.4:+72016724 MS.gene29052:CDS
CGAAACTGCTTAATCTCTTT+GGG 0.329372 3.4:-72015073 None:intergenic
TCTTATGCTTAATCTTCAAT+TGG 0.334042 3.4:+72015171 MS.gene29052:CDS
GTTTCAGGAAATCATTGATT+AGG 0.336752 3.4:+72017641 MS.gene29052:intron
CCTTCAAGTCAAATCGTCTA+TGG 0.339301 3.4:-72016444 None:intergenic
TGGGAATCTGATGGTGAAAA+AGG 0.345497 3.4:+72014980 MS.gene29052:CDS
TCCGTTTGGTGTGTTGTTGC+CGG 0.352531 3.4:-72014360 None:intergenic
CGAGGAAAAGCTTCCGGAAA+TGG 0.359329 3.4:+72014434 MS.gene29052:CDS
GGAACGCTTGTTTGGTTGAA+TGG 0.360362 3.4:+72014731 MS.gene29052:CDS
CGAACATGTTTCTCAATATG+AGG 0.363324 3.4:+72016224 MS.gene29052:CDS
GTAAACACACCTTGCCCTTT+CGG 0.365516 3.4:-72014788 None:intergenic
CAATGCGACAAGGAGTAAAA+TGG 0.367842 3.4:-72017744 None:intergenic
TTCAATCTTCTTTATTGAAT+GGG 0.369480 3.4:+72014870 MS.gene29052:CDS
TTTCAATCTTCTTTATTGAA+TGG 0.371669 3.4:+72014869 MS.gene29052:CDS
ATAATGTATCGGTGTTGAAT+AGG 0.380784 3.4:+72015026 MS.gene29052:CDS
GAGATATTTACAGTGGTTCA+TGG 0.381217 3.4:+72014546 MS.gene29052:CDS
GAAGTTGCTATGTTGGGAAT+TGG 0.382649 3.4:+72014822 MS.gene29052:CDS
TCTTACATGGGAACCTTCTC+CGG 0.385552 3.4:+72014341 MS.gene29052:CDS
TGTCTTGTAGCTCTGCTTCA+AGG 0.388811 3.4:-72016958 None:intergenic
ACGGAAGAGGAACGCTTGTT+TGG 0.389884 3.4:+72014723 MS.gene29052:CDS
AAGAATGTTCAAGAAGGAAA+AGG 0.390966 3.4:+72014641 MS.gene29052:CDS
CTCAGGGAGCTTTCATCTCC+TGG 0.397244 3.4:+72015734 MS.gene29052:CDS
TAATCATAAATCTGTCATCT+TGG 0.401726 3.4:-72015784 None:intergenic
AACCTCTTCGAGTAAAGCTT+TGG 0.403371 3.4:-72017895 None:intergenic
TACGAAGGCGAGTTTAAGTT+AGG 0.409763 3.4:+72014485 MS.gene29052:CDS
AATTCGATTGTTATGCTTGT+TGG 0.414110 3.4:-72014272 None:intergenic
AAGGGCAAGGTGTGTTTACT+TGG 0.414183 3.4:+72014792 MS.gene29052:CDS
GTACGGCCGGTGGTAGCAAC+CGG 0.415701 3.4:-72014218 None:intergenic
TGCTGAAGTGTGACCGGGTA+CGG 0.416039 3.4:-72014235 None:intergenic
GATTACATGTTAGCTATTTG+TGG 0.418084 3.4:+72015701 MS.gene29052:CDS
GATTGCCCATCACGATGAAC+CGG 0.420765 3.4:-72016399 None:intergenic
TTAGGTAAAATGGAAGGTTC+TGG 0.422048 3.4:+72014503 MS.gene29052:CDS
AGGAAATCATTGATTAGGTT+AGG 0.422069 3.4:+72017646 MS.gene29052:intron
TATGAAGGTGAATGGGAAAA+TGG 0.423372 3.4:+72014761 MS.gene29052:CDS
AAGGAAAAGGGAGGTATGTA+TGG 0.424998 3.4:+72014654 MS.gene29052:CDS
TGCTTCCGAGGTTAAGAGAC+CGG 0.436988 3.4:+72015114 MS.gene29052:CDS
TGGAAACGAGGAAAAGCTTC+CGG 0.437406 3.4:+72014428 MS.gene29052:CDS
CATACCTTCTGGCCTCCAAT+TGG 0.438269 3.4:-72016288 None:intergenic
TTGACCAATACACCAGTCTT+GGG 0.443312 3.4:+72017716 MS.gene29052:CDS
ATTGAGATCGAGGTCTTTGA+GGG 0.447025 3.4:-72016524 None:intergenic
ACCGGGTGAAACTATATGTA+AGG 0.448524 3.4:+72015132 MS.gene29052:CDS
ACGGAGATTATTATGAAGGT+TGG 0.448575 3.4:+72014612 MS.gene29052:CDS
CTTATGCTTAATCTTCAATT+GGG 0.449000 3.4:+72015172 MS.gene29052:CDS
TCCGGCTGCTGAAGTGTGAC+CGG 0.449099 3.4:-72014241 None:intergenic
TTTGACCAATACACCAGTCT+TGG 0.451828 3.4:+72017715 MS.gene29052:CDS
AATTGAGATCGAGGTCTTTG+AGG 0.452408 3.4:-72016525 None:intergenic
AGAATGTTCAAGAAGGAAAA+GGG 0.454701 3.4:+72014642 MS.gene29052:CDS
AATCATAAATCTGTCATCTT+GGG 0.459242 3.4:-72015783 None:intergenic
CACTTGTGACAAAATTCTAT+GGG 0.459389 3.4:+72016250 MS.gene29052:CDS
GTACATTGTGTCAAACCAAT+TGG 0.461773 3.4:+72016273 MS.gene29052:CDS
TGGACTAGGTTTCCTTCTGA+AGG 0.464564 3.4:+72015385 MS.gene29052:CDS
TCATCCCAAGACTGGTGTAT+TGG 0.465016 3.4:-72017720 None:intergenic
CTAACTTATAGATACTTCTT+CGG 0.467998 3.4:+72016184 MS.gene29052:intron
ACCCAACGGTGATTCTTACA+TGG 0.468531 3.4:+72014328 MS.gene29052:CDS
GGAATCGTTATGAAGGTGAA+TGG 0.469561 3.4:+72014753 MS.gene29052:CDS
GGTAACGGAGATTATTATGA+AGG 0.472824 3.4:+72014608 MS.gene29052:CDS
TGGTGTGTTGTTGCCGGAGA+AGG 0.473091 3.4:-72014354 None:intergenic
TGGAAGAACGGTGTTATTAA+CGG 0.473795 3.4:+72014704 MS.gene29052:CDS
AAGAGGTTTCGTGATTTCGT+GGG 0.476391 3.4:+72017910 MS.gene29052:CDS
GAACGCTTGTTTGGTTGAAT+GGG 0.476408 3.4:+72014732 MS.gene29052:CDS
AACAACACACCAAACGGATC+AGG 0.483095 3.4:+72014365 MS.gene29052:CDS
CCATAGACGATTTGACTTGA+AGG 0.483414 3.4:+72016444 MS.gene29052:CDS
TTTGTGGAAATGCTGCCCTC+AGG 0.484497 3.4:+72015717 MS.gene29052:CDS
AAAATATAGAACAACATCAT+AGG 0.485216 3.4:-72017773 None:intergenic
GACAGGGATAGAGTCAAATC+TGG 0.491174 3.4:+72016977 MS.gene29052:CDS
CAAGAGCAGAGCGCATGGCT+CGG 0.492297 3.4:+72017683 MS.gene29052:CDS
GAGATTATTATGAAGGTTGG+TGG 0.493359 3.4:+72014615 MS.gene29052:CDS
GTTGTATCTACGAAGGTGAA+TGG 0.494101 3.4:+72014408 MS.gene29052:CDS
CTTTCATCTCCTGGCAAAAG+TGG 0.494331 3.4:+72015743 MS.gene29052:CDS
TCCGGCAACAACACACCAAA+CGG 0.494538 3.4:+72014359 MS.gene29052:CDS
GTATCGGTGTTGAATAGGAT+TGG 0.499415 3.4:+72015031 MS.gene29052:CDS
CGAGTAAAGCTTTGGATCAA+CGG 0.499572 3.4:-72017887 None:intergenic
ACGGATCAGGAAAATACAAA+TGG 0.500009 3.4:+72014378 MS.gene29052:CDS
CCGGCTGCTGAAGTGTGACC+GGG 0.500586 3.4:-72014240 None:intergenic
TTGGAAGGATTACTGCCCTA+TGG 0.500847 3.4:+72015447 MS.gene29052:CDS
ATCCAAAGCTTTACTCGAAG+AGG 0.501514 3.4:+72017893 MS.gene29052:CDS
TTACGACATCAGCAAGAAGC+TGG 0.503669 3.4:+72017819 MS.gene29052:CDS
TTGCTACCACCGGCCGTACC+CGG 0.507386 3.4:+72014222 MS.gene29052:CDS
CGGCTGTGAGTCTGAGGAGG+AGG 0.510524 3.4:-72014195 None:intergenic
ATCAATCGATGGAGTTCCGT+TGG 0.514044 3.4:+72015428 MS.gene29052:CDS
CCAACATAGCAACTTCCATC+AGG 0.514644 3.4:-72014815 None:intergenic
CAGCCGCCGGTTGCTACCAC+CGG 0.517037 3.4:+72014212 MS.gene29052:CDS
AAGTCAAATCGTCTATGGAT+TGG 0.518884 3.4:-72016439 None:intergenic
AACGGTGTTATTAACGGAAG+AGG 0.520673 3.4:+72014710 MS.gene29052:CDS
CTCCTCAGACTCACAGCCGC+CGG 0.521201 3.4:+72014199 MS.gene29052:CDS
TCAACGGCTGAGATTGATGA+AGG 0.521839 3.4:-72017871 None:intergenic
CTGATGGAAGTTGCTATGTT+GGG 0.522196 3.4:+72014816 MS.gene29052:CDS
GGAATGAGTATATTGGTGAA+TGG 0.523321 3.4:+72014684 MS.gene29052:CDS
CCCGGTCACACTTCAGCAGC+CGG 0.523983 3.4:+72014240 MS.gene29052:CDS
GGAAAGAAACGTTACGGTAA+CGG 0.525703 3.4:+72014593 MS.gene29052:CDS
GATAATACTTGTGACAAAAT+GGG 0.528057 3.4:+72016767 MS.gene29052:CDS
ATCGATGGAGTTCCGTTGGA+AGG 0.528474 3.4:+72015432 MS.gene29052:CDS
CCTGATGGAAGTTGCTATGT+TGG 0.529482 3.4:+72014815 MS.gene29052:CDS
GAAGAGGTTTCGTGATTTCG+TGG 0.532343 3.4:+72017909 MS.gene29052:CDS
TTGAAGCAGAGCTACAAGAC+AGG 0.533588 3.4:+72016960 MS.gene29052:CDS
CTGAGGAGGAGGTGTTGTTG+TGG 0.534300 3.4:-72014184 None:intergenic
TTGTGGAAATGCTGCCCTCA+GGG 0.535698 3.4:+72015718 MS.gene29052:CDS
CCCAACGGTGATTCTTACAT+GGG 0.537955 3.4:+72014329 MS.gene29052:CDS
GAATCGTTATGAAGGTGAAT+GGG 0.538035 3.4:+72014754 MS.gene29052:CDS
CATAGACGATTTGACTTGAA+GGG 0.539532 3.4:+72016445 MS.gene29052:CDS
GGTGTGTTTACTTGGCCTGA+TGG 0.542730 3.4:+72014800 MS.gene29052:CDS
GGGAAAATGGTGTTCCGAAA+GGG 0.544352 3.4:+72014774 MS.gene29052:CDS
ATAGCTAACATGTAATCAGC+AGG 0.548324 3.4:-72015695 None:intergenic
TGTATCTGTAGGCACTCTGT+TGG 0.550873 3.4:+72015301 MS.gene29052:intron
CCCTTACATATAGTTTCACC+CGG 0.553878 3.4:-72015133 None:intergenic
ACAGACCCGGTTCATCGTGA+TGG 0.557962 3.4:+72016393 MS.gene29052:intron
CTTCAGTCTTATCTGTCATA+CGG 0.558023 3.4:-72016480 None:intergenic
CTGTAGGCACTCTGTTGGAA+AGG 0.559975 3.4:+72015306 MS.gene29052:intron
CCCATGTAAGAATCACCGTT+GGG 0.561567 3.4:-72014329 None:intergenic
AAAATGGCTCATCCCAAGAC+TGG 0.564949 3.4:-72017728 None:intergenic
AACCGGCGGCTGTGAGTCTG+AGG 0.565877 3.4:-72014201 None:intergenic
GCCAGCAAGAGCAGAGCGCA+TGG 0.570278 3.4:+72017678 MS.gene29052:CDS
TTTAAGTTAGGTAAAATGGA+AGG 0.570615 3.4:+72014497 MS.gene29052:CDS
TTGCTGTGACAATGAGGAAG+AGG 0.570749 3.4:+72014915 MS.gene29052:CDS
GACTTGAAGGGATCGTCACA+TGG 0.570790 3.4:+72016457 MS.gene29052:CDS
CAGACCCGGTTCATCGTGAT+GGG 0.574346 3.4:+72016394 MS.gene29052:intron
GTGTGACCGGGTACGGCCGG+TGG 0.576629 3.4:-72014228 None:intergenic
TGGGAAAATGGTGTTCCGAA+AGG 0.578671 3.4:+72014773 MS.gene29052:CDS
AACTCCATCGATTGATGTGG+TGG 0.582178 3.4:-72015421 None:intergenic
ATTTGTATTTGGGAATCTGA+TGG 0.583123 3.4:+72014971 MS.gene29052:CDS
TCCCATGTAAGAATCACCGT+TGG 0.585589 3.4:-72014330 None:intergenic
TGATATTGTTGATAATGTAT+CGG 0.585855 3.4:+72015015 MS.gene29052:CDS
GGAGAATATTCAGCGAGGAC+CGG 0.588709 3.4:+72017932 MS.gene29052:CDS
ATTGAGGAAGCGATTTCAGG+TGG 0.589268 3.4:+72015670 MS.gene29052:CDS
TTCACCCGGTCTCTTAACCT+CGG 0.590828 3.4:-72015119 None:intergenic
GAGCAGAGCGCATGGCTCGG+AGG 0.591132 3.4:+72017686 MS.gene29052:CDS
TTGAATGGGAATCGTTATGA+AGG 0.597420 3.4:+72014746 MS.gene29052:CDS
AATGGTGTTCCGAAAGGGCA+AGG 0.597645 3.4:+72014779 MS.gene29052:CDS
GAAGTGTGACCGGGTACGGC+CGG 0.598746 3.4:-72014231 None:intergenic
GCTTCCGAGGTTAAGAGACC+GGG 0.600548 3.4:+72015115 MS.gene29052:CDS
ATTGTCCAGACAAATTGAGA+GGG 0.600968 3.4:+72016676 MS.gene29052:intron
TCCTTCAAATCAAAATCACT+CGG 0.601151 3.4:-72015355 None:intergenic
TGGAAGAAGAATGTTCAAGA+AGG 0.601723 3.4:+72014635 MS.gene29052:CDS
CAAACCAATTGGAGGCCAGA+AGG 0.602903 3.4:+72016284 MS.gene29052:CDS
GCATGCATACAAGTCACTGC+AGG 0.604105 3.4:+72017843 MS.gene29052:CDS
GTAATCTTAGATCCTTCAGA+AGG 0.607853 3.4:-72015397 None:intergenic
CCGGGTGAAACTATATGTAA+GGG 0.608012 3.4:+72015133 MS.gene29052:CDS
AATTGTCCAGACAAATTGAG+AGG 0.609484 3.4:+72016675 MS.gene29052:intron
ATTGCCCATCACGATGAACC+GGG 0.610262 3.4:-72016398 None:intergenic
GGGATAGAGTCAAATCTGGC+CGG 0.612890 3.4:+72016981 MS.gene29052:CDS
CCTTCAGGTTCTATTTACGA+AGG 0.614367 3.4:+72014470 MS.gene29052:CDS
GGAAAATACAAATGGAACGA+TGG 0.614574 3.4:+72014386 MS.gene29052:CDS
CGGCGGCTGTGAGTCTGAGG+AGG 0.616103 3.4:-72014198 None:intergenic
CATTGTGTCAAACCAATTGG+AGG 0.621598 3.4:+72016276 MS.gene29052:CDS
CAGAGTGAAAAGTTTATGCG+TGG 0.622075 3.4:+72016926 MS.gene29052:CDS
GTCACAGCAAAATCATCACC+AGG 0.624630 3.4:-72014902 None:intergenic
AGGAGATGAAAGCTCCCTGA+GGG 0.626112 3.4:-72015732 None:intergenic
CGGCCGGTGGTAGCAACCGG+CGG 0.627489 3.4:-72014215 None:intergenic
CCTTCGTAAATAGAACCTGA+AGG 0.628853 3.4:-72014470 None:intergenic
TATATTGGTGAATGGAAGAA+CGG 0.630785 3.4:+72014692 MS.gene29052:CDS
TACGCCACCACATCAATCGA+TGG 0.633033 3.4:+72015417 MS.gene29052:CDS
AAGAGATTAAGCAGTTTCGA+CGG 0.635005 3.4:+72015077 MS.gene29052:CDS
CGGAACTCCATCGATTGATG+TGG 0.636137 3.4:-72015424 None:intergenic
GAAACACAAAATTGAGATCG+AGG 0.636698 3.4:-72016534 None:intergenic
GAGATCGAGGTCTTTGAGGG+TGG 0.639500 3.4:-72016521 None:intergenic
CGGGTGAAACTATATGTAAG+GGG 0.642189 3.4:+72015134 MS.gene29052:CDS
CCGGAAATGGAAAATTCTCG+TGG 0.642730 3.4:+72014447 MS.gene29052:CDS
AGAGGTTTCGTGATTTCGTG+GGG 0.645463 3.4:+72017911 MS.gene29052:CDS
TGAAGCAGAGCTACAAGACA+GGG 0.650372 3.4:+72016961 MS.gene29052:CDS
ATGTTCAAGAAGGAAAAGGG+AGG 0.651936 3.4:+72014645 MS.gene29052:CDS
ACCACTGTAAATATCTCCGT+CGG 0.657482 3.4:-72014540 None:intergenic
GGTTACGGAAAGAAACGTTA+CGG 0.659807 3.4:+72014587 MS.gene29052:CDS
TAGGTCTCCCCAATGCGACA+AGG 0.659959 3.4:-72017754 None:intergenic
TAGGGCAGTAATCCTTCCAA+CGG 0.670381 3.4:-72015444 None:intergenic
AACGATGGTTGTATCTACGA+AGG 0.690640 3.4:+72014401 MS.gene29052:CDS
CAACGGCTGAGATTGATGAA+GGG 0.697768 3.4:-72017870 None:intergenic
ACTTGTGACAAAATTCTATG+GGG 0.699706 3.4:+72016251 MS.gene29052:CDS
CAGGAGATGAAAGCTCCCTG+AGG 0.700563 3.4:-72015733 None:intergenic
TCCGACGGAGATATTTACAG+TGG 0.708834 3.4:+72014539 MS.gene29052:CDS
TACGAAGGTGAATGGAAACG+AGG 0.723760 3.4:+72014416 MS.gene29052:CDS
CGTGGGGAGAATATTCAGCG+AGG 0.748269 3.4:+72017927 MS.gene29052:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTATTGCTATTTTAA+GGG + chr3.4:72016323-72016342 MS.gene29052:intron 10.0%
!!! TTTAAGTTGATAAAATAATT+AGG + chr3.4:72017033-72017052 MS.gene29052:intron 10.0%
!! ACATAAAAATATGAATGATT+AGG - chr3.4:72017302-72017321 None:intergenic 15.0%
!!! ATTATATTGTTTATCCTTTT+AGG + chr3.4:72016887-72016906 MS.gene29052:intron 15.0%
!!! ATTCTATAAAATGTTGATTT+AGG - chr3.4:72017116-72017135 None:intergenic 15.0%
!!! CAACATTTTATAGAATAATT+AGG + chr3.4:72017120-72017139 MS.gene29052:intron 15.0%
!!! GATAAATTATTGCTATTTTA+AGG + chr3.4:72016322-72016341 MS.gene29052:intron 15.0%
!!! TTCTATAAAATGTTGATTTA+GGG - chr3.4:72017115-72017134 None:intergenic 15.0%
!! AAAATATAGAACAACATCAT+AGG - chr3.4:72017776-72017795 None:intergenic 20.0%
!! AAACAAGCAATCAATTAATT+AGG - chr3.4:72017436-72017455 None:intergenic 20.0%
!! ATAGTGCAAATATTCTAAAT+AGG + chr3.4:72016100-72016119 MS.gene29052:intron 20.0%
!! CAATAATTTATCTTCAACAA+AGG - chr3.4:72016314-72016333 None:intergenic 20.0%
!! TTCAATCTTCTTTATTGAAT+GGG + chr3.4:72014870-72014889 MS.gene29052:CDS 20.0%
!! TTTCAATCTTCTTTATTGAA+TGG + chr3.4:72014869-72014888 MS.gene29052:CDS 20.0%
!!! ATACCATCTCTATATTTTAT+TGG + chr3.4:72017473-72017492 MS.gene29052:intron 20.0%
!!! ATGATGTTGTTCTATATTTT+GGG + chr3.4:72017776-72017795 MS.gene29052:CDS 20.0%
!!! TATGATGTTGTTCTATATTT+TGG + chr3.4:72017775-72017794 MS.gene29052:CDS 20.0%
!!! TGATATTGTTGATAATGTAT+CGG + chr3.4:72015015-72015034 MS.gene29052:CDS 20.0%
!!! TTAAGTTTAAAATTGTGCAT+TGG - chr3.4:72015938-72015957 None:intergenic 20.0%
! AATCATAAATCTGTCATCTT+GGG - chr3.4:72015786-72015805 None:intergenic 25.0%
! AATGATTAACATTAACTACC+AGG - chr3.4:72015501-72015520 None:intergenic 25.0%
! ATTAATTGATTGCTTGTTTC+TGG + chr3.4:72017437-72017456 MS.gene29052:intron 25.0%
! CAGCATTTATAAAGTAGTTA+TGG + chr3.4:72017519-72017538 MS.gene29052:intron 25.0%
! CTAAATAGGTCAAGTAATAT+GGG + chr3.4:72016114-72016133 MS.gene29052:intron 25.0%
! CTAACTTATAGATACTTCTT+CGG + chr3.4:72016184-72016203 MS.gene29052:intron 25.0%
! CTTATGCTTAATCTTCAATT+GGG + chr3.4:72015172-72015191 MS.gene29052:CDS 25.0%
! CTTTATAAATGCTGAAGTAT+AGG - chr3.4:72017513-72017532 None:intergenic 25.0%
! GATAATACTTGTGACAAAAT+GGG + chr3.4:72016767-72016786 MS.gene29052:CDS 25.0%
! TAATCATAAATCTGTCATCT+TGG - chr3.4:72015787-72015806 None:intergenic 25.0%
! TATAAAGTAGTTATGGTTGT+TGG + chr3.4:72017526-72017545 MS.gene29052:intron 25.0%
! TCTAAATAGGTCAAGTAATA+TGG + chr3.4:72016113-72016132 MS.gene29052:intron 25.0%
! TCTTATGCTTAATCTTCAAT+TGG + chr3.4:72015171-72015190 MS.gene29052:CDS 25.0%
! TGATAATACTTGTGACAAAA+TGG + chr3.4:72016766-72016785 MS.gene29052:CDS 25.0%
! TTAATCTTCAATTGGGTATA+AGG + chr3.4:72015179-72015198 MS.gene29052:CDS 25.0%
! TTATTCTCCTTGTGTTAATT+AGG - chr3.4:72015626-72015645 None:intergenic 25.0%
! TTGAATTATCTTTAGCAAGT+AGG + chr3.4:72017354-72017373 MS.gene29052:intron 25.0%
! TTGCCAATAAAATATAGAGA+TGG - chr3.4:72017479-72017498 None:intergenic 25.0%
!! TTTAAGTTAGGTAAAATGGA+AGG + chr3.4:72014497-72014516 MS.gene29052:CDS 25.0%
!! TTTGTAATTTGTAGTAGTTC+TGG + chr3.4:72015257-72015276 MS.gene29052:intron 25.0%
!! TTTTATGTTGACGACATTAA+TGG + chr3.4:72017314-72017333 MS.gene29052:intron 25.0%
!! TTTTGAATTTCAGACAATTG+AGG + chr3.4:72015654-72015673 MS.gene29052:intron 25.0%
!!! AATTATGGATTACAGTCTTT+TGG + chr3.4:72016724-72016743 MS.gene29052:CDS 25.0%
!!! ATTTTGGGAAGATTTGTATT+TGG + chr3.4:72014960-72014979 MS.gene29052:CDS 25.0%
!!! TAAATTTTGACGTGTTAAGT+AGG + chr3.4:72017609-72017628 MS.gene29052:intron 25.0%
!!! TTTTGGGAAGATTTGTATTT+GGG + chr3.4:72014961-72014980 MS.gene29052:CDS 25.0%
AAAAACGGGAATGAGTATAT+TGG + chr3.4:72014677-72014696 MS.gene29052:CDS 30.0%
AAGAATGTTCAAGAAGGAAA+AGG + chr3.4:72014641-72014660 MS.gene29052:CDS 30.0%
AATTATCTTTAGCAAGTAGG+TGG + chr3.4:72017357-72017376 MS.gene29052:intron 30.0%
AATTCGATTGTTATGCTTGT+TGG - chr3.4:72014275-72014294 None:intergenic 30.0%
ACACAAGGAGAATAATGTTA+TGG + chr3.4:72015631-72015650 MS.gene29052:intron 30.0%
ACTTGTGACAAAATTCTATG+GGG + chr3.4:72016251-72016270 MS.gene29052:CDS 30.0%
AGAATGTTCAAGAAGGAAAA+GGG + chr3.4:72014642-72014661 MS.gene29052:CDS 30.0%
AGTTTCGTTCTTTACATTTC+TGG + chr3.4:72015596-72015615 MS.gene29052:intron 30.0%
ATTATCTTTAGCAAGTAGGT+GGG + chr3.4:72017358-72017377 MS.gene29052:intron 30.0%
ATTTGTATTTGGGAATCTGA+TGG + chr3.4:72014971-72014990 MS.gene29052:CDS 30.0%
CACTTGTGACAAAATTCTAT+GGG + chr3.4:72016250-72016269 MS.gene29052:CDS 30.0%
CAGAACATATTTCAACTTAC+CGG - chr3.4:72017003-72017022 None:intergenic 30.0%
GATTACATGTTAGCTATTTG+TGG + chr3.4:72015701-72015720 MS.gene29052:CDS 30.0%
TATATTGGTGAATGGAAGAA+CGG + chr3.4:72014692-72014711 MS.gene29052:CDS 30.0%
TCAACTAGGTCAAGTAATAT+GGG - chr3.4:72015901-72015920 None:intergenic 30.0%
TCACTTGTGACAAAATTCTA+TGG + chr3.4:72016249-72016268 MS.gene29052:CDS 30.0%
TCCTTCAAATCAAAATCACT+CGG - chr3.4:72015358-72015377 None:intergenic 30.0%
TTGTCTGGACAATTATATCA+AGG - chr3.4:72016669-72016688 None:intergenic 30.0%
! AGGAAATCATTGATTAGGTT+AGG + chr3.4:72017646-72017665 MS.gene29052:intron 30.0%
! CGAGTTTAAGTTAGGTAAAA+TGG + chr3.4:72014493-72014512 MS.gene29052:CDS 30.0%
! GTTTCAGGAAATCATTGATT+AGG + chr3.4:72017641-72017660 MS.gene29052:intron 30.0%
! TGTTATTTAAAACACAGACC+CGG + chr3.4:72016380-72016399 MS.gene29052:intron 30.0%
!! AGTAGGATTTTTCTTGTTTC+AGG + chr3.4:72017626-72017645 MS.gene29052:intron 30.0%
!! ATAATGTATCGGTGTTGAAT+AGG + chr3.4:72015026-72015045 MS.gene29052:CDS 30.0%
!! TTGATTTGAAGGAGAAGTTT+TGG + chr3.4:72015365-72015384 MS.gene29052:CDS 30.0%
!!! TTTTTGGTTTGTGTATCTGT+AGG + chr3.4:72015290-72015309 MS.gene29052:intron 30.0%
AAGAGATTAAGCAGTTTCGA+CGG + chr3.4:72015077-72015096 MS.gene29052:CDS 35.0%
AAGAGTCATGCTTTCCTAAA+AGG - chr3.4:72016904-72016923 None:intergenic 35.0%
AAGTCAAATCGTCTATGGAT+TGG - chr3.4:72016442-72016461 None:intergenic 35.0%
AATTGTCCAGACAAATTGAG+AGG + chr3.4:72016675-72016694 MS.gene29052:intron 35.0%
ACCACATCCATAGTTTAAGT+GGG + chr3.4:72017073-72017092 MS.gene29052:intron 35.0%
ACGGAGATTATTATGAAGGT+TGG + chr3.4:72014612-72014631 MS.gene29052:CDS 35.0%
ACGGATCAGGAAAATACAAA+TGG + chr3.4:72014378-72014397 MS.gene29052:CDS 35.0%
AGGCTATACCTAAAAACCAT+AGG - chr3.4:72015466-72015485 None:intergenic 35.0%
AGTGAAAAAATCCGAAGTCA+AGG + chr3.4:72015811-72015830 MS.gene29052:CDS 35.0%
ATAAAGGAGTGAGATGTTGT+AGG + chr3.4:72017224-72017243 MS.gene29052:intron 35.0%
ATAGCTAACATGTAATCAGC+AGG - chr3.4:72015698-72015717 None:intergenic 35.0%
ATAGGTCAAGTAATATGGGA+CGG + chr3.4:72016118-72016137 MS.gene29052:intron 35.0%
ATTGTCCAGACAAATTGAGA+GGG + chr3.4:72016676-72016695 MS.gene29052:intron 35.0%
CATTTCTTTAGCACTCACAT+AGG + chr3.4:72015517-72015536 MS.gene29052:intron 35.0%
CCAAAAACAAACCTTGACTT+CGG - chr3.4:72015825-72015844 None:intergenic 35.0%
CGAAACTGCTTAATCTCTTT+GGG - chr3.4:72015076-72015095 None:intergenic 35.0%
CGAACATGTTTCTCAATATG+AGG + chr3.4:72016224-72016243 MS.gene29052:CDS 35.0%
CTACCAGGTGAAAAACAAAA+AGG - chr3.4:72015486-72015505 None:intergenic 35.0%
CTTTGAACCAATTTCTTTGC+AGG - chr3.4:72016561-72016580 None:intergenic 35.0%
GAAACACAAAATTGAGATCG+AGG - chr3.4:72016537-72016556 None:intergenic 35.0%
GAATCGTTATGAAGGTGAAT+GGG + chr3.4:72014754-72014773 MS.gene29052:CDS 35.0%
GAGATATTTACAGTGGTTCA+TGG + chr3.4:72014546-72014565 MS.gene29052:CDS 35.0%
GAGATTATTATGAAGGTTGG+TGG + chr3.4:72014615-72014634 MS.gene29052:CDS 35.0%
GGAAAATACAAATGGAACGA+TGG + chr3.4:72014386-72014405 MS.gene29052:CDS 35.0%
GGAATGAGTATATTGGTGAA+TGG + chr3.4:72014684-72014703 MS.gene29052:CDS 35.0%
GGCTATACCTAAAAACCATA+GGG - chr3.4:72015465-72015484 None:intergenic 35.0%
GTAACTACCCACTTAAACTA+TGG - chr3.4:72017083-72017102 None:intergenic 35.0%
GTAATCTTAGATCCTTCAGA+AGG - chr3.4:72015400-72015419 None:intergenic 35.0%
GTACATTGTGTCAAACCAAT+TGG + chr3.4:72016273-72016292 MS.gene29052:CDS 35.0%
GTCAACTAGGTCAAGTAATA+TGG - chr3.4:72015902-72015921 None:intergenic 35.0%
TACAACATCTCACTCCTTTA+TGG - chr3.4:72017225-72017244 None:intergenic 35.0%
TATGAAGGTGAATGGGAAAA+TGG + chr3.4:72014761-72014780 MS.gene29052:CDS 35.0%
TCCGATAGAAAAAACGGTTA+CGG + chr3.4:72014572-72014591 MS.gene29052:CDS 35.0%
TCGAAACTGCTTAATCTCTT+TGG - chr3.4:72015077-72015096 None:intergenic 35.0%
TCTATCACTGTGTTCCATAA+AGG + chr3.4:72017208-72017227 MS.gene29052:intron 35.0%
TGGAAGAAGAATGTTCAAGA+AGG + chr3.4:72014635-72014654 MS.gene29052:CDS 35.0%
TGGAGTTCCGATAGAAAAAA+CGG + chr3.4:72014566-72014585 MS.gene29052:CDS 35.0%
TGTATCGTTGTGTTCCTTAA+AGG + chr3.4:72017167-72017186 MS.gene29052:intron 35.0%
TTAGGTAAAATGGAAGGTTC+TGG + chr3.4:72014503-72014522 MS.gene29052:CDS 35.0%
TTGAATGGGAATCGTTATGA+AGG + chr3.4:72014746-72014765 MS.gene29052:CDS 35.0%
TTTGGAAGCTGAAGGAATTA+TGG + chr3.4:72016709-72016728 MS.gene29052:CDS 35.0%
! AGTACTAGTTTGAACGAACA+CGG - chr3.4:72015870-72015889 None:intergenic 35.0%
! ATTACTGCCCTATGGTTTTT+AGG + chr3.4:72015455-72015474 MS.gene29052:CDS 35.0%
! ATTTTACTCCTTGTCGCATT+GGG + chr3.4:72017746-72017765 MS.gene29052:CDS 35.0%
! CGGTAAGTTGAAATATGTTC+TGG + chr3.4:72017001-72017020 MS.gene29052:intron 35.0%
! CTTCAGTCTTATCTGTCATA+CGG - chr3.4:72016483-72016502 None:intergenic 35.0%
! TTCTGGATTCAAGGGATTTT+TGG + chr3.4:72015274-72015293 MS.gene29052:intron 35.0%
! TTGAAGGTGGAAAGGATTTT+GGG + chr3.4:72014945-72014964 MS.gene29052:CDS 35.0%
! TTGAATGGGAGTTTTTATCC+TGG + chr3.4:72014884-72014903 MS.gene29052:CDS 35.0%
! TTGTATTTTCCTGATCCGTT+TGG - chr3.4:72014377-72014396 None:intergenic 35.0%
!! ATGATTTTGCTGTGACAATG+AGG + chr3.4:72014909-72014928 MS.gene29052:CDS 35.0%
!! ATGGATTACAGTCTTTTGGT+CGG + chr3.4:72016728-72016747 MS.gene29052:CDS 35.0%
!! CATAGACGATTTGACTTGAA+GGG + chr3.4:72016445-72016464 MS.gene29052:CDS 35.0%
!! GGTAACGGAGATTATTATGA+AGG + chr3.4:72014608-72014627 MS.gene29052:CDS 35.0%
!! TGGAAGAACGGTGTTATTAA+CGG + chr3.4:72014704-72014723 MS.gene29052:CDS 35.0%
!! TGTAGTAGTTCTGGATTCAA+GGG + chr3.4:72015266-72015285 MS.gene29052:intron 35.0%
!! TTGTAGTAGTTCTGGATTCA+AGG + chr3.4:72015265-72015284 MS.gene29052:intron 35.0%
!!! ACCGAGTGATTTTGATTTGA+AGG + chr3.4:72015354-72015373 MS.gene29052:CDS 35.0%
!!! TAGCCTTTTTGTTTTTCACC+TGG + chr3.4:72015480-72015499 MS.gene29052:intron 35.0%
!!! TCCGTAACCGTTTTTTCTAT+CGG - chr3.4:72014576-72014595 None:intergenic 35.0%
AACCTCTTCGAGTAAAGCTT+TGG - chr3.4:72017898-72017917 None:intergenic 40.0%
AACGATGGTTGTATCTACGA+AGG + chr3.4:72014401-72014420 MS.gene29052:CDS 40.0%
AAGAGGTTTCGTGATTTCGT+GGG + chr3.4:72017910-72017929 MS.gene29052:CDS 40.0%
AATTAATTAGGACCACGACC+TGG - chr3.4:72017424-72017443 None:intergenic 40.0%
AATTGAGATCGAGGTCTTTG+AGG - chr3.4:72016528-72016547 None:intergenic 40.0%
ACAATCCCTCTCAATTTGTC+TGG - chr3.4:72016684-72016703 None:intergenic 40.0%
ACAATTGAGGAAGCGATTTC+AGG + chr3.4:72015667-72015686 MS.gene29052:CDS 40.0%
ACCACTGTAAATATCTCCGT+CGG - chr3.4:72014543-72014562 None:intergenic 40.0%
ACCCACTTAAACTATGGATG+TGG - chr3.4:72017077-72017096 None:intergenic 40.0%
ACCGGGTGAAACTATATGTA+AGG + chr3.4:72015132-72015151 MS.gene29052:CDS 40.0%
ATCCAAAGCTTTACTCGAAG+AGG + chr3.4:72017893-72017912 MS.gene29052:CDS 40.0%
ATGTTCAAGAAGGAAAAGGG+AGG + chr3.4:72014645-72014664 MS.gene29052:CDS 40.0%
ATTAATTAGGACCACGACCT+GGG - chr3.4:72017423-72017442 None:intergenic 40.0%
ATTGAGATCGAGGTCTTTGA+GGG - chr3.4:72016527-72016546 None:intergenic 40.0%
CAATGCGACAAGGAGTAAAA+TGG - chr3.4:72017747-72017766 None:intergenic 40.0%
CACCACATCCATAGTTTAAG+TGG + chr3.4:72017072-72017091 MS.gene29052:intron 40.0%
CAGAGTGAAAAGTTTATGCG+TGG + chr3.4:72016926-72016945 MS.gene29052:CDS 40.0%
CATCTACACTATGCACAGAA+AGG - chr3.4:72016835-72016854 None:intergenic 40.0%
CATTGTGTCAAACCAATTGG+AGG + chr3.4:72016276-72016295 MS.gene29052:CDS 40.0%
CCCTTACATATAGTTTCACC+CGG - chr3.4:72015136-72015155 None:intergenic 40.0%
CCGGGTGAAACTATATGTAA+GGG + chr3.4:72015133-72015152 MS.gene29052:CDS 40.0%
CCTTCAAGTCAAATCGTCTA+TGG - chr3.4:72016447-72016466 None:intergenic 40.0%
CCTTCGTAAATAGAACCTGA+AGG - chr3.4:72014473-72014492 None:intergenic 40.0%
CGGGTGAAACTATATGTAAG+GGG + chr3.4:72015134-72015153 MS.gene29052:CDS 40.0%
CTAGGTCAAGTAATATGGGA+CGG - chr3.4:72015897-72015916 None:intergenic 40.0%
CTGATGGAAGTTGCTATGTT+GGG + chr3.4:72014816-72014835 MS.gene29052:CDS 40.0%
GAACGCTTGTTTGGTTGAAT+GGG + chr3.4:72014732-72014751 MS.gene29052:CDS 40.0%
GAAGTTGCTATGTTGGGAAT+TGG + chr3.4:72014822-72014841 MS.gene29052:CDS 40.0%
GAATAATGTAGAGCGGGAAA+CGG + chr3.4:72017380-72017399 MS.gene29052:intron 40.0%
GGAAAGAAACGTTACGGTAA+CGG + chr3.4:72014593-72014612 MS.gene29052:CDS 40.0%
GGAATCGTTATGAAGGTGAA+TGG + chr3.4:72014753-72014772 MS.gene29052:CDS 40.0%
GGTTACGGAAAGAAACGTTA+CGG + chr3.4:72014587-72014606 MS.gene29052:CDS 40.0%
GTACCAGTGCGCAAAAAAAA+TGG - chr3.4:72016800-72016819 None:intergenic 40.0%
GTTGTATCTACGAAGGTGAA+TGG + chr3.4:72014408-72014427 MS.gene29052:CDS 40.0%
TACAGCATCTCACTCCTTTA+AGG - chr3.4:72017184-72017203 None:intergenic 40.0%
TAGGTGGGAATAATGTAGAG+CGG + chr3.4:72017373-72017392 MS.gene29052:intron 40.0%
TGGTCAGCCTAATTAACACA+AGG + chr3.4:72015616-72015635 MS.gene29052:intron 40.0%
TGTTTCGCCTGCAAAGAAAT+TGG + chr3.4:72016551-72016570 MS.gene29052:CDS 40.0%
TTAAAGGAGTGAGATGCTGT+AGG + chr3.4:72017183-72017202 MS.gene29052:intron 40.0%
TTGACCAATACACCAGTCTT+GGG + chr3.4:72017716-72017735 MS.gene29052:CDS 40.0%
TTTGACCAATACACCAGTCT+TGG + chr3.4:72017715-72017734 MS.gene29052:CDS 40.0%
! AAGGAAAAGGGAGGTATGTA+TGG + chr3.4:72014654-72014673 MS.gene29052:CDS 40.0%
! ACCGTTGGGTAAATGCTTTT+TGG - chr3.4:72014318-72014337 None:intergenic 40.0%
! CATTTTACTCCTTGTCGCAT+TGG + chr3.4:72017745-72017764 MS.gene29052:CDS 40.0%
! CCACGAGAATTTTCCATTTC+CGG - chr3.4:72014450-72014469 None:intergenic 40.0%
! CCTTCAGGTTCTATTTACGA+AGG + chr3.4:72014470-72014489 MS.gene29052:CDS 40.0%
! GCAACATTTGATTTCGTCGA+AGG + chr3.4:72015539-72015558 MS.gene29052:intron 40.0%
! GGAGGTATGTATGGAAAAAC+GGG + chr3.4:72014663-72014682 MS.gene29052:CDS 40.0%
! GGGAGGTATGTATGGAAAAA+CGG + chr3.4:72014662-72014681 MS.gene29052:CDS 40.0%
! GTTGAAGGTGGAAAGGATTT+TGG + chr3.4:72014944-72014963 MS.gene29052:CDS 40.0%
! TACGAAGGCGAGTTTAAGTT+AGG + chr3.4:72014485-72014504 MS.gene29052:CDS 40.0%
! TGGGAATCTGATGGTGAAAA+AGG + chr3.4:72014980-72014999 MS.gene29052:CDS 40.0%
! TTCAACAAAGGCATACCTTC+TGG - chr3.4:72016302-72016321 None:intergenic 40.0%
! TTTTACTCCTTGTCGCATTG+GGG + chr3.4:72017747-72017766 MS.gene29052:CDS 40.0%
!! AACGGTGTTATTAACGGAAG+AGG + chr3.4:72014710-72014729 MS.gene29052:CDS 40.0%
!! ATGCTTTTTGGCGGTTCTTT+TGG - chr3.4:72014306-72014325 None:intergenic 40.0%
!! CCATAGACGATTTGACTTGA+AGG + chr3.4:72016444-72016463 MS.gene29052:CDS 40.0%
!! CCGAAGTCAAGGTTTGTTTT+TGG + chr3.4:72015822-72015841 MS.gene29052:intron 40.0%
!! CGAGTAAAGCTTTGGATCAA+CGG - chr3.4:72017890-72017909 None:intergenic 40.0%
!! GCCAAAAAGCATTTACCCAA+CGG + chr3.4:72014314-72014333 MS.gene29052:CDS 40.0%
!! GTATCGGTGTTGAATAGGAT+TGG + chr3.4:72015031-72015050 MS.gene29052:CDS 40.0%
!! GTGTTTTGTTGAAGGTGGAA+AGG + chr3.4:72014937-72014956 MS.gene29052:CDS 40.0%
!! GTTGGGTAAATGCTTTTTGG+CGG - chr3.4:72014315-72014334 None:intergenic 40.0%
!! TGCTTGTTGGTGAGATTTTC+CGG - chr3.4:72014262-72014281 None:intergenic 40.0%
!!! AAGAGGTGTTTTGTTGAAGG+TGG + chr3.4:72014932-72014951 MS.gene29052:CDS 40.0%
!!! AGGAAGAGGTGTTTTGTTGA+AGG + chr3.4:72014929-72014948 MS.gene29052:CDS 40.0%
!!! GAAGGTTCTGGAACTTTTAC+TGG + chr3.4:72014515-72014534 MS.gene29052:CDS 40.0%
!!! TCACCATTTTTTTTGCGCAC+TGG + chr3.4:72016794-72016813 MS.gene29052:CDS 40.0%
!!! TGAAGGAGAAGTTTTGGACT+AGG + chr3.4:72015371-72015390 MS.gene29052:CDS 40.0%
!!! TGGCGGTTCTTTTGGTTTTT+TGG - chr3.4:72014298-72014317 None:intergenic 40.0%
AAAATGGCTCATCCCAAGAC+TGG - chr3.4:72017731-72017750 None:intergenic 45.0%
AACAACACACCAAACGGATC+AGG + chr3.4:72014365-72014384 MS.gene29052:CDS 45.0%
AAGCAGTTTCGACGGAATTC+TGG + chr3.4:72015085-72015104 MS.gene29052:CDS 45.0%
AAGGGCAAGGTGTGTTTACT+TGG + chr3.4:72014792-72014811 MS.gene29052:CDS 45.0%
ACCCAACGGTGATTCTTACA+TGG + chr3.4:72014328-72014347 MS.gene29052:CDS 45.0%
AGAGGTTTCGTGATTTCGTG+GGG + chr3.4:72017911-72017930 MS.gene29052:CDS 45.0%
AGGTGGGAATAATGTAGAGC+GGG + chr3.4:72017374-72017393 MS.gene29052:intron 45.0%
ATCAATCGATGGAGTTCCGT+TGG + chr3.4:72015428-72015447 MS.gene29052:CDS 45.0%
ATTGAGGAAGCGATTTCAGG+TGG + chr3.4:72015670-72015689 MS.gene29052:CDS 45.0%
CAACGGCTGAGATTGATGAA+GGG - chr3.4:72017873-72017892 None:intergenic 45.0%
CATACGTGACAGAGTCAACT+AGG - chr3.4:72015915-72015934 None:intergenic 45.0%
CCAACATAGCAACTTCCATC+AGG - chr3.4:72014818-72014837 None:intergenic 45.0%
CCCAACGGTGATTCTTACAT+GGG + chr3.4:72014329-72014348 MS.gene29052:CDS 45.0%
CCCATGTAAGAATCACCGTT+GGG - chr3.4:72014332-72014351 None:intergenic 45.0%
CCGGAAATGGAAAATTCTCG+TGG + chr3.4:72014447-72014466 MS.gene29052:CDS 45.0%
CCTGATGGAAGTTGCTATGT+TGG + chr3.4:72014815-72014834 MS.gene29052:CDS 45.0%
CTTTCATCTCCTGGCAAAAG+TGG + chr3.4:72015743-72015762 MS.gene29052:CDS 45.0%
GAAGAGGTTTCGTGATTTCG+TGG + chr3.4:72017909-72017928 MS.gene29052:CDS 45.0%
GACAGGGATAGAGTCAAATC+TGG + chr3.4:72016977-72016996 MS.gene29052:CDS 45.0%
GCATAGCTGCAACTCTGTTT+GGG + chr3.4:72017563-72017582 MS.gene29052:intron 45.0%
GGAACGCTTGTTTGGTTGAA+TGG + chr3.4:72014731-72014750 MS.gene29052:CDS 45.0%
GGGAAAATGGTGTTCCGAAA+GGG + chr3.4:72014774-72014793 MS.gene29052:CDS 45.0%
GGGTTTAGTCTACGATTTGC+AGG + chr3.4:72016343-72016362 MS.gene29052:intron 45.0%
GTAAACACACCTTGCCCTTT+CGG - chr3.4:72014791-72014810 None:intergenic 45.0%
GTCAAGTAATATGGGACGGA+GGG + chr3.4:72016122-72016141 MS.gene29052:intron 45.0%
GTCAAGTAATATGGGACGGA+GGG - chr3.4:72016141-72016122 None:intergenic 45.0%
GTCACAGCAAAATCATCACC+AGG - chr3.4:72014905-72014924 None:intergenic 45.0%
TACGAAGGTGAATGGAAACG+AGG + chr3.4:72014416-72014435 MS.gene29052:CDS 45.0%
TAGGGCAGTAATCCTTCCAA+CGG - chr3.4:72015447-72015466 None:intergenic 45.0%
TCAACGGCTGAGATTGATGA+AGG - chr3.4:72017874-72017893 None:intergenic 45.0%
TCATCCCAAGACTGGTGTAT+TGG - chr3.4:72017723-72017742 None:intergenic 45.0%
TCCCATGTAAGAATCACCGT+TGG - chr3.4:72014333-72014352 None:intergenic 45.0%
TCCGACGGAGATATTTACAG+TGG + chr3.4:72014539-72014558 MS.gene29052:CDS 45.0%
TCTTACATGGGAACCTTCTC+CGG + chr3.4:72014341-72014360 MS.gene29052:CDS 45.0%
TGAAGCAGAGCTACAAGACA+GGG + chr3.4:72016961-72016980 MS.gene29052:CDS 45.0%
TGCAACTCTGTTTGGGAGTA+AGG + chr3.4:72017570-72017589 MS.gene29052:intron 45.0%
TGCATAGCTGCAACTCTGTT+TGG + chr3.4:72017562-72017581 MS.gene29052:intron 45.0%
TGGAAACGAGGAAAAGCTTC+CGG + chr3.4:72014428-72014447 MS.gene29052:CDS 45.0%
TGGGAAAATGGTGTTCCGAA+AGG + chr3.4:72014773-72014792 MS.gene29052:CDS 45.0%
TGTATCTGTAGGCACTCTGT+TGG + chr3.4:72015301-72015320 MS.gene29052:intron 45.0%
TTACGACATCAGCAAGAAGC+TGG + chr3.4:72017819-72017838 MS.gene29052:CDS 45.0%
TTGAAGCAGAGCTACAAGAC+AGG + chr3.4:72016960-72016979 MS.gene29052:CDS 45.0%
TTGCTGTGACAATGAGGAAG+AGG + chr3.4:72014915-72014934 MS.gene29052:CDS 45.0%
TTGGAAGGATTACTGCCCTA+TGG + chr3.4:72015447-72015466 MS.gene29052:CDS 45.0%
! AACTCCATCGATTGATGTGG+TGG - chr3.4:72015424-72015443 None:intergenic 45.0%
! GATGGGCAATCTTTTCTGCT+CGG + chr3.4:72016411-72016430 MS.gene29052:CDS 45.0%
! GGAACTTTTACTGGATCCGA+CGG + chr3.4:72014524-72014543 MS.gene29052:CDS 45.0%
! TGAGAGGGATTGTGCGTTTT+TGG + chr3.4:72016691-72016710 MS.gene29052:CDS 45.0%
! TGGACTAGGTTTCCTTCTGA+AGG + chr3.4:72015385-72015404 MS.gene29052:CDS 45.0%
! TGTCTTGTAGCTCTGCTTCA+AGG - chr3.4:72016961-72016980 None:intergenic 45.0%
!! AAGAAGCTTCCACTTTTGCC+AGG - chr3.4:72015755-72015774 None:intergenic 45.0%
!! TGTGCGTTTTTGGAAGCTGA+AGG + chr3.4:72016701-72016720 MS.gene29052:CDS 45.0%
!! TTCTGGTTGTTTTGCTTCCG+AGG + chr3.4:72015102-72015121 MS.gene29052:CDS 45.0%
AATGGTGTTCCGAAAGGGCA+AGG + chr3.4:72014779-72014798 MS.gene29052:CDS 50.0%
ACGGAAGAGGAACGCTTGTT+TGG + chr3.4:72014723-72014742 MS.gene29052:CDS 50.0%
AGCGGGAAACGGTTGTTTGT+GGG + chr3.4:72017391-72017410 MS.gene29052:intron 50.0%
AGGAGATGAAAGCTCCCTGA+GGG - chr3.4:72015735-72015754 None:intergenic 50.0%
ATCGATGGAGTTCCGTTGGA+AGG + chr3.4:72015432-72015451 MS.gene29052:CDS 50.0%
ATTGCCCATCACGATGAACC+GGG - chr3.4:72016401-72016420 None:intergenic 50.0%
CAAACCAATTGGAGGCCAGA+AGG + chr3.4:72016284-72016303 MS.gene29052:CDS 50.0%
CATACCTTCTGGCCTCCAAT+TGG - chr3.4:72016291-72016310 None:intergenic 50.0%
CGAGGAAAAGCTTCCGGAAA+TGG + chr3.4:72014434-72014453 MS.gene29052:CDS 50.0%
CGATACAAGCCTCTCTTCTC+AGG - chr3.4:72017154-72017173 None:intergenic 50.0%
CTGTAGGCACTCTGTTGGAA+AGG + chr3.4:72015306-72015325 MS.gene29052:intron 50.0%
GACTTGAAGGGATCGTCACA+TGG + chr3.4:72016457-72016476 MS.gene29052:CDS 50.0%
GATTGCCCATCACGATGAAC+CGG - chr3.4:72016402-72016421 None:intergenic 50.0%
GCATGCATACAAGTCACTGC+AGG + chr3.4:72017843-72017862 MS.gene29052:CDS 50.0%
GGAAAATTCTCGTGGCCTTC+AGG + chr3.4:72014455-72014474 MS.gene29052:CDS 50.0%
GGAGAATATTCAGCGAGGAC+CGG + chr3.4:72017932-72017951 MS.gene29052:CDS 50.0%
GGGATAGAGTCAAATCTGGC+CGG + chr3.4:72016981-72017000 MS.gene29052:CDS 50.0%
GGTCAAGTAATATGGGACGG+AGG + chr3.4:72016121-72016140 MS.gene29052:intron 50.0%
GGTCAAGTAATATGGGACGG+AGG - chr3.4:72016140-72016121 None:intergenic 50.0%
GGTGTGTTTACTTGGCCTGA+TGG + chr3.4:72014800-72014819 MS.gene29052:CDS 50.0%
GTCGAAGAACCTGAGAAGAG+AGG + chr3.4:72017142-72017161 MS.gene29052:intron 50.0%
TACGCCACCACATCAATCGA+TGG + chr3.4:72015417-72015436 MS.gene29052:CDS 50.0%
TCCGGCAACAACACACCAAA+CGG + chr3.4:72014359-72014378 MS.gene29052:CDS 50.0%
TGCTTCCGAGGTTAAGAGAC+CGG + chr3.4:72015114-72015133 MS.gene29052:CDS 50.0%
TTCACCCGGTCTCTTAACCT+CGG - chr3.4:72015122-72015141 None:intergenic 50.0%
TTGTGGAAATGCTGCCCTCA+GGG + chr3.4:72015718-72015737 MS.gene29052:CDS 50.0%
TTTGTGGAAATGCTGCCCTC+AGG + chr3.4:72015717-72015736 MS.gene29052:CDS 50.0%
! CGGAACTCCATCGATTGATG+TGG - chr3.4:72015427-72015446 None:intergenic 50.0%
!! TCCGTTTGGTGTGTTGTTGC+CGG - chr3.4:72014363-72014382 None:intergenic 50.0%
ACAGACCCGGTTCATCGTGA+TGG + chr3.4:72016393-72016412 MS.gene29052:intron 55.0%
CAGACCCGGTTCATCGTGAT+GGG + chr3.4:72016394-72016413 MS.gene29052:intron 55.0%
CAGGAGATGAAAGCTCCCTG+AGG - chr3.4:72015736-72015755 None:intergenic 55.0%
CGGGAAACGGTTGTTTGTGG+GGG + chr3.4:72017393-72017412 MS.gene29052:intron 55.0%
CGTGGGGAGAATATTCAGCG+AGG + chr3.4:72017927-72017946 MS.gene29052:CDS 55.0%
CTCAGGGAGCTTTCATCTCC+TGG + chr3.4:72015734-72015753 MS.gene29052:CDS 55.0%
GAGCGGGAAACGGTTGTTTG+TGG + chr3.4:72017390-72017409 MS.gene29052:intron 55.0%
GCGGGAAACGGTTGTTTGTG+GGG + chr3.4:72017392-72017411 MS.gene29052:intron 55.0%
GCTTCCGAGGTTAAGAGACC+GGG + chr3.4:72015115-72015134 MS.gene29052:CDS 55.0%
TAGGTCTCCCCAATGCGACA+AGG - chr3.4:72017757-72017776 None:intergenic 55.0%
TGCTGAAGTGTGACCGGGTA+CGG - chr3.4:72014238-72014257 None:intergenic 55.0%
! GAGATCGAGGTCTTTGAGGG+TGG - chr3.4:72016524-72016543 None:intergenic 55.0%
! TGGTGTGTTGTTGCCGGAGA+AGG - chr3.4:72014357-72014376 None:intergenic 55.0%
! TTGTTTGTGGGGGCATACCC+AGG + chr3.4:72017403-72017422 MS.gene29052:intron 55.0%
!! CTGAGGAGGAGGTGTTGTTG+TGG - chr3.4:72014187-72014206 None:intergenic 55.0%
CAAGAGCAGAGCGCATGGCT+CGG + chr3.4:72017683-72017702 MS.gene29052:CDS 60.0%
TCCGGCTGCTGAAGTGTGAC+CGG - chr3.4:72014244-72014263 None:intergenic 60.0%
AACCGGCGGCTGTGAGTCTG+AGG - chr3.4:72014204-72014223 None:intergenic 65.0%
CCCGGTCACACTTCAGCAGC+CGG + chr3.4:72014240-72014259 MS.gene29052:CDS 65.0%
CCGGCTGCTGAAGTGTGACC+GGG - chr3.4:72014243-72014262 None:intergenic 65.0%
CGGCTGTGAGTCTGAGGAGG+AGG - chr3.4:72014198-72014217 None:intergenic 65.0%
CTCCTCAGACTCACAGCCGC+CGG + chr3.4:72014199-72014218 MS.gene29052:CDS 65.0%
GAAGTGTGACCGGGTACGGC+CGG - chr3.4:72014234-72014253 None:intergenic 65.0%
GCCAGCAAGAGCAGAGCGCA+TGG + chr3.4:72017678-72017697 MS.gene29052:CDS 65.0%
GCCATGCGCTCTGCTCTTGC+TGG - chr3.4:72017682-72017701 None:intergenic 65.0%
GTACGGCCGGTGGTAGCAAC+CGG - chr3.4:72014221-72014240 None:intergenic 65.0%
TTGCTACCACCGGCCGTACC+CGG + chr3.4:72014222-72014241 MS.gene29052:CDS 65.0%
CGGCGGCTGTGAGTCTGAGG+AGG - chr3.4:72014201-72014220 None:intergenic 70.0%
! CAGCCGCCGGTTGCTACCAC+CGG + chr3.4:72014212-72014231 MS.gene29052:CDS 70.0%
! GAGCAGAGCGCATGGCTCGG+AGG + chr3.4:72017686-72017705 MS.gene29052:CDS 70.0%
! GTGGGGGCATACCCAGGTCG+TGG + chr3.4:72017409-72017428 MS.gene29052:intron 70.0%
CGGCCGGTGGTAGCAACCGG+CGG - chr3.4:72014218-72014237 None:intergenic 75.0%
GTGTGACCGGGTACGGCCGG+TGG - chr3.4:72014231-72014250 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 72014161 72017957 72014161 ID=MS.gene29052
chr3.4 mRNA 72014161 72017957 72014161 ID=MS.gene29052.t1;Parent=MS.gene29052
chr3.4 exon 72014161 72015200 72014161 ID=MS.gene29052.t1.exon1;Parent=MS.gene29052.t1
chr3.4 CDS 72014161 72015200 72014161 ID=cds.MS.gene29052.t1;Parent=MS.gene29052.t1
chr3.4 exon 72015312 72015476 72015312 ID=MS.gene29052.t1.exon2;Parent=MS.gene29052.t1
chr3.4 CDS 72015312 72015476 72015312 ID=cds.MS.gene29052.t1;Parent=MS.gene29052.t1
chr3.4 exon 72015667 72015832 72015667 ID=MS.gene29052.t1.exon3;Parent=MS.gene29052.t1
chr3.4 CDS 72015667 72015832 72015667 ID=cds.MS.gene29052.t1;Parent=MS.gene29052.t1
chr3.4 exon 72016195 72016305 72016195 ID=MS.gene29052.t1.exon4;Parent=MS.gene29052.t1
chr3.4 CDS 72016195 72016305 72016195 ID=cds.MS.gene29052.t1;Parent=MS.gene29052.t1
chr3.4 exon 72016397 72016590 72016397 ID=MS.gene29052.t1.exon5;Parent=MS.gene29052.t1
chr3.4 CDS 72016397 72016590 72016397 ID=cds.MS.gene29052.t1;Parent=MS.gene29052.t1
chr3.4 exon 72016685 72016815 72016685 ID=MS.gene29052.t1.exon6;Parent=MS.gene29052.t1
chr3.4 CDS 72016685 72016815 72016685 ID=cds.MS.gene29052.t1;Parent=MS.gene29052.t1
chr3.4 exon 72016909 72017002 72016909 ID=MS.gene29052.t1.exon7;Parent=MS.gene29052.t1
chr3.4 CDS 72016909 72017002 72016909 ID=cds.MS.gene29052.t1;Parent=MS.gene29052.t1
chr3.4 exon 72017648 72017957 72017648 ID=MS.gene29052.t1.exon8;Parent=MS.gene29052.t1
chr3.4 CDS 72017648 72017957 72017648 ID=cds.MS.gene29052.t1;Parent=MS.gene29052.t1
Gene Sequence

>MS.gene29052

ATGCGTCAATCACTTCTCTCTAACCACAACAACACCTCCTCCTCAGACTCACAGCCGCCGGTTGCTACCACCGGCCGTACCCGGTCACACTTCAGCAGCCGGAAAATCTCACCAACAAGCATAACAATCGAATTCCAAAAAACCAAAAGAACCGCCAAAAAGCATTTACCCAACGGTGATTCTTACATGGGAACCTTCTCCGGCAACAACACACCAAACGGATCAGGAAAATACAAATGGAACGATGGTTGTATCTACGAAGGTGAATGGAAACGAGGAAAAGCTTCCGGAAATGGAAAATTCTCGTGGCCTTCAGGTTCTATTTACGAAGGCGAGTTTAAGTTAGGTAAAATGGAAGGTTCTGGAACTTTTACTGGATCCGACGGAGATATTTACAGTGGTTCATGGAGTTCCGATAGAAAAAACGGTTACGGAAAGAAACGTTACGGTAACGGAGATTATTATGAAGGTTGGTGGAAGAAGAATGTTCAAGAAGGAAAAGGGAGGTATGTATGGAAAAACGGGAATGAGTATATTGGTGAATGGAAGAACGGTGTTATTAACGGAAGAGGAACGCTTGTTTGGTTGAATGGGAATCGTTATGAAGGTGAATGGGAAAATGGTGTTCCGAAAGGGCAAGGTGTGTTTACTTGGCCTGATGGAAGTTGCTATGTTGGGAATTGGAATAATAATAGTAATAATAATGATTTTCAATCTTCTTTATTGAATGGGAGTTTTTATCCTGGTGATGATTTTGCTGTGACAATGAGGAAGAGGTGTTTTGTTGAAGGTGGAAAGGATTTTGGGAAGATTTGTATTTGGGAATCTGATGGTGAAAAAGGTGATATAACTTGTGATATTGTTGATAATGTATCGGTGTTGAATAGGATTGGAAGTGAAAGTGTTTCAGATCCCAAAGAGATTAAGCAGTTTCGACGGAATTCTGGTTGTTTTGCTTCCGAGGTTAAGAGACCGGGTGAAACTATATGTAAGGGGCATAAGAATTATGATCTTATGCTTAATCTTCAATTGGGTATAAGGTAAAGTTTGAATTTTATGTTGCTGTGTTCATTGCTTGTTTGTGATTTTGTGTGATTTTGTAATTTGTAGTAGTTCTGGATTCAAGGGATTTTTGGTTTGTGTATCTGTAGGCACTCTGTTGGAAAGGAAGCTTCTATATCGAGAGAGCTAATACCGAGTGATTTTGATTTGAAGGAGAAGTTTTGGACTAGGTTTCCTTCTGAAGGATCTAAGATTACGCCACCACATCAATCGATGGAGTTCCGTTGGAAGGATTACTGCCCTATGGTTTTTAGGTATAGCCTTTTTGTTTTTCACCTGGTAGTTAATGTTAATCATTTCTTTAGCACTCACATAGGCAACATTTGATTTCGTCGAAGGTTGTTGCAAAATCTTTACTAGTTAAGCTTGTTGCAGTTTCGTTCTTTACATTTCTGGTCAGCCTAATTAACACAAGGAGAATAATGTTATGGTTTTGAATTTCAGACAATTGAGGAAGCGATTTCAGGTGGATCCTGCTGATTACATGTTAGCTATTTGTGGAAATGCTGCCCTCAGGGAGCTTTCATCTCCTGGCAAAAGTGGAAGCTTCTTCTACTTGACCCAAGATGACAGATTTATGATTAAGACAGTGAAAAAATCCGAAGTCAAGGTTTGTTTTTGGTTGTTAAATTGAAAACATTTTACCGTGTTCGTTCAAACTAGTACTCCCTCCGTCCCATATTACTTGACCTAGTTGACTCTGTCACGTATGCCAATGCACAATTTTAAACTTAAATTTCTTTAATAATCTAGTATAAAAAATTACAAAAATTTGATATTTTGAAAATATTAATCGAGACGAATCTAACAACATCTTATATGCTATATTTTGTTTTTATATATTAGTAGAAAAATAGAGTCAAAGCATGTTACATGAATAGTGCAAATATTCTAAATAGGTCAAGTAATATGGGACGGAGGGAGTATGATGTACATTTGTATTGACAGCTGAGTTTTGTGACTAACTTATAGATACTTCTTCGGATGCTTCGAAGTTATTACGAACATGTTTCTCAATATGAGGATTCACTTGTGACAAAATTCTATGGGGTACATTGTGTCAAACCAATTGGAGGCCAGAAGGTATGCCTTTGTTGAAGATAAATTATTGCTATTTTAAGGGTTTAGTCTACGATTTGCAGGAACTGAAAATTTGTTGTTATTTAAAACACAGACCCGGTTCATCGTGATGGGCAATCTTTTCTGCTCGGAATATCCAATCCATAGACGATTTGACTTGAAGGGATCGTCACATGGCCGTATGACAGATAAGACTGAAGATGAAATTGATGAAACTACCACCCTCAAAGACCTCGATCTCAATTTTGTGTTTCGCCTGCAAAGAAATTGGTTCAAAGATCTCATCACGTAAGTTGCTAGTTAGCATTTTCTGTGCTGCTACTTAGAGATGATACATCATGTATATCTGTTAAATTAAAATTTCCTTGATATAATTGTCCAGACAAATTGAGAGGGATTGTGCGTTTTTGGAAGCTGAAGGAATTATGGATTACAGTCTTTTGGTCGGCGTTCATTTTCGTGATGATAATACTTGTGACAAAATGGGATTATCACCATTTTTTTTGCGCACTGGTACTCATTAATATCTCCTTTCTGTGCATAGTGTAGATGAATATTATGTAATAGTAATTGAACTAAGACTTATTATATTGTTTATCCTTTTAGGAAAGCATGACTCTTATCAGAGTGAAAAGTTTATGCGTGGTTATCGCTTCCTTGAAGCAGAGCTACAAGACAGGGATAGAGTCAAATCTGGCCGGTAAGTTGAAATATGTTCTGGTTTTTTGAATTTAAGTTGATAAAATAATTAGGTTGTTTAGACAATTGACACCACATCCATAGTTTAAGTGGGTAGTTACATTGTGTTTCCCTAAATCAACATTTTATAGAATAATTAGGTCGAAGAACCTGAGAAGAGAGGCTTGTATCGTTGTGTTCCTTAAAGGAGTGAGATGCTGTAGGCTTCTATCACTGTGTTCCATAAAGGAGTGAGATGTTGTAGGCTTGTTATTTTATGTTATGATTATAAGTTTTAGTTCTCTGTTATTTTAAATGCCTAATCATTCATATTTTTATGTTGACGACATTAATGGAAATAATTGCAATTAGTTTGAATTATCTTTAGCAAGTAGGTGGGAATAATGTAGAGCGGGAAACGGTTGTTTGTGGGGGCATACCCAGGTCGTGGTCCTAATTAATTGATTGCTTGTTTCTGGAAGTTTTTTTTTTATACCATCTCTATATTTTATTGGCAATCTGAATTTGTCCTATACTTCAGCATTTATAAAGTAGTTATGGTTGTTGGTTTCTAATGTGAATGCATAGCTGCAACTCTGTTTGGGAGTAAGGAGATTAATCATATTTGTAAATTTTGACGTGTTAAGTAGGATTTTTCTTGTTTCAGGAAATCATTGATTAGGTTAGGAGCAAATATGCCAGCAAGAGCAGAGCGCATGGCTCGGAGGAGTGATTTTGACCAATACACCAGTCTTGGGATGAGCCATTTTACTCCTTGTCGCATTGGGGAGACCTATGATGTTGTTCTATATTTTGGGATTATAGACATTTTGCAAGATTACGACATCAGCAAGAAGCTGGAGCATGCATACAAGTCACTGCAGGTTGACCCTTCATCAATCTCAGCCGTTGATCCAAAGCTTTACTCGAAGAGGTTTCGTGATTTCGTGGGGAGAATATTCAGCGAGGACCGGTAG
Protein sequence

>MS.gene29052.t1

MRQSLLSNHNNTSSSDSQPPVATTGRTRSHFSSRKISPTSITIEFQKTKRTAKKHLPNGDSYMGTFSGNNTPNGSGKYKWNDGCIYEGEWKRGKASGNGKFSWPSGSIYEGEFKLGKMEGSGTFTGSDGDIYSGSWSSDRKNGYGKKRYGNGDYYEGWWKKNVQEGKGRYVWKNGNEYIGEWKNGVINGRGTLVWLNGNRYEGEWENGVPKGQGVFTWPDGSCYVGNWNNNSNNNDFQSSLLNGSFYPGDDFAVTMRKRCFVEGGKDFGKICIWESDGEKGDITCDIVDNVSVLNRIGSESVSDPKEIKQFRRNSGCFASEVKRPGETICKGHKNYDLMLNLQLGIRHSVGKEASISRELIPSDFDLKEKFWTRFPSEGSKITPPHQSMEFRWKDYCPMVFRQLRKRFQVDPADYMLAICGNAALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKILLRMLRSYYEHVSQYEDSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRMTDKTEDEIDETTTLKDLDLNFVFRLQRNWFKDLITQIERDCAFLEAEGIMDYSLLVGVHFRDDNTCDKMGLSPFFLRTGKHDSYQSEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERMARRSDFDQYTSLGMSHFTPCRIGETYDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFVGRIFSEDR