Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30527.t1 | KEH30214.1 | 94.4 | 486 | 25 | 1 | 1 | 486 | 1 | 484 | 5.60E-271 | 943 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30527.t1 | O51625 | 44.1 | 365 | 190 | 7 | 71 | 434 | 1 | 352 | 6.6e-95 | 349.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30527.t1 | A0A072UKD4 | 94.4 | 486 | 25 | 1 | 1 | 486 | 1 | 484 | 4.1e-271 | 943.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058833 | MS.gene30527 | 0.813294 | 2.75E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30527.t1 | MTR_4g065023 | 94.444 | 486 | 25 | 1 | 1 | 486 | 1 | 484 | 0.0 | 947 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30527.t1 | AT1G51310 | 77.804 | 428 | 90 | 3 | 57 | 484 | 69 | 491 | 0.0 | 695 |
Find 121 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTTCTGGTGTAATTT+TGG | 0.192938 | 4.4:-41119140 | MS.gene30527:CDS |
| CACACTTCTTGCAGGTTATC+TGG | 0.237723 | 4.4:+41119013 | None:intergenic |
| GAATCCTTTCTATCTTTATT+TGG | 0.260617 | 4.4:+41120394 | None:intergenic |
| TTCATTTGACCGATGAATAT+TGG | 0.267209 | 4.4:-41121750 | MS.gene30527:CDS |
| GGTTTAGTTTGCGGAGGTTT+TGG | 0.274402 | 4.4:+41122772 | None:intergenic |
| GTCAAAGGAAAAGTAATTTC+TGG | 0.277431 | 4.4:+41119493 | None:intergenic |
| GAATTTGTTGCAAGACATAT+TGG | 0.295559 | 4.4:-41120064 | MS.gene30527:CDS |
| CTGCTTTCTACCTTAAGATA+TGG | 0.295813 | 4.4:-41122539 | MS.gene30527:CDS |
| TTGGCAAACATCGGGGCTTC+TGG | 0.299286 | 4.4:-41119997 | MS.gene30527:CDS |
| GGCATGGAACAGCGGAGATA+TGG | 0.322908 | 4.4:+41122657 | None:intergenic |
| GACCTGGCTGCAAACGTCTT+TGG | 0.336923 | 4.4:+41122337 | None:intergenic |
| TGCAATACAAGAATAAAGTT+TGG | 0.340032 | 4.4:-41121205 | MS.gene30527:intron |
| CGGAATCACACACTTCTTGC+AGG | 0.341928 | 4.4:+41119005 | None:intergenic |
| TCCAGTATGCGCAAAAGCTT+TGG | 0.358828 | 4.4:-41119095 | MS.gene30527:CDS |
| AGATGGGGAAGCGGAGATTA+GGG | 0.358941 | 4.4:+41122751 | None:intergenic |
| ATTGGCAAGTAAAGCATCAT+AGG | 0.370643 | 4.4:-41118978 | None:intergenic |
| GAGATGGGGAAGCGGAGATT+AGG | 0.372453 | 4.4:+41122750 | None:intergenic |
| CTACGATTGTAGCTTAGAAA+TGG | 0.381122 | 4.4:-41119269 | MS.gene30527:CDS |
| ATGGAAGATAAATCAAAGAT+TGG | 0.387486 | 4.4:-41119061 | MS.gene30527:CDS |
| TAAAGATAGAAAGGATTCTC+AGG | 0.389915 | 4.4:-41120389 | MS.gene30527:CDS |
| AGATTTCCTTGGCAAACATC+GGG | 0.393126 | 4.4:-41120005 | MS.gene30527:CDS |
| AATTTGTTGCAAGACATATT+GGG | 0.401161 | 4.4:-41120063 | MS.gene30527:CDS |
| CCATCCATCTCATCTGCAAA+TGG | 0.404286 | 4.4:+41120992 | None:intergenic |
| TTTGGATGCAATTGGTGGTA+TGG | 0.406131 | 4.4:-41121059 | MS.gene30527:CDS |
| AAATGGCAGCGCGGTTGAAC+TGG | 0.412868 | 4.4:-41122833 | MS.gene30527:CDS |
| CGCCAGGGTCTACGGCTACC+TGG | 0.419218 | 4.4:-41119956 | MS.gene30527:CDS |
| GCTTCAGCTGGGACTGAGAT+AGG | 0.421345 | 4.4:+41120654 | None:intergenic |
| CTCCGGCTTCTTCATGCTGC+CGG | 0.422213 | 4.4:-41122573 | MS.gene30527:CDS |
| GGAGATTAGGGTTTAGTTTG+CGG | 0.422531 | 4.4:+41122763 | None:intergenic |
| TTGGATGCAATTGGTGGTAT+GGG | 0.426807 | 4.4:-41121058 | MS.gene30527:CDS |
| AGTGTGTGATTCCGCAGAAT+TGG | 0.430127 | 4.4:-41118996 | MS.gene30527:CDS |
| GATGATCAAGGCCTAGCAGC+TGG | 0.432897 | 4.4:-41119196 | MS.gene30527:CDS |
| CTTGTATTGCAAAGAACATC+CGG | 0.435203 | 4.4:+41121217 | None:intergenic |
| GCATGTTCTTCCCTCATAGA+AGG | 0.435501 | 4.4:+41119162 | None:intergenic |
| GTCAAATGAACAACTTCTAA+TGG | 0.437140 | 4.4:+41121763 | None:intergenic |
| TCCACTTGGTTCTATTCCCA+AGG | 0.437553 | 4.4:-41120621 | MS.gene30527:intron |
| AGAAGGTGAAGGTGAAGGTA+AGG | 0.441784 | 4.4:+41122698 | None:intergenic |
| CCTACATCATTGAAGAGTAT+AGG | 0.445194 | 4.4:-41121258 | MS.gene30527:CDS |
| GTGTGGTCGAACTCCGAATC+CGG | 0.446590 | 4.4:-41121236 | MS.gene30527:CDS |
| GGAAGAACATGCATTGGTTC+TGG | 0.448272 | 4.4:-41119151 | MS.gene30527:CDS |
| TGCATCGAAGCTGACTTCTC+TGG | 0.455195 | 4.4:+41119411 | None:intergenic |
| TTGCAAAGAACATCCGGATT+CGG | 0.462280 | 4.4:+41121223 | None:intergenic |
| GAGATTTCCTTGGCAAACAT+CGG | 0.466787 | 4.4:-41120006 | MS.gene30527:CDS |
| GGGACTGAGATAGGTGTGAT+AGG | 0.470335 | 4.4:+41120663 | None:intergenic |
| ATACTTGGAACCATATCTTA+AGG | 0.474173 | 4.4:+41122529 | None:intergenic |
| TGGAAGATAAATCAAAGATT+GGG | 0.477501 | 4.4:-41119060 | MS.gene30527:CDS |
| CTGTGAACTGCCCAGCTGCT+AGG | 0.480633 | 4.4:+41119185 | None:intergenic |
| GAGTGGCTTCGCCTGCGGCA+TGG | 0.482579 | 4.4:+41122641 | None:intergenic |
| TGGTGTGTGAAGTGAGATAG+AGG | 0.483413 | 4.4:+41122792 | None:intergenic |
| GCATGGAACAGCGGAGATAT+GGG | 0.493552 | 4.4:+41122658 | None:intergenic |
| GCGGAGATATGGGTCGAGTT+CGG | 0.495250 | 4.4:+41122668 | None:intergenic |
| AGCTTTGGAAATTGCACGAA+TGG | 0.495586 | 4.4:-41119080 | MS.gene30527:CDS |
| TGTAGCTTAGAAATGGAACT+TGG | 0.500072 | 4.4:-41119262 | MS.gene30527:CDS |
| TGCCAAAGACGTTTGCAGCC+AGG | 0.501877 | 4.4:-41122339 | MS.gene30527:intron |
| TCTACCAAATAAAGATAGAA+AGG | 0.504703 | 4.4:-41120398 | MS.gene30527:CDS |
| CATCCATCTCATCTGCAAAT+GGG | 0.509454 | 4.4:+41120993 | None:intergenic |
| CCACCCATTTGCAGATGAGA+TGG | 0.509813 | 4.4:-41120996 | MS.gene30527:CDS |
| TTATACTATTGGTCAACGCC+AGG | 0.512411 | 4.4:-41119972 | MS.gene30527:CDS |
| CCTATACTCTTCAATGATGT+AGG | 0.515602 | 4.4:+41121258 | None:intergenic |
| GGAGAAAGAAGGTATCATAC+TGG | 0.516143 | 4.4:-41120041 | MS.gene30527:CDS |
| AGGACAAACCATGGACCTCC+AGG | 0.518014 | 4.4:+41119938 | None:intergenic |
| GCTGAGACGGGAGATTTCCT+TGG | 0.524925 | 4.4:-41120016 | MS.gene30527:CDS |
| TTGGTCAACGCCAGGGTCTA+CGG | 0.528709 | 4.4:-41119964 | MS.gene30527:CDS |
| ATCATACTGGAAGCTGAGAC+GGG | 0.529666 | 4.4:-41120028 | MS.gene30527:CDS |
| AAAGGCGCATATTCCGTGTC+GGG | 0.531134 | 4.4:-41119466 | MS.gene30527:CDS |
| GACCGGCAGCATGAAGAAGC+CGG | 0.531818 | 4.4:+41122571 | None:intergenic |
| TTGACAGCAGCGTTGCTCTC+CGG | 0.533165 | 4.4:-41122590 | MS.gene30527:CDS |
| GAGAAGTCAGCTTCGATGCA+AGG | 0.540790 | 4.4:-41119408 | MS.gene30527:intron |
| GAAAGCAGTGCAAGAATGAC+CGG | 0.545314 | 4.4:+41122554 | None:intergenic |
| TATCATACTGGAAGCTGAGA+CGG | 0.551422 | 4.4:-41120029 | MS.gene30527:CDS |
| TATGAGGGAAGAACATGCAT+TGG | 0.551622 | 4.4:-41119157 | MS.gene30527:CDS |
| GCAGTTCACAGCCTTCTATG+AGG | 0.552825 | 4.4:-41119173 | MS.gene30527:CDS |
| CGAAGCTGACTTCTCTGGCT+AGG | 0.553259 | 4.4:+41119416 | None:intergenic |
| ATTTGTTGCAAGACATATTG+GGG | 0.559794 | 4.4:-41120062 | MS.gene30527:CDS |
| TTGAGAGAAGGTGAAGGTGA+AGG | 0.559848 | 4.4:+41122693 | None:intergenic |
| ATCTGCAGGATGAAGTCCGC+AGG | 0.561896 | 4.4:-41120438 | MS.gene30527:intron |
| AGACATATTGGGGAGAAAGA+AGG | 0.564121 | 4.4:-41120052 | MS.gene30527:CDS |
| TACGGCTACCTGGAGGTCCA+TGG | 0.565169 | 4.4:-41119946 | MS.gene30527:intron |
| ATGCAGGTATGTTGTTGAGA+AGG | 0.566844 | 4.4:-41119543 | MS.gene30527:intron |
| CACTGATAAGAACCGCGACT+CGG | 0.570351 | 4.4:+41122619 | None:intergenic |
| TCTCCGCTGTTCCATGCCGC+AGG | 0.573665 | 4.4:-41122652 | MS.gene30527:CDS |
| TGTGATAGTTCTAGAGCAGA+AGG | 0.575470 | 4.4:+41120968 | None:intergenic |
| CAGTTCACAGCCTTCTATGA+GGG | 0.575987 | 4.4:-41119172 | MS.gene30527:CDS |
| CTCCAGGTAGCCGTAGACCC+TGG | 0.576527 | 4.4:+41119954 | None:intergenic |
| TGGAAAACTTTGATCATCCC+CGG | 0.577452 | 4.4:+41119114 | None:intergenic |
| CGCATATCTGAAGATGATCA+AGG | 0.577500 | 4.4:-41119208 | MS.gene30527:CDS |
| TGCTTTACTTGCCAATTCTG+CGG | 0.578853 | 4.4:+41118985 | None:intergenic |
| TGCCTCTGGGCATTATGCAA+AGG | 0.585153 | 4.4:-41121023 | MS.gene30527:CDS |
| TATACTATTGGTCAACGCCA+GGG | 0.586094 | 4.4:-41119971 | MS.gene30527:CDS |
| GGCGAAGCCACTCCGAGTCG+CGG | 0.586155 | 4.4:-41122631 | MS.gene30527:CDS |
| TTGGCAAGTAAAGCATCATA+GGG | 0.588703 | 4.4:-41118977 | None:intergenic |
| ATGATCAAGGCCTAGCAGCT+GGG | 0.590945 | 4.4:-41119195 | MS.gene30527:CDS |
| CCATTTGCAGATGAGATGGA+TGG | 0.598580 | 4.4:-41120992 | MS.gene30527:CDS |
| TCGAGTTCGGCATTGAGAGA+AGG | 0.601659 | 4.4:+41122681 | None:intergenic |
| AGCTGACTTCTCTGGCTAGG+AGG | 0.606523 | 4.4:+41119419 | None:intergenic |
| GCCATTTAAAAGACCCGACA+CGG | 0.606660 | 4.4:+41119453 | None:intergenic |
| AAAAGGCGCATATTCCGTGT+CGG | 0.607494 | 4.4:-41119467 | MS.gene30527:CDS |
| ACTCGGAGTGGCTTCGCCTG+CGG | 0.610142 | 4.4:+41122636 | None:intergenic |
| TCGCCTGCGGCATGGAACAG+CGG | 0.617704 | 4.4:+41122649 | None:intergenic |
| GTCGCGGTTCTTATCAGTGG+CGG | 0.618466 | 4.4:-41122615 | MS.gene30527:CDS |
| GATTAGGGTTTAGTTTGCGG+AGG | 0.618826 | 4.4:+41122766 | None:intergenic |
| AAAGATAGAAAGGATTCTCA+GGG | 0.620229 | 4.4:-41120388 | MS.gene30527:CDS |
| GGTGTGTGAAGTGAGATAGA+GGG | 0.621517 | 4.4:+41122793 | None:intergenic |
| CCATCTCATCTGCAAATGGG+TGG | 0.623548 | 4.4:+41120996 | None:intergenic |
| CGAGTCGCGGTTCTTATCAG+TGG | 0.625706 | 4.4:-41122618 | MS.gene30527:CDS |
| AGAAGCCCCGATGTTTGCCA+AGG | 0.626987 | 4.4:+41119999 | None:intergenic |
| TACTTCAAATCATCTTCCCA+AGG | 0.627784 | 4.4:+41122362 | None:intergenic |
| ATAAGAACCGCGACTCGGAG+TGG | 0.630843 | 4.4:+41122624 | None:intergenic |
| ATCATTGAAGAGTATAGGTG+TGG | 0.645225 | 4.4:-41121253 | MS.gene30527:CDS |
| AGGTAAGGTTTGAAGAGAAG+CGG | 0.646216 | 4.4:+41122713 | None:intergenic |
| GATTTCCTTGGCAAACATCG+GGG | 0.658683 | 4.4:-41120004 | MS.gene30527:CDS |
| TCGGCATTGAGAGAAGGTGA+AGG | 0.662169 | 4.4:+41122687 | None:intergenic |
| CTTGATCATCTTCAGATATG+CGG | 0.670803 | 4.4:+41119209 | None:intergenic |
| TAAGCTACAATCGTAGAACA+CGG | 0.685925 | 4.4:+41119276 | None:intergenic |
| AAGCTACAATCGTAGAACAC+GGG | 0.687382 | 4.4:+41119277 | None:intergenic |
| TCTAGAACTATCACAAGACA+CGG | 0.705464 | 4.4:-41120960 | MS.gene30527:intron |
| CAGGGTCTACGGCTACCTGG+AGG | 0.712205 | 4.4:-41119953 | MS.gene30527:CDS |
| AACCTTTGCATAATGCCCAG+AGG | 0.738468 | 4.4:+41121021 | None:intergenic |
| ACCTTGGGAATAGAACCAAG+TGG | 0.740645 | 4.4:+41120620 | None:intergenic |
| GATAGAGGGAGAGAACAGAG+TGG | 0.762082 | 4.4:+41122807 | None:intergenic |
| AGATGTTGAAAATGGCAGCG+CGG | 0.795890 | 4.4:-41122842 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATATATATTTTTTAATT+AGG | - | chr4.4:41119357-41119376 | MS.gene30527:intron | 0.0% |
| !! | AACTTAAAATTCTAGTAAAA+TGG | + | chr4.4:41120137-41120156 | None:intergenic | 15.0% |
| !! | TAAAAATAAAATGACACTTA+TGG | - | chr4.4:41121571-41121590 | MS.gene30527:intron | 15.0% |
| !! | TTAGTTTAAACAATTAACTT+AGG | + | chr4.4:41120986-41121005 | None:intergenic | 15.0% |
| !! | TTATAGAAATAATCTGAAAA+CGG | + | chr4.4:41120292-41120311 | None:intergenic | 15.0% |
| !!! | ATTTTTAACTTAAATCAATC+TGG | + | chr4.4:41119571-41119590 | None:intergenic | 15.0% |
| !!! | CATATAAATATGTTTTTCTT+TGG | + | chr4.4:41121030-41121049 | None:intergenic | 15.0% |
| !!! | TTTAACTTTGAACAAAATAA+TGG | + | chr4.4:41121654-41121673 | None:intergenic | 15.0% |
| !!! | TTTGACTTTATTTTATGTTT+TGG | - | chr4.4:41120361-41120380 | MS.gene30527:intron | 15.0% |
| !!! | TTTTTAATTAGGATGAAATT+GGG | - | chr4.4:41119368-41119387 | MS.gene30527:intron | 15.0% |
| !!! | TTTTTTAATTAGGATGAAAT+TGG | - | chr4.4:41119367-41119386 | MS.gene30527:intron | 15.0% |
| !! | ATCAAACATTGAAATAGATA+TGG | + | chr4.4:41121493-41121512 | None:intergenic | 20.0% |
| !! | ATGCTTATCATCTATAAATA+AGG | - | chr4.4:41122062-41122081 | MS.gene30527:intron | 20.0% |
| !! | ATTAGTAGAAAATCATTGTT+AGG | - | chr4.4:41121061-41121080 | MS.gene30527:CDS | 20.0% |
| !! | TTAAACTATTTATCCAAACA+TGG | - | chr4.4:41120430-41120449 | MS.gene30527:CDS | 20.0% |
| !!! | AAAATTGATTTTGATTGCAT+TGG | - | chr4.4:41119540-41119559 | MS.gene30527:CDS | 20.0% |
| !!! | AATAAAATGTTTTTCCTGTT+AGG | - | chr4.4:41120722-41120741 | MS.gene30527:intron | 20.0% |
| !!! | ACAAAATCAATTTTTGTCAT+TGG | - | chr4.4:41119931-41119950 | MS.gene30527:intron | 20.0% |
| !!! | ATAAATATGTTTTTCTTTGG+AGG | + | chr4.4:41121027-41121046 | None:intergenic | 20.0% |
| !!! | ATTTTTACACTCAAAATTTC+CGG | + | chr4.4:41119611-41119630 | None:intergenic | 20.0% |
| !!! | GTATTTATTTCATTGTTTTC+AGG | - | chr4.4:41120016-41120035 | MS.gene30527:CDS | 20.0% |
| !!! | TGATTTTGTAAGATTGATTA+TGG | + | chr4.4:41119920-41119939 | None:intergenic | 20.0% |
| ! | AAAATGAAATAGGACATACT+TGG | + | chr4.4:41119299-41119318 | None:intergenic | 25.0% |
| ! | AAACACAACAAACAACAATT+TGG | + | chr4.4:41120656-41120675 | None:intergenic | 25.0% |
| ! | AGAATGTTTGAGAGAATTTA+TGG | - | chr4.4:41120239-41120258 | MS.gene30527:intron | 25.0% |
| ! | ATGGAAGATAAATCAAAGAT+TGG | - | chr4.4:41122749-41122768 | MS.gene30527:CDS | 25.0% |
| ! | CGAATGCAAAAAAATGAAAT+AGG | + | chr4.4:41119309-41119328 | None:intergenic | 25.0% |
| ! | GAATCCTTTCTATCTTTATT+TGG | + | chr4.4:41121419-41121438 | None:intergenic | 25.0% |
| ! | GTTAATTCGAAATTCCAAAT+AGG | + | chr4.4:41120184-41120203 | None:intergenic | 25.0% |
| ! | TAGAACATGTTCATTAACTT+AGG | + | chr4.4:41120456-41120475 | None:intergenic | 25.0% |
| ! | TAGCTTCAATAAATAAGTTC+TGG | + | chr4.4:41119782-41119801 | None:intergenic | 25.0% |
| ! | TATATCACTACATGATGTTA+TGG | - | chr4.4:41121313-41121332 | MS.gene30527:intron | 25.0% |
| ! | TCTACCAAATAAAGATAGAA+AGG | - | chr4.4:41121412-41121431 | MS.gene30527:intron | 25.0% |
| ! | TGCAATACAAGAATAAAGTT+TGG | - | chr4.4:41120605-41120624 | MS.gene30527:intron | 25.0% |
| ! | TGGAAGATAAATCAAAGATT+GGG | - | chr4.4:41122750-41122769 | MS.gene30527:CDS | 25.0% |
| ! | TTGACAGAACTAAACTTTAT+AGG | - | chr4.4:41120158-41120177 | MS.gene30527:intron | 25.0% |
| !! | ACTTTTCCTTTGACAAAAAA+AGG | - | chr4.4:41122326-41122345 | MS.gene30527:intron | 25.0% |
| !! | ATGATTTTCTACTAATGTAC+AGG | + | chr4.4:41121057-41121076 | None:intergenic | 25.0% |
| !! | CAATATGAGATATACTTTTG+TGG | - | chr4.4:41120876-41120895 | MS.gene30527:intron | 25.0% |
| !! | CACAAAAGTATATCTCATAT+TGG | + | chr4.4:41120878-41120897 | None:intergenic | 25.0% |
| !! | TTTTTACACTCAAAATTTCC+GGG | + | chr4.4:41119610-41119629 | None:intergenic | 25.0% |
| !!! | AATTTGTTGCAAGACATATT+GGG | - | chr4.4:41121747-41121766 | MS.gene30527:CDS | 25.0% |
| !!! | ATTGATTTTAACTAGAAGGT+AGG | + | chr4.4:41119652-41119671 | None:intergenic | 25.0% |
| !!! | ATTTCGTTTAACTTTTTCAG+AGG | - | chr4.4:41121246-41121265 | MS.gene30527:CDS | 25.0% |
| !!! | GAGAATTGATTTTAACTAGA+AGG | + | chr4.4:41119656-41119675 | None:intergenic | 25.0% |
| !!! | GGTTTAACTTTTATCTTAAC+TGG | + | chr4.4:41122779-41122798 | None:intergenic | 25.0% |
| !!! | TACTTTTTGTCATTTTATGC+AGG | - | chr4.4:41122251-41122270 | MS.gene30527:intron | 25.0% |
| AAAGATAGAAAGGATTCTCA+GGG | - | chr4.4:41121422-41121441 | MS.gene30527:intron | 30.0% | |
| AAATGTGACAGGAAATTCAT+CGG | + | chr4.4:41121932-41121951 | None:intergenic | 30.0% | |
| AACCAAACACACACTAAATA+AGG | + | chr4.4:41119509-41119528 | None:intergenic | 30.0% | |
| AATAAGGATAGTTTAGAGAG+TGG | - | chr4.4:41122078-41122097 | MS.gene30527:intron | 30.0% | |
| ACATGCTATAGTTTCTAATG+TGG | - | chr4.4:41121091-41121110 | MS.gene30527:intron | 30.0% | |
| ATAAGGATATGAAAAAGACC+TGG | + | chr4.4:41119492-41119511 | None:intergenic | 30.0% | |
| ATACTTGGAACCATATCTTA+AGG | + | chr4.4:41119284-41119303 | None:intergenic | 30.0% | |
| CAATTAATGCAGGAAAGAAA+AGG | + | chr4.4:41121902-41121921 | None:intergenic | 30.0% | |
| CGACTAAAAATCAATTCTAG+AGG | + | chr4.4:41119821-41119840 | None:intergenic | 30.0% | |
| CTAAACTTTATAGGCCTATT+TGG | - | chr4.4:41120167-41120186 | MS.gene30527:intron | 30.0% | |
| CTAGTTAAAATCAATTCTCG+AGG | - | chr4.4:41119657-41119676 | MS.gene30527:intron | 30.0% | |
| GAAAAACATTTGTGATAGCA+GGG | + | chr4.4:41122459-41122478 | None:intergenic | 30.0% | |
| GACTTATTGAACTGTTTATC+AGG | - | chr4.4:41120526-41120545 | MS.gene30527:intron | 30.0% | |
| GATACAGTTTGTGTTTACAT+TGG | + | chr4.4:41119995-41120014 | None:intergenic | 30.0% | |
| GATCTGTCTTCAACATAAAA+TGG | + | chr4.4:41121963-41121982 | None:intergenic | 30.0% | |
| GTCAAAGGAAAAGTAATTTC+TGG | + | chr4.4:41122320-41122339 | None:intergenic | 30.0% | |
| GTCAAATGAACAACTTCTAA+TGG | + | chr4.4:41120050-41120069 | None:intergenic | 30.0% | |
| GTGAAAACTCTTCAAAGATA+TGG | + | chr4.4:41120952-41120971 | None:intergenic | 30.0% | |
| TAAAGATAGAAAGGATTCTC+AGG | - | chr4.4:41121421-41121440 | MS.gene30527:intron | 30.0% | |
| TGAAAAACATTTGTGATAGC+AGG | + | chr4.4:41122460-41122479 | None:intergenic | 30.0% | |
| TGCCATTATTCTGTAATCAA+GGG | - | chr4.4:41122133-41122152 | MS.gene30527:intron | 30.0% | |
| TGGAATGTATAAAATGTGAC+AGG | + | chr4.4:41121943-41121962 | None:intergenic | 30.0% | |
| TTCATTTGACCGATGAATAT+TGG | - | chr4.4:41120060-41120079 | MS.gene30527:CDS | 30.0% | |
| TTCCCTTGATTACAGAATAA+TGG | + | chr4.4:41122138-41122157 | None:intergenic | 30.0% | |
| TTGTCTTGAATAATACCTGT+TGG | - | chr4.4:41122169-41122188 | MS.gene30527:intron | 30.0% | |
| ! | ATCCTTATTTAGTGTGTGTT+TGG | - | chr4.4:41119504-41119523 | MS.gene30527:CDS | 30.0% |
| ! | ATTTGGTAGATCGAATTTTG+CGG | + | chr4.4:41121402-41121421 | None:intergenic | 30.0% |
| ! | ATTTGTTGCAAGACATATTG+GGG | - | chr4.4:41121748-41121767 | MS.gene30527:CDS | 30.0% |
| ! | CACGTTTTTCCAATATTCAT+CGG | + | chr4.4:41120072-41120091 | None:intergenic | 30.0% |
| ! | CTAATGTGGTTTGAAATTTC+AGG | - | chr4.4:41121105-41121124 | MS.gene30527:intron | 30.0% |
| ! | CTTCAATAAATAAGTTCTGG+AGG | + | chr4.4:41119779-41119798 | None:intergenic | 30.0% |
| ! | TGGTTTGAAATTTCAGGTAA+AGG | - | chr4.4:41121111-41121130 | MS.gene30527:intron | 30.0% |
| !! | AGATTTTGACAACTTTTGGA+CGG | - | chr4.4:41119420-41119439 | MS.gene30527:CDS | 30.0% |
| !! | AGGAAGATTTTGACAACTTT+TGG | - | chr4.4:41119416-41119435 | MS.gene30527:CDS | 30.0% |
| !! | ATCTGTTACTGTTACTTTAG+AGG | - | chr4.4:41121996-41122015 | MS.gene30527:intron | 30.0% |
| !! | GAATTTGTTGCAAGACATAT+TGG | - | chr4.4:41121746-41121765 | MS.gene30527:CDS | 30.0% |
| !!! | CAAGATCTTGTTTTCATTTG+CGG | - | chr4.4:41120902-41120921 | MS.gene30527:intron | 30.0% |
| !!! | TGATTAGTTTTGAAAGAGAC+TGG | - | chr4.4:41121548-41121567 | MS.gene30527:intron | 30.0% |
| AAACTTGTCACAACAAACCT+TGG | + | chr4.4:41121209-41121228 | None:intergenic | 35.0% | |
| AACTTGTCACAACAAACCTT+GGG | + | chr4.4:41121208-41121227 | None:intergenic | 35.0% | |
| ACCTGAAAAGGTTAAGATAC+TGG | + | chr4.4:41122503-41122522 | None:intergenic | 35.0% | |
| AGAATAATGGCAGATCATTG+AGG | + | chr4.4:41122125-41122144 | None:intergenic | 35.0% | |
| AGGTATTATTCAAGACAACG+AGG | + | chr4.4:41122167-41122186 | None:intergenic | 35.0% | |
| ATCATGTACGTGTAGAAACA+TGG | - | chr4.4:41122197-41122216 | MS.gene30527:intron | 35.0% | |
| ATTCTCTCAAACATTCTCAC+AGG | + | chr4.4:41120236-41120255 | None:intergenic | 35.0% | |
| CCTATACTCTTCAATGATGT+AGG | + | chr4.4:41120555-41120574 | None:intergenic | 35.0% | |
| CGATGAATATTGGAAAAACG+TGG | - | chr4.4:41120070-41120089 | MS.gene30527:CDS | 35.0% | |
| CGGATCAATACAATTAATGC+AGG | + | chr4.4:41121912-41121931 | None:intergenic | 35.0% | |
| CTACGATTGTAGCTTAGAAA+TGG | - | chr4.4:41122541-41122560 | MS.gene30527:CDS | 35.0% | |
| CTGCCATTATTCTGTAATCA+AGG | - | chr4.4:41122132-41122151 | MS.gene30527:intron | 35.0% | |
| CTGCTTTCTACCTTAAGATA+TGG | - | chr4.4:41119271-41119290 | MS.gene30527:CDS | 35.0% | |
| CTTGATCATCTTCAGATATG+CGG | + | chr4.4:41122604-41122623 | None:intergenic | 35.0% | |
| CTTGTATTGCAAAGAACATC+CGG | + | chr4.4:41120596-41120615 | None:intergenic | 35.0% | |
| GAATAATGGCAGATCATTGA+GGG | + | chr4.4:41122124-41122143 | None:intergenic | 35.0% | |
| GCAATTTCACTGTTGAGTAT+TGG | - | chr4.4:41120479-41120498 | MS.gene30527:intron | 35.0% | |
| GTAACAGATCTATCACTACA+TGG | + | chr4.4:41121985-41122004 | None:intergenic | 35.0% | |
| TAAGCTACAATCGTAGAACA+CGG | + | chr4.4:41122537-41122556 | None:intergenic | 35.0% | |
| TACTTCAAATCATCTTCCCA+AGG | + | chr4.4:41119451-41119470 | None:intergenic | 35.0% | |
| TCATTAACTTAGGCCATGTT+TGG | + | chr4.4:41120446-41120465 | None:intergenic | 35.0% | |
| TGAGTTTAGAAGGACATGAA+GGG | + | chr4.4:41120107-41120126 | None:intergenic | 35.0% | |
| TGTAGCTTAGAAATGGAACT+TGG | - | chr4.4:41122548-41122567 | MS.gene30527:CDS | 35.0% | |
| TTATGTCAGAGTGAGAATTC+TGG | - | chr4.4:41121281-41121300 | MS.gene30527:intron | 35.0% | |
| ! | ATCATTGAAGAGTATAGGTG+TGG | - | chr4.4:41120557-41120576 | MS.gene30527:intron | 35.0% |
| ! | ATGAGTTGAATGTGAAATCC+CGG | - | chr4.4:41119589-41119608 | MS.gene30527:intron | 35.0% |
| ! | CCTACATCATTGAAGAGTAT+AGG | - | chr4.4:41120552-41120571 | MS.gene30527:intron | 35.0% |
| ! | GGTCTTTTAAATGGCTTAGT+GGG | - | chr4.4:41122365-41122384 | MS.gene30527:CDS | 35.0% |
| ! | TAGAATCAATTTTGCCTCCA+CGG | + | chr4.4:41119746-41119765 | None:intergenic | 35.0% |
| ! | TAGAGGTTGGTTAGTTAGTT+AGG | - | chr4.4:41122013-41122032 | MS.gene30527:intron | 35.0% |
| ! | TCCAGTATCTTAACCTTTTC+AGG | - | chr4.4:41122499-41122518 | MS.gene30527:intron | 35.0% |
| ! | TCTAGAACTATCACAAGACA+CGG | - | chr4.4:41120850-41120869 | MS.gene30527:intron | 35.0% |
| ! | TGTTTCTACACGTACATGAT+AGG | + | chr4.4:41122197-41122216 | None:intergenic | 35.0% |
| ! | TGTTTTCATTTGCGGTTTGT+AGG | - | chr4.4:41120910-41120929 | MS.gene30527:intron | 35.0% |
| ! | TTCTCAGGGAATATGCTTTT+TGG | - | chr4.4:41121436-41121455 | MS.gene30527:intron | 35.0% |
| ! | TTTCCTGTTAGGTGCATTTT+TGG | - | chr4.4:41120733-41120752 | MS.gene30527:intron | 35.0% |
| !! | GAAATTGGGATTTGTTGCTT+TGG | - | chr4.4:41119382-41119401 | MS.gene30527:intron | 35.0% |
| !! | GTTACTGTTACTTTAGAGGT+TGG | - | chr4.4:41122000-41122019 | MS.gene30527:intron | 35.0% |
| !! | TCTCAGGGAATATGCTTTTT+GGG | - | chr4.4:41121437-41121456 | MS.gene30527:intron | 35.0% |
| !! | TTAGTGTGTGTTTGGTTCTA+CGG | - | chr4.4:41119512-41119531 | MS.gene30527:CDS | 35.0% |
| !! | TTGCTTTGGTGATTTTGTGT+AGG | - | chr4.4:41119396-41119415 | MS.gene30527:intron | 35.0% |
| !!! | AACAGAAGAGTTTTGAGATG+GGG | + | chr4.4:41119077-41119096 | None:intergenic | 35.0% |
| !!! | CATTGGTTCTGGTGTAATTT+TGG | - | chr4.4:41122670-41122689 | MS.gene30527:CDS | 35.0% |
| !!! | GAACAGAAGAGTTTTGAGAT+GGG | + | chr4.4:41119078-41119097 | None:intergenic | 35.0% |
| !!! | GGCTTCTGGTTTTATACTAT+TGG | - | chr4.4:41121827-41121846 | MS.gene30527:intron | 35.0% |
| !!! | TATGCGCCTTTTTTTGTCAA+AGG | + | chr4.4:41122335-41122354 | None:intergenic | 35.0% |
| AAAAAGAAGTCGCTTCAGCT+GGG | + | chr4.4:41121170-41121189 | None:intergenic | 40.0% | |
| AAAGGAGATAGGACAAACCA+TGG | + | chr4.4:41121884-41121903 | None:intergenic | 40.0% | |
| AAGCTACAATCGTAGAACAC+GGG | + | chr4.4:41122536-41122555 | None:intergenic | 40.0% | |
| AATATGAGACAGAGCTGCAA+TGG | + | chr4.4:41120505-41120524 | None:intergenic | 40.0% | |
| AGACATATTGGGGAGAAAGA+AGG | - | chr4.4:41121758-41121777 | MS.gene30527:CDS | 40.0% | |
| AGATTTCCTTGGCAAACATC+GGG | - | chr4.4:41121805-41121824 | MS.gene30527:intron | 40.0% | |
| AGGTAAGGTTTGAAGAGAAG+CGG | + | chr4.4:41119100-41119119 | None:intergenic | 40.0% | |
| ATGCAGGTATGTTGTTGAGA+AGG | - | chr4.4:41122267-41122286 | MS.gene30527:intron | 40.0% | |
| CATCCAAAAATGCACCTAAC+AGG | + | chr4.4:41120739-41120758 | None:intergenic | 40.0% | |
| CATCCATCTCATCTGCAAAT+GGG | + | chr4.4:41120820-41120839 | None:intergenic | 40.0% | |
| CGCATATCTGAAGATGATCA+AGG | - | chr4.4:41122602-41122621 | MS.gene30527:CDS | 40.0% | |
| CTGAGTTTAGAAGGACATGA+AGG | + | chr4.4:41120108-41120127 | None:intergenic | 40.0% | |
| GAGATTTCCTTGGCAAACAT+CGG | - | chr4.4:41121804-41121823 | MS.gene30527:intron | 40.0% | |
| TATACTATTGGTCAACGCCA+GGG | - | chr4.4:41121839-41121858 | MS.gene30527:intron | 40.0% | |
| TATCATACTGGAAGCTGAGA+CGG | - | chr4.4:41121781-41121800 | MS.gene30527:intron | 40.0% | |
| TATGAGGGAAGAACATGCAT+TGG | - | chr4.4:41122653-41122672 | MS.gene30527:CDS | 40.0% | |
| TGCAGGAAAGAAAAGGAGAT+AGG | + | chr4.4:41121895-41121914 | None:intergenic | 40.0% | |
| TGCTTTACTTGCCAATTCTG+CGG | + | chr4.4:41122828-41122847 | None:intergenic | 40.0% | |
| TGGAAAACTTTGATCATCCC+CGG | + | chr4.4:41122699-41122718 | None:intergenic | 40.0% | |
| TGGTACTAGCTGAGTTTAGA+AGG | + | chr4.4:41120117-41120136 | None:intergenic | 40.0% | |
| TTATACTATTGGTCAACGCC+AGG | - | chr4.4:41121838-41121857 | MS.gene30527:intron | 40.0% | |
| TTGCAAAGAACATCCGGATT+CGG | + | chr4.4:41120590-41120609 | None:intergenic | 40.0% | |
| ! | AAGCGACTTCTTTTTCCACT+TGG | - | chr4.4:41121175-41121194 | MS.gene30527:intron | 40.0% |
| ! | GGGTCTTTTAAATGGCTTAG+TGG | - | chr4.4:41122364-41122383 | MS.gene30527:CDS | 40.0% |
| ! | TTGGATGCAATTGGTGGTAT+GGG | - | chr4.4:41120752-41120771 | MS.gene30527:intron | 40.0% |
| ! | TTTGGATGCAATTGGTGGTA+TGG | - | chr4.4:41120751-41120770 | MS.gene30527:intron | 40.0% |
| !! | AGCTTTGGAAATTGCACGAA+TGG | - | chr4.4:41122730-41122749 | MS.gene30527:CDS | 40.0% |
| !! | GCATTTTTGGATGCAATTGG+TGG | - | chr4.4:41120746-41120765 | MS.gene30527:intron | 40.0% |
| !! | GGAGAAAGAAGGTATCATAC+TGG | - | chr4.4:41121769-41121788 | MS.gene30527:CDS | 40.0% |
| !! | GGAGATTAGGGTTTAGTTTG+CGG | + | chr4.4:41119050-41119069 | None:intergenic | 40.0% |
| !! | GGTGCATTTTTGGATGCAAT+TGG | - | chr4.4:41120743-41120762 | MS.gene30527:intron | 40.0% |
| !! | GGTGTTTAGCTCTGTAGAAT+TGG | + | chr4.4:41119725-41119744 | None:intergenic | 40.0% |
| !! | TGTGATAGTTCTAGAGCAGA+AGG | + | chr4.4:41120845-41120864 | None:intergenic | 40.0% |
| !!! | CAAGTTTTGTTGAGTGTTGC+TGG | - | chr4.4:41121222-41121241 | MS.gene30527:CDS | 40.0% |
| !!! | GGAACAGAAGAGTTTTGAGA+TGG | + | chr4.4:41119079-41119098 | None:intergenic | 40.0% |
| !!! | GTTTTGACTATGTTGCCTCT+GGG | - | chr4.4:41120774-41120793 | MS.gene30527:intron | 40.0% |
| !!! | TAACCTTTTCAGGTGAGACA+TGG | - | chr4.4:41122509-41122528 | MS.gene30527:intron | 40.0% |
| !!! | TCTGGTGTAATTTTGGAGTC+CGG | - | chr4.4:41122677-41122696 | MS.gene30527:CDS | 40.0% |
| AACCTTTGCATAATGCCCAG+AGG | + | chr4.4:41120792-41120811 | None:intergenic | 45.0% | |
| ACCTTGGGAATAGAACCAAG+TGG | + | chr4.4:41121193-41121212 | None:intergenic | 45.0% | |
| ACTTCATCCTGCAGATGATG+TGG | + | chr4.4:41121368-41121387 | None:intergenic | 45.0% | |
| AGAAGGTGAAGGTGAAGGTA+AGG | + | chr4.4:41119115-41119134 | None:intergenic | 45.0% | |
| AGTGTGTGATTCCGCAGAAT+TGG | - | chr4.4:41122814-41122833 | MS.gene30527:CDS | 45.0% | |
| ATCATACTGGAAGCTGAGAC+GGG | - | chr4.4:41121782-41121801 | MS.gene30527:intron | 45.0% | |
| CACACTTCTTGCAGGTTATC+TGG | + | chr4.4:41122800-41122819 | None:intergenic | 45.0% | |
| CAGTTCACAGCCTTCTATGA+GGG | - | chr4.4:41122638-41122657 | MS.gene30527:CDS | 45.0% | |
| CCATCCATCTCATCTGCAAA+TGG | + | chr4.4:41120821-41120840 | None:intergenic | 45.0% | |
| CCATTTGCAGATGAGATGGA+TGG | - | chr4.4:41120818-41120837 | MS.gene30527:intron | 45.0% | |
| CGTACATGATAGGAACCAAC+AGG | + | chr4.4:41122187-41122206 | None:intergenic | 45.0% | |
| GAAAAAGAAGTCGCTTCAGC+TGG | + | chr4.4:41121171-41121190 | None:intergenic | 45.0% | |
| GAAAGCAGTGCAAGAATGAC+CGG | + | chr4.4:41119259-41119278 | None:intergenic | 45.0% | |
| GATTTCCTTGGCAAACATCG+GGG | - | chr4.4:41121806-41121825 | MS.gene30527:intron | 45.0% | |
| GCATGTTCTTCCCTCATAGA+AGG | + | chr4.4:41122651-41122670 | None:intergenic | 45.0% | |
| GCCATTTAAAAGACCCGACA+CGG | + | chr4.4:41122360-41122379 | None:intergenic | 45.0% | |
| GGTGTGTGAAGTGAGATAGA+GGG | + | chr4.4:41119020-41119039 | None:intergenic | 45.0% | |
| TCCAGTATGCGCAAAAGCTT+TGG | - | chr4.4:41122715-41122734 | MS.gene30527:CDS | 45.0% | |
| TGGTGTGTGAAGTGAGATAG+AGG | + | chr4.4:41119021-41119040 | None:intergenic | 45.0% | |
| TTCTACAGAGCTAAACACCG+TGG | - | chr4.4:41119726-41119745 | MS.gene30527:intron | 45.0% | |
| TTGAGAGAAGGTGAAGGTGA+AGG | + | chr4.4:41119120-41119139 | None:intergenic | 45.0% | |
| ! | AAAAGGCGCATATTCCGTGT+CGG | - | chr4.4:41122343-41122362 | MS.gene30527:CDS | 45.0% |
| ! | ACTTTTGGACGGAATGTCCT+TGG | - | chr4.4:41119431-41119450 | MS.gene30527:CDS | 45.0% |
| ! | CTTTTGGACGGAATGTCCTT+GGG | - | chr4.4:41119432-41119451 | MS.gene30527:CDS | 45.0% |
| ! | TCCAAAGCTTTTGCGCATAC+TGG | + | chr4.4:41122719-41122738 | None:intergenic | 45.0% |
| ! | TCCGTGTCGGGTCTTTTAAA+TGG | - | chr4.4:41122356-41122375 | MS.gene30527:CDS | 45.0% |
| !! | GATTAGGGTTTAGTTTGCGG+AGG | + | chr4.4:41119047-41119066 | None:intergenic | 45.0% |
| !! | GGAAGAACATGCATTGGTTC+TGG | - | chr4.4:41122659-41122678 | MS.gene30527:CDS | 45.0% |
| !! | GGGAATATGCTTTTTGGGCA+AGG | - | chr4.4:41121442-41121461 | MS.gene30527:intron | 45.0% |
| !! | TCCACTTGGTTCTATTCCCA+AGG | - | chr4.4:41121189-41121208 | MS.gene30527:intron | 45.0% |
| !!! | AGAGTTTTGAGATGGGGAAG+CGG | + | chr4.4:41119071-41119090 | None:intergenic | 45.0% |
| !!! | CTGGTGTAATTTTGGAGTCC+GGG | - | chr4.4:41122678-41122697 | MS.gene30527:CDS | 45.0% |
| !!! | GGTTTAGTTTGCGGAGGTTT+TGG | + | chr4.4:41119041-41119060 | None:intergenic | 45.0% |
| !!! | GGTTTTGACTATGTTGCCTC+TGG | - | chr4.4:41120773-41120792 | MS.gene30527:intron | 45.0% |
| !!! | TGGTGTAATTTTGGAGTCCG+GGG | - | chr4.4:41122679-41122698 | MS.gene30527:CDS | 45.0% |
| AAGTCAGCTTCGATGCAAGG+TGG | - | chr4.4:41122405-41122424 | MS.gene30527:intron | 50.0% | |
| AGATGGGGAAGCGGAGATTA+GGG | + | chr4.4:41119062-41119081 | None:intergenic | 50.0% | |
| ATGATCAAGGCCTAGCAGCT+GGG | - | chr4.4:41122615-41122634 | MS.gene30527:CDS | 50.0% | |
| CACTGATAAGAACCGCGACT+CGG | + | chr4.4:41119194-41119213 | None:intergenic | 50.0% | |
| CCACCCATTTGCAGATGAGA+TGG | - | chr4.4:41120814-41120833 | MS.gene30527:intron | 50.0% | |
| CCATCTCATCTGCAAATGGG+TGG | + | chr4.4:41120817-41120836 | None:intergenic | 50.0% | |
| CGGAATCACACACTTCTTGC+AGG | + | chr4.4:41122808-41122827 | None:intergenic | 50.0% | |
| GAGAAGTCAGCTTCGATGCA+AGG | - | chr4.4:41122402-41122421 | MS.gene30527:intron | 50.0% | |
| GATAGAGGGAGAGAACAGAG+TGG | + | chr4.4:41119006-41119025 | None:intergenic | 50.0% | |
| GCAGTTCACAGCCTTCTATG+AGG | - | chr4.4:41122637-41122656 | MS.gene30527:CDS | 50.0% | |
| GCATGGAACAGCGGAGATAT+GGG | + | chr4.4:41119155-41119174 | None:intergenic | 50.0% | |
| GGACCATGTCTCACCTGAAA+AGG | + | chr4.4:41122515-41122534 | None:intergenic | 50.0% | |
| GGGACTGAGATAGGTGTGAT+AGG | + | chr4.4:41121150-41121169 | None:intergenic | 50.0% | |
| TACAGAGCTAAACACCGTGG+AGG | - | chr4.4:41119729-41119748 | MS.gene30527:intron | 50.0% | |
| TGCCTCTGGGCATTATGCAA+AGG | - | chr4.4:41120787-41120806 | MS.gene30527:intron | 50.0% | |
| ! | AAAGGCGCATATTCCGTGTC+GGG | - | chr4.4:41122344-41122363 | MS.gene30527:CDS | 50.0% |
| ! | TCGAGTTCGGCATTGAGAGA+AGG | + | chr4.4:41119132-41119151 | None:intergenic | 50.0% |
| ! | TCGGCATTGAGAGAAGGTGA+AGG | + | chr4.4:41119126-41119145 | None:intergenic | 50.0% |
| ! | TGCATCGAAGCTGACTTCTC+TGG | + | chr4.4:41122402-41122421 | None:intergenic | 50.0% |
| AGAAGCCCCGATGTTTGCCA+AGG | + | chr4.4:41121814-41121833 | None:intergenic | 55.0% | |
| AGGACAAACCATGGACCTCC+AGG | + | chr4.4:41121875-41121894 | None:intergenic | 55.0% | |
| ATCTGCAGGATGAAGTCCGC+AGG | - | chr4.4:41121372-41121391 | MS.gene30527:intron | 55.0% | |
| CAGATGATGTGGCAGGAGAC+AGG | + | chr4.4:41121357-41121376 | None:intergenic | 55.0% | |
| CAGCTTCGATGCAAGGTGGA+TGG | - | chr4.4:41122409-41122428 | MS.gene30527:intron | 55.0% | |
| CATCCTGCAGATGATGTGGC+AGG | + | chr4.4:41121364-41121383 | None:intergenic | 55.0% | |
| CGAGTCGCGGTTCTTATCAG+TGG | - | chr4.4:41119192-41119211 | MS.gene30527:CDS | 55.0% | |
| GACCTGGCTGCAAACGTCTT+TGG | + | chr4.4:41119476-41119495 | None:intergenic | 55.0% | |
| GAGATGGGGAAGCGGAGATT+AGG | + | chr4.4:41119063-41119082 | None:intergenic | 55.0% | |
| GATGATCAAGGCCTAGCAGC+TGG | - | chr4.4:41122614-41122633 | MS.gene30527:CDS | 55.0% | |
| GCGGAGATATGGGTCGAGTT+CGG | + | chr4.4:41119145-41119164 | None:intergenic | 55.0% | |
| GCTGAGACGGGAGATTTCCT+TGG | - | chr4.4:41121794-41121813 | MS.gene30527:intron | 55.0% | |
| GCTTCAGCTGGGACTGAGAT+AGG | + | chr4.4:41121159-41121178 | None:intergenic | 55.0% | |
| GGCATGGAACAGCGGAGATA+TGG | + | chr4.4:41119156-41119175 | None:intergenic | 55.0% | |
| GTCGCGGTTCTTATCAGTGG+CGG | - | chr4.4:41119195-41119214 | MS.gene30527:CDS | 55.0% | |
| GTGTGGTCGAACTCCGAATC+CGG | - | chr4.4:41120574-41120593 | MS.gene30527:intron | 55.0% | |
| TCTCCTGCCACATCATCTGC+AGG | - | chr4.4:41121358-41121377 | MS.gene30527:intron | 55.0% | |
| TGCCAAAGACGTTTGCAGCC+AGG | - | chr4.4:41119471-41119490 | MS.gene30527:CDS | 55.0% | |
| TTGACAGCAGCGTTGCTCTC+CGG | - | chr4.4:41119220-41119239 | MS.gene30527:CDS | 55.0% | |
| TTGGCAAACATCGGGGCTTC+TGG | - | chr4.4:41121813-41121832 | MS.gene30527:intron | 55.0% | |
| TTGGTCAACGCCAGGGTCTA+CGG | - | chr4.4:41121846-41121865 | MS.gene30527:intron | 55.0% | |
| ! | AGCTGACTTCTCTGGCTAGG+AGG | + | chr4.4:41122394-41122413 | None:intergenic | 55.0% |
| ! | ATAAGAACCGCGACTCGGAG+TGG | + | chr4.4:41119189-41119208 | None:intergenic | 55.0% |
| ! | CGAAGCTGACTTCTCTGGCT+AGG | + | chr4.4:41122397-41122416 | None:intergenic | 55.0% |
| ! | CGAATTTTGCGGCAAGCCTG+CGG | + | chr4.4:41121391-41121410 | None:intergenic | 55.0% |
| CTCCGGCTTCTTCATGCTGC+CGG | - | chr4.4:41119237-41119256 | MS.gene30527:CDS | 60.0% | |
| CTGTGAACTGCCCAGCTGCT+AGG | + | chr4.4:41122628-41122647 | None:intergenic | 60.0% | |
| GACCGGCAGCATGAAGAAGC+CGG | + | chr4.4:41119242-41119261 | None:intergenic | 60.0% | |
| TACGGCTACCTGGAGGTCCA+TGG | - | chr4.4:41121864-41121883 | MS.gene30527:intron | 60.0% | |
| ACTCGGAGTGGCTTCGCCTG+CGG | + | chr4.4:41119177-41119196 | None:intergenic | 65.0% | |
| CAGGGTCTACGGCTACCTGG+AGG | - | chr4.4:41121857-41121876 | MS.gene30527:intron | 65.0% | |
| CTCCAGGTAGCCGTAGACCC+TGG | + | chr4.4:41121859-41121878 | None:intergenic | 65.0% | |
| TCGCCTGCGGCATGGAACAG+CGG | + | chr4.4:41119164-41119183 | None:intergenic | 65.0% | |
| TCTCCGCTGTTCCATGCCGC+AGG | - | chr4.4:41119158-41119177 | MS.gene30527:CDS | 65.0% | |
| CGCCAGGGTCTACGGCTACC+TGG | - | chr4.4:41121854-41121873 | MS.gene30527:intron | 70.0% | |
| GAGTGGCTTCGCCTGCGGCA+TGG | + | chr4.4:41119172-41119191 | None:intergenic | 70.0% | |
| GGCGAAGCCACTCCGAGTCG+CGG | - | chr4.4:41119179-41119198 | MS.gene30527:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 41118979 | 41122853 | 41118979 | ID=MS.gene30527 |
| chr4.4 | mRNA | 41118979 | 41122853 | 41118979 | ID=MS.gene30527.t1;Parent=MS.gene30527 |
| chr4.4 | exon | 41122533 | 41122853 | 41122533 | ID=MS.gene30527.t1.exon1;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41122533 | 41122853 | 41122533 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| chr4.4 | exon | 41122340 | 41122414 | 41122340 | ID=MS.gene30527.t1.exon2;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41122340 | 41122414 | 41122340 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| chr4.4 | exon | 41121741 | 41121794 | 41121741 | ID=MS.gene30527.t1.exon3;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41121741 | 41121794 | 41121741 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| chr4.4 | exon | 41121206 | 41121284 | 41121206 | ID=MS.gene30527.t1.exon4;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41121206 | 41121284 | 41121206 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| chr4.4 | exon | 41120961 | 41121088 | 41120961 | ID=MS.gene30527.t1.exon5;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41120961 | 41121088 | 41120961 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| chr4.4 | exon | 41120622 | 41120705 | 41120622 | ID=MS.gene30527.t1.exon6;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41120622 | 41120705 | 41120622 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| chr4.4 | exon | 41120369 | 41120452 | 41120369 | ID=MS.gene30527.t1.exon7;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41120369 | 41120452 | 41120369 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| chr4.4 | exon | 41119947 | 41120098 | 41119947 | ID=MS.gene30527.t1.exon8;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41119947 | 41120098 | 41119947 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| chr4.4 | exon | 41119409 | 41119559 | 41119409 | ID=MS.gene30527.t1.exon9;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41119409 | 41119559 | 41119409 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| chr4.4 | exon | 41118979 | 41119311 | 41118979 | ID=MS.gene30527.t1.exon10;Parent=MS.gene30527.t1 |
| chr4.4 | CDS | 41118979 | 41119311 | 41118979 | ID=cds.MS.gene30527.t1;Parent=MS.gene30527.t1 |
| Gene Sequence |
| Protein sequence |
