AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29341

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29341.t1 MTR_7g113410 97.347 867 21 1 1 865 1 867 0.0 1753
MS.gene29341.t1 MTR_1g083020 75.029 865 209 4 1 865 1 858 0.0 1350
MS.gene29341.t1 MTR_1g104650 64.941 850 288 6 24 865 9 856 0.0 1176
MS.gene29341.t1 MTR_8g018420 60.093 862 316 8 20 865 7 856 0.0 1081
MS.gene29341.t1 MTR_2g099570 59.591 881 320 10 1 865 1 861 0.0 1080
MS.gene29341.t1 MTR_2g099560 59.209 885 319 10 1 865 1 863 0.0 1080
MS.gene29341.t1 MTR_8g020990 56.879 865 339 8 24 865 15 868 0.0 1004
MS.gene29341.t1 MTR_8g018730 57.324 867 332 9 24 865 11 864 0.0 1004
MS.gene29341.t1 MTR_8g018430 56.562 861 344 8 24 865 12 861 0.0 1004
MS.gene29341.t1 MTR_8g018735 57.534 876 331 10 15 865 6 865 0.0 1003
MS.gene29341.t1 MTR_5g024020 56.912 868 335 11 24 865 13 867 0.0 1003
MS.gene29341.t1 MTR_3g081130 56.069 865 350 8 19 865 6 858 0.0 1000
MS.gene29341.t1 MTR_8g018510 55.849 872 348 10 19 865 10 869 0.0 999
MS.gene29341.t1 MTR_8g018570 56.813 866 340 9 24 865 15 870 0.0 996
MS.gene29341.t1 MTR_8g018550 56.763 865 340 7 24 865 15 868 0.0 993
MS.gene29341.t1 MTR_8g018690 55.743 888 347 10 1 865 1 865 0.0 989
MS.gene29341.t1 MTR_8g018520 56.301 865 344 7 24 865 15 868 0.0 987
MS.gene29341.t1 MTR_3g081130 57.967 797 322 6 70 865 2 786 0.0 970
MS.gene29341.t1 MTR_8g018730 55.671 864 321 8 24 865 11 834 0.0 965
MS.gene29341.t1 MTR_8g018690 54.167 888 341 11 1 865 1 845 0.0 949
MS.gene29341.t1 MTR_5g024020 54.608 868 319 12 24 865 13 831 0.0 944
MS.gene29341.t1 MTR_8g018450 53.757 865 333 11 22 865 10 828 0.0 926
MS.gene29341.t1 MTR_8g018620 51.874 854 343 15 24 865 10 807 0.0 852
MS.gene29341.t1 MTR_8g018650 51.114 853 351 13 24 865 10 807 0.0 848
MS.gene29341.t1 MTR_8g018590 52.536 828 338 15 54 865 35 823 0.0 829
MS.gene29341.t1 MTR_8g018730 62.862 587 211 4 282 865 2 584 0.0 769
MS.gene29341.t1 MTR_8g020970 46.746 845 437 12 24 864 91 926 0.0 758
MS.gene29341.t1 MTR_8g080230 44.183 851 442 17 24 865 90 916 0.0 708
MS.gene29341.t1 MTR_8g011340 44.015 802 424 13 36 824 37 826 0.0 694
MS.gene29341.t1 MTR_3g479460 43.773 827 436 14 49 865 96 903 0.0 675
MS.gene29341.t1 MTR_3g079450 43.066 822 443 13 52 865 98 902 0.0 659
MS.gene29341.t1 MTR_8g018735 55.377 623 239 10 18 615 7 615 0.0 655
MS.gene29341.t1 MTR_4g066170 42.443 827 451 15 46 865 98 906 0.0 651
MS.gene29341.t1 MTR_3g079420 43.137 867 458 14 12 865 21 865 0.0 647
MS.gene29341.t1 MTR_4g088810 41.523 814 436 14 57 864 115 894 0.0 623
MS.gene29341.t1 MTR_8g021020 62.785 395 146 1 472 865 37 431 0.0 532
MS.gene29341.t1 MTR_6g452500 42.951 610 330 9 250 853 13 610 2.07e-174 518
MS.gene29341.t1 MTR_8g020970 45.882 595 310 11 24 615 91 676 3.27e-169 507
MS.gene29341.t1 MTR_3g079450 42.982 570 302 12 52 615 98 650 2.90e-141 434
MS.gene29341.t1 MTR_7g012030 57.143 119 50 1 518 635 85 203 5.61e-41 150
MS.gene29341.t1 MTR_6g046330 51.538 130 51 2 518 635 75 204 8.34e-36 138
MS.gene29341.t1 MTR_3g107560 37.885 227 78 7 643 865 7 174 1.05e-35 133
MS.gene29341.t1 MTR_8g463810 33.628 226 84 5 427 651 197 357 9.16e-28 117
MS.gene29341.t1 MTR_7g113408 77.049 61 14 0 759 819 9 69 1.12e-26 105
MS.gene29341.t1 MTR_2g005920 62.500 56 21 0 739 794 58 113 2.10e-17 79.3
MS.gene29341.t1 MTR_4g088805 41.758 91 52 1 775 864 1 91 1.36e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29341.t1 AT1G55020 68.743 867 261 6 1 865 1 859 0.0 1246
MS.gene29341.t1 AT3G22400 65.533 853 282 5 24 865 35 886 0.0 1181
MS.gene29341.t1 AT1G17420 44.208 846 456 14 24 865 86 919 0.0 717
MS.gene29341.t1 AT1G72520 43.262 846 465 13 24 865 92 926 0.0 704
MS.gene29341.t1 AT3G45140 42.926 834 430 16 46 865 95 896 0.0 668
MS.gene29341.t1 AT3G45140 44.574 774 395 13 106 865 1 754 0.0 658
MS.gene29341.t1 AT1G67560 42.857 833 430 16 53 865 111 917 0.0 637

Find 192 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTCACTGTTTGCATCTT+TGG 0.153160 7.2:-3805882 None:intergenic
TGTTGATTCACCAGCTATTA+AGG 0.193370 7.2:-3802911 None:intergenic
GTTAGGCCACTTTCACTTCT+AGG 0.225209 7.2:-3806344 None:intergenic
TTCATGAGTTGGTGGGAAAA+AGG 0.244185 7.2:+3800572 MS.gene29341:CDS
GTCATCATTCTTGTAGTAAA+AGG 0.263842 7.2:-3805772 None:intergenic
ATTTCAAATGGACACACTAT+TGG 0.263866 7.2:-3806381 None:intergenic
ACAAAAGAAGTTGTTTATAT+TGG 0.264720 7.2:+3804750 MS.gene29341:CDS
TCAAATAGTGATTCTAGTTC+AGG 0.291856 7.2:-3803821 None:intergenic
AAACTTGCACAATCATTATA+TGG 0.292143 7.2:+3805913 MS.gene29341:CDS
GATTGATCGCCGTAGACTTT+AGG 0.299463 7.2:-3804535 None:intergenic
ATACAAGGTTACATTTGATT+TGG 0.306826 7.2:+3802933 MS.gene29341:CDS
GTTTACACGCCTGCCGAAAA+TGG 0.309607 7.2:+3804943 MS.gene29341:CDS
ATCTACTGGCAGTGCTTGTT+CGG 0.312252 7.2:-3805375 None:intergenic
ACATATTTCGGACCTTTATC+AGG 0.315599 7.2:-3803391 None:intergenic
TTGACCCTTGAAAATGTTCC+TGG 0.324876 7.2:+3803027 MS.gene29341:CDS
CCTGTGCCTCAAGTGATTAA+AGG 0.326223 7.2:+3804004 MS.gene29341:CDS
GGCACCATGTTGATCTCCTT+TGG 0.326521 7.2:-3804911 None:intergenic
TTTGATTTGGATGATGATAT+AGG 0.327711 7.2:+3802946 MS.gene29341:CDS
AAATATGTTCGTCCAGTTCT+TGG 0.331640 7.2:+3803406 MS.gene29341:CDS
TTGGAAGCATTTGACAGGTT+TGG 0.339988 7.2:+3806218 MS.gene29341:CDS
AGGGTGCAGTTAAAAGAATT+AGG 0.341496 7.2:+3803915 MS.gene29341:CDS
GATACACTGTGGCCTCTAAA+AGG 0.347158 7.2:-3805298 None:intergenic
CCCTGTCCCATTCTTTCAGT+TGG 0.350304 7.2:-3803333 None:intergenic
TGCAATCAACACATGGGTTC+AGG 0.362134 7.2:+3805740 MS.gene29341:CDS
GTTCCAAGGGACGAAAGATT+TGG 0.364392 7.2:+3803737 MS.gene29341:CDS
TTGAGTGCCTCATTTCTTGA+TGG 0.365038 7.2:+3800547 MS.gene29341:CDS
TCCACTTTATATGCAACTCT+TGG 0.374342 7.2:+3803061 MS.gene29341:CDS
TCTACTGGCAGTGCTTGTTC+GGG 0.375437 7.2:-3805374 None:intergenic
TTTCAAATGGACACACTATT+GGG 0.377956 7.2:-3806380 None:intergenic
AGAACTGGACGAACATATTT+CGG 0.379753 7.2:-3803403 None:intergenic
AGAAGTGAAAGTGGCCTAAC+TGG 0.381679 7.2:+3806347 MS.gene29341:CDS
TGACAACTCCATGGCATACT+TGG 0.383790 7.2:-3805324 None:intergenic
CGGTGGACGGGCTAGAGATT+TGG 0.384457 7.2:+3805715 MS.gene29341:CDS
TGAAAATTCCATCTGGCAAT+TGG 0.385842 7.2:+3804969 MS.gene29341:CDS
CATCAGCGCTTTATAAGGAT+TGG 0.389682 7.2:+3805345 MS.gene29341:CDS
CTTGAAACTTTAAGAGGCTC+TGG 0.391703 7.2:+3803301 MS.gene29341:CDS
TCAAAGCTATCAAACTCATT+AGG 0.392213 7.2:-3803851 None:intergenic
TTATGCATACTATAATGATT+TGG 0.395542 7.2:+3803363 MS.gene29341:CDS
GAAGAACTTGAAACTTTAAG+AGG 0.395712 7.2:+3803295 MS.gene29341:CDS
GCGATCAATCTAGCACAATA+AGG 0.397443 7.2:+3804548 MS.gene29341:CDS
TGTTCTTATTATTATCATCA+TGG 0.417487 7.2:-3800459 None:intergenic
TGACCAAATCTTTCGTCCCT+TGG 0.417738 7.2:-3803740 None:intergenic
GCACAATTGCAGACTCTTGT+TGG 0.420832 7.2:+3806101 MS.gene29341:CDS
CAACTTGTAAGTGCTGATAA+AGG 0.421085 7.2:+3800604 MS.gene29341:CDS
GTTGATTCACCAGCTATTAA+GGG 0.423127 7.2:-3802910 None:intergenic
TACTCTATAGTTCCTTTCTC+AGG 0.424524 7.2:-3806029 None:intergenic
TCACTGGACCCTCCAAGAAC+TGG 0.432854 7.2:-3803418 None:intergenic
GTTGTCATCAGCGCTTTATA+AGG 0.438529 7.2:+3805340 MS.gene29341:CDS
AGGATGCAATAGTTTATGAA+TGG 0.446487 7.2:-3805213 None:intergenic
GCACCATGTTGATCTCCTTT+GGG 0.451509 7.2:-3804910 None:intergenic
TTCCAGTCTTCTAGATATGC+AGG 0.457636 7.2:-3802874 None:intergenic
TCTAGCCCGTCCACCGCGTA+AGG 0.463298 7.2:-3805708 None:intergenic
GGGTGCAGTTAAAAGAATTA+GGG 0.463960 7.2:+3803916 MS.gene29341:CDS
GATTTGGCGGATCCTGATAA+AGG 0.466833 7.2:+3803379 MS.gene29341:CDS
TTTGAAGGCAATGGCATGAA+AGG 0.468723 7.2:+3802838 MS.gene29341:intron
GTGAATATCCTTACCCTCGC+AGG 0.469001 7.2:+3803437 MS.gene29341:CDS
CGACTTATTGTTGGACGGTT+CGG 0.469027 7.2:-3805996 None:intergenic
CCTTTAATCACTTGAGGCAC+AGG 0.470108 7.2:-3804004 None:intergenic
GTTCTTCCCCTGCGAGGGTA+AGG 0.472026 7.2:-3803445 None:intergenic
CCACTTTATATGCAACTCTT+GGG 0.477995 7.2:+3803062 MS.gene29341:CDS
TCCAACTGAAAGAATGGGAC+AGG 0.478992 7.2:+3803332 MS.gene29341:CDS
CCCAAGAGTTGCATATAAAG+TGG 0.479128 7.2:-3803062 None:intergenic
AAATGGGACTTTGAAGCCAT+TGG 0.481148 7.2:+3804864 MS.gene29341:CDS
CTTGAGGCACAGGATATTTG+AGG 0.483024 7.2:-3803994 None:intergenic
AATAGACCACCCGCAAAGTC+AGG 0.483212 7.2:+3803469 MS.gene29341:CDS
GGATCTAGCTTAGATGTTGG+TGG 0.484972 7.2:-3804514 None:intergenic
CTACATGCAGCTGTAAACTT+TGG 0.486717 7.2:+3805948 MS.gene29341:CDS
TATTATCATCATGGATGCTA+AGG 0.487282 7.2:-3800450 None:intergenic
GTCTACACATTCTTCTGATG+AGG 0.487286 7.2:+3806145 MS.gene29341:CDS
CGTCAACTGTGAGTCCATCC+AGG 0.496070 7.2:-3804591 None:intergenic
TCTTGATGGTGTTCATGAGT+TGG 0.498587 7.2:+3800561 MS.gene29341:CDS
CTAGGATAAAGCAAAGTGTA+TGG 0.501452 7.2:-3806326 None:intergenic
AAAGCCGAACCTGACTTTGC+GGG 0.501840 7.2:-3803478 None:intergenic
CTTTATCCTAGAAGTGAAAG+TGG 0.502123 7.2:+3806338 MS.gene29341:CDS
ATTTCTTTGAGCATTTCAGC+AGG 0.502738 7.2:-3803947 None:intergenic
TTCTTAATTAGAAATGCTCC+TGG 0.503477 7.2:-3802973 None:intergenic
ATAGCATCCAACTGAAAGAA+TGG 0.504063 7.2:+3803326 MS.gene29341:CDS
AGCCATTGGAAGCATTTGAC+AGG 0.504173 7.2:+3806213 MS.gene29341:CDS
TACCTCTTGACAAGATCTAC+TGG 0.505972 7.2:-3805389 None:intergenic
TGGGAATGCCTGCACCAGTT+AGG 0.507950 7.2:-3806361 None:intergenic
GATTACCCTTACGCGGTGGA+CGG 0.508806 7.2:+3805702 MS.gene29341:CDS
AAGATGCAGAACTACAATCT+TGG 0.510627 7.2:+3805805 MS.gene29341:CDS
GGCATATGTCTTTGTAGAAG+TGG 0.510645 7.2:-3804815 None:intergenic
GCAAACAGTGAAAGAGTTGA+CGG 0.511807 7.2:+3805890 MS.gene29341:CDS
TGTTGGTTATTTCAGAGGAA+TGG 0.512482 7.2:+3805632 MS.gene29341:intron
GAAAGTGGCCTAACTGGTGC+AGG 0.514023 7.2:+3806353 MS.gene29341:CDS
AAGAATGACCGCATTATGAG+AGG 0.514331 7.2:+3800481 MS.gene29341:CDS
CTTGAAAATGTTCCTGGCCA+AGG 0.515296 7.2:+3803033 MS.gene29341:CDS
CGTCGATTCATGCCTGAGAA+AGG 0.516325 7.2:+3806017 MS.gene29341:CDS
AATGGCATGAAAGGAAAAGT+TGG 0.517655 7.2:+3802847 MS.gene29341:CDS
TTAGGATCTAGCTTAGATGT+TGG 0.517902 7.2:-3804517 None:intergenic
AGGCGTGTAAACATTACTAA+TGG 0.517921 7.2:-3804932 None:intergenic
TAGCATCCAACTGAAAGAAT+GGG 0.518141 7.2:+3803327 MS.gene29341:CDS
ATGGTGTTGAAAATTCCATC+TGG 0.518818 7.2:+3804962 MS.gene29341:CDS
TTCATTGTGTCGCGGAAATG+AGG 0.519038 7.2:-3805233 None:intergenic
TTCGGTGAGTAACCTGCAAA+AGG 0.521926 7.2:-3805978 None:intergenic
ATTATTAGTCGAAGGCCATA+CGG 0.523538 7.2:-3805675 None:intergenic
CTTTATCAGCACTTACAAGT+TGG 0.528558 7.2:-3800603 None:intergenic
TCTTCTCTATACTTAAGAAG+TGG 0.528859 7.2:-3803274 None:intergenic
ATGAATCGACGACTTATTGT+TGG 0.529367 7.2:-3806005 None:intergenic
ATCAGATATTGAGAGCAGCC+TGG 0.529897 7.2:+3804573 MS.gene29341:CDS
GTAAATCCTGTCATAATTCG+TGG 0.529907 7.2:+3804288 MS.gene29341:CDS
TACTTAAACTCTATGAAGGT+GGG 0.530656 7.2:+3803879 MS.gene29341:CDS
ATGCAGAACTACAATCTTGG+TGG 0.532486 7.2:+3805808 MS.gene29341:CDS
GACATGTGATGCAGAGCCAT+TGG 0.534613 7.2:+3806199 MS.gene29341:CDS
CGACAAATCCTCATCAATGC+AGG 0.538234 7.2:+3805272 MS.gene29341:CDS
AAAAGCCGAACCTGACTTTG+CGG 0.538390 7.2:-3803479 None:intergenic
ATGGCATGAAAGGAAAAGTT+GGG 0.539672 7.2:+3802848 MS.gene29341:CDS
CTGTTTGCAGATATAATGAA+TGG 0.540083 7.2:-3805170 None:intergenic
GTTTGCATCTTTGGCCACCA+AGG 0.540490 7.2:-3805873 None:intergenic
AAGCTAGATCCTAAAGTCTA+CGG 0.541002 7.2:+3804526 MS.gene29341:CDS
TGTTGATCTCCTTTGGGATG+TGG 0.542065 7.2:-3804904 None:intergenic
ACAATCACACCCTTAATAGC+TGG 0.542399 7.2:+3802901 MS.gene29341:CDS
ATCATCAGCTTATCAGCCAC+TGG 0.542828 7.2:+3805025 MS.gene29341:CDS
AGCCTGCATATCTAGAAGAC+TGG 0.544605 7.2:+3802872 MS.gene29341:CDS
CTATACTTAAGAAGTGGAGC+TGG 0.545546 7.2:-3803268 None:intergenic
GATATTGAGAGCAGCCTGGA+TGG 0.545736 7.2:+3804577 MS.gene29341:CDS
TGCATACTATAATGATTTGG+CGG 0.546489 7.2:+3803366 MS.gene29341:CDS
TCTTCTGATGAGGTCTACCT+TGG 0.546946 7.2:+3806155 MS.gene29341:CDS
ATTACCCTTACGCGGTGGAC+GGG 0.548866 7.2:+3805703 MS.gene29341:CDS
TATTAGTTCTTCCCCTGCGA+GGG 0.551679 7.2:-3803450 None:intergenic
AGAGTTTGCTAGAGAAATGC+TGG 0.552160 7.2:+3804260 MS.gene29341:CDS
AACATAGATGTCTAAGCTCA+TGG 0.556973 7.2:-3803717 None:intergenic
GATGTACTTAAACTCTATGA+AGG 0.557823 7.2:+3803875 MS.gene29341:CDS
AAAATACCTTTAATCACTTG+AGG 0.559739 7.2:-3804010 None:intergenic
TGATGGTGTTCATGAGTTGG+TGG 0.566353 7.2:+3800564 MS.gene29341:CDS
GGATGCAATAGTTTATGAAT+GGG 0.568425 7.2:-3805212 None:intergenic
TGAATATCCTTACCCTCGCA+GGG 0.570835 7.2:+3803438 MS.gene29341:CDS
TATGTTCGTCCAGTTCTTGG+AGG 0.573994 7.2:+3803409 MS.gene29341:CDS
GACAAAGAGACAGTATGCAT+TGG 0.575350 7.2:+3806177 MS.gene29341:CDS
GCGAGGGTAAGGATATTCAC+TGG 0.577659 7.2:-3803434 None:intergenic
AACCTGTCAAATGCTTCCAA+TGG 0.578726 7.2:-3806215 None:intergenic
TGGAGGCCACGAATTATGAC+AGG 0.579147 7.2:-3804294 None:intergenic
TGGAAGGAATTAATACAAGA+AGG 0.579714 7.2:+3805828 MS.gene29341:CDS
AGCTGGTGAATCAACATACA+AGG 0.580875 7.2:+3802918 MS.gene29341:CDS
TATGTAGCAGTAAACGACTC+TGG 0.581259 7.2:+3805000 MS.gene29341:CDS
ATGTTCGTCCAGTTCTTGGA+GGG 0.581921 7.2:+3803410 MS.gene29341:CDS
TTTGGTTTGCAATCAACACA+TGG 0.583519 7.2:+3805733 MS.gene29341:CDS
GCTTAGACATCTATGTTCCA+AGG 0.583822 7.2:+3803723 MS.gene29341:CDS
AGCTTTAGCCAATTGCCAGA+TGG 0.583869 7.2:-3804977 None:intergenic
AACTCCATGGCATACTTGGA+AGG 0.584001 7.2:-3805320 None:intergenic
AGAATGACCGCATTATGAGA+GGG 0.586537 7.2:+3800482 MS.gene29341:CDS
GTACTTAAACTCTATGAAGG+TGG 0.589447 7.2:+3803878 MS.gene29341:CDS
CTATTAGTTCTTCCCCTGCG+AGG 0.591239 7.2:-3803451 None:intergenic
GCATACTGTCTCTTTGTCCA+AGG 0.591991 7.2:-3806172 None:intergenic
AAGTGGATAACACCTTGGCC+AGG 0.592029 7.2:-3803045 None:intergenic
CACTGATGACATACTTGAGG+AGG 0.601221 7.2:+3804785 MS.gene29341:CDS
AGTATGTCATCAGTGCATCA+TGG 0.602762 7.2:-3804777 None:intergenic
ATGAACACCATCAAGAAATG+AGG 0.605278 7.2:-3800554 None:intergenic
GATGGTGTTCATGAGTTGGT+GGG 0.606734 7.2:+3800565 MS.gene29341:CDS
AAAGATTCAGCATCTCCGTA+TGG 0.607458 7.2:+3805660 MS.gene29341:CDS
AAAGAAATTCTCCGAACTGA+CGG 0.607896 7.2:+3803962 MS.gene29341:CDS
CATTTATATTCATTGTGTCG+CGG 0.613410 7.2:-3805241 None:intergenic
AGTGCTGATAAAGGCGACCC+TGG 0.614536 7.2:+3800613 MS.gene29341:CDS
GTATCCTTCCAAGTATGCCA+TGG 0.615719 7.2:+3805316 MS.gene29341:CDS
AAACTCAATTCAATCGCCAA+TGG 0.618770 7.2:-3804880 None:intergenic
AAAGGCCACCTGCATTGATG+AGG 0.623496 7.2:-3805280 None:intergenic
CTTAGACATCTATGTTCCAA+GGG 0.624979 7.2:+3803724 MS.gene29341:CDS
AGAACTACAATCTTGGTGGA+AGG 0.627815 7.2:+3805812 MS.gene29341:CDS
TTTCTTTGAGCATTTCAGCA+GGG 0.628277 7.2:-3803946 None:intergenic
GATGATGATATAGGAACACC+AGG 0.628865 7.2:+3802955 MS.gene29341:CDS
TGCCAGTAGATCTTGTCAAG+AGG 0.630464 7.2:+3805387 MS.gene29341:CDS
CTAGCCCGTCCACCGCGTAA+GGG 0.632129 7.2:-3805707 None:intergenic
TTTGCTAGAGAAATGCTGGC+TGG 0.633196 7.2:+3804264 MS.gene29341:CDS
CTACAAAGACATATGCCAGT+AGG 0.633532 7.2:+3804821 MS.gene29341:CDS
GCCGAACCTGACTTTGCGGG+TGG 0.634336 7.2:-3803475 None:intergenic
AATCGTCGATTATTAGTCGA+AGG 0.634400 7.2:-3805683 None:intergenic
ATCGACGACTTATTGTTGGA+CGG 0.634825 7.2:-3806001 None:intergenic
CTACTGGCAGTGCTTGTTCG+GGG 0.636016 7.2:-3805373 None:intergenic
ATATAAAGTGGATAACACCT+TGG 0.637121 7.2:-3803050 None:intergenic
AAGCGCTGATGACAACTCCA+TGG 0.638486 7.2:-3805333 None:intergenic
TTGAGTTTGCCACATCCCAA+AGG 0.639675 7.2:+3804895 MS.gene29341:CDS
GCATATCTAGAAGACTGGAA+TGG 0.643520 7.2:+3802877 MS.gene29341:CDS
CAAATCCTCATCAATGCAGG+TGG 0.644745 7.2:+3805275 MS.gene29341:CDS
TTGGTTTGCAATCAACACAT+GGG 0.646873 7.2:+3805734 MS.gene29341:CDS
GAGCAGAGGATAAATCTGCA+TGG 0.652109 7.2:+3804226 MS.gene29341:intron
CATCCCAAAGGAGATCAACA+TGG 0.659295 7.2:+3804907 MS.gene29341:CDS
AGGTGGGATAGAAGTTCCTG+AGG 0.659348 7.2:+3803895 MS.gene29341:CDS
GAATTAATACAAGAAGGTCA+CGG 0.672153 7.2:+3805834 MS.gene29341:CDS
CTACTTCCCCTCTCATAATG+CGG 0.676192 7.2:-3800489 None:intergenic
GGTGGGATAGAAGTTCCTGA+GGG 0.679854 7.2:+3803896 MS.gene29341:CDS
GGATGGACTCACAGTTGACG+AGG 0.680560 7.2:+3804594 MS.gene29341:CDS
GAATGACCGCATTATGAGAG+GGG 0.682880 7.2:+3800483 MS.gene29341:CDS
GATGCAATAGTTTATGAATG+GGG 0.686922 7.2:-3805211 None:intergenic
TTACTACAAGAATGATGACA+CGG 0.698169 7.2:+3805776 MS.gene29341:CDS
CCAACTGAAAGAATGGGACA+GGG 0.698738 7.2:+3803333 MS.gene29341:CDS
AATCGACGATTACCCTTACG+CGG 0.700260 7.2:+3805695 MS.gene29341:CDS
ATGCACTGATGACATACTTG+AGG 0.700359 7.2:+3804782 MS.gene29341:CDS
AACAAGAGTCTGCAATTGTG+CGG 0.716058 7.2:-3806099 None:intergenic
CGACGATTACCCTTACGCGG+TGG 0.719618 7.2:+3805698 MS.gene29341:CDS
GAATATCCTTACCCTCGCAG+GGG 0.721644 7.2:+3803439 MS.gene29341:CDS
ATACTTGGAAGGATACACTG+TGG 0.828622 7.2:-3805309 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATATTAATTTTTTTAA+GGG - chr7.2:3802737-3802756 None:intergenic 0.0%
!!! TATTTATATTAATTTTTTTA+AGG - chr7.2:3802738-3802757 None:intergenic 0.0%
!! AAAATAATAATAATTCACAA+AGG - chr7.2:3805507-3805526 None:intergenic 10.0%
!! AACATGAAATATATAATATA+AGG - chr7.2:3805114-3805133 None:intergenic 10.0%
!!! ATTAATATCATTTTTGTAAA+AGG + chr7.2:3802600-3802619 MS.gene29341:intron 10.0%
!!! TACGATATAAATATATTTTT+TGG + chr7.2:3801690-3801709 MS.gene29341:intron 10.0%
!! AATATAAGGAAAAAAATTAG+TGG - chr7.2:3801249-3801268 None:intergenic 15.0%
!! CATGATAAATAAAATATCTA+AGG + chr7.2:3801394-3801413 MS.gene29341:intron 15.0%
!! TAAACATGATTAATTGTAAA+AGG - chr7.2:3800700-3800719 None:intergenic 15.0%
!! TTTCATAAATATATTAGTGA+TGG - chr7.2:3805445-3805464 None:intergenic 15.0%
!!! ACATAATATTGGTAATTAAA+TGG - chr7.2:3802440-3802459 None:intergenic 15.0%
!!! ACCAATATTATGTAAATTTT+GGG + chr7.2:3802447-3802466 MS.gene29341:intron 15.0%
!!! AGAAAAATACAATTTTCTTT+TGG - chr7.2:3804371-3804390 None:intergenic 15.0%
!!! ATTATGATCATAAATTTTGA+AGG + chr7.2:3802823-3802842 MS.gene29341:intron 15.0%
!!! ATTTGAGGTTTATAATAATT+AGG + chr7.2:3803179-3803198 MS.gene29341:intron 15.0%
!!! CTAATCAAATTTTGAATATA+AGG - chr7.2:3801263-3801282 None:intergenic 15.0%
!!! TACCAATATTATGTAAATTT+TGG + chr7.2:3802446-3802465 MS.gene29341:intron 15.0%
!!! TTTGAGGTTTATAATAATTA+GGG + chr7.2:3803180-3803199 MS.gene29341:intron 15.0%
!!! TTTTTTCTATTCAAAATCAA+AGG - chr7.2:3800940-3800959 None:intergenic 15.0%
!! AAACCATTATTGTATTGTAA+TGG + chr7.2:3804187-3804206 MS.gene29341:intron 20.0%
!! AACAATTTAAAAAAGCAAGT+GGG - chr7.2:3801987-3802006 None:intergenic 20.0%
!! AACATCTATAAAATGACAAT+TGG + chr7.2:3801918-3801937 MS.gene29341:intron 20.0%
!! AAGTTTCAGGAAATAAATTT+GGG - chr7.2:3804415-3804434 None:intergenic 20.0%
!! ACAAAAGAAGTTGTTTATAT+TGG + chr7.2:3804750-3804769 MS.gene29341:CDS 20.0%
!! ACCCAAAATTTACATAATAT+TGG - chr7.2:3802451-3802470 None:intergenic 20.0%
!! ACTACATTTAATGGTTTAAT+CGG - chr7.2:3802409-3802428 None:intergenic 20.0%
!! AGTTCATGATCATAAAAAAA+TGG - chr7.2:3805605-3805624 None:intergenic 20.0%
!! ATAAAATAAACTTATACCAG+TGG - chr7.2:3805044-3805063 None:intergenic 20.0%
!! ATTATGGTATGCAATATAAT+AGG - chr7.2:3804145-3804164 None:intergenic 20.0%
!! CAGTATAGAAAAATTAAGTT+TGG - chr7.2:3802695-3802714 None:intergenic 20.0%
!! GTAATGATTACTACATTTAA+TGG - chr7.2:3802418-3802437 None:intergenic 20.0%
!! TAACAATTTAAAAAAGCAAG+TGG - chr7.2:3801988-3802007 None:intergenic 20.0%
!! TAAGTTTCAGGAAATAAATT+TGG - chr7.2:3804416-3804435 None:intergenic 20.0%
!! TAGAAATTTCTAACCATAAT+AGG - chr7.2:3803629-3803648 None:intergenic 20.0%
!! TCAAAAATACTCATTATAGT+GGG - chr7.2:3800748-3800767 None:intergenic 20.0%
!! TCTAAATTAAATAGTCTAAG+TGG - chr7.2:3800802-3800821 None:intergenic 20.0%
!! TGAAATATCTAAGTCTAAAT+TGG - chr7.2:3802081-3802100 None:intergenic 20.0%
!! TGATCTTTATTATAGTTGAT+AGG - chr7.2:3801018-3801037 None:intergenic 20.0%
!! TGTTCTTATTATTATCATCA+TGG - chr7.2:3800462-3800481 None:intergenic 20.0%
!! TTATGCATACTATAATGATT+TGG + chr7.2:3803363-3803382 MS.gene29341:CDS 20.0%
!! TTCCTGCAATTTAATTAATA+AGG - chr7.2:3804491-3804510 None:intergenic 20.0%
!! TTGAGATTAAAAGACATATT+TGG + chr7.2:3802219-3802238 MS.gene29341:intron 20.0%
!!! AATATGAGCATATCTTTTTT+CGG - chr7.2:3802583-3802602 None:intergenic 20.0%
!!! AATTTTCAGAATACAGAATA+GGG - chr7.2:3801485-3801504 None:intergenic 20.0%
!!! CATCTAATAATTTGTATTTG+AGG + chr7.2:3803164-3803183 MS.gene29341:intron 20.0%
!!! GCATATATTTTCAAATACAA+AGG - chr7.2:3801670-3801689 None:intergenic 20.0%
!!! GTGGTTTAAATTTTGAATAA+TGG - chr7.2:3801230-3801249 None:intergenic 20.0%
!!! GTTATTATAATTTTCTGCAT+AGG + chr7.2:3802004-3802023 MS.gene29341:intron 20.0%
!!! TAAAAGGAGAAATTTTTCTA+GGG - chr7.2:3800684-3800703 None:intergenic 20.0%
!!! TGTTTTCAAAAAAGCTTTAT+CGG - chr7.2:3806075-3806094 None:intergenic 20.0%
!!! TTTATGTTTTGTTAACATTC+CGG + chr7.2:3805525-3805544 MS.gene29341:intron 20.0%
! AAAATACCTTTAATCACTTG+AGG - chr7.2:3804013-3804032 None:intergenic 25.0%
! AAACTTGCACAATCATTATA+TGG + chr7.2:3805913-3805932 MS.gene29341:CDS 25.0%
! AAATGGATCTTTACTTACAA+CGG - chr7.2:3805588-3805607 None:intergenic 25.0%
! AAATTAAATAGTCTAAGTGG+TGG - chr7.2:3800799-3800818 None:intergenic 25.0%
! AATTAATAAGGACAAATGTG+AGG - chr7.2:3804479-3804498 None:intergenic 25.0%
! ACAATTTAAAAAAGCAAGTG+GGG - chr7.2:3801986-3802005 None:intergenic 25.0%
! ACTTATTATAATTGTCCATG+AGG + chr7.2:3801836-3801855 MS.gene29341:intron 25.0%
! AGAAGAAATCAAATCTTCTA+AGG - chr7.2:3801301-3801320 None:intergenic 25.0%
! ATACAAGGTTACATTTGATT+TGG + chr7.2:3802933-3802952 MS.gene29341:CDS 25.0%
! ATGGTTAGAAATTTCTAATG+TGG + chr7.2:3803632-3803651 MS.gene29341:intron 25.0%
! ATTAATAAGGACAAATGTGA+GGG - chr7.2:3804478-3804497 None:intergenic 25.0%
! ATTGATGAAGAAAAATGTGT+TGG + chr7.2:3800513-3800532 MS.gene29341:CDS 25.0%
! CGAGTACATAATTAATAAAC+TGG - chr7.2:3803517-3803536 None:intergenic 25.0%
! GAAGAAATCAAATCTTCTAA+GGG - chr7.2:3801300-3801319 None:intergenic 25.0%
! GTAATTAGTACTATAGTTCA+AGG - chr7.2:3803207-3803226 None:intergenic 25.0%
! GTCAAAAATACTCATTATAG+TGG - chr7.2:3800749-3800768 None:intergenic 25.0%
! GTCCTTATTAATTAAATTGC+AGG + chr7.2:3804486-3804505 MS.gene29341:intron 25.0%
! TATATTAGTGATGGTCTAAT+TGG - chr7.2:3805436-3805455 None:intergenic 25.0%
! TATTTCATGTTGTATATCAC+AGG + chr7.2:3805123-3805142 MS.gene29341:intron 25.0%
! TTATGATCATAATACCATTC+AGG - chr7.2:3802816-3802835 None:intergenic 25.0%
! TTTACTATGAGATGAATCAT+CGG + chr7.2:3800822-3800841 MS.gene29341:intron 25.0%
!! ATTCTTTTTCTGCAACAAAA+TGG + chr7.2:3804847-3804866 MS.gene29341:CDS 25.0%
!! GAAAAATGTGTTGGATTTTA+AGG + chr7.2:3800522-3800541 MS.gene29341:CDS 25.0%
!! GAATTTTCAGAATACAGAAT+AGG - chr7.2:3801486-3801505 None:intergenic 25.0%
!! GTAAAAGGAGAAATTTTTCT+AGG - chr7.2:3800685-3800704 None:intergenic 25.0%
!! TAGAGATTGCATTTAAAACA+GGG - chr7.2:3802104-3802123 None:intergenic 25.0%
!! TTAGAGATTGCATTTAAAAC+AGG - chr7.2:3802105-3802124 None:intergenic 25.0%
!! TTCTTTTTCTGCAACAAAAT+GGG + chr7.2:3804848-3804867 MS.gene29341:CDS 25.0%
!! TTTTGGCAAAATTACTTCTA+TGG + chr7.2:3805068-3805087 MS.gene29341:intron 25.0%
!!! ATCATAAATTTTGAAGGCAA+TGG + chr7.2:3802829-3802848 MS.gene29341:intron 25.0%
!!! CCTTTTGATATTTTTGAGAA+GGG - chr7.2:3803092-3803111 None:intergenic 25.0%
!!! CTTTCTGAAGTAAACTATAA+TGG - chr7.2:3803580-3803599 None:intergenic 25.0%
!!! GTTTTCAAAAAAGCTTTATC+GGG - chr7.2:3806074-3806093 None:intergenic 25.0%
!!! TCCTTTTGATATTTTTGAGA+AGG - chr7.2:3803093-3803112 None:intergenic 25.0%
!!! TTTCTTTTAGAAAATAGCCA+AGG + chr7.2:3801786-3801805 MS.gene29341:intron 25.0%
!!! TTTGATTTGGATGATGATAT+AGG + chr7.2:3802946-3802965 MS.gene29341:CDS 25.0%
!!! TTTTTCTAGGGAAAAAAAGA+AGG - chr7.2:3800672-3800691 None:intergenic 25.0%
AATTTCTAACCATAATAGGC+AGG - chr7.2:3803625-3803644 None:intergenic 30.0%
ACTCTCAATTTAATCTCTGA+AGG - chr7.2:3802310-3802329 None:intergenic 30.0%
AGGATGCAATAGTTTATGAA+TGG - chr7.2:3805216-3805235 None:intergenic 30.0%
ATATAAAGTGGATAACACCT+TGG - chr7.2:3803053-3803072 None:intergenic 30.0%
CATTTATATTCATTGTGTCG+CGG - chr7.2:3805244-3805263 None:intergenic 30.0%
CCCTTCTCAAAAATATCAAA+AGG + chr7.2:3803089-3803108 MS.gene29341:CDS 30.0%
CTCACTAGTCAAATAAATCA+TGG + chr7.2:3804441-3804460 MS.gene29341:intron 30.0%
CTGTTTGCAGATATAATGAA+TGG - chr7.2:3805173-3805192 None:intergenic 30.0%
GAAGAACTTGAAACTTTAAG+AGG + chr7.2:3803295-3803314 MS.gene29341:CDS 30.0%
GAATTAATACAAGAAGGTCA+CGG + chr7.2:3805834-3805853 MS.gene29341:CDS 30.0%
GACAATGCATAAAATATGCA+AGG + chr7.2:3802532-3802551 MS.gene29341:intron 30.0%
GATGCAATAGTTTATGAATG+GGG - chr7.2:3805214-3805233 None:intergenic 30.0%
GATGTACTTAAACTCTATGA+AGG + chr7.2:3803875-3803894 MS.gene29341:CDS 30.0%
GGATGCAATAGTTTATGAAT+GGG - chr7.2:3805215-3805234 None:intergenic 30.0%
GTCATCATTCTTGTAGTAAA+AGG - chr7.2:3805775-3805794 None:intergenic 30.0%
TAAATAAAATTGCATCCCTG+TGG + chr7.2:3802156-3802175 MS.gene29341:intron 30.0%
TAATAAACTGGTGATCATTG+TGG - chr7.2:3803505-3803524 None:intergenic 30.0%
TACTTAAACTCTATGAAGGT+GGG + chr7.2:3803879-3803898 MS.gene29341:CDS 30.0%
TATTATCATCATGGATGCTA+AGG - chr7.2:3800453-3800472 None:intergenic 30.0%
TCAAAGCTATCAAACTCATT+AGG - chr7.2:3803854-3803873 None:intergenic 30.0%
TCTTCTCTATACTTAAGAAG+TGG - chr7.2:3803277-3803296 None:intergenic 30.0%
TGGAAGGAATTAATACAAGA+AGG + chr7.2:3805828-3805847 MS.gene29341:CDS 30.0%
TTAATAAGGACAAATGTGAG+GGG - chr7.2:3804477-3804496 None:intergenic 30.0%
TTACTACAAGAATGATGACA+CGG + chr7.2:3805776-3805795 MS.gene29341:CDS 30.0%
TTCTTAATTAGAAATGCTCC+TGG - chr7.2:3802976-3802995 None:intergenic 30.0%
! ATTCAACGAGTTCTTCTTTT+AGG + chr7.2:3801502-3801521 MS.gene29341:intron 30.0%
! GAGCTTAGTAATCTAGAATT+TGG + chr7.2:3805562-3805581 MS.gene29341:intron 30.0%
! GGAATTTTCAACACCATTTT+CGG - chr7.2:3804959-3804978 None:intergenic 30.0%
! GTGCCATTACAATACAATAA+TGG - chr7.2:3804193-3804212 None:intergenic 30.0%
! TGCATACTATAATGATTTGG+CGG + chr7.2:3803366-3803385 MS.gene29341:CDS 30.0%
! TGCATGACTTTTCTTGATTA+TGG - chr7.2:3804161-3804180 None:intergenic 30.0%
! TTTTCTTTCCTAACCCATAT+TGG - chr7.2:3801581-3801600 None:intergenic 30.0%
!! AAAGTGTATGGCATTTTAAC+AGG - chr7.2:3806317-3806336 None:intergenic 30.0%
!! ATACTCATTATAGTGGGTTA+TGG - chr7.2:3800742-3800761 None:intergenic 30.0%
!! TCAAATAGTGATTCTAGTTC+AGG - chr7.2:3803824-3803843 None:intergenic 30.0%
AAACTCAATTCAATCGCCAA+TGG - chr7.2:3804883-3804902 None:intergenic 35.0%
AAAGAAATTCTCCGAACTGA+CGG + chr7.2:3803962-3803981 MS.gene29341:CDS 35.0%
AAATATGTTCGTCCAGTTCT+TGG + chr7.2:3803406-3803425 MS.gene29341:CDS 35.0%
AACATAGATGTCTAAGCTCA+TGG - chr7.2:3803720-3803739 None:intergenic 35.0%
AAGATGCAGAACTACAATCT+TGG + chr7.2:3805805-3805824 MS.gene29341:CDS 35.0%
AAGCTAGATCCTAAAGTCTA+CGG + chr7.2:3804526-3804545 MS.gene29341:CDS 35.0%
AAGGAAAACTTGAGTGCTAA+GGG - chr7.2:3805095-3805114 None:intergenic 35.0%
AATGGCATGAAAGGAAAAGT+TGG + chr7.2:3802847-3802866 MS.gene29341:CDS 35.0%
ACAATTAGTCCTGCCTATTA+TGG + chr7.2:3803613-3803632 MS.gene29341:intron 35.0%
ACATATTTCGGACCTTTATC+AGG - chr7.2:3803394-3803413 None:intergenic 35.0%
ACATGTTCGTTATGAAGTGT+TGG + chr7.2:3804102-3804121 MS.gene29341:intron 35.0%
ACCCTAAATAATAGATGTCC+TGG + chr7.2:3800767-3800786 MS.gene29341:intron 35.0%
AGAACTGGACGAACATATTT+CGG - chr7.2:3803406-3803425 None:intergenic 35.0%
AGCTCCTTTATCTTAGAAAC+CGG - chr7.2:3805547-3805566 None:intergenic 35.0%
AGGAGAAAGAACAAAGTATG+AGG - chr7.2:3800652-3800671 None:intergenic 35.0%
AGGCGTGTAAACATTACTAA+TGG - chr7.2:3804935-3804954 None:intergenic 35.0%
AGGGTGCAGTTAAAAGAATT+AGG + chr7.2:3803915-3803934 MS.gene29341:CDS 35.0%
ATAGCATCCAACTGAAAGAA+TGG + chr7.2:3803326-3803345 MS.gene29341:CDS 35.0%
ATCATGAACTGATACGTTGT+TGG + chr7.2:3805615-3805634 MS.gene29341:intron 35.0%
ATGAACACCATCAAGAAATG+AGG - chr7.2:3800557-3800576 None:intergenic 35.0%
ATGAATCGACGACTTATTGT+TGG - chr7.2:3806008-3806027 None:intergenic 35.0%
ATGGCATGAAAGGAAAAGTT+GGG + chr7.2:3802848-3802867 MS.gene29341:CDS 35.0%
ATTATTAGTCGAAGGCCATA+CGG - chr7.2:3805678-3805697 None:intergenic 35.0%
ATTTCTTTGAGCATTTCAGC+AGG - chr7.2:3803950-3803969 None:intergenic 35.0%
CAGAAAAAGAATTGTCCTAC+TGG - chr7.2:3804839-3804858 None:intergenic 35.0%
CCACTTTATATGCAACTCTT+GGG + chr7.2:3803062-3803081 MS.gene29341:CDS 35.0%
CCCAGGACATCTATTATTTA+GGG - chr7.2:3800771-3800790 None:intergenic 35.0%
CCCTAAATAATAGATGTCCT+GGG + chr7.2:3800768-3800787 MS.gene29341:intron 35.0%
CCTAAATAATAGATGTCCTG+GGG + chr7.2:3800769-3800788 MS.gene29341:intron 35.0%
CTAGGATAAAGCAAAGTGTA+TGG - chr7.2:3806329-3806348 None:intergenic 35.0%
CTTAGACATCTATGTTCCAA+GGG + chr7.2:3803724-3803743 MS.gene29341:CDS 35.0%
CTTCATAACGAACATGTATC+CGG - chr7.2:3804099-3804118 None:intergenic 35.0%
CTTTATCAGCACTTACAAGT+TGG - chr7.2:3800606-3800625 None:intergenic 35.0%
CTTTATCCTAGAAGTGAAAG+TGG + chr7.2:3806338-3806357 MS.gene29341:CDS 35.0%
GACTAAGGTGAAACCAATAT+GGG + chr7.2:3801565-3801584 MS.gene29341:intron 35.0%
GAGGATGAAAATACTAACCA+GGG - chr7.2:3800633-3800652 None:intergenic 35.0%
GGGTGCAGTTAAAAGAATTA+GGG + chr7.2:3803916-3803935 MS.gene29341:CDS 35.0%
GTAAATCCTGTCATAATTCG+TGG + chr7.2:3804288-3804307 MS.gene29341:CDS 35.0%
GTACTTAAACTCTATGAAGG+TGG + chr7.2:3803878-3803897 MS.gene29341:CDS 35.0%
GTGAATCTCAAAAATCGAGT+TGG + chr7.2:3806290-3806309 MS.gene29341:CDS 35.0%
TAAGGAAAACTTGAGTGCTA+AGG - chr7.2:3805096-3805115 None:intergenic 35.0%
TACCATATGTTAAGCCTGAA+TGG + chr7.2:3802799-3802818 MS.gene29341:intron 35.0%
TACCATTCAGGCTTAACATA+TGG - chr7.2:3802804-3802823 None:intergenic 35.0%
TACTCTATAGTTCCTTTCTC+AGG - chr7.2:3806032-3806051 None:intergenic 35.0%
TAGCATCCAACTGAAAGAAT+GGG + chr7.2:3803327-3803346 MS.gene29341:CDS 35.0%
TAGTGAGTCTCTTAAGTTTC+AGG - chr7.2:3804428-3804447 None:intergenic 35.0%
TCCACTTTATATGCAACTCT+TGG + chr7.2:3803061-3803080 MS.gene29341:CDS 35.0%
TCTACAACAACTTAACCACA+GGG - chr7.2:3802174-3802193 None:intergenic 35.0%
TCTTTCACTGTTTGCATCTT+TGG - chr7.2:3805885-3805904 None:intergenic 35.0%
TGAAAATTCCATCTGGCAAT+TGG + chr7.2:3804969-3804988 MS.gene29341:CDS 35.0%
TGACTAAGGTGAAACCAATA+TGG + chr7.2:3801564-3801583 MS.gene29341:intron 35.0%
TGAGGATGAAAATACTAACC+AGG - chr7.2:3800634-3800653 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG + chr7.2:3802537-3802556 MS.gene29341:intron 35.0%
TTCAGAATACAGAATAGGGT+GGG - chr7.2:3801481-3801500 None:intergenic 35.0%
TTTCAGAATACAGAATAGGG+TGG - chr7.2:3801482-3801501 None:intergenic 35.0%
TTTCTTTGAGCATTTCAGCA+GGG - chr7.2:3803949-3803968 None:intergenic 35.0%
! AATCGTCGATTATTAGTCGA+AGG - chr7.2:3805686-3805705 None:intergenic 35.0%
! ATGGTGTTGAAAATTCCATC+TGG + chr7.2:3804962-3804981 MS.gene29341:CDS 35.0%
! CTCTTAATGATTTTGAGCAG+AGG + chr7.2:3804212-3804231 MS.gene29341:intron 35.0%
! GTTGATTCACCAGCTATTAA+GGG - chr7.2:3802913-3802932 None:intergenic 35.0%
! TACGTTGTTGGTTATTTCAG+AGG + chr7.2:3805627-3805646 MS.gene29341:intron 35.0%
! TGTTGGTTATTTCAGAGGAA+TGG + chr7.2:3805632-3805651 MS.gene29341:intron 35.0%
! TTAGGATCTAGCTTAGATGT+TGG - chr7.2:3804520-3804539 None:intergenic 35.0%
! TTTCAAGGGTCAAGCTTTTT+AGG - chr7.2:3803020-3803039 None:intergenic 35.0%
! TTTGGACAATATCCTTTTGC+AGG + chr7.2:3805966-3805985 MS.gene29341:CDS 35.0%
!! CAACTTGTAAGTGCTGATAA+AGG + chr7.2:3800604-3800623 MS.gene29341:CDS 35.0%
!! CATTCCGGTTTCTAAGATAA+AGG + chr7.2:3805540-3805559 MS.gene29341:intron 35.0%
!! TATAGGGTATTGAAGCGTAT+TGG - chr7.2:3801450-3801469 None:intergenic 35.0%
!! TGTTGATTCACCAGCTATTA+AGG - chr7.2:3802914-3802933 None:intergenic 35.0%
!! TTGGTTTGCAATCAACACAT+GGG + chr7.2:3805734-3805753 MS.gene29341:CDS 35.0%
!! TTTGGTTTGCAATCAACACA+TGG + chr7.2:3805733-3805752 MS.gene29341:CDS 35.0%
!!! TATCTTTTTTCGGTAGTGAC+CGG - chr7.2:3802573-3802592 None:intergenic 35.0%
AAAGATTCAGCATCTCCGTA+TGG + chr7.2:3805660-3805679 MS.gene29341:CDS 40.0%
AACAAGAGTCTGCAATTGTG+CGG - chr7.2:3806102-3806121 None:intergenic 40.0%
AACCTGTCAAATGCTTCCAA+TGG - chr7.2:3806218-3806237 None:intergenic 40.0%
AAGAATGACCGCATTATGAG+AGG + chr7.2:3800481-3800500 MS.gene29341:CDS 40.0%
ACAATCACACCCTTAATAGC+TGG + chr7.2:3802901-3802920 MS.gene29341:CDS 40.0%
AGAACTACAATCTTGGTGGA+AGG + chr7.2:3805812-3805831 MS.gene29341:CDS 40.0%
AGAATGACCGCATTATGAGA+GGG + chr7.2:3800482-3800501 MS.gene29341:CDS 40.0%
AGCTGGTGAATCAACATACA+AGG + chr7.2:3802918-3802937 MS.gene29341:CDS 40.0%
AGGTGAAACCAATATGGGTT+AGG + chr7.2:3801570-3801589 MS.gene29341:intron 40.0%
AGTATGTCATCAGTGCATCA+TGG - chr7.2:3804780-3804799 None:intergenic 40.0%
ATACTTGGAAGGATACACTG+TGG - chr7.2:3805312-3805331 None:intergenic 40.0%
ATCGACGACTTATTGTTGGA+CGG - chr7.2:3806004-3806023 None:intergenic 40.0%
ATGCAGAACTACAATCTTGG+TGG + chr7.2:3805808-3805827 MS.gene29341:CDS 40.0%
CATAAAATATGCAAGGTCCG+GGG + chr7.2:3802539-3802558 MS.gene29341:intron 40.0%
CATCAGCGCTTTATAAGGAT+TGG + chr7.2:3805345-3805364 MS.gene29341:CDS 40.0%
CCCAAGAGTTGCATATAAAG+TGG - chr7.2:3803065-3803084 None:intergenic 40.0%
CCCCAGGACATCTATTATTT+AGG - chr7.2:3800772-3800791 None:intergenic 40.0%
CTACAAAGACATATGCCAGT+AGG + chr7.2:3804821-3804840 MS.gene29341:CDS 40.0%
CTACATGCAGCTGTAAACTT+TGG + chr7.2:3805948-3805967 MS.gene29341:CDS 40.0%
CTACTCTCACTATTAGCATC+TGG - chr7.2:3803686-3803705 None:intergenic 40.0%
CTATACTTAAGAAGTGGAGC+TGG - chr7.2:3803271-3803290 None:intergenic 40.0%
GACAAAGAGACAGTATGCAT+TGG + chr7.2:3806177-3806196 MS.gene29341:CDS 40.0%
GATGATGATATAGGAACACC+AGG + chr7.2:3802955-3802974 MS.gene29341:CDS 40.0%
GCAAACAGTGAAAGAGTTGA+CGG + chr7.2:3805890-3805909 MS.gene29341:CDS 40.0%
GCATAAAATATGCAAGGTCC+GGG + chr7.2:3802538-3802557 MS.gene29341:intron 40.0%
GCATATCTAGAAGACTGGAA+TGG + chr7.2:3802877-3802896 MS.gene29341:CDS 40.0%
GCGATCAATCTAGCACAATA+AGG + chr7.2:3804548-3804567 MS.gene29341:CDS 40.0%
GCTCAAATCAAGTATCCAAG+TGG - chr7.2:3800856-3800875 None:intergenic 40.0%
GCTCACAAGAACTTTCATCA+AGG - chr7.2:3802495-3802514 None:intergenic 40.0%
GCTTAGACATCTATGTTCCA+AGG + chr7.2:3803723-3803742 MS.gene29341:CDS 40.0%
GGCATATGTCTTTGTAGAAG+TGG - chr7.2:3804818-3804837 None:intergenic 40.0%
GTCTACAACAACTTAACCAC+AGG - chr7.2:3802175-3802194 None:intergenic 40.0%
GTCTACACATTCTTCTGATG+AGG + chr7.2:3806145-3806164 MS.gene29341:CDS 40.0%
GTTGTCATCAGCGCTTTATA+AGG + chr7.2:3805340-3805359 MS.gene29341:CDS 40.0%
TACCTCTTGACAAGATCTAC+TGG - chr7.2:3805392-3805411 None:intergenic 40.0%
TATGTAGCAGTAAACGACTC+TGG + chr7.2:3805000-3805019 MS.gene29341:CDS 40.0%
TCAGAATACAGAATAGGGTG+GGG - chr7.2:3801480-3801499 None:intergenic 40.0%
TCTTGTGAGCTTATCTCAGT+TGG + chr7.2:3802505-3802524 MS.gene29341:intron 40.0%
TGAGCTTATCTCAGTTGGTT+AGG + chr7.2:3802510-3802529 MS.gene29341:intron 40.0%
TGAGTCATGAGTCATGACTA+AGG + chr7.2:3801550-3801569 MS.gene29341:intron 40.0%
TTAGGCTGGGAGGTTAATTA+AGG + chr7.2:3801520-3801539 MS.gene29341:intron 40.0%
TTCCAGTCTTCTAGATATGC+AGG - chr7.2:3802877-3802896 None:intergenic 40.0%
TTGACCCTTGAAAATGTTCC+TGG + chr7.2:3803027-3803046 MS.gene29341:CDS 40.0%
TTGAGTGCCTCATTTCTTGA+TGG + chr7.2:3800547-3800566 MS.gene29341:CDS 40.0%
TTTGAAGGCAATGGCATGAA+AGG + chr7.2:3802838-3802857 MS.gene29341:intron 40.0%
! AACGAGTTCTTCTTTTAGGC+TGG + chr7.2:3801506-3801525 MS.gene29341:intron 40.0%
! ACGAGTTCTTCTTTTAGGCT+GGG + chr7.2:3801507-3801526 MS.gene29341:intron 40.0%
! ACTTGCAAGTTAGAAGTGCA+TGG + chr7.2:3801359-3801378 MS.gene29341:intron 40.0%
! AGTTAGAAGTGCATGGGAAT+TGG + chr7.2:3801366-3801385 MS.gene29341:intron 40.0%
! ATGCACTGATGACATACTTG+AGG + chr7.2:3804782-3804801 MS.gene29341:CDS 40.0%
! CTTGAAACTTTAAGAGGCTC+TGG + chr7.2:3803301-3803320 MS.gene29341:CDS 40.0%
! CTTGCAAGTTAGAAGTGCAT+GGG + chr7.2:3801360-3801379 MS.gene29341:intron 40.0%
! GTTAGAAGTGCATGGGAATT+GGG + chr7.2:3801367-3801386 MS.gene29341:intron 40.0%
! TCGCATTTTCTTCAGCAACA+AGG + chr7.2:3803113-3803132 MS.gene29341:CDS 40.0%
! TTGGCCAGGAACATTTTCAA+GGG - chr7.2:3803034-3803053 None:intergenic 40.0%
! TTTTCAACACCATTTTCGGC+AGG - chr7.2:3804955-3804974 None:intergenic 40.0%
!! AAATGGGACTTTGAAGCCAT+TGG + chr7.2:3804864-3804883 MS.gene29341:CDS 40.0%
!! AGAGTTTGCTAGAGAAATGC+TGG + chr7.2:3804260-3804279 MS.gene29341:CDS 40.0%
!! ATTCTTTTAACTGCACCCTC+AGG - chr7.2:3803914-3803933 None:intergenic 40.0%
!! CTAATTGGTCTTTGACTGTG+TGG - chr7.2:3805421-3805440 None:intergenic 40.0%
!! CTTGTTGAGTTGATACCTCA+TGG - chr7.2:3801854-3801873 None:intergenic 40.0%
!! GGTATTGAAGCGTATTGGTT+GGG - chr7.2:3801445-3801464 None:intergenic 40.0%
!! GTATTGAAGCGTATTGGTTG+GGG - chr7.2:3801444-3801463 None:intergenic 40.0%
!! TCATGAGTTGGTGGGAAAAA+GGG + chr7.2:3800573-3800592 MS.gene29341:CDS 40.0%
!! TCTTGATGGTGTTCATGAGT+TGG + chr7.2:3800561-3800580 MS.gene29341:CDS 40.0%
!! TTCATGAGTTGGTGGGAAAA+AGG + chr7.2:3800572-3800591 MS.gene29341:CDS 40.0%
!! TTGGAAGCATTTGACAGGTT+TGG + chr7.2:3806218-3806237 MS.gene29341:CDS 40.0%
!!! ATCTTTTTTCGGTAGTGACC+GGG - chr7.2:3802572-3802591 None:intergenic 40.0%
AAAAGCCGAACCTGACTTTG+CGG - chr7.2:3803482-3803501 None:intergenic 45.0%
AACTCCATGGCATACTTGGA+AGG - chr7.2:3805323-3805342 None:intergenic 45.0%
AATCGACGATTACCCTTACG+CGG + chr7.2:3805695-3805714 MS.gene29341:CDS 45.0%
ACAAGAAAAACGAGCCTTGG+TGG + chr7.2:3805859-3805878 MS.gene29341:CDS 45.0%
AGAAGTGAAAGTGGCCTAAC+TGG + chr7.2:3806347-3806366 MS.gene29341:CDS 45.0%
AGCCTGCATATCTAGAAGAC+TGG + chr7.2:3802872-3802891 MS.gene29341:CDS 45.0%
ATCAGATATTGAGAGCAGCC+TGG + chr7.2:3804573-3804592 MS.gene29341:CDS 45.0%
ATCATCAGCTTATCAGCCAC+TGG + chr7.2:3805025-3805044 MS.gene29341:CDS 45.0%
ATCTACTGGCAGTGCTTGTT+CGG - chr7.2:3805378-3805397 None:intergenic 45.0%
ATGTTCGTCCAGTTCTTGGA+GGG + chr7.2:3803410-3803429 MS.gene29341:CDS 45.0%
CAAATCCTCATCAATGCAGG+TGG + chr7.2:3805275-3805294 MS.gene29341:CDS 45.0%
CACTGATGACATACTTGAGG+AGG + chr7.2:3804785-3804804 MS.gene29341:CDS 45.0%
CATCCCAAAGGAGATCAACA+TGG + chr7.2:3804907-3804926 MS.gene29341:CDS 45.0%
CCAACTGAAAGAATGGGACA+GGG + chr7.2:3803333-3803352 MS.gene29341:CDS 45.0%
CCTGTGCCTCAAGTGATTAA+AGG + chr7.2:3804004-3804023 MS.gene29341:CDS 45.0%
CCTTTAATCACTTGAGGCAC+AGG - chr7.2:3804007-3804026 None:intergenic 45.0%
CGACAAATCCTCATCAATGC+AGG + chr7.2:3805272-3805291 MS.gene29341:CDS 45.0%
CGACTTATTGTTGGACGGTT+CGG - chr7.2:3805999-3806018 None:intergenic 45.0%
CTACTTCCCCTCTCATAATG+CGG - chr7.2:3800492-3800511 None:intergenic 45.0%
CTTGAAAATGTTCCTGGCCA+AGG + chr7.2:3803033-3803052 MS.gene29341:CDS 45.0%
CTTGAGGCACAGGATATTTG+AGG - chr7.2:3803997-3804016 None:intergenic 45.0%
CTTTACTCTAGCTAGAGCCT+TGG - chr7.2:3801806-3801825 None:intergenic 45.0%
GAATGACCGCATTATGAGAG+GGG + chr7.2:3800483-3800502 MS.gene29341:CDS 45.0%
GAGCAGAGGATAAATCTGCA+TGG + chr7.2:3804226-3804245 MS.gene29341:intron 45.0%
GATACACTGTGGCCTCTAAA+AGG - chr7.2:3805301-3805320 None:intergenic 45.0%
GATTGATCGCCGTAGACTTT+AGG - chr7.2:3804538-3804557 None:intergenic 45.0%
GCACAATTGCAGACTCTTGT+TGG + chr7.2:3806101-3806120 MS.gene29341:CDS 45.0%
GCACCATGTTGATCTCCTTT+GGG - chr7.2:3804913-3804932 None:intergenic 45.0%
GCATACTGTCTCTTTGTCCA+AGG - chr7.2:3806175-3806194 None:intergenic 45.0%
GTATCCTTCCAAGTATGCCA+TGG + chr7.2:3805316-3805335 MS.gene29341:CDS 45.0%
GTTCCAAGGGACGAAAGATT+TGG + chr7.2:3803737-3803756 MS.gene29341:CDS 45.0%
TAAACTCCGCAAGGCTTACT+TGG - chr7.2:3804317-3804336 None:intergenic 45.0%
TATGTTCGTCCAGTTCTTGG+AGG + chr7.2:3803409-3803428 MS.gene29341:CDS 45.0%
TCATCGGATCAACAACCACT+TGG + chr7.2:3800838-3800857 MS.gene29341:intron 45.0%
TCCAACTGAAAGAATGGGAC+AGG + chr7.2:3803332-3803351 MS.gene29341:CDS 45.0%
TCTTCTGATGAGGTCTACCT+TGG + chr7.2:3806155-3806174 MS.gene29341:CDS 45.0%
TGAATATCCTTACCCTCGCA+GGG + chr7.2:3803438-3803457 MS.gene29341:CDS 45.0%
TGACAACTCCATGGCATACT+TGG - chr7.2:3805327-3805346 None:intergenic 45.0%
TGACCAAATCTTTCGTCCCT+TGG - chr7.2:3803743-3803762 None:intergenic 45.0%
TGCAATCAACACATGGGTTC+AGG + chr7.2:3805740-3805759 MS.gene29341:CDS 45.0%
TGCCAGTAGATCTTGTCAAG+AGG + chr7.2:3805387-3805406 MS.gene29341:CDS 45.0%
TGTGATAGCTAAACTCCGCA+AGG - chr7.2:3804326-3804345 None:intergenic 45.0%
TTCATTGTGTCGCGGAAATG+AGG - chr7.2:3805236-3805255 None:intergenic 45.0%
TTCGGTGAGTAACCTGCAAA+AGG - chr7.2:3805981-3806000 None:intergenic 45.0%
TTGAGTTTGCCACATCCCAA+AGG + chr7.2:3804895-3804914 MS.gene29341:CDS 45.0%
TTTGCTAGAGAAATGCTGGC+TGG + chr7.2:3804264-3804283 MS.gene29341:CDS 45.0%
! AGCTTTAGCCAATTGCCAGA+TGG - chr7.2:3804980-3804999 None:intergenic 45.0%
! AGTTCTTCTTTTAGGCTGGG+AGG + chr7.2:3801510-3801529 MS.gene29341:intron 45.0%
! CTTGGCCAGGAACATTTTCA+AGG - chr7.2:3803035-3803054 None:intergenic 45.0%
! GATTTGGCGGATCCTGATAA+AGG + chr7.2:3803379-3803398 MS.gene29341:CDS 45.0%
! GGATCTAGCTTAGATGTTGG+TGG - chr7.2:3804517-3804536 None:intergenic 45.0%
! GTTAGGCCACTTTCACTTCT+AGG - chr7.2:3806347-3806366 None:intergenic 45.0%
! TATTAGTTCTTCCCCTGCGA+GGG - chr7.2:3803453-3803472 None:intergenic 45.0%
! TGATGGTGTTCATGAGTTGG+TGG + chr7.2:3800564-3800583 MS.gene29341:CDS 45.0%
!! AGCCATTGGAAGCATTTGAC+AGG + chr7.2:3806213-3806232 MS.gene29341:CDS 45.0%
!! GATGGTGTTCATGAGTTGGT+GGG + chr7.2:3800565-3800584 MS.gene29341:CDS 45.0%
!! GGGTATTGAAGCGTATTGGT+TGG - chr7.2:3801446-3801465 None:intergenic 45.0%
!! TGTTGATCTCCTTTGGGATG+TGG - chr7.2:3804907-3804926 None:intergenic 45.0%
!!! TCTTTTTTCGGTAGTGACCG+GGG - chr7.2:3802571-3802590 None:intergenic 45.0%
!! TAATATATTTATGAAATATT+TGG + chr7.2:3805449-3805468 MS.gene29341:intron 5.0%
!!! AAGTTTATTTTATTTTATTT+TGG + chr7.2:3805051-3805070 MS.gene29341:intron 5.0%
AAAGCCGAACCTGACTTTGC+GGG - chr7.2:3803481-3803500 None:intergenic 50.0%
AAGTGGATAACACCTTGGCC+AGG - chr7.2:3803048-3803067 None:intergenic 50.0%
AATAGACCACCCGCAAAGTC+AGG + chr7.2:3803469-3803488 MS.gene29341:CDS 50.0%
AGGTGGGATAGAAGTTCCTG+AGG + chr7.2:3803895-3803914 MS.gene29341:CDS 50.0%
CAGCAACATGTGTCAGACAC+CGG + chr7.2:3804077-3804096 MS.gene29341:intron 50.0%
CCCTGTCCCATTCTTTCAGT+TGG - chr7.2:3803336-3803355 None:intergenic 50.0%
GAATATCCTTACCCTCGCAG+GGG + chr7.2:3803439-3803458 MS.gene29341:CDS 50.0%
GACATGTGATGCAGAGCCAT+TGG + chr7.2:3806199-3806218 MS.gene29341:CDS 50.0%
GATATTGAGAGCAGCCTGGA+TGG + chr7.2:3804577-3804596 MS.gene29341:CDS 50.0%
GCGACAAGAAAAACGAGCCT+TGG + chr7.2:3805856-3805875 MS.gene29341:CDS 50.0%
GCGAGGGTAAGGATATTCAC+TGG - chr7.2:3803437-3803456 None:intergenic 50.0%
GGCACCATGTTGATCTCCTT+TGG - chr7.2:3804914-3804933 None:intergenic 50.0%
GGTGGGATAGAAGTTCCTGA+GGG + chr7.2:3803896-3803915 MS.gene29341:CDS 50.0%
GTGAATATCCTTACCCTCGC+AGG + chr7.2:3803437-3803456 MS.gene29341:CDS 50.0%
GTTTACACGCCTGCCGAAAA+TGG + chr7.2:3804943-3804962 MS.gene29341:CDS 50.0%
GTTTGCATCTTTGGCCACCA+AGG - chr7.2:3805876-3805895 None:intergenic 50.0%
TCTACTGGCAGTGCTTGTTC+GGG - chr7.2:3805377-3805396 None:intergenic 50.0%
TGGAGGCCACGAATTATGAC+AGG - chr7.2:3804297-3804316 None:intergenic 50.0%
! AAAGGCCACCTGCATTGATG+AGG - chr7.2:3805283-3805302 None:intergenic 50.0%
! AGAAGTGCATGGGAATTGGG+AGG + chr7.2:3801370-3801389 MS.gene29341:intron 50.0%
! CAATGCAGGTGGCCTTTTAG+AGG + chr7.2:3805286-3805305 MS.gene29341:CDS 50.0%
! CTATTAGTTCTTCCCCTGCG+AGG - chr7.2:3803454-3803473 None:intergenic 50.0%
! GGAGCTTTTGACCGTCAGTT+CGG - chr7.2:3803976-3803995 None:intergenic 50.0%
!! AAGCGCTGATGACAACTCCA+TGG - chr7.2:3805336-3805355 None:intergenic 50.0%
!! CGTCGATTCATGCCTGAGAA+AGG + chr7.2:3806017-3806036 MS.gene29341:CDS 50.0%
!! TGAAGCGTATTGGTTGGGGT+AGG - chr7.2:3801440-3801459 None:intergenic 50.0%
ACCACCCGCAAAGTCAGGTT+CGG + chr7.2:3803474-3803493 MS.gene29341:intron 55.0%
ACTCCGCAAGGCTTACTTGG+AGG - chr7.2:3804314-3804333 None:intergenic 55.0%
AGGGTGGGGCTGCGAATATA+GGG - chr7.2:3801466-3801485 None:intergenic 55.0%
ATTACCCTTACGCGGTGGAC+GGG + chr7.2:3805703-3805722 MS.gene29341:CDS 55.0%
CGTCAACTGTGAGTCCATCC+AGG - chr7.2:3804594-3804613 None:intergenic 55.0%
CTACTGGCAGTGCTTGTTCG+GGG - chr7.2:3805376-3805395 None:intergenic 55.0%
GAAAGTGGCCTAACTGGTGC+AGG + chr7.2:3806353-3806372 MS.gene29341:CDS 55.0%
GATTACCCTTACGCGGTGGA+CGG + chr7.2:3805702-3805721 MS.gene29341:CDS 55.0%
TAGGGTGGGGCTGCGAATAT+AGG - chr7.2:3801467-3801486 None:intergenic 55.0%
TCACTGGACCCTCCAAGAAC+TGG - chr7.2:3803421-3803440 None:intergenic 55.0%
TGGCCTCCAAGTAAGCCTTG+CGG + chr7.2:3804308-3804327 MS.gene29341:intron 55.0%
TGGGAATGCCTGCACCAGTT+AGG - chr7.2:3806364-3806383 None:intergenic 55.0%
! GGATGGACTCACAGTTGACG+AGG + chr7.2:3804594-3804613 MS.gene29341:CDS 55.0%
! TCTAAGTGGTGGAATGCCCC+AGG - chr7.2:3800788-3800807 None:intergenic 55.0%
!! AGTGCTGATAAAGGCGACCC+TGG + chr7.2:3800613-3800632 MS.gene29341:CDS 55.0%
AAGGTCCGGGGTTCAAACCC+CGG + chr7.2:3802551-3802570 MS.gene29341:intron 60.0%
ACTTCGATCCGTGCGTCGCA+CGG + chr7.2:3800990-3801009 MS.gene29341:intron 60.0%
AGTGACCGGGGTTTGAACCC+CGG - chr7.2:3802559-3802578 None:intergenic 60.0%
CGACGATTACCCTTACGCGG+TGG + chr7.2:3805698-3805717 MS.gene29341:CDS 60.0%
GTTCTTCCCCTGCGAGGGTA+AGG - chr7.2:3803448-3803467 None:intergenic 60.0%
!! CGGTGGACGGGCTAGAGATT+TGG + chr7.2:3805715-3805734 MS.gene29341:CDS 60.0%
CTAGCCCGTCCACCGCGTAA+GGG - chr7.2:3805710-3805729 None:intergenic 65.0%
CTTCGATCCGTGCGTCGCAC+GGG + chr7.2:3800991-3801010 MS.gene29341:intron 65.0%
GATAGGACCCGTGCGACGCA+CGG - chr7.2:3801001-3801020 None:intergenic 65.0%
GCCGAACCTGACTTTGCGGG+TGG - chr7.2:3803478-3803497 None:intergenic 65.0%
TCTAGCCCGTCCACCGCGTA+AGG - chr7.2:3805711-3805730 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 3800427 3806400 3800427 ID=MS.gene29341
chr7.2 mRNA 3800427 3806400 3800427 ID=MS.gene29341.t1;Parent=MS.gene29341
chr7.2 exon 3800427 3800634 3800427 ID=MS.gene29341.t1.exon1;Parent=MS.gene29341.t1
chr7.2 CDS 3800427 3800634 3800427 ID=cds.MS.gene29341.t1;Parent=MS.gene29341.t1
chr7.2 exon 3802845 3803134 3802845 ID=MS.gene29341.t1.exon2;Parent=MS.gene29341.t1
chr7.2 CDS 3802845 3803134 3802845 ID=cds.MS.gene29341.t1;Parent=MS.gene29341.t1
chr7.2 exon 3803247 3803490 3803247 ID=MS.gene29341.t1.exon3;Parent=MS.gene29341.t1
chr7.2 CDS 3803247 3803490 3803247 ID=cds.MS.gene29341.t1;Parent=MS.gene29341.t1
chr7.2 exon 3803687 3804025 3803687 ID=MS.gene29341.t1.exon4;Parent=MS.gene29341.t1
chr7.2 CDS 3803687 3804025 3803687 ID=cds.MS.gene29341.t1;Parent=MS.gene29341.t1
chr7.2 exon 3804232 3804317 3804232 ID=MS.gene29341.t1.exon5;Parent=MS.gene29341.t1
chr7.2 CDS 3804232 3804317 3804232 ID=cds.MS.gene29341.t1;Parent=MS.gene29341.t1
chr7.2 exon 3804508 3804615 3804508 ID=MS.gene29341.t1.exon6;Parent=MS.gene29341.t1
chr7.2 CDS 3804508 3804615 3804508 ID=cds.MS.gene29341.t1;Parent=MS.gene29341.t1
chr7.2 exon 3804742 3805046 3804742 ID=MS.gene29341.t1.exon7;Parent=MS.gene29341.t1
chr7.2 CDS 3804742 3805046 3804742 ID=cds.MS.gene29341.t1;Parent=MS.gene29341.t1
chr7.2 exon 3805145 3805408 3805145 ID=MS.gene29341.t1.exon8;Parent=MS.gene29341.t1
chr7.2 CDS 3805145 3805408 3805145 ID=cds.MS.gene29341.t1;Parent=MS.gene29341.t1
chr7.2 exon 3805647 3806400 3805647 ID=MS.gene29341.t1.exon9;Parent=MS.gene29341.t1
chr7.2 CDS 3805647 3806400 3805647 ID=cds.MS.gene29341.t1;Parent=MS.gene29341.t1
Gene Sequence

>MS.gene29341

ATGTTTCATAACATTATGAACGTCCTTAGCATCCATGATGATAATAATAAGAACAAGAATGACCGCATTATGAGAGGGGAAGTAGTATTGATGAAGAAAAATGTGTTGGATTTTAAGGATTTGAGTGCCTCATTTCTTGATGGTGTTCATGAGTTGGTGGGAAAAAGGGTTTCTCTCCAACTTGTAAGTGCTGATAAAGGCGACCCTGGTTAGTATTTTCATCCTCATACTTTGTTCTTTCTCCTTCTTTTTTTCCCTAGAAAAATTTCTCCTTTTACAATTAATCATGTTTATTTCTCTTTTTGTTATCATCCATAACCCACTATAATGAGTATTTTTGACCCTAAATAATAGATGTCCTGGGGCATTCCACCACTTAGACTATTTAATTTAGATTTACTATGAGATGAATCATCGGATCAACAACCACTTGGATACTTGATTTGAGCTTAGTTCAAAGTCAATGCAAAACGTTGTCTTATTCTTGTGTTTGACACATAAATATTAAAACCTTTGATTTTGAATAGAAAAAAAATAATAGTTTAAGTTAAATGAAAACTAGAACTTCGATCCGTGCGTCGCACGGGTCCTATCAACTATAATAAAGATCAATAAGCTATATTATATATTTTCGTTGATGTTAAATAAGTTATAAAAAAAAAATTGATCAATAAGCTAATTTTATTTAATCTATTCGATGTCATAACAAATTAATGTTTTATGTCTTATATGAAAATTTATTTCATAAAATACGTGTTATTACAAAATAAATTTTAAATAAAATATTTTAAAAAATAATACCATTATTCAAAATTTAAACCACTAATTTTTTTCCTTATATTCAAAATTTGATTAGAGTTCTTCTACAAACCCTTAGAAGATTTGATTTCTTCTTCTTCTTTTTTGAATGCTTGTGAAAGTTCTAATGCATTACTTGCAAGTTAGAAGTGCATGGGAATTGGGAGGACATGATAAATAAAATATCTAAGGATGAAATAGTAAAATCACTTCCTACCCCAACCAATACGCTTCAATACCCTATATTCGCAGCCCCACCCTATTCTGTATTCTGAAAATTCAACGAGTTCTTCTTTTAGGCTGGGAGGTTAATTAAGGTTTCTCATGAGTCATGAGTCATGACTAAGGTGAAACCAATATGGGTTAGGAAAGAAAAACTCATTTCTTTATTAGAAAAAATTAATGTAAGTTATATTCTTTAAATATATTATACACATGTATTCCTTTGTATTTGAAAATATATGCTACGATATAAATATATTTTTTGGACAATATCGTGTAAATATATTTTAAAGAGTAATATTATGATATAATTAATAAATTGATGAAATATTTATTGCATTTCTTTTAGAAAATAGCCAAGGCTCTAGCTAGAGTAAAGCTGCAAATTAACTTATTATAATTGTCCATGAGGTATCAACTCAACAAGAGCTTGACATTATACTCAAAGAAAGAAGTTCAAATCTCAACTAAAACATCTATAAAATGACAATTGGTGACACTGTTATTAACATTAATAATAATTTACAATTACAATTCCCCACTTGCTTTTTTAAATTGTTATTATAATTTTCTGCATAGGTGATATAAAATGCACATGTGTACATAAGTAAGAGATAAAGAATACAGTCGACCAATTTAGACTTAGATATTTCACCCTGTTTTAAATGCAATCTCTAAAATATATAAAAATAAAAAATAGTCATTAAATTAAATAAAATTGCATCCCTGTGGTTAAGTTGTTGTAGACTATATGAGACAATTTTTCATATACTTGAGATTAAAAGACATATTTGGTACACTTTAAGAATTAATTGTTATTTTATGTACTTTTGATTGTAAATTTGAGAGATTATAATGATCCTTCAGAGATTAAATTGAGAGTTTATTGTTGTTAAAAAAAAAATAGAGAGTTTATTAATTAAAGAATAAAATAGAAAAATACTTAGAGAAATTTAATACCGATTAAACCATTAAATGTAGTAATCATTACCATTTAATTACCAATATTATGTAAATTTTGGGTTATGTGAGTATTAAATTATTACCTTGATGAAAGTTCTTGTGAGCTTATCTCAGTTGGTTAGGACAATGCATAAAATATGCAAGGTCCGGGGTTCAAACCCCGGTCACTACCGAAAAAAGATATGCTCATATTAATATCATTTTTGTAAAAGGAGTTTCTCTTACAAGTCACAGAGTAAAGAGTTCACTTTAGATAAAAAATAATAATACAACTTTAATTTACCAAACTTAATTTTTCTATACTGTTAATTTAATTTAATATAACCCTTAAAAAAATTAATATAAATATAATACTTATCAAGAAAACTATCTTTGAATAATGCTTTATTTACCATATGTTAAGCCTGAATGGTATTATGATCATAAATTTTGAAGGCAATGGCATGAAAGGAAAAGTTGGGAAGCCTGCATATCTAGAAGACTGGAATGGCACAATCACACCCTTAATAGCTGGTGAATCAACATACAAGGTTACATTTGATTTGGATGATGATATAGGAACACCAGGAGCATTTCTAATTAAGAATAATCATCACAGTGAGTTCTACCTAAAAAGCTTGACCCTTGAAAATGTTCCTGGCCAAGGTGTTATCCACTTTATATGCAACTCTTGGGTATACCCTTCTCAAAAATATCAAAAGGATCGCATTTTCTTCAGCAACAAGGTATAGAGAAGAAAAATATATTAACTTTTCATCTAATAATTTGTATTTGAGGTTTATAATAATTAGGGACCTTGAACTATAGTACTAATTACATATTGTTAATGTGTTGCAGACATACTTTCTAAGTGAAACACCAGCTCCACTTCTTAAGTATAGAGAAGAAGAACTTGAAACTTTAAGAGGCTCTGGAGATAGCATCCAACTGAAAGAATGGGACAGGGTATATGATTATGCATACTATAATGATTTGGCGGATCCTGATAAAGGTCCGAAATATGTTCGTCCAGTTCTTGGAGGGTCCAGTGAATATCCTTACCCTCGCAGGGGAAGAACTAATAGACCACCCGCAAAGTCAGGTTCGGCTTTTCCACAATGATCACCAGTTTATTAATTATGTACTCGCAATTAATATATTTTTCTTACACATGCATTCAATCATATTCCATTATAGTTTACTTCAGAAAGATGTGATTGAAAGACAATTAGTCCTGCCTATTATGGTTAGAAATTTCTAATGTGGTGATTTATTTATTTTGTTGATAATATTTCCAGATGCTAATAGTGAGAGTAGATTGAATCTTGCCATGAGCTTAGACATCTATGTTCCAAGGGACGAAAGATTTGGTCACGTGAAAATGTCAGACTTTCTTGCTTATGCAATTAAAGCTATAGTTCAAGTTATCAAACCTGAACTAGAATCACTATTTGATAGCACTCCTAATGAGTTTGATAGCTTTGAAGATGTACTTAAACTCTATGAAGGTGGGATAGAAGTTCCTGAGGGTGCAGTTAAAAGAATTAGGGATAAAATCCCTGCTGAAATGCTCAAAGAAATTCTCCGAACTGACGGTCAAAAGCTCCTCAAATATCCTGTGCCTCAAGTGATTAAAGGTATTTTAGATGTATGTAGTGTTTGAATGTAACTACATGTGTAATGTCAGACAGCAACATGTGTCAGACACCGGATACATGTTCGTTATGAAGTGTTGGTGCTACATAGATTTTTACCTATTATATTGCATACCATAATCAAGAAAAGTCATGCATTTTGCAAACCATTATTGTATTGTAATGGCACTCTTAATGATTTTGAGCAGAGGATAAATCTGCATGGAGAACTGATGAAGAGTTTGCTAGAGAAATGCTGGCTGGTGTAAATCCTGTCATAATTCGTGGCCTCCAAGTAAGCCTTGCGGAGTTTAGCTATCACAATTTCTTAAAATACATTGTTTTCCAAAAGAAAATTGTATTTTTCTTATACTTATAAGTTATGATTACCCAAATTTATTTCCTGAAACTTAAGAGACTCACTAGTCAAATAAATCATGGACTATATTGTCCCCTCACATTTGTCCTTATTAATTAAATTGCAGGAATTTCCACCAACATCTAAGCTAGATCCTAAAGTCTACGGCGATCAATCTAGCACAATAAGGAAATCAGATATTGAGAGCAGCCTGGATGGACTCACAGTTGACGAGGCAATTTTCAAATTTGATATGATATTCTGTTTTGATCATACAATTTTCTTTGAATTTTGTGACAACTTTGCAGTCAAATTCAATTCATTTTTTTTAATCTAATCTAATTATTCATTGTGTTAATAGGCAGTTGCACAAAAGAAGTTGTTTATATTGGATCACCATGATGCACTGATGACATACTTGAGGAGGATAAATTCCACTTCTACAAAGACATATGCCAGTAGGACAATTCTTTTTCTGCAACAAAATGGGACTTTGAAGCCATTGGCGATTGAATTGAGTTTGCCACATCCCAAAGGAGATCAACATGGTGCCATTAGTAATGTTTACACGCCTGCCGAAAATGGTGTTGAAAATTCCATCTGGCAATTGGCTAAAGCTTATGTAGCAGTAAACGACTCTGGTTATCATCAGCTTATCAGCCACTGGTATAAGTTTATTTTATTTTATTTTGGCAAAATTACTTCTATGGTCCCTTAGCACTCAAGTTTTCCTTATATTATATATTTCATGTTGTATATCACAGGTTGCATACTCATGCGTCGATTGAGCCATTCATTATATCTGCAAACAGACAACTTAGTGTTCTTCACCCCATTCATAAACTATTGCATCCTCATTTCCGCGACACAATGAATATAAATGCACTTGCGCGACAAATCCTCATCAATGCAGGTGGCCTTTTAGAGGCCACAGTGTATCCTTCCAAGTATGCCATGGAGTTGTCATCAGCGCTTTATAAGGATTGGACTTTCCCCGAACAAGCACTGCCAGTAGATCTTGTCAAGAGGTAAACAGACCACACAGTCAAAGACCAATTAGACCATCACTAATATATTTATGAAATATTTGGCTAAACAACTTAACTGAGTATTCATAAAAGATCCTTTGTGAATTATTATTATTTTTATGTTTTGTTAACATTCCGGTTTCTAAGATAAAGGAGCTTAGTAATCTAGAATTTGGCCGTTGTAAGTAAAGATCCATTTTTTTATGATCATGAACTGATACGTTGTTGGTTATTTCAGAGGAATGGCAATTAAAGATTCAGCATCTCCGTATGGCCTTCGACTAATAATCGACGATTACCCTTACGCGGTGGACGGGCTAGAGATTTGGTTTGCAATCAACACATGGGTTCAGGACTATTGTTCCTTTTACTACAAGAATGATGACACGGTAAAGAAAGATGCAGAACTACAATCTTGGTGGAAGGAATTAATACAAGAAGGTCACGGCGACAAGAAAAACGAGCCTTGGTGGCCAAAGATGCAAACAGTGAAAGAGTTGACGGAAACTTGCACAATCATTATATGGATTGCTTCAGCTCTACATGCAGCTGTAAACTTTGGACAATATCCTTTTGCAGGTTACTCACCGAACCGTCCAACAATAAGTCGTCGATTCATGCCTGAGAAAGGAACTATAGAGTATGATGAAGTTGTGACAAATCCCGATAAAGCTTTTTTGAAAACAATCACCGCACAATTGCAGACTCTTGTTGGCATTTCGCTTATTGAAATTTTGTCTACACATTCTTCTGATGAGGTCTACCTTGGACAAAGAGACAGTATGCATTGGACATGTGATGCAGAGCCATTGGAAGCATTTGACAGGTTTGGAAAGAAACTGAAAGAAATTGAAGAGAGAATTGTAGCTATGAATGATGATGTGAATCTCAAAAATCGAGTTGGACCTGTTAAAATGCCATACACTTTGCTTTATCCTAGAAGTGAAAGTGGCCTAACTGGTGCAGGCATTCCCAATAGTGTGTCCATTTGA
Protein sequence

>MS.gene29341.t1

MFHNIMNVLSIHDDNNKNKNDRIMRGEVVLMKKNVLDFKDLSASFLDGVHELVGKRVSLQLVSADKGDPGNGMKGKVGKPAYLEDWNGTITPLIAGESTYKVTFDLDDDIGTPGAFLIKNNHHSEFYLKSLTLENVPGQGVIHFICNSWVYPSQKYQKDRIFFSNKTYFLSETPAPLLKYREEELETLRGSGDSIQLKEWDRVYDYAYYNDLADPDKGPKYVRPVLGGSSEYPYPRRGRTNRPPAKSDANSESRLNLAMSLDIYVPRDERFGHVKMSDFLAYAIKAIVQVIKPELESLFDSTPNEFDSFEDVLKLYEGGIEVPEGAVKRIRDKIPAEMLKEILRTDGQKLLKYPVPQVIKEDKSAWRTDEEFAREMLAGVNPVIIRGLQEFPPTSKLDPKVYGDQSSTIRKSDIESSLDGLTVDEAVAQKKLFILDHHDALMTYLRRINSTSTKTYASRTILFLQQNGTLKPLAIELSLPHPKGDQHGAISNVYTPAENGVENSIWQLAKAYVAVNDSGYHQLISHWLHTHASIEPFIISANRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGLLEATVYPSKYAMELSSALYKDWTFPEQALPVDLVKRGMAIKDSASPYGLRLIIDDYPYAVDGLEIWFAINTWVQDYCSFYYKNDDTVKKDAELQSWWKELIQEGHGDKKNEPWWPKMQTVKELTETCTIIIWIASALHAAVNFGQYPFAGYSPNRPTISRRFMPEKGTIEYDEVVTNPDKAFLKTITAQLQTLVGISLIEILSTHSSDEVYLGQRDSMHWTCDAEPLEAFDRFGKKLKEIEERIVAMNDDVNLKNRVGPVKMPYTLLYPRSESGLTGAGIPNSVSI