Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30522.t1 | BBG98627.1 | 81.1 | 445 | 77 | 2 | 1 | 438 | 1 | 445 | 1.10E-188 | 669.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30522.t1 | P10978 | 32.5 | 456 | 281 | 10 | 7 | 442 | 5 | 453 | 9.5e-59 | 229.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30522.t1 | A0A4Y1R3K4 | 81.1 | 445 | 77 | 2 | 1 | 438 | 1 | 445 | 8.2e-189 | 669.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05615 | MS.gene30522 | 0.839045 | 2.00E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30522.t1 | MTR_2g039140 | 40.217 | 184 | 77 | 2 | 1 | 183 | 120 | 271 | 5.56e-31 | 122 |
| MS.gene30522.t1 | MTR_4g036430 | 89.744 | 39 | 4 | 0 | 1 | 39 | 31 | 69 | 5.46e-19 | 81.6 |
| MS.gene30522.t1 | MTR_1g027280 | 32.667 | 150 | 95 | 2 | 275 | 418 | 103 | 252 | 9.95e-17 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30522.t1 | AT3G29785 | 57.778 | 90 | 37 | 1 | 11 | 100 | 7 | 95 | 2.56e-29 | 112 |
Find 138 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATACCAACTGAACTTAAT+TGG | 0.091541 | 4.4:+41028276 | None:intergenic |
| AATTCTTGAACAATTCTTTC+TGG | 0.139133 | 4.4:+41027766 | None:intergenic |
| CTGAGAACTACAATGATTTC+TGG | 0.181192 | 4.4:+41027992 | None:intergenic |
| TTAGGCCATATGAGTGAAAA+AGG | 0.246871 | 4.4:-41027411 | MS.gene30522:CDS |
| TCATCATCCTTCATCGATTC+TGG | 0.247368 | 4.4:+41028536 | None:intergenic |
| TCTATCGAGTGTTGGAATTA+TGG | 0.251341 | 4.4:-41027960 | MS.gene30522:CDS |
| TTCGCCTCTTGATTCTTTGC+TGG | 0.253882 | 4.4:+41027903 | None:intergenic |
| CTCTGGTCTCTTATTCTAAC+AGG | 0.293382 | 4.4:+41024778 | None:intergenic |
| ACTACAATGATTTCTGGATT+TGG | 0.295920 | 4.4:+41027998 | None:intergenic |
| TGACGCGTTGATATGTTCTT+TGG | 0.328692 | 4.4:-41027844 | MS.gene30522:CDS |
| TGACTGGGGACTCTCATCTA+TGG | 0.342646 | 4.4:+41026480 | None:intergenic |
| AATACCAACTGAACTTAATT+GGG | 0.364604 | 4.4:+41028277 | None:intergenic |
| CTCTCATCTATGGGACTTCC+TGG | 0.364632 | 4.4:+41026490 | None:intergenic |
| TCGCCTCTTGATTCTTTGCT+GGG | 0.374564 | 4.4:+41027904 | None:intergenic |
| CTAGAAGACCTTCTTAGTTC+GGG | 0.376766 | 4.4:+41026394 | None:intergenic |
| ATGGTGCGGACTTTGGCTTT+TGG | 0.377376 | 4.4:-41028622 | MS.gene30522:CDS |
| TCTAGAAGACCTTCTTAGTT+CGG | 0.380530 | 4.4:+41026393 | None:intergenic |
| ATTCTGCCAATTCCTCTGAC+TGG | 0.381706 | 4.4:+41026464 | None:intergenic |
| CAAATGAAAATCCTAATCTA+TGG | 0.386419 | 4.4:-41027443 | MS.gene30522:CDS |
| AATCTCTTGTGCCATAGATT+AGG | 0.388549 | 4.4:+41027432 | None:intergenic |
| AAGTTAAGATTAAGTTGAAT+AGG | 0.390572 | 4.4:-41027674 | MS.gene30522:CDS |
| GAGTCCCCAGTCAGAGGAAT+TGG | 0.391428 | 4.4:-41026470 | MS.gene30522:CDS |
| CATGCTTCATCATAATCTTC+AGG | 0.392057 | 4.4:+41026313 | None:intergenic |
| ATTTCTGGATTTGGATCGTC+TGG | 0.393927 | 4.4:+41028007 | None:intergenic |
| TAGTTTATGTATCTACTGTT+TGG | 0.396515 | 4.4:+41026361 | None:intergenic |
| GACCTTCTTAGTTCGGGAAC+AGG | 0.398484 | 4.4:+41026400 | None:intergenic |
| ATTCTTGAACAATTCTTTCT+GGG | 0.401861 | 4.4:+41027767 | None:intergenic |
| TTCTGCCAATTCCTCTGACT+GGG | 0.401980 | 4.4:+41026465 | None:intergenic |
| TGTCTTCCCTACCAGATAGT+TGG | 0.404400 | 4.4:-41028220 | MS.gene30522:CDS |
| ACAGTAGCGCTCCAACTATC+TGG | 0.408688 | 4.4:+41028209 | None:intergenic |
| TATAACCAGTTGTACTTCTT+CGG | 0.409850 | 4.4:+41025183 | None:intergenic |
| TCTTCCATCTCTACATAAAC+AGG | 0.414467 | 4.4:+41026517 | None:intergenic |
| AGAAATTCAACCAGAGGAAA+TGG | 0.417568 | 4.4:-41028047 | MS.gene30522:CDS |
| TTAAGTTGAATAGGTCTGTA+TGG | 0.425851 | 4.4:-41027665 | MS.gene30522:CDS |
| GTAGAGATGGAAGATGTTCC+AGG | 0.430655 | 4.4:-41026508 | MS.gene30522:CDS |
| AAAGGAGAGATAAAAGTAGA+AGG | 0.430824 | 4.4:-41025242 | MS.gene30522:CDS |
| ATTTGATGATGTTCGTGATC+TGG | 0.433721 | 4.4:-41028147 | MS.gene30522:CDS |
| TGTAGCCTTCGTCAGCCAAC+TGG | 0.439978 | 4.4:+41027586 | None:intergenic |
| GCAAATGTTGCTTCCACCTC+AGG | 0.445655 | 4.4:-41027873 | MS.gene30522:CDS |
| GGAGAGCAAGGAAGAGTCTT+GGG | 0.448480 | 4.4:-41027823 | MS.gene30522:CDS |
| CAGTCTTCCACGGTGATGAT+TGG | 0.449152 | 4.4:-41027560 | MS.gene30522:CDS |
| TACGTAGATGCAGACTTTGC+TGG | 0.450110 | 4.4:-41025218 | MS.gene30522:CDS |
| AAGTTCGATGGTGCGGACTT+TGG | 0.452497 | 4.4:-41028629 | MS.gene30522:CDS |
| GAGATCCGACGAAGAGAGTT+GGG | 0.454617 | 4.4:-41028113 | MS.gene30522:CDS |
| AATCTATGGCACAAGAGATT+AGG | 0.468903 | 4.4:-41027429 | MS.gene30522:CDS |
| TGAACAATCATGTAAGGTTG+TGG | 0.472879 | 4.4:-41027706 | MS.gene30522:CDS |
| TGAACTTTATTTGATGCTGA+AGG | 0.474628 | 4.4:+41028383 | None:intergenic |
| TAAACTTTACCAAGGTTACC+AGG | 0.478940 | 4.4:+41027738 | None:intergenic |
| AAGGAAAACTACCAAGTCTT+CGG | 0.487272 | 4.4:-41027368 | MS.gene30522:intron |
| TTTACCACGTCCATTTCCTC+TGG | 0.487326 | 4.4:+41028037 | None:intergenic |
| AACCTTGGTAAAGTTTACCT+TGG | 0.487612 | 4.4:-41027732 | MS.gene30522:CDS |
| GACTGGGGACTCTCATCTAT+GGG | 0.489221 | 4.4:+41026481 | None:intergenic |
| TGGAAATGAACAATCATGTA+AGG | 0.490322 | 4.4:-41027712 | MS.gene30522:CDS |
| ACCTTTGTTAACATATCTGC+GGG | 0.491781 | 4.4:+41024843 | None:intergenic |
| TTGTTGCAACTGCAATCAAA+TGG | 0.491822 | 4.4:+41027463 | None:intergenic |
| TACATGATTGTTCATTTCCA+AGG | 0.496095 | 4.4:+41027715 | None:intergenic |
| GAACAATCATGTAAGGTTGT+GGG | 0.499830 | 4.4:-41027705 | MS.gene30522:CDS |
| GATCACCGAAGAAGTACAAC+TGG | 0.501627 | 4.4:-41025188 | MS.gene30522:CDS |
| ATGAAGGTTATGCACTCAAA+AGG | 0.501665 | 4.4:-41027387 | MS.gene30522:CDS |
| TGGAGAGCAAGGAAGAGTCT+TGG | 0.501744 | 4.4:-41027824 | MS.gene30522:CDS |
| CTCGCTCAATCCTGAGTCGT+TGG | 0.505380 | 4.4:+41026540 | None:intergenic |
| AACTACATGTTGTTAACTGA+TGG | 0.513907 | 4.4:-41026343 | MS.gene30522:CDS |
| GATGATTGGAAGATTTCAAA+AGG | 0.514140 | 4.4:-41027546 | MS.gene30522:CDS |
| CGCGTCACCTCCTCCTGAGG+TGG | 0.515832 | 4.4:+41027860 | None:intergenic |
| CTTAGTTCGGGAACAGGAGT+AGG | 0.518347 | 4.4:+41026406 | None:intergenic |
| GAGTCTTGGGTGTTAGACTC+TGG | 0.518950 | 4.4:-41027810 | MS.gene30522:CDS |
| AATTATGTCCCTGGTAACCT+TGG | 0.520579 | 4.4:-41027747 | MS.gene30522:CDS |
| ACTGGTTATATATTTACTGT+TGG | 0.525618 | 4.4:-41025170 | MS.gene30522:intron |
| CACAGCTGTGAGTAGCTCCT+CGG | 0.527844 | 4.4:-41028186 | MS.gene30522:CDS |
| ATTTCTATTGACCGAAGACT+TGG | 0.531290 | 4.4:+41027357 | None:intergenic |
| TTCGTCAGCCAACTGGCCTA+CGG | 0.532309 | 4.4:+41027593 | None:intergenic |
| ACAGCTGTGAGTAGCTCCTC+GGG | 0.532462 | 4.4:-41028185 | MS.gene30522:CDS |
| CTTAATCTCCGTAGGCCAGT+TGG | 0.533019 | 4.4:-41027601 | MS.gene30522:CDS |
| AGAGATCCGACGAAGAGAGT+TGG | 0.533075 | 4.4:-41028114 | MS.gene30522:CDS |
| GCTCAATCCTGAGTCGTTGG+TGG | 0.538625 | 4.4:+41026543 | None:intergenic |
| TAGCGCTCCAACTATCTGGT+AGG | 0.539026 | 4.4:+41028213 | None:intergenic |
| AAAGAAACCAGAATCGATGA+AGG | 0.539324 | 4.4:-41028543 | MS.gene30522:CDS |
| CTCCTGTTCCCGAACTAAGA+AGG | 0.541596 | 4.4:-41026402 | MS.gene30522:CDS |
| TGTTGGAATTATGGAAAGAC+GGG | 0.542524 | 4.4:-41027951 | MS.gene30522:CDS |
| TCATGTAAGGTTGTGGGCAA+AGG | 0.547375 | 4.4:-41027699 | MS.gene30522:CDS |
| AACACAACCACCAACGACTC+AGG | 0.547428 | 4.4:-41026550 | MS.gene30522:CDS |
| CGCAGATATGTTAACAAAGG+TGG | 0.548479 | 4.4:-41024841 | MS.gene30522:CDS |
| GGTACTCTTTACAAGACAGC+TGG | 0.550162 | 4.4:-41027492 | MS.gene30522:CDS |
| CAAATAAAGTTCATTTGATG+AGG | 0.550433 | 4.4:-41028373 | MS.gene30522:CDS |
| AACCACCGCTGGTCTTATGA+AGG | 0.557775 | 4.4:-41028429 | MS.gene30522:CDS |
| TAAGTTGAATAGGTCTGTAT+GGG | 0.558149 | 4.4:-41027664 | MS.gene30522:CDS |
| ACTCGAAATCTATCGAGTGT+TGG | 0.561027 | 4.4:-41027968 | MS.gene30522:CDS |
| GTGAAAATTGAAAAGTTCGA+TGG | 0.563926 | 4.4:-41028641 | MS.gene30522:CDS |
| CTCTGTATGCAATACTGAAG+AGG | 0.567853 | 4.4:+41028079 | None:intergenic |
| CGAGCCTGTTTATGTAGAGA+TGG | 0.568091 | 4.4:-41026521 | MS.gene30522:CDS |
| ACAACCCAATTAAGTTCAGT+TGG | 0.568124 | 4.4:-41028281 | MS.gene30522:CDS |
| AAGTTGTGCTCAACTTCAGT+TGG | 0.568559 | 4.4:-41024801 | MS.gene30522:CDS |
| GTTGCTTCCACCTCAGGAGG+AGG | 0.568689 | 4.4:-41027867 | MS.gene30522:CDS |
| GTGTTGGAATTATGGAAAGA+CGG | 0.574820 | 4.4:-41027952 | MS.gene30522:CDS |
| TTTACACTTCGGATGACAGA+AGG | 0.576141 | 4.4:-41028344 | MS.gene30522:CDS |
| TCTGCCAATTCCTCTGACTG+GGG | 0.579510 | 4.4:+41026466 | None:intergenic |
| AAATGTTTGTACTTCAGCAA+AGG | 0.583697 | 4.4:-41025260 | MS.gene30522:CDS |
| AGATGAGAGTCCCCAGTCAG+AGG | 0.585056 | 4.4:-41026476 | MS.gene30522:CDS |
| TTGTTCAAGAATTATGTCCC+TGG | 0.586171 | 4.4:-41027756 | MS.gene30522:CDS |
| CTCCCACTTACTAGCATCCG+TGG | 0.588137 | 4.4:+41026285 | None:intergenic |
| GATGACAGAAGGCGCATCAG+TGG | 0.593273 | 4.4:-41028333 | MS.gene30522:CDS |
| AGCGCTCCAACTATCTGGTA+GGG | 0.594325 | 4.4:+41028214 | None:intergenic |
| GGAACAGGAGTAGGATGCAC+CGG | 0.594422 | 4.4:+41026415 | None:intergenic |
| CACCTTTGTTAACATATCTG+CGG | 0.595625 | 4.4:+41024842 | None:intergenic |
| AAATGGACGTGGTAAATCAA+AGG | 0.596335 | 4.4:-41028030 | MS.gene30522:CDS |
| TGAGGCGGTTGTTTACACTT+CGG | 0.598027 | 4.4:-41028355 | MS.gene30522:CDS |
| GATATGTTCTTTGGAGAGCA+AGG | 0.598084 | 4.4:-41027835 | MS.gene30522:CDS |
| ATAAAGTTCATTTGATGAGG+CGG | 0.598437 | 4.4:-41028370 | MS.gene30522:CDS |
| CTTCTCGATAGACAAGCACT+TGG | 0.601850 | 4.4:-41028506 | MS.gene30522:CDS |
| AATGTTGCTTCCACCTCAGG+AGG | 0.603928 | 4.4:-41027870 | MS.gene30522:CDS |
| AATCGATGAAGGATGATGAG+TGG | 0.606445 | 4.4:-41028532 | MS.gene30522:CDS |
| AATTGAAAAGTTCGATGGTG+CGG | 0.608192 | 4.4:-41028636 | MS.gene30522:CDS |
| GGCTACACAACAGTCTTCCA+CGG | 0.609498 | 4.4:-41027570 | MS.gene30522:CDS |
| TGGTATTGAATTTGACGATG+AGG | 0.610535 | 4.4:-41028261 | MS.gene30522:CDS |
| ATTCACCCAACTCTCTTCGT+CGG | 0.611639 | 4.4:+41028108 | None:intergenic |
| CAAGTGCTTGTCTATCGAGA+AGG | 0.612004 | 4.4:+41028507 | None:intergenic |
| GGATGCACCGGTGTGTCAGA+CGG | 0.613881 | 4.4:+41026427 | None:intergenic |
| TATGGCTGCAGACGAAGGAA+AGG | 0.614378 | 4.4:-41028663 | MS.gene30522:CDS |
| TTCCAAGGTAAACTTTACCA+AGG | 0.615217 | 4.4:+41027730 | None:intergenic |
| TACATGTTGTTAACTGATGG+AGG | 0.616383 | 4.4:-41026340 | MS.gene30522:CDS |
| GGAGTTATGGCTGCAGACGA+AGG | 0.617375 | 4.4:-41028668 | None:intergenic |
| AGCCTTCATAAGACCAGCGG+TGG | 0.620835 | 4.4:+41028427 | None:intergenic |
| GAATCAAGAGGCGAAAGATG+AGG | 0.623736 | 4.4:-41027895 | MS.gene30522:CDS |
| GCAAAAGAGAAAACCACCGC+TGG | 0.626545 | 4.4:-41028440 | MS.gene30522:CDS |
| CAACGCGTCACCTCCTCCTG+AGG | 0.630580 | 4.4:+41027857 | None:intergenic |
| CAGACAACCGTCTGACACAC+CGG | 0.642310 | 4.4:-41026434 | MS.gene30522:CDS |
| AGAGGAAGAAATTCAACCAG+AGG | 0.643795 | 4.4:-41028053 | MS.gene30522:CDS |
| AAACTTTACCAAGGTTACCA+GGG | 0.648516 | 4.4:+41027739 | None:intergenic |
| ATAGCTCGCGGTAGAAAGAG+TGG | 0.649534 | 4.4:-41027513 | MS.gene30522:CDS |
| GTAGGCCAGTTGGCTGACGA+AGG | 0.651906 | 4.4:-41027591 | MS.gene30522:CDS |
| TCCCGCAGATATGTTAACAA+AGG | 0.657588 | 4.4:-41024844 | MS.gene30522:CDS |
| TCAACCAGAGGAAATGGACG+TGG | 0.665050 | 4.4:-41028041 | MS.gene30522:CDS |
| GCTCCCAGCAAAGAATCAAG+AGG | 0.671318 | 4.4:-41027907 | MS.gene30522:CDS |
| AAATCTTCCAATCATCACCG+TGG | 0.678539 | 4.4:+41027553 | None:intergenic |
| GTATTGCATACAGAGTCAAG+AGG | 0.682691 | 4.4:-41028071 | MS.gene30522:CDS |
| TGATGAAGCATGTCAGACCA+CGG | 0.691661 | 4.4:-41026302 | MS.gene30522:CDS |
| AAGAGCCTTCATAAGACCAG+CGG | 0.707222 | 4.4:+41028424 | None:intergenic |
| GGTGCAATGACGATAGCTCG+CGG | 0.741901 | 4.4:-41027525 | MS.gene30522:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTAAGATTAAGTTGAAT+AGG | - | chr4.4:41025776-41025795 | MS.gene30522:intron | 20.0% |
| ! | AATACCAACTGAACTTAATT+GGG | + | chr4.4:41025176-41025195 | None:intergenic | 25.0% |
| ! | AATTCTTGAACAATTCTTTC+TGG | + | chr4.4:41025687-41025706 | None:intergenic | 25.0% |
| ! | ACTGGTTATATATTTACTGT+TGG | - | chr4.4:41028280-41028299 | MS.gene30522:CDS | 25.0% |
| ! | ATTCTTGAACAATTCTTTCT+GGG | + | chr4.4:41025686-41025705 | None:intergenic | 25.0% |
| ! | CAAATAAAGTTCATTTGATG+AGG | - | chr4.4:41025077-41025096 | MS.gene30522:intron | 25.0% |
| ! | CAAATGAAAATCCTAATCTA+TGG | - | chr4.4:41026007-41026026 | MS.gene30522:intron | 25.0% |
| ! | CTAACATTGATCAAAATTCA+AGG | - | chr4.4:41028574-41028593 | MS.gene30522:CDS | 25.0% |
| ! | TAGTTTATGTATCTACTGTT+TGG | + | chr4.4:41027092-41027111 | None:intergenic | 25.0% |
| ! | TATATATTTACTGTTGGTAC+TGG | - | chr4.4:41028286-41028305 | MS.gene30522:CDS | 25.0% |
| AAAGAATTGATATGGCTTCA+AGG | - | chr4.4:41028394-41028413 | MS.gene30522:CDS | 30.0% | |
| AAAGGAGAGATAAAAGTAGA+AGG | - | chr4.4:41028208-41028227 | MS.gene30522:CDS | 30.0% | |
| AAATGTTTGTACTTCAGCAA+AGG | - | chr4.4:41028190-41028209 | MS.gene30522:CDS | 30.0% | |
| AACTACATGTTGTTAACTGA+TGG | - | chr4.4:41027107-41027126 | MS.gene30522:intron | 30.0% | |
| AAGCTAGCAAAGAATTGATA+TGG | - | chr4.4:41028386-41028405 | MS.gene30522:CDS | 30.0% | |
| AGAAAAAGGGAAAGAGAATA+TGG | - | chr4.4:41027538-41027557 | MS.gene30522:CDS | 30.0% | |
| ATAAAATACCAGAAGAGGTA+TGG | - | chr4.4:41026649-41026668 | MS.gene30522:intron | 30.0% | |
| ATAAAGTTCATTTGATGAGG+CGG | - | chr4.4:41025080-41025099 | MS.gene30522:intron | 30.0% | |
| ATATGTGAAGACTGTATACT+TGG | - | chr4.4:41026120-41026139 | MS.gene30522:intron | 30.0% | |
| CAATACCAACTGAACTTAAT+TGG | + | chr4.4:41025177-41025196 | None:intergenic | 30.0% | |
| GATGATTGGAAGATTTCAAA+AGG | - | chr4.4:41025904-41025923 | MS.gene30522:intron | 30.0% | |
| GGATGATGAAAACAAAAAGA+TGG | - | chr4.4:41026824-41026843 | MS.gene30522:intron | 30.0% | |
| GTAGCAAAACTTCTTGAATT+TGG | + | chr4.4:41026433-41026452 | None:intergenic | 30.0% | |
| GTGAAAATTGAAAAGTTCGA+TGG | - | chr4.4:41024809-41024828 | MS.gene30522:CDS | 30.0% | |
| TACATGATTGTTCATTTCCA+AGG | + | chr4.4:41025738-41025757 | None:intergenic | 30.0% | |
| TAGAAGGATTCTCAGAAAAA+GGG | - | chr4.4:41027525-41027544 | MS.gene30522:CDS | 30.0% | |
| TATAACCAGTTGTACTTCTT+CGG | + | chr4.4:41028270-41028289 | None:intergenic | 30.0% | |
| TATGTGCATATTAGTGATCA+AGG | - | chr4.4:41026723-41026742 | MS.gene30522:intron | 30.0% | |
| TGGAAATGAACAATCATGTA+AGG | - | chr4.4:41025738-41025757 | MS.gene30522:intron | 30.0% | |
| TGTTGAATCTTTGCAAAACA+CGG | + | chr4.4:41027904-41027923 | None:intergenic | 30.0% | |
| TTTGATCTCAAATCAGACAT+GGG | - | chr4.4:41027214-41027233 | MS.gene30522:intron | 30.0% | |
| ! | ACTACAATGATTTCTGGATT+TGG | + | chr4.4:41025455-41025474 | None:intergenic | 30.0% |
| ! | GTTTTGCAAAGATTCAACAT+GGG | - | chr4.4:41027905-41027924 | MS.gene30522:CDS | 30.0% |
| ! | TAAGTTGAATAGGTCTGTAT+GGG | - | chr4.4:41025786-41025805 | MS.gene30522:intron | 30.0% |
| ! | TATTTGAAGCTTTCAAGAGA+TGG | - | chr4.4:41026331-41026350 | MS.gene30522:CDS | 30.0% |
| ! | TGAACTTTATTTGATGCTGA+AGG | + | chr4.4:41025070-41025089 | None:intergenic | 30.0% |
| ! | TGTTTTGCAAAGATTCAACA+TGG | - | chr4.4:41027904-41027923 | MS.gene30522:CDS | 30.0% |
| !! | TTAAGTTGAATAGGTCTGTA+TGG | - | chr4.4:41025785-41025804 | MS.gene30522:intron | 30.0% |
| AAACTTTACCAAGGTTACCA+GGG | + | chr4.4:41025714-41025733 | None:intergenic | 35.0% | |
| AAAGAAACCAGAATCGATGA+AGG | - | chr4.4:41024907-41024926 | MS.gene30522:intron | 35.0% | |
| AAAGAGTGATGTACAAAGAC+AGG | - | chr4.4:41026874-41026893 | MS.gene30522:intron | 35.0% | |
| AAAGTGCACTTCTTGGATTT+GGG | + | chr4.4:41026765-41026784 | None:intergenic | 35.0% | |
| AAATCCAGGTAAAGCTCATT+GGG | - | chr4.4:41028123-41028142 | MS.gene30522:CDS | 35.0% | |
| AAATGGACGTGGTAAATCAA+AGG | - | chr4.4:41025420-41025439 | MS.gene30522:intron | 35.0% | |
| AACCTTGGTAAAGTTTACCT+TGG | - | chr4.4:41025718-41025737 | MS.gene30522:intron | 35.0% | |
| AAGGAAAACTACCAAGTCTT+CGG | - | chr4.4:41026082-41026101 | MS.gene30522:intron | 35.0% | |
| AATCTATGGCACAAGAGATT+AGG | - | chr4.4:41026021-41026040 | MS.gene30522:intron | 35.0% | |
| AATCTCTTGTGCCATAGATT+AGG | + | chr4.4:41026021-41026040 | None:intergenic | 35.0% | |
| AATTGAAAAGTTCGATGGTG+CGG | - | chr4.4:41024814-41024833 | MS.gene30522:CDS | 35.0% | |
| ACAACCCAATTAAGTTCAGT+TGG | - | chr4.4:41025169-41025188 | MS.gene30522:intron | 35.0% | |
| ACCTTTGTTAACATATCTGC+GGG | + | chr4.4:41028610-41028629 | None:intergenic | 35.0% | |
| ACGAAAAACTTAATCTCCGT+AGG | - | chr4.4:41025841-41025860 | MS.gene30522:intron | 35.0% | |
| AGAAATTCAACCAGAGGAAA+TGG | - | chr4.4:41025403-41025422 | MS.gene30522:intron | 35.0% | |
| AGACTTCATTTCGTCTTTCA+TGG | + | chr4.4:41027195-41027214 | None:intergenic | 35.0% | |
| AGGTTAAAGAAGAGCTTGTA+TGG | - | chr4.4:41027566-41027585 | MS.gene30522:CDS | 35.0% | |
| ATATACATGCACCAACTAGA+AGG | - | chr4.4:41027509-41027528 | MS.gene30522:CDS | 35.0% | |
| ATCACGAGAGATAAGCAAAA+AGG | - | chr4.4:41027845-41027864 | MS.gene30522:CDS | 35.0% | |
| ATCTCTTGAAGAAGCAACAA+TGG | + | chr4.4:41027673-41027692 | None:intergenic | 35.0% | |
| ATGAAGGTTATGCACTCAAA+AGG | - | chr4.4:41026063-41026082 | MS.gene30522:intron | 35.0% | |
| ATTCCATATGCTTCAGCAAT+TGG | - | chr4.4:41028025-41028044 | MS.gene30522:CDS | 35.0% | |
| ATTTCTATTGACCGAAGACT+TGG | + | chr4.4:41026096-41026115 | None:intergenic | 35.0% | |
| CAAGGATTGTTAACAGAGTT+AGG | - | chr4.4:41028412-41028431 | MS.gene30522:CDS | 35.0% | |
| CACCTTTGTTAACATATCTG+CGG | + | chr4.4:41028611-41028630 | None:intergenic | 35.0% | |
| CATGCTTCATCATAATCTTC+AGG | + | chr4.4:41027140-41027159 | None:intergenic | 35.0% | |
| CTAGAAGGATTCTCAGAAAA+AGG | - | chr4.4:41027524-41027543 | MS.gene30522:CDS | 35.0% | |
| CTGAGAACTACAATGATTTC+TGG | + | chr4.4:41025461-41025480 | None:intergenic | 35.0% | |
| CTTTGATCTCAAATCAGACA+TGG | - | chr4.4:41027213-41027232 | MS.gene30522:intron | 35.0% | |
| GAACAATCATGTAAGGTTGT+GGG | - | chr4.4:41025745-41025764 | MS.gene30522:intron | 35.0% | |
| GAAGTACAAACATTTCTCTG+TGG | + | chr4.4:41028185-41028204 | None:intergenic | 35.0% | |
| GACACTTCAAAAATCAGTGT+AGG | - | chr4.4:41025521-41025540 | MS.gene30522:intron | 35.0% | |
| GAGTTTGACATGAAGGATTT+AGG | - | chr4.4:41027794-41027813 | MS.gene30522:CDS | 35.0% | |
| GTCAAAAGAGTTTGACATGA+AGG | - | chr4.4:41027787-41027806 | MS.gene30522:CDS | 35.0% | |
| GTGAAAACTGCATTTCTTCA+TGG | - | chr4.4:41027470-41027489 | MS.gene30522:CDS | 35.0% | |
| GTGTTGGAATTATGGAAAGA+CGG | - | chr4.4:41025498-41025517 | MS.gene30522:intron | 35.0% | |
| TAAACTTTACCAAGGTTACC+AGG | + | chr4.4:41025715-41025734 | None:intergenic | 35.0% | |
| TACATGTTGTTAACTGATGG+AGG | - | chr4.4:41027110-41027129 | MS.gene30522:intron | 35.0% | |
| TAGGCCATATGAGTGAAAAA+GGG | - | chr4.4:41026040-41026059 | MS.gene30522:intron | 35.0% | |
| TATGAGTGAAAAAGGGATGA+AGG | - | chr4.4:41026047-41026066 | MS.gene30522:intron | 35.0% | |
| TCTAGAAGACCTTCTTAGTT+CGG | + | chr4.4:41027060-41027079 | None:intergenic | 35.0% | |
| TCTTCATGGAGACTTAAATG+AGG | - | chr4.4:41027484-41027503 | MS.gene30522:CDS | 35.0% | |
| TCTTCCATCTCTACATAAAC+AGG | + | chr4.4:41026936-41026955 | None:intergenic | 35.0% | |
| TGAACAATCATGTAAGGTTG+TGG | - | chr4.4:41025744-41025763 | MS.gene30522:intron | 35.0% | |
| TGTTGGAATTATGGAAAGAC+GGG | - | chr4.4:41025499-41025518 | MS.gene30522:intron | 35.0% | |
| TTAGGCCATATGAGTGAAAA+AGG | - | chr4.4:41026039-41026058 | MS.gene30522:intron | 35.0% | |
| TTCATATTCACCACCATTGT+CGG | + | chr4.4:41026406-41026425 | None:intergenic | 35.0% | |
| TTCCAAGGTAAACTTTACCA+AGG | + | chr4.4:41025723-41025742 | None:intergenic | 35.0% | |
| TTGTTCAAGAATTATGTCCC+TGG | - | chr4.4:41025694-41025713 | MS.gene30522:intron | 35.0% | |
| TTGTTGCAACTGCAATCAAA+TGG | + | chr4.4:41025990-41026009 | None:intergenic | 35.0% | |
| ! | ATTAAGTTTTTCGTGAGGTC+GGG | + | chr4.4:41025835-41025854 | None:intergenic | 35.0% |
| ! | CTCTCACATCTTAGAGTTTT+CGG | - | chr4.4:41026690-41026709 | MS.gene30522:intron | 35.0% |
| ! | CTTTTATCGATGATCACTCT+AGG | - | chr4.4:41026271-41026290 | MS.gene30522:intron | 35.0% |
| ! | GATTAAGTTTTTCGTGAGGT+CGG | + | chr4.4:41025836-41025855 | None:intergenic | 35.0% |
| ! | TCTGGTATTTTATGCTCCAA+TGG | + | chr4.4:41026642-41026661 | None:intergenic | 35.0% |
| ! | TGGTATTGAATTTGACGATG+AGG | - | chr4.4:41025189-41025208 | MS.gene30522:CDS | 35.0% |
| ! | TTTCTGAGAATCCTTCTAGT+TGG | + | chr4.4:41027523-41027542 | None:intergenic | 35.0% |
| !! | AAGCGGTTAAATGGATTTTG+AGG | - | chr4.4:41028146-41028165 | MS.gene30522:CDS | 35.0% |
| !! | ATTTGATGATGTTCGTGATC+TGG | - | chr4.4:41025303-41025322 | MS.gene30522:intron | 35.0% |
| !! | GTTGATGATATGTTAGTAGC+AGG | - | chr4.4:41027725-41027744 | MS.gene30522:CDS | 35.0% |
| !! | TCATCCCTTTTTCACTCATA+TGG | + | chr4.4:41026047-41026066 | None:intergenic | 35.0% |
| !! | TCTATCGAGTGTTGGAATTA+TGG | - | chr4.4:41025490-41025509 | MS.gene30522:intron | 35.0% |
| !!! | TGGATTTTGAGGTATCTAAG+AGG | - | chr4.4:41028157-41028176 | MS.gene30522:CDS | 35.0% |
| !!! | TTTTGTTTTCATCATCCCAG+AGG | + | chr4.4:41026821-41026840 | None:intergenic | 35.0% |
| AAAAAGCTCAGAACCGACAA+TGG | - | chr4.4:41026390-41026409 | MS.gene30522:CDS | 40.0% | |
| AAATCTTCCAATCATCACCG+TGG | + | chr4.4:41025900-41025919 | None:intergenic | 40.0% | |
| AACAGAGTTAGGATTCATGC+AGG | - | chr4.4:41028423-41028442 | MS.gene30522:CDS | 40.0% | |
| AACTTCATATACCACTGCCT+TGG | + | chr4.4:41027605-41027624 | None:intergenic | 40.0% | |
| AAGAAAAAGAACTCATGGCC+AGG | - | chr4.4:41028002-41028021 | MS.gene30522:CDS | 40.0% | |
| AAGTGGAAGAATCCCAAAGA+AGG | - | chr4.4:41026170-41026189 | MS.gene30522:intron | 40.0% | |
| AAGTTGTGCTCAACTTCAGT+TGG | - | chr4.4:41028649-41028668 | MS.gene30522:CDS | 40.0% | |
| AATCGATGAAGGATGATGAG+TGG | - | chr4.4:41024918-41024937 | MS.gene30522:intron | 40.0% | |
| AATTATGTCCCTGGTAACCT+TGG | - | chr4.4:41025703-41025722 | MS.gene30522:intron | 40.0% | |
| ACTCGAAATCTATCGAGTGT+TGG | - | chr4.4:41025482-41025501 | MS.gene30522:intron | 40.0% | |
| AGAGGAAGAAATTCAACCAG+AGG | - | chr4.4:41025397-41025416 | MS.gene30522:intron | 40.0% | |
| AGCAGGTTTATGTCAAATCC+AGG | - | chr4.4:41028109-41028128 | MS.gene30522:CDS | 40.0% | |
| AGCTCAAGTTTCTCCTTCTT+TGG | + | chr4.4:41026186-41026205 | None:intergenic | 40.0% | |
| AGGCTTACCAAAGAACTTCT+GGG | - | chr4.4:41026566-41026585 | MS.gene30522:intron | 40.0% | |
| CAAATCCAGGTAAAGCTCAT+TGG | - | chr4.4:41028122-41028141 | MS.gene30522:CDS | 40.0% | |
| CAAATGGGTGTATCGAGTAA+AGG | - | chr4.4:41027277-41027296 | MS.gene30522:intron | 40.0% | |
| CATTCGAGAACAAAGCACAT+AGG | - | chr4.4:41028508-41028527 | MS.gene30522:CDS | 40.0% | |
| CGCAGATATGTTAACAAAGG+TGG | - | chr4.4:41028609-41028628 | MS.gene30522:CDS | 40.0% | |
| CTAGAAGACCTTCTTAGTTC+GGG | + | chr4.4:41027059-41027078 | None:intergenic | 40.0% | |
| CTCTGTATGCAATACTGAAG+AGG | + | chr4.4:41025374-41025393 | None:intergenic | 40.0% | |
| CTTCATCAGATCTCTTCTTG+AGG | - | chr4.4:41028543-41028562 | MS.gene30522:CDS | 40.0% | |
| CTTCCAATTGCTGAAGCATA+TGG | + | chr4.4:41028031-41028050 | None:intergenic | 40.0% | |
| CTTGAAGAAGCAACAATGGT+CGG | + | chr4.4:41027669-41027688 | None:intergenic | 40.0% | |
| CTTGTTCACTCTGATGTTTG+GGG | - | chr4.4:41026204-41026223 | MS.gene30522:intron | 40.0% | |
| GAGGTGATTGTTCTTGAGAT+AGG | + | chr4.4:41027973-41027992 | None:intergenic | 40.0% | |
| GCTCAAGTTTCTCCTTCTTT+GGG | + | chr4.4:41026185-41026204 | None:intergenic | 40.0% | |
| GCTTGTTCACTCTGATGTTT+GGG | - | chr4.4:41026203-41026222 | MS.gene30522:intron | 40.0% | |
| GGAGCATAAAATACCAGAAG+AGG | - | chr4.4:41026644-41026663 | MS.gene30522:intron | 40.0% | |
| GGAGGAAGAAAAAGAACTCA+TGG | - | chr4.4:41027997-41028016 | MS.gene30522:CDS | 40.0% | |
| GGTCAGGCAAAGAAAATTCT+TGG | - | chr4.4:41027815-41027834 | MS.gene30522:CDS | 40.0% | |
| GGTTATGGTGAAGATGAGTT+TGG | - | chr4.4:41026789-41026808 | MS.gene30522:intron | 40.0% | |
| GTATTGCATACAGAGTCAAG+AGG | - | chr4.4:41025379-41025398 | MS.gene30522:intron | 40.0% | |
| GTTTGAAAGCTTCATGCACA+AGG | - | chr4.4:41027622-41027641 | MS.gene30522:CDS | 40.0% | |
| TCAAGAACAATCACCTCAGA+CGG | - | chr4.4:41027976-41027995 | MS.gene30522:CDS | 40.0% | |
| TCAGCTTACTTAATCAACCG+AGG | - | chr4.4:41026606-41026625 | MS.gene30522:intron | 40.0% | |
| TCCCGCAGATATGTTAACAA+AGG | - | chr4.4:41028606-41028625 | MS.gene30522:CDS | 40.0% | |
| TGACATGAAGGATTTAGGTC+AGG | - | chr4.4:41027799-41027818 | MS.gene30522:CDS | 40.0% | |
| TGAGTTACCCATAGGAAAGA+AGG | - | chr4.4:41027244-41027263 | MS.gene30522:intron | 40.0% | |
| TGGAAGTTTGATGTACGCAA+TGG | - | chr4.4:41028045-41028064 | MS.gene30522:CDS | 40.0% | |
| TGGTGAAGCTCAATACTATC+AGG | - | chr4.4:41027396-41027415 | MS.gene30522:CDS | 40.0% | |
| TGTATCTCTTAGAGCCATCA+TGG | + | chr4.4:41027307-41027326 | None:intergenic | 40.0% | |
| TTTACACTTCGGATGACAGA+AGG | - | chr4.4:41025106-41025125 | MS.gene30522:intron | 40.0% | |
| TTTCAAGAGATGGAAAGCCA+TGG | - | chr4.4:41026341-41026360 | MS.gene30522:CDS | 40.0% | |
| ! | AAGAAGTTTTGCTACGAGCA+CGG | - | chr4.4:41026438-41026457 | MS.gene30522:CDS | 40.0% |
| ! | AAGTGCACTTTCATCGGTTA+TGG | - | chr4.4:41026774-41026793 | MS.gene30522:intron | 40.0% |
| ! | ACTTGTCTCATTTTCCACCA+TGG | + | chr4.4:41026361-41026380 | None:intergenic | 40.0% |
| ! | AGCTTGTTCACTCTGATGTT+TGG | - | chr4.4:41026202-41026221 | MS.gene30522:intron | 40.0% |
| ! | ATAGTATTGAGCTTCACCAC+TGG | + | chr4.4:41027395-41027414 | None:intergenic | 40.0% |
| ! | ATGATCACTCTAGGAAGGTA+TGG | - | chr4.4:41026280-41026299 | MS.gene30522:intron | 40.0% |
| ! | ATTTCTGGATTTGGATCGTC+TGG | + | chr4.4:41025446-41025465 | None:intergenic | 40.0% |
| ! | CGGAGATTAAGTTTTTCGTG+AGG | + | chr4.4:41025840-41025859 | None:intergenic | 40.0% |
| ! | CTCAAGATAGAGATTTTCGC+TGG | + | chr4.4:41027441-41027460 | None:intergenic | 40.0% |
| ! | GAAAGTGCACTTCTTGGATT+TGG | + | chr4.4:41026766-41026785 | None:intergenic | 40.0% |
| ! | GATATGTTCTTTGGAGAGCA+AGG | - | chr4.4:41025615-41025634 | MS.gene30522:intron | 40.0% |
| ! | TATCGATGATCACTCTAGGA+AGG | - | chr4.4:41026275-41026294 | MS.gene30522:intron | 40.0% |
| ! | TCCAAGAAGTGCACTTTCAT+CGG | - | chr4.4:41026768-41026787 | MS.gene30522:intron | 40.0% |
| ! | TGAAGTGCCTTCTTTCCTAT+GGG | + | chr4.4:41027254-41027273 | None:intergenic | 40.0% |
| ! | TGACGCGTTGATATGTTCTT+TGG | - | chr4.4:41025606-41025625 | MS.gene30522:intron | 40.0% |
| ! | TGATCACTCTAGGAAGGTAT+GGG | - | chr4.4:41026281-41026300 | MS.gene30522:intron | 40.0% |
| ! | TTTCATCTTTTTGCTTCCCG+AGG | + | chr4.4:41025284-41025303 | None:intergenic | 40.0% |
| !! | AGAAGGCACTTCACAACAAA+TGG | - | chr4.4:41027261-41027280 | MS.gene30522:intron | 40.0% |
| !! | GAAGGCACTTCACAACAAAT+GGG | - | chr4.4:41027262-41027281 | MS.gene30522:intron | 40.0% |
| !! | TCATCATCCTTCATCGATTC+TGG | + | chr4.4:41024917-41024936 | None:intergenic | 40.0% |
| !! | TCTGGTTTCTTTTCTGTGAG+AGG | + | chr4.4:41024899-41024918 | None:intergenic | 40.0% |
| AAAGGATTCCAGCAGAAGGA+AGG | - | chr4.4:41027344-41027363 | MS.gene30522:intron | 45.0% | |
| AAGAGCCTTCATAAGACCAG+CGG | + | chr4.4:41025029-41025048 | None:intergenic | 45.0% | |
| AATGCTTCCCACCAATGGAT+GGG | + | chr4.4:41026242-41026261 | None:intergenic | 45.0% | |
| AGAGTCAGCTTTCAGACAAG+TGG | - | chr4.4:41026153-41026172 | MS.gene30522:intron | 45.0% | |
| AGGTAAAGCTCATTGGGAAG+CGG | - | chr4.4:41028129-41028148 | MS.gene30522:CDS | 45.0% | |
| AGTCAATTCCTTCCTTCTGC+TGG | + | chr4.4:41027355-41027374 | None:intergenic | 45.0% | |
| ATGCAGTGGGAGTTATTAGC+AGG | - | chr4.4:41028092-41028111 | MS.gene30522:CDS | 45.0% | |
| ATGGGTGTATCGAGTAAAGG+AGG | - | chr4.4:41027280-41027299 | MS.gene30522:intron | 45.0% | |
| ATTCACCCAACTCTCTTCGT+CGG | + | chr4.4:41025345-41025364 | None:intergenic | 45.0% | |
| ATTCTGCCAATTCCTCTGAC+TGG | + | chr4.4:41026989-41027008 | None:intergenic | 45.0% | |
| CAAGTGCTTGTCTATCGAGA+AGG | + | chr4.4:41024946-41024965 | None:intergenic | 45.0% | |
| CACCACTGGAGCAAAAATCT+CGG | + | chr4.4:41027381-41027400 | None:intergenic | 45.0% | |
| CAGATCTCTTCTTGAGGATG+AGG | - | chr4.4:41028549-41028568 | MS.gene30522:CDS | 45.0% | |
| CAGGCTTACCAAAGAACTTC+TGG | - | chr4.4:41026565-41026584 | MS.gene30522:intron | 45.0% | |
| CGAGCCTGTTTATGTAGAGA+TGG | - | chr4.4:41026929-41026948 | MS.gene30522:intron | 45.0% | |
| CTCAGCTACACCATTGTGTT+GGG | + | chr4.4:41026496-41026515 | None:intergenic | 45.0% | |
| CTCATTGGGAAGCGGTTAAA+TGG | - | chr4.4:41028137-41028156 | MS.gene30522:CDS | 45.0% | |
| CTGGCACAGTTCTTTCCATT+CGG | + | chr4.4:41026467-41026486 | None:intergenic | 45.0% | |
| CTTAATCAACCGAGGTCCAT+CGG | - | chr4.4:41026614-41026633 | MS.gene30522:intron | 45.0% | |
| CTTCTCGATAGACAAGCACT+TGG | - | chr4.4:41024944-41024963 | MS.gene30522:intron | 45.0% | |
| GAAAGCTTCATGCACAAGGA+AGG | - | chr4.4:41027626-41027645 | MS.gene30522:CDS | 45.0% | |
| GAAGTAATGCTTCCCACCAA+TGG | + | chr4.4:41026247-41026266 | None:intergenic | 45.0% | |
| GAATCAAGAGGCGAAAGATG+AGG | - | chr4.4:41025555-41025574 | MS.gene30522:intron | 45.0% | |
| GAATCCTTTGACCACTAGTC+GGG | + | chr4.4:41027333-41027352 | None:intergenic | 45.0% | |
| GGAAAGAGAATATGGTGTGC+AGG | - | chr4.4:41027546-41027565 | MS.gene30522:CDS | 45.0% | |
| GGAATCCTTTGACCACTAGT+CGG | + | chr4.4:41027334-41027353 | None:intergenic | 45.0% | |
| GGTACTCTTTACAAGACAGC+TGG | - | chr4.4:41025958-41025977 | MS.gene30522:intron | 45.0% | |
| GTAGAGATGGAAGATGTTCC+AGG | - | chr4.4:41026942-41026961 | MS.gene30522:intron | 45.0% | |
| TAATGCTTCCCACCAATGGA+TGG | + | chr4.4:41026243-41026262 | None:intergenic | 45.0% | |
| TACATACTCAGCCTCTGTAG+TGG | + | chr4.4:41028356-41028375 | None:intergenic | 45.0% | |
| TACGTAGATGCAGACTTTGC+TGG | - | chr4.4:41028232-41028251 | MS.gene30522:CDS | 45.0% | |
| TAGTCAGAGTGCGATACATC+TGG | - | chr4.4:41028468-41028487 | MS.gene30522:CDS | 45.0% | |
| TCAGCTACACCATTGTGTTG+GGG | + | chr4.4:41026495-41026514 | None:intergenic | 45.0% | |
| TCATGTAAGGTTGTGGGCAA+AGG | - | chr4.4:41025751-41025770 | MS.gene30522:intron | 45.0% | |
| TCGCCTCTTGATTCTTTGCT+GGG | + | chr4.4:41025549-41025568 | None:intergenic | 45.0% | |
| TGAGGCGGTTGTTTACACTT+CGG | - | chr4.4:41025095-41025114 | MS.gene30522:intron | 45.0% | |
| TGATGAAGCATGTCAGACCA+CGG | - | chr4.4:41027148-41027167 | MS.gene30522:intron | 45.0% | |
| TGCTAATAACTCCCACTGCA+TGG | + | chr4.4:41028093-41028112 | None:intergenic | 45.0% | |
| TGCTGAAGCATATGGAATCC+TGG | + | chr4.4:41028023-41028042 | None:intergenic | 45.0% | |
| TGTCTTCCCTACCAGATAGT+TGG | - | chr4.4:41025230-41025249 | MS.gene30522:CDS | 45.0% | |
| TTCGCCTCTTGATTCTTTGC+TGG | + | chr4.4:41025550-41025569 | None:intergenic | 45.0% | |
| TTCTGCCAATTCCTCTGACT+GGG | + | chr4.4:41026988-41027007 | None:intergenic | 45.0% | |
| TTTACCACGTCCATTTCCTC+TGG | + | chr4.4:41025416-41025435 | None:intergenic | 45.0% | |
| TTTCCACTCCATACCTCTTC+TGG | + | chr4.4:41026660-41026679 | None:intergenic | 45.0% | |
| ! | ACCGATGAAAGTGCACTTCT+TGG | + | chr4.4:41026772-41026791 | None:intergenic | 45.0% |
| ! | AGAAGTTTTGCTACGAGCAC+GGG | - | chr4.4:41026439-41026458 | MS.gene30522:CDS | 45.0% |
| ! | AGAGGTATGGAGTGGAAAAG+AGG | - | chr4.4:41026662-41026681 | MS.gene30522:intron | 45.0% |
| ! | AGGCGAAAATGACTTGCCAA+CGG | + | chr4.4:41027953-41027972 | None:intergenic | 45.0% |
| ! | ATACCAGAAGAGGTATGGAG+TGG | - | chr4.4:41026654-41026673 | MS.gene30522:intron | 45.0% |
| ! | GATCACCGAAGAAGTACAAC+TGG | - | chr4.4:41028262-41028281 | MS.gene30522:CDS | 45.0% |
| ! | GTGAAGTGCCTTCTTTCCTA+TGG | + | chr4.4:41027255-41027274 | None:intergenic | 45.0% |
| ! | TCTTTTTCTTCCTCCGTCTG+AGG | + | chr4.4:41027992-41028011 | None:intergenic | 45.0% |
| ! | TGTTTTCATCATCCCAGAGG+CGG | + | chr4.4:41026818-41026837 | None:intergenic | 45.0% |
| ! | TTGGTACTGGAGCAGTTAGT+TGG | - | chr4.4:41028299-41028318 | MS.gene30522:CDS | 45.0% |
| !! | TGTCGCTTTATCCACTACAG+AGG | - | chr4.4:41028342-41028361 | MS.gene30522:CDS | 45.0% |
| AAAGCCCGACTAGTGGTCAA+AGG | - | chr4.4:41027326-41027345 | MS.gene30522:intron | 50.0% | |
| AACACAACCACCAACGACTC+AGG | - | chr4.4:41026900-41026919 | MS.gene30522:intron | 50.0% | |
| AAGCTCAGAACCGACAATGG+TGG | - | chr4.4:41026393-41026412 | MS.gene30522:CDS | 50.0% | |
| AAGTTCGATGGTGCGGACTT+TGG | - | chr4.4:41024821-41024840 | MS.gene30522:CDS | 50.0% | |
| AATGGTCGGCATTGCACTTC+TGG | + | chr4.4:41027655-41027674 | None:intergenic | 50.0% | |
| ACAACAGTCCCATCCATTGG+TGG | - | chr4.4:41026231-41026250 | MS.gene30522:intron | 50.0% | |
| ACAGTAGCGCTCCAACTATC+TGG | + | chr4.4:41025244-41025263 | None:intergenic | 50.0% | |
| AGAACAATCACCTCAGACGG+AGG | - | chr4.4:41027979-41027998 | MS.gene30522:CDS | 50.0% | |
| AGACCACGGATGCTAGTAAG+TGG | - | chr4.4:41027162-41027181 | MS.gene30522:intron | 50.0% | |
| AGAGATCCGACGAAGAGAGT+TGG | - | chr4.4:41025336-41025355 | MS.gene30522:intron | 50.0% | |
| AGAGTGCGATACATCTGGCA+AGG | - | chr4.4:41028473-41028492 | MS.gene30522:CDS | 50.0% | |
| AGCGCTCCAACTATCTGGTA+GGG | + | chr4.4:41025239-41025258 | None:intergenic | 50.0% | |
| ATAGCTCGCGGTAGAAAGAG+TGG | - | chr4.4:41025937-41025956 | MS.gene30522:intron | 50.0% | |
| ATGGCCTGAAACAAGCTCCA+AGG | - | chr4.4:41027585-41027604 | MS.gene30522:CDS | 50.0% | |
| CAAATCGGTTAGCACACCGT+TGG | - | chr4.4:41027934-41027953 | MS.gene30522:CDS | 50.0% | |
| CAACAGTCCCATCCATTGGT+GGG | - | chr4.4:41026232-41026251 | MS.gene30522:intron | 50.0% | |
| CAACATGGGCGATGCCAAAT+CGG | - | chr4.4:41027919-41027938 | MS.gene30522:CDS | 50.0% | |
| CAACGGTGTGCTAACCGATT+TGG | + | chr4.4:41027936-41027955 | None:intergenic | 50.0% | |
| CAAGAGATGGAAAGCCATGG+TGG | - | chr4.4:41026344-41026363 | MS.gene30522:CDS | 50.0% | |
| CAGTCTTCCACGGTGATGAT+TGG | - | chr4.4:41025890-41025909 | MS.gene30522:intron | 50.0% | |
| CCAACAACAGTCCCATCCAT+TGG | - | chr4.4:41026228-41026247 | MS.gene30522:intron | 50.0% | |
| CCAATGGATGGGACTGTTGT+TGG | + | chr4.4:41026231-41026250 | None:intergenic | 50.0% | |
| CGAATGGAAAGAACTGTGCC+AGG | - | chr4.4:41026465-41026484 | MS.gene30522:CDS | 50.0% | |
| CGAGTAAAGGAGGACCATGA+TGG | - | chr4.4:41027290-41027309 | MS.gene30522:intron | 50.0% | |
| CTCCTGTTCCCGAACTAAGA+AGG | - | chr4.4:41027048-41027067 | MS.gene30522:intron | 50.0% | |
| CTCTCATCTATGGGACTTCC+TGG | + | chr4.4:41026963-41026982 | None:intergenic | 50.0% | |
| CTTAATCTCCGTAGGCCAGT+TGG | - | chr4.4:41025849-41025868 | MS.gene30522:intron | 50.0% | |
| CTTAGTTCGGGAACAGGAGT+AGG | + | chr4.4:41027047-41027066 | None:intergenic | 50.0% | |
| GACCACGGATGCTAGTAAGT+GGG | - | chr4.4:41027163-41027182 | MS.gene30522:intron | 50.0% | |
| GACCTTCTTAGTTCGGGAAC+AGG | + | chr4.4:41027053-41027072 | None:intergenic | 50.0% | |
| GACTGGGGACTCTCATCTAT+GGG | + | chr4.4:41026972-41026991 | None:intergenic | 50.0% | |
| GAGATACAAAGCCCGACTAG+TGG | - | chr4.4:41027319-41027338 | MS.gene30522:intron | 50.0% | |
| GAGATCCGACGAAGAGAGTT+GGG | - | chr4.4:41025337-41025356 | MS.gene30522:intron | 50.0% | |
| GAGCTAGCTGAGTTACCCAT+AGG | - | chr4.4:41027236-41027255 | MS.gene30522:intron | 50.0% | |
| GAGTCTTGGGTGTTAGACTC+TGG | - | chr4.4:41025640-41025659 | MS.gene30522:intron | 50.0% | |
| GCAAAAGAGAAAACCACCGC+TGG | - | chr4.4:41025010-41025029 | MS.gene30522:intron | 50.0% | |
| GCTCAGCTACACCATTGTGT+TGG | + | chr4.4:41026497-41026516 | None:intergenic | 50.0% | |
| GCTCCCAGCAAAGAATCAAG+AGG | - | chr4.4:41025543-41025562 | MS.gene30522:intron | 50.0% | |
| GCTTCCCAATGAGCTTTACC+TGG | + | chr4.4:41028130-41028149 | None:intergenic | 50.0% | |
| GCTTCTGCCCAGAAGTTCTT+TGG | + | chr4.4:41026576-41026595 | None:intergenic | 50.0% | |
| GGAGAGCAAGGAAGAGTCTT+GGG | - | chr4.4:41025627-41025646 | MS.gene30522:intron | 50.0% | |
| GGCTACACAACAGTCTTCCA+CGG | - | chr4.4:41025880-41025899 | MS.gene30522:intron | 50.0% | |
| GGTCAAAGGATTCCAGCAGA+AGG | - | chr4.4:41027340-41027359 | MS.gene30522:intron | 50.0% | |
| TAGCGCTCCAACTATCTGGT+AGG | + | chr4.4:41025240-41025259 | None:intergenic | 50.0% | |
| TCAACCAGAGGAAATGGACG+TGG | - | chr4.4:41025409-41025428 | MS.gene30522:intron | 50.0% | |
| TCTGCCAATTCCTCTGACTG+GGG | + | chr4.4:41026987-41027006 | None:intergenic | 50.0% | |
| TGAAACAAGCTCCAAGGCAG+TGG | - | chr4.4:41027591-41027610 | MS.gene30522:CDS | 50.0% | |
| TGACTGGGGACTCTCATCTA+TGG | + | chr4.4:41026973-41026992 | None:intergenic | 50.0% | |
| TGGAGAGCAAGGAAGAGTCT+TGG | - | chr4.4:41025626-41025645 | MS.gene30522:intron | 50.0% | |
| TGTACGCAATGGTCTGTACG+AGG | - | chr4.4:41028056-41028075 | MS.gene30522:CDS | 50.0% | |
| ! | AATGTTGCTTCCACCTCAGG+AGG | - | chr4.4:41025580-41025599 | MS.gene30522:intron | 50.0% |
| ! | ACTGCCTTGGAGCTTGTTTC+AGG | + | chr4.4:41027592-41027611 | None:intergenic | 50.0% |
| ! | CACCGAGATTTTTGCTCCAG+TGG | - | chr4.4:41027376-41027395 | MS.gene30522:CDS | 50.0% |
| ! | GCAAATGTTGCTTCCACCTC+AGG | - | chr4.4:41025577-41025596 | MS.gene30522:intron | 50.0% |
| ! | TTATGCTCCAATGGCACCGA+TGG | + | chr4.4:41026633-41026652 | None:intergenic | 50.0% |
| !! | AACCACCGCTGGTCTTATGA+AGG | - | chr4.4:41025021-41025040 | MS.gene30522:intron | 50.0% |
| !!! | ATGGTGCGGACTTTGGCTTT+TGG | - | chr4.4:41024828-41024847 | MS.gene30522:CDS | 50.0% |
| ACAGCTGTGAGTAGCTCCTC+GGG | - | chr4.4:41025265-41025284 | MS.gene30522:CDS | 55.0% | |
| AGAAGCTTGCGTGTGCAGTC+AGG | - | chr4.4:41026546-41026565 | MS.gene30522:CDS | 55.0% | |
| AGATGAGAGTCCCCAGTCAG+AGG | - | chr4.4:41026974-41026993 | MS.gene30522:intron | 55.0% | |
| AGCCTTCATAAGACCAGCGG+TGG | + | chr4.4:41025026-41025045 | None:intergenic | 55.0% | |
| ATGAGTTTGGCTACCGCCTC+TGG | - | chr4.4:41026802-41026821 | MS.gene30522:intron | 55.0% | |
| CACAGCTGTGAGTAGCTCCT+CGG | - | chr4.4:41025264-41025283 | MS.gene30522:CDS | 55.0% | |
| CAGACAACCGTCTGACACAC+CGG | - | chr4.4:41027016-41027035 | MS.gene30522:intron | 55.0% | |
| CCAGACATTGGCCATGCAGT+GGG | - | chr4.4:41028079-41028098 | MS.gene30522:CDS | 55.0% | |
| CCAGGTACTCCCCAACACAA+TGG | - | chr4.4:41026483-41026502 | MS.gene30522:CDS | 55.0% | |
| CTCCCACTTACTAGCATCCG+TGG | + | chr4.4:41027168-41027187 | None:intergenic | 55.0% | |
| CTCGCTCAATCCTGAGTCGT+TGG | + | chr4.4:41026913-41026932 | None:intergenic | 55.0% | |
| GAGTCCCCAGTCAGAGGAAT+TGG | - | chr4.4:41026980-41026999 | MS.gene30522:intron | 55.0% | |
| GCTCAATCCTGAGTCGTTGG+TGG | + | chr4.4:41026910-41026929 | None:intergenic | 55.0% | |
| GGAACAGGAGTAGGATGCAC+CGG | + | chr4.4:41027038-41027057 | None:intergenic | 55.0% | |
| GGTGCAATGACGATAGCTCG+CGG | - | chr4.4:41025925-41025944 | MS.gene30522:intron | 55.0% | |
| GTCTGTACGAGGCCAGACAT+TGG | - | chr4.4:41028067-41028086 | MS.gene30522:CDS | 55.0% | |
| TGACTGCACACGCAAGCTTC+TGG | + | chr4.4:41026547-41026566 | None:intergenic | 55.0% | |
| TGAGTTTGGCTACCGCCTCT+GGG | - | chr4.4:41026803-41026822 | MS.gene30522:intron | 55.0% | |
| TGTAGCCTTCGTCAGCCAAC+TGG | + | chr4.4:41025867-41025886 | None:intergenic | 55.0% | |
| ! | GATGACAGAAGGCGCATCAG+TGG | - | chr4.4:41025117-41025136 | MS.gene30522:intron | 55.0% |
| ! | TTCGTCAGCCAACTGGCCTA+CGG | + | chr4.4:41025860-41025879 | None:intergenic | 55.0% |
| !! | CCATTGTGTTGGGGAGTACC+TGG | + | chr4.4:41026486-41026505 | None:intergenic | 55.0% |
| CCCACTGCATGGCCAATGTC+TGG | + | chr4.4:41028082-41028101 | None:intergenic | 60.0% | |
| CTACGAGCACGGGATCCGAA+TGG | - | chr4.4:41026449-41026468 | MS.gene30522:CDS | 60.0% | |
| GCCAGACATTGGCCATGCAG+TGG | - | chr4.4:41028078-41028097 | MS.gene30522:CDS | 60.0% | |
| GTAGGCCAGTTGGCTGACGA+AGG | - | chr4.4:41025859-41025878 | MS.gene30522:intron | 60.0% | |
| GTTGCTTCCACCTCAGGAGG+AGG | - | chr4.4:41025583-41025602 | MS.gene30522:intron | 60.0% | |
| ! | GGATGCACCGGTGTGTCAGA+CGG | + | chr4.4:41027026-41027045 | None:intergenic | 60.0% |
| !! | CCAATGGCACCGATGGACCT+CGG | + | chr4.4:41026626-41026645 | None:intergenic | 60.0% |
| CAACGCGTCACCTCCTCCTG+AGG | + | chr4.4:41025596-41025615 | None:intergenic | 65.0% | |
| !! | CCGAGGTCCATCGGTGCCAT+TGG | - | chr4.4:41026623-41026642 | MS.gene30522:intron | 65.0% |
| CGCGTCACCTCCTCCTGAGG+TGG | + | chr4.4:41025593-41025612 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 41024788 | 41028684 | 41024788 | ID=MS.gene30522 |
| chr4.4 | mRNA | 41024788 | 41028684 | 41024788 | ID=MS.gene30522.t1;Parent=MS.gene30522 |
| chr4.4 | exon | 41027369 | 41028684 | 41027369 | ID=MS.gene30522.t1.exon1;Parent=MS.gene30522.t1 |
| chr4.4 | CDS | 41027369 | 41028684 | 41027369 | ID=cds.MS.gene30522.t1;Parent=MS.gene30522.t1 |
| chr4.4 | exon | 41026296 | 41026576 | 41026296 | ID=MS.gene30522.t1.exon2;Parent=MS.gene30522.t1 |
| chr4.4 | CDS | 41026296 | 41026576 | 41026296 | ID=cds.MS.gene30522.t1;Parent=MS.gene30522.t1 |
| chr4.4 | exon | 41025171 | 41025284 | 41025171 | ID=MS.gene30522.t1.exon3;Parent=MS.gene30522.t1 |
| chr4.4 | CDS | 41025171 | 41025284 | 41025171 | ID=cds.MS.gene30522.t1;Parent=MS.gene30522.t1 |
| chr4.4 | exon | 41024788 | 41024876 | 41024788 | ID=MS.gene30522.t1.exon4;Parent=MS.gene30522.t1 |
| chr4.4 | CDS | 41024788 | 41024876 | 41024788 | ID=cds.MS.gene30522.t1;Parent=MS.gene30522.t1 |
| Gene Sequence |
| Protein sequence |
