Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30357.t1 | XP_013444436.2 | 91.8 | 170 | 13 | 1 | 1 | 170 | 1 | 169 | 1.30E-81 | 312.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30357.t1 | Q8LFY8 | 54.8 | 62 | 26 | 1 | 81 | 140 | 172 | 233 | 2.9e-13 | 76.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30357.t1 | A0A396GD85 | 91.8 | 170 | 13 | 1 | 1 | 170 | 1 | 169 | 9.4e-82 | 312.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene054093 | MS.gene30357 | 0.808693 | 2.73E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30357.t1 | MTR_8g019710 | 89.928 | 139 | 13 | 1 | 32 | 170 | 1 | 138 | 8.33e-90 | 258 |
MS.gene30357.t1 | MTR_2g041200 | 29.032 | 124 | 81 | 3 | 14 | 131 | 32 | 154 | 2.20e-17 | 75.5 |
MS.gene30357.t1 | MTR_6g055030 | 33.071 | 127 | 77 | 2 | 13 | 133 | 49 | 173 | 1.04e-16 | 76.3 |
MS.gene30357.t1 | MTR_2g090905 | 41.096 | 73 | 39 | 1 | 69 | 137 | 50 | 122 | 1.47e-16 | 72.0 |
MS.gene30357.t1 | MTR_5g064890 | 51.429 | 70 | 28 | 1 | 81 | 144 | 149 | 218 | 1.87e-16 | 75.5 |
MS.gene30357.t1 | MTR_8g066780 | 53.226 | 62 | 29 | 0 | 70 | 131 | 126 | 187 | 2.79e-16 | 75.1 |
MS.gene30357.t1 | MTR_3g110190 | 34.127 | 126 | 75 | 4 | 15 | 133 | 15 | 139 | 2.96e-16 | 75.1 |
MS.gene30357.t1 | MTR_7g059360 | 46.970 | 66 | 30 | 1 | 85 | 145 | 157 | 222 | 7.73e-16 | 72.8 |
MS.gene30357.t1 | MTR_8g089880 | 38.947 | 95 | 42 | 2 | 67 | 146 | 135 | 228 | 4.25e-15 | 71.2 |
MS.gene30357.t1 | MTR_5g030010 | 54.386 | 57 | 26 | 0 | 84 | 140 | 146 | 202 | 7.57e-15 | 71.2 |
MS.gene30357.t1 | MTR_2g090950 | 34.831 | 89 | 52 | 2 | 69 | 153 | 102 | 188 | 1.18e-14 | 69.3 |
MS.gene30357.t1 | MTR_5g082940 | 36.559 | 93 | 57 | 2 | 39 | 131 | 58 | 148 | 1.78e-14 | 67.8 |
MS.gene30357.t1 | MTR_5g026720 | 27.333 | 150 | 93 | 4 | 6 | 148 | 11 | 151 | 2.95e-14 | 67.0 |
MS.gene30357.t1 | MTR_1g082550 | 36.667 | 90 | 50 | 2 | 80 | 164 | 121 | 208 | 3.16e-14 | 69.3 |
MS.gene30357.t1 | MTR_3g099650 | 42.188 | 64 | 36 | 1 | 69 | 131 | 118 | 181 | 3.39e-14 | 69.3 |
MS.gene30357.t1 | MTR_4g063070 | 45.312 | 64 | 35 | 0 | 70 | 133 | 320 | 383 | 3.43e-14 | 69.3 |
MS.gene30357.t1 | MTR_2g055790 | 50.000 | 54 | 27 | 0 | 78 | 131 | 92 | 145 | 4.44e-14 | 67.4 |
MS.gene30357.t1 | MTR_4g022410 | 27.517 | 149 | 96 | 4 | 3 | 147 | 38 | 178 | 5.03e-14 | 67.0 |
MS.gene30357.t1 | MTR_2g009310 | 52.632 | 57 | 25 | 1 | 81 | 137 | 156 | 210 | 5.12e-14 | 68.9 |
MS.gene30357.t1 | MTR_3g078450 | 37.500 | 96 | 50 | 3 | 69 | 154 | 87 | 182 | 5.25e-14 | 67.4 |
MS.gene30357.t1 | MTR_4g056590 | 52.000 | 50 | 24 | 0 | 79 | 128 | 116 | 165 | 5.38e-14 | 67.0 |
MS.gene30357.t1 | MTR_5g071930 | 43.421 | 76 | 36 | 1 | 77 | 152 | 80 | 148 | 6.00e-14 | 67.0 |
MS.gene30357.t1 | MTR_4g093830 | 50.980 | 51 | 25 | 0 | 81 | 131 | 147 | 197 | 6.24e-14 | 68.6 |
MS.gene30357.t1 | MTR_6g087150 | 32.867 | 143 | 81 | 6 | 13 | 142 | 39 | 179 | 6.76e-14 | 68.6 |
MS.gene30357.t1 | MTR_1g043410 | 27.517 | 149 | 89 | 3 | 11 | 140 | 37 | 185 | 7.31e-14 | 68.2 |
MS.gene30357.t1 | MTR_7g116210 | 45.161 | 62 | 31 | 1 | 68 | 129 | 20 | 78 | 9.43e-14 | 64.3 |
MS.gene30357.t1 | MTR_3g087900 | 34.091 | 132 | 69 | 7 | 20 | 148 | 17 | 133 | 9.48e-14 | 65.5 |
MS.gene30357.t1 | MTR_3g086700 | 46.429 | 56 | 30 | 0 | 76 | 131 | 65 | 120 | 1.03e-13 | 66.2 |
MS.gene30357.t1 | MTR_5g026730 | 38.554 | 83 | 50 | 1 | 47 | 129 | 56 | 137 | 1.34e-13 | 65.5 |
MS.gene30357.t1 | MTR_3g464780 | 44.318 | 88 | 44 | 3 | 70 | 152 | 114 | 201 | 1.43e-13 | 66.6 |
MS.gene30357.t1 | MTR_3g086730 | 46.429 | 56 | 30 | 0 | 76 | 131 | 65 | 120 | 1.59e-13 | 66.2 |
MS.gene30357.t1 | MTR_5g024730 | 45.455 | 66 | 35 | 1 | 70 | 135 | 89 | 153 | 1.97e-13 | 65.9 |
MS.gene30357.t1 | MTR_3g078470 | 44.262 | 61 | 34 | 0 | 69 | 129 | 87 | 147 | 2.58e-13 | 65.5 |
MS.gene30357.t1 | MTR_6g055030 | 54.348 | 46 | 21 | 0 | 88 | 133 | 97 | 142 | 3.45e-13 | 65.9 |
MS.gene30357.t1 | MTR_7g116200 | 45.902 | 61 | 30 | 1 | 69 | 129 | 79 | 136 | 3.87e-13 | 64.3 |
MS.gene30357.t1 | MTR_2g436100 | 34.118 | 85 | 47 | 2 | 70 | 154 | 105 | 180 | 3.90e-13 | 65.9 |
MS.gene30357.t1 | MTR_7g113800 | 39.726 | 73 | 38 | 2 | 85 | 157 | 119 | 185 | 4.27e-13 | 66.2 |
MS.gene30357.t1 | MTR_3g094000 | 40.000 | 70 | 42 | 0 | 71 | 140 | 104 | 173 | 4.32e-13 | 64.3 |
MS.gene30357.t1 | MTR_7g073200 | 47.368 | 57 | 30 | 0 | 75 | 131 | 96 | 152 | 4.43e-13 | 64.3 |
MS.gene30357.t1 | MTR_8g092960 | 62.222 | 45 | 17 | 0 | 84 | 128 | 128 | 172 | 5.50e-13 | 64.7 |
MS.gene30357.t1 | MTR_8g092840 | 62.222 | 45 | 17 | 0 | 84 | 128 | 138 | 182 | 5.77e-13 | 64.7 |
MS.gene30357.t1 | MTR_4g030070 | 44.828 | 58 | 29 | 1 | 71 | 128 | 98 | 152 | 7.64e-13 | 64.3 |
MS.gene30357.t1 | MTR_3g095560 | 39.474 | 76 | 42 | 1 | 83 | 154 | 133 | 208 | 7.74e-13 | 64.7 |
MS.gene30357.t1 | MTR_7g116220 | 43.548 | 62 | 34 | 1 | 69 | 129 | 81 | 142 | 9.41e-13 | 63.5 |
MS.gene30357.t1 | MTR_1g100737 | 47.917 | 48 | 25 | 0 | 85 | 132 | 122 | 169 | 1.17e-12 | 63.5 |
MS.gene30357.t1 | MTR_5g064980 | 43.750 | 64 | 35 | 1 | 69 | 131 | 119 | 182 | 1.18e-12 | 65.1 |
MS.gene30357.t1 | MTR_1g070425 | 43.548 | 62 | 34 | 1 | 69 | 129 | 79 | 140 | 1.29e-12 | 63.2 |
MS.gene30357.t1 | MTR_1g074190 | 45.455 | 66 | 34 | 1 | 68 | 131 | 111 | 176 | 1.33e-12 | 64.7 |
MS.gene30357.t1 | MTR_5g064990 | 40.278 | 72 | 42 | 1 | 70 | 140 | 126 | 197 | 1.66e-12 | 64.7 |
MS.gene30357.t1 | MTR_5g092790 | 40.278 | 72 | 34 | 1 | 60 | 131 | 168 | 230 | 1.86e-12 | 63.5 |
MS.gene30357.t1 | MTR_8g093010 | 57.778 | 45 | 19 | 0 | 84 | 128 | 132 | 176 | 2.11e-12 | 63.2 |
MS.gene30357.t1 | MTR_8g071815 | 50.000 | 52 | 24 | 1 | 86 | 137 | 90 | 139 | 2.14e-12 | 62.4 |
MS.gene30357.t1 | MTR_2g096350 | 34.940 | 83 | 54 | 0 | 70 | 152 | 119 | 201 | 2.75e-12 | 62.8 |
MS.gene30357.t1 | MTR_5g076990 | 45.833 | 72 | 35 | 2 | 69 | 138 | 87 | 156 | 3.26e-12 | 63.5 |
MS.gene30357.t1 | MTR_3g100400 | 47.917 | 48 | 25 | 0 | 85 | 132 | 155 | 202 | 4.18e-12 | 63.5 |
MS.gene30357.t1 | MTR_8g073120 | 41.667 | 60 | 35 | 0 | 70 | 129 | 82 | 141 | 4.83e-12 | 62.0 |
MS.gene30357.t1 | MTR_8g023400 | 38.776 | 98 | 54 | 4 | 70 | 166 | 104 | 196 | 5.02e-12 | 63.2 |
MS.gene30357.t1 | MTR_7g108855 | 36.364 | 66 | 42 | 0 | 69 | 134 | 77 | 142 | 5.83e-12 | 61.6 |
MS.gene30357.t1 | MTR_8g066740 | 39.241 | 79 | 44 | 2 | 69 | 145 | 87 | 163 | 6.08e-12 | 62.8 |
MS.gene30357.t1 | MTR_4g129420 | 46.809 | 47 | 25 | 0 | 85 | 131 | 143 | 189 | 6.11e-12 | 63.2 |
MS.gene30357.t1 | MTR_4g106680 | 39.474 | 76 | 41 | 2 | 80 | 150 | 125 | 200 | 8.20e-12 | 62.4 |
MS.gene30357.t1 | MTR_7g116180 | 41.935 | 62 | 35 | 1 | 69 | 129 | 78 | 139 | 9.82e-12 | 60.5 |
MS.gene30357.t1 | MTR_1g070140 | 50.980 | 51 | 25 | 0 | 86 | 136 | 130 | 180 | 1.23e-11 | 62.0 |
MS.gene30357.t1 | MTR_7g076250 | 45.000 | 60 | 32 | 1 | 69 | 128 | 74 | 132 | 1.28e-11 | 60.5 |
MS.gene30357.t1 | MTR_5g066250 | 45.833 | 48 | 26 | 0 | 85 | 132 | 159 | 206 | 1.38e-11 | 62.0 |
MS.gene30357.t1 | MTR_2g044570 | 48.936 | 47 | 24 | 0 | 85 | 131 | 82 | 128 | 1.58e-11 | 61.6 |
MS.gene30357.t1 | MTR_3g114500 | 41.509 | 53 | 31 | 0 | 81 | 133 | 66 | 118 | 1.59e-11 | 58.9 |
MS.gene30357.t1 | MTR_3g091620 | 51.064 | 47 | 23 | 0 | 83 | 129 | 124 | 170 | 1.81e-11 | 61.6 |
MS.gene30357.t1 | MTR_8g098770 | 26.812 | 138 | 86 | 5 | 1 | 130 | 1 | 131 | 1.83e-11 | 59.7 |
MS.gene30357.t1 | MTR_4g120270 | 45.098 | 51 | 28 | 0 | 82 | 132 | 100 | 150 | 1.89e-11 | 61.2 |
MS.gene30357.t1 | MTR_8g074900 | 53.191 | 47 | 22 | 0 | 82 | 128 | 176 | 222 | 1.93e-11 | 60.5 |
MS.gene30357.t1 | MTR_8g009190 | 42.593 | 54 | 31 | 0 | 78 | 131 | 97 | 150 | 2.15e-11 | 61.2 |
MS.gene30357.t1 | MTR_8g092985 | 55.556 | 45 | 20 | 0 | 84 | 128 | 136 | 180 | 2.36e-11 | 60.1 |
MS.gene30357.t1 | MTR_8g092930 | 55.556 | 45 | 20 | 0 | 84 | 128 | 137 | 181 | 2.59e-11 | 60.1 |
MS.gene30357.t1 | MTR_8g092970 | 53.333 | 45 | 21 | 0 | 84 | 128 | 129 | 173 | 3.27e-11 | 59.7 |
MS.gene30357.t1 | MTR_3g071300 | 28.926 | 121 | 76 | 3 | 21 | 131 | 31 | 151 | 3.44e-11 | 58.9 |
MS.gene30357.t1 | MTR_8g092990 | 53.333 | 45 | 21 | 0 | 84 | 128 | 139 | 183 | 3.97e-11 | 59.7 |
MS.gene30357.t1 | MTR_5g092750 | 41.333 | 75 | 34 | 2 | 63 | 136 | 171 | 236 | 4.26e-11 | 59.7 |
MS.gene30357.t1 | MTR_5g022920 | 48.000 | 50 | 26 | 0 | 82 | 131 | 185 | 234 | 5.05e-11 | 59.7 |
MS.gene30357.t1 | MTR_4g116460 | 45.161 | 62 | 31 | 3 | 72 | 131 | 426 | 486 | 9.40e-11 | 59.7 |
MS.gene30357.t1 | MTR_5g034790 | 44.444 | 63 | 31 | 2 | 70 | 131 | 128 | 187 | 9.47e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30357.t1 | AT4G09100 | 37.363 | 91 | 52 | 2 | 42 | 131 | 44 | 130 | 2.44e-16 | 71.6 |
MS.gene30357.t1 | AT5G05280 | 53.030 | 66 | 30 | 1 | 81 | 145 | 108 | 173 | 2.69e-16 | 72.8 |
MS.gene30357.t1 | AT1G72220 | 51.471 | 68 | 29 | 2 | 72 | 137 | 165 | 230 | 2.78e-16 | 75.5 |
MS.gene30357.t1 | AT5G17600 | 40.000 | 105 | 56 | 4 | 47 | 149 | 106 | 205 | 3.64e-16 | 75.1 |
MS.gene30357.t1 | AT5G10380 | 54.386 | 57 | 26 | 0 | 81 | 137 | 130 | 186 | 9.34e-16 | 73.2 |
MS.gene30357.t1 | AT3G10910 | 33.884 | 121 | 73 | 3 | 37 | 152 | 63 | 181 | 9.66e-16 | 71.2 |
MS.gene30357.t1 | AT3G05200 | 46.875 | 64 | 33 | 1 | 69 | 131 | 110 | 173 | 1.00e-15 | 73.9 |
MS.gene30357.t1 | AT4G17905 | 58.824 | 51 | 21 | 0 | 81 | 131 | 150 | 200 | 2.51e-15 | 72.4 |
MS.gene30357.t1 | AT4G17905 | 58.824 | 51 | 21 | 0 | 81 | 131 | 176 | 226 | 2.82e-15 | 72.4 |
MS.gene30357.t1 | AT2G35000 | 46.875 | 64 | 33 | 1 | 69 | 131 | 117 | 180 | 4.63e-15 | 72.0 |
MS.gene30357.t1 | AT2G20030 | 33.333 | 132 | 69 | 5 | 16 | 132 | 43 | 170 | 1.04e-14 | 70.9 |
MS.gene30357.t1 | AT3G03550 | 37.383 | 107 | 50 | 4 | 66 | 158 | 140 | 243 | 1.05e-14 | 70.9 |
MS.gene30357.t1 | AT5G27420 | 43.478 | 69 | 38 | 1 | 69 | 136 | 106 | 174 | 1.63e-14 | 70.5 |
MS.gene30357.t1 | AT4G33565 | 48.333 | 60 | 29 | 1 | 72 | 131 | 205 | 262 | 3.09e-14 | 69.7 |
MS.gene30357.t1 | AT4G17920 | 30.588 | 170 | 100 | 6 | 1 | 153 | 9 | 177 | 3.44e-14 | 68.9 |
MS.gene30357.t1 | AT2G27940 | 37.895 | 95 | 55 | 3 | 37 | 129 | 91 | 183 | 4.85e-14 | 67.8 |
MS.gene30357.t1 | AT4G40070 | 37.778 | 90 | 48 | 2 | 70 | 151 | 107 | 196 | 6.61e-14 | 68.6 |
MS.gene30357.t1 | AT1G04360 | 29.677 | 155 | 85 | 6 | 14 | 146 | 50 | 202 | 1.21e-13 | 67.8 |
MS.gene30357.t1 | AT1G72200 | 45.312 | 64 | 34 | 1 | 69 | 131 | 126 | 189 | 1.41e-13 | 67.8 |
MS.gene30357.t1 | AT5G43420 | 34.091 | 88 | 43 | 2 | 82 | 154 | 134 | 221 | 1.42e-13 | 67.8 |
MS.gene30357.t1 | AT2G42350 | 45.614 | 57 | 27 | 1 | 80 | 132 | 90 | 146 | 1.44e-13 | 66.2 |
MS.gene30357.t1 | AT5G01880 | 53.704 | 54 | 25 | 0 | 81 | 134 | 100 | 153 | 2.27e-13 | 64.7 |
MS.gene30357.t1 | AT1G35330 | 32.353 | 102 | 62 | 3 | 69 | 166 | 111 | 209 | 2.28e-13 | 67.0 |
MS.gene30357.t1 | AT2G34990 | 32.667 | 150 | 70 | 7 | 5 | 128 | 16 | 160 | 2.92e-13 | 66.6 |
MS.gene30357.t1 | AT1G76410 | 31.967 | 122 | 71 | 3 | 15 | 128 | 29 | 146 | 3.46e-13 | 64.7 |
MS.gene30357.t1 | AT4G09130 | 44.444 | 63 | 34 | 1 | 70 | 131 | 103 | 165 | 3.94e-13 | 66.2 |
MS.gene30357.t1 | AT4G09120 | 43.750 | 64 | 35 | 1 | 69 | 131 | 105 | 168 | 4.00e-13 | 66.2 |
MS.gene30357.t1 | AT4G15975 | 53.061 | 49 | 23 | 0 | 85 | 133 | 75 | 123 | 5.05e-13 | 65.1 |
MS.gene30357.t1 | AT1G49230 | 40.000 | 85 | 41 | 1 | 84 | 158 | 129 | 213 | 5.84e-13 | 64.7 |
MS.gene30357.t1 | AT2G42360 | 37.500 | 64 | 39 | 1 | 69 | 132 | 92 | 154 | 7.14e-13 | 64.7 |
MS.gene30357.t1 | AT4G10150 | 41.026 | 78 | 40 | 3 | 81 | 158 | 106 | 177 | 7.83e-13 | 64.7 |
MS.gene30357.t1 | AT4G35480 | 52.941 | 51 | 24 | 0 | 78 | 128 | 105 | 155 | 9.07e-13 | 63.9 |
MS.gene30357.t1 | AT3G16720 | 40.000 | 70 | 42 | 0 | 85 | 154 | 118 | 187 | 9.17e-13 | 65.1 |
MS.gene30357.t1 | AT1G22500 | 43.750 | 64 | 35 | 1 | 69 | 131 | 100 | 163 | 9.37e-13 | 65.5 |
MS.gene30357.t1 | AT4G28890 | 31.061 | 132 | 73 | 4 | 16 | 131 | 39 | 168 | 9.90e-13 | 65.5 |
MS.gene30357.t1 | AT4G10160 | 41.026 | 78 | 40 | 3 | 81 | 158 | 92 | 163 | 1.04e-12 | 63.9 |
MS.gene30357.t1 | AT2G17450 | 50.000 | 58 | 29 | 0 | 77 | 134 | 93 | 150 | 1.09e-12 | 63.2 |
MS.gene30357.t1 | AT5G58580 | 41.667 | 72 | 42 | 0 | 86 | 157 | 138 | 209 | 1.61e-12 | 64.3 |
MS.gene30357.t1 | AT2G35420 | 35.616 | 73 | 47 | 0 | 71 | 143 | 88 | 160 | 1.70e-12 | 63.9 |
MS.gene30357.t1 | AT2G34990 | 39.785 | 93 | 49 | 4 | 38 | 128 | 51 | 138 | 2.06e-12 | 63.9 |
MS.gene30357.t1 | AT5G05810 | 50.000 | 48 | 24 | 0 | 85 | 132 | 145 | 192 | 3.11e-12 | 63.9 |
MS.gene30357.t1 | AT4G38140 | 41.250 | 80 | 41 | 3 | 72 | 146 | 44 | 122 | 3.30e-12 | 61.2 |
MS.gene30357.t1 | AT1G26800 | 40.909 | 66 | 38 | 1 | 83 | 148 | 110 | 174 | 3.37e-12 | 62.4 |
MS.gene30357.t1 | AT1G49220 | 44.186 | 86 | 41 | 3 | 46 | 129 | 98 | 178 | 3.89e-12 | 62.8 |
MS.gene30357.t1 | AT1G32361 | 50.000 | 48 | 24 | 0 | 85 | 132 | 153 | 200 | 4.06e-12 | 63.5 |
MS.gene30357.t1 | AT1G49200 | 46.970 | 66 | 21 | 1 | 85 | 136 | 135 | 200 | 4.17e-12 | 62.4 |
MS.gene30357.t1 | AT3G62690 | 48.214 | 56 | 26 | 1 | 85 | 137 | 112 | 167 | 5.07e-12 | 62.8 |
MS.gene30357.t1 | AT3G18930 | 42.857 | 70 | 32 | 2 | 70 | 131 | 132 | 201 | 5.10e-12 | 63.2 |
MS.gene30357.t1 | AT3G18930 | 42.857 | 70 | 32 | 2 | 70 | 131 | 132 | 201 | 5.10e-12 | 63.2 |
MS.gene30357.t1 | AT3G18930 | 42.857 | 70 | 32 | 2 | 70 | 131 | 132 | 201 | 5.10e-12 | 63.2 |
MS.gene30357.t1 | AT4G17245 | 45.312 | 64 | 33 | 2 | 69 | 131 | 86 | 148 | 5.51e-12 | 61.2 |
MS.gene30357.t1 | AT5G66070 | 54.348 | 46 | 21 | 0 | 86 | 131 | 176 | 221 | 5.83e-12 | 62.0 |
MS.gene30357.t1 | AT5G66070 | 54.348 | 46 | 21 | 0 | 86 | 131 | 176 | 221 | 5.83e-12 | 62.0 |
MS.gene30357.t1 | AT4G09110 | 42.857 | 63 | 35 | 1 | 70 | 131 | 106 | 168 | 6.46e-12 | 62.8 |
MS.gene30357.t1 | AT1G23980 | 46.032 | 63 | 30 | 2 | 70 | 131 | 130 | 189 | 7.52e-12 | 62.8 |
MS.gene30357.t1 | AT5G66070 | 54.348 | 46 | 21 | 0 | 86 | 131 | 200 | 245 | 7.57e-12 | 62.0 |
MS.gene30357.t1 | AT1G53010 | 37.705 | 61 | 38 | 0 | 73 | 133 | 117 | 177 | 7.73e-12 | 60.8 |
MS.gene30357.t1 | AT5G47610 | 41.270 | 63 | 36 | 1 | 69 | 131 | 91 | 152 | 1.07e-11 | 60.5 |
MS.gene30357.t1 | AT3G60966 | 42.857 | 56 | 32 | 0 | 86 | 141 | 62 | 117 | 1.12e-11 | 59.7 |
MS.gene30357.t1 | AT2G37580 | 44.681 | 47 | 26 | 0 | 85 | 131 | 141 | 187 | 1.18e-11 | 61.2 |
MS.gene30357.t1 | AT1G63840 | 41.667 | 48 | 26 | 1 | 86 | 131 | 89 | 136 | 1.34e-11 | 60.1 |
MS.gene30357.t1 | AT5G46650 | 44.286 | 70 | 33 | 3 | 85 | 153 | 113 | 177 | 1.36e-11 | 61.6 |
MS.gene30357.t1 | AT1G80400 | 45.455 | 55 | 29 | 1 | 82 | 136 | 351 | 404 | 1.39e-11 | 62.0 |
MS.gene30357.t1 | AT1G49210 | 50.877 | 57 | 27 | 1 | 72 | 128 | 122 | 177 | 1.42e-11 | 60.8 |
MS.gene30357.t1 | AT2G17730 | 45.763 | 59 | 30 | 1 | 73 | 131 | 185 | 241 | 1.95e-11 | 60.8 |
MS.gene30357.t1 | AT4G24015 | 38.158 | 76 | 44 | 1 | 71 | 146 | 93 | 165 | 2.12e-11 | 59.7 |
MS.gene30357.t1 | AT2G44581 | 38.028 | 71 | 43 | 1 | 72 | 142 | 56 | 125 | 2.45e-11 | 58.9 |
MS.gene30357.t1 | AT3G18773 | 56.818 | 44 | 19 | 0 | 85 | 128 | 129 | 172 | 3.05e-11 | 60.1 |
MS.gene30357.t1 | AT1G33480 | 43.750 | 48 | 27 | 0 | 81 | 128 | 95 | 142 | 3.67e-11 | 60.1 |
MS.gene30357.t1 | AT5G53110 | 28.676 | 136 | 80 | 6 | 14 | 137 | 251 | 381 | 5.07e-11 | 60.5 |
MS.gene30357.t1 | AT2G44578 | 27.200 | 125 | 73 | 2 | 14 | 138 | 16 | 122 | 5.20e-11 | 58.2 |
MS.gene30357.t1 | AT3G20395 | 31.959 | 97 | 49 | 2 | 40 | 136 | 142 | 221 | 5.84e-11 | 59.3 |
MS.gene30357.t1 | AT1G51930 | 46.809 | 47 | 25 | 0 | 86 | 132 | 80 | 126 | 7.07e-11 | 57.4 |
MS.gene30357.t1 | AT2G28920 | 50.000 | 50 | 25 | 0 | 81 | 130 | 88 | 137 | 8.30e-11 | 57.4 |
MS.gene30357.t1 | AT1G20823 | 41.270 | 63 | 37 | 0 | 66 | 128 | 91 | 153 | 8.77e-11 | 58.5 |
Find 23 sgRNAs with CRISPR-Local
Find 23 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCGAACGCTTTCGTCTTCT+TGG | 0.236182 | 8.1:-79126075 | None:intergenic |
TAAGTGGCTTGCCTCTCATT+TGG | 0.289568 | 8.1:+79126141 | MS.gene30357:CDS |
GTCTAGGATTGAGAATATTC+TGG | 0.339427 | 8.1:+79126255 | MS.gene30357:CDS |
AAGTGGCTTGCCTCTCATTT+GGG | 0.340504 | 8.1:+79126142 | MS.gene30357:CDS |
AAATTTGTCATTAGAAGATA+TGG | 0.353977 | 8.1:-79125945 | None:intergenic |
TTATTTCTCAATGATCCATT+TGG | 0.399706 | 8.1:-79126205 | None:intergenic |
ATACATCTTGCATTGATAAG+TGG | 0.445695 | 8.1:+79126125 | MS.gene30357:CDS |
AAGATGTGATTCATCATGAT+TGG | 0.465792 | 8.1:-79125912 | None:intergenic |
TCCAAGAAGACGAAAGCGTT+CGG | 0.472308 | 8.1:+79126074 | MS.gene30357:CDS |
GATCAAGTAACTTCACCAAA+TGG | 0.483418 | 8.1:+79126190 | MS.gene30357:CDS |
GAAGAAATGTATATTCTCCC+TGG | 0.487643 | 8.1:+79125815 | MS.gene30357:CDS |
CTCCCTGGGATCATAATCAC+TGG | 0.513888 | 8.1:+79125830 | MS.gene30357:CDS |
GCTATGTCATTGTCACTAGT+AGG | 0.524624 | 8.1:-79126288 | None:intergenic |
TCATTCTCACAATGTTAGGA+TGG | 0.533704 | 8.1:+79125879 | MS.gene30357:CDS |
GCTCCAGTGATTATGATCCC+AGG | 0.533871 | 8.1:-79125833 | None:intergenic |
TCACAATGTTAGGATGGTGC+AGG | 0.539329 | 8.1:+79125885 | MS.gene30357:CDS |
AAATAATGATCATATGATTG+TGG | 0.549836 | 8.1:+79126222 | MS.gene30357:CDS |
CTCCAGTGATTATGATCCCA+GGG | 0.580855 | 8.1:-79125832 | None:intergenic |
AAGAAATGTATATTCTCCCT+GGG | 0.584644 | 8.1:+79125816 | MS.gene30357:CDS |
TTGTGGAAATTGTTGAGTCT+AGG | 0.586978 | 8.1:+79126239 | MS.gene30357:CDS |
CAACGGACATCCCAAATGAG+AGG | 0.653361 | 8.1:-79126152 | None:intergenic |
AACGAAGCTGATGCTGCACA+AGG | 0.656558 | 8.1:+79126013 | MS.gene30357:CDS |
TCAATCTGAGAGCGACACAA+CGG | 0.694218 | 8.1:-79126169 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATGATCATATGATTG+TGG | + | chr8.1:79126222-79126241 | MS.gene30357:CDS | 20.0% |
!! | AAATTTGTCATTAGAAGATA+TGG | - | chr8.1:79125948-79125967 | None:intergenic | 20.0% |
!! | TTATTTCTCAATGATCCATT+TGG | - | chr8.1:79126208-79126227 | None:intergenic | 25.0% |
!! | TTTTTCATTCTCACAATGTT+AGG | + | chr8.1:79125875-79125894 | MS.gene30357:CDS | 25.0% |
AAGAAATGTATATTCTCCCT+GGG | + | chr8.1:79125816-79125835 | MS.gene30357:CDS | 30.0% | |
AAGATGTGATTCATCATGAT+TGG | - | chr8.1:79125915-79125934 | None:intergenic | 30.0% | |
! | ATACATCTTGCATTGATAAG+TGG | + | chr8.1:79126125-79126144 | MS.gene30357:CDS | 30.0% |
GAAGAAATGTATATTCTCCC+TGG | + | chr8.1:79125815-79125834 | MS.gene30357:CDS | 35.0% | |
GATCAAGTAACTTCACCAAA+TGG | + | chr8.1:79126190-79126209 | MS.gene30357:CDS | 35.0% | |
TCATTCTCACAATGTTAGGA+TGG | + | chr8.1:79125879-79125898 | MS.gene30357:CDS | 35.0% | |
TTGTGGAAATTGTTGAGTCT+AGG | + | chr8.1:79126239-79126258 | MS.gene30357:CDS | 35.0% | |
! | GTCTAGGATTGAGAATATTC+TGG | + | chr8.1:79126255-79126274 | MS.gene30357:CDS | 35.0% |
CTCCAGTGATTATGATCCCA+GGG | - | chr8.1:79125835-79125854 | None:intergenic | 45.0% | |
TCAATCTGAGAGCGACACAA+CGG | - | chr8.1:79126172-79126191 | None:intergenic | 45.0% | |
TCACAATGTTAGGATGGTGC+AGG | + | chr8.1:79125885-79125904 | MS.gene30357:CDS | 45.0% | |
! | AAGTGGCTTGCCTCTCATTT+GGG | + | chr8.1:79126142-79126161 | MS.gene30357:CDS | 45.0% |
! | TAAGTGGCTTGCCTCTCATT+TGG | + | chr8.1:79126141-79126160 | MS.gene30357:CDS | 45.0% |
!! | TCCAAGAAGACGAAAGCGTT+CGG | + | chr8.1:79126074-79126093 | MS.gene30357:CDS | 45.0% |
AACGAAGCTGATGCTGCACA+AGG | + | chr8.1:79126013-79126032 | MS.gene30357:CDS | 50.0% | |
CAACGGACATCCCAAATGAG+AGG | - | chr8.1:79126155-79126174 | None:intergenic | 50.0% | |
CTCCCTGGGATCATAATCAC+TGG | + | chr8.1:79125830-79125849 | MS.gene30357:CDS | 50.0% | |
GCTCCAGTGATTATGATCCC+AGG | - | chr8.1:79125836-79125855 | None:intergenic | 50.0% | |
TCCGAACGCTTTCGTCTTCT+TGG | - | chr8.1:79126078-79126097 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 79125797 | 79126309 | 79125797 | ID=MS.gene30357 |
chr8.1 | mRNA | 79125797 | 79126309 | 79125797 | ID=MS.gene30357.t1;Parent=MS.gene30357 |
chr8.1 | exon | 79125797 | 79126309 | 79125797 | ID=MS.gene30357.t1.exon1;Parent=MS.gene30357.t1 |
chr8.1 | CDS | 79125797 | 79126309 | 79125797 | ID=cds.MS.gene30357.t1;Parent=MS.gene30357.t1 |
Gene Sequence |
Protein sequence |