Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30856.t1 | XP_013468301.1 | 92.3 | 931 | 72 | 0 | 1 | 931 | 19 | 949 | 0.00E+00 | 1654.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30856.t1 | A0A072VLQ7 | 92.3 | 931 | 72 | 0 | 1 | 931 | 19 | 949 | 0.0e+00 | 1654.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene30856 | 0.821492 | 3.92E-53 | -1.69E-46 |
| MS.gene056228 | MS.gene30856 | 0.807835 | 4.16E-50 | -1.69E-46 |
| MS.gene059154 | MS.gene30856 | 0.809605 | 1.74E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 208 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAGTTCTCATTTAAATT+TGG | 0.111515 | 1.1:-49744376 | MS.gene30856:intron |
| TCAGCTAATAACTTCTTAAT+TGG | 0.144331 | 1.1:+49744322 | None:intergenic |
| CTCTTCTCCTCTCCCGTTTA+AGG | 0.163515 | 1.1:+49742847 | None:intergenic |
| TCTTCCTCTCCTAGATTTAA+AGG | 0.174348 | 1.1:-49743371 | MS.gene30856:CDS |
| TGTTGTCCTAAAACCTAATA+TGG | 0.174399 | 1.1:-49743633 | MS.gene30856:CDS |
| CTAAGGGGCTCAAAGGTTTC+AGG | 0.216196 | 1.1:+49742639 | None:intergenic |
| CTGATAATAATTTGGAAGTT+TGG | 0.219189 | 1.1:-49740372 | MS.gene30856:CDS |
| CCTGCTTCATCTACTGTCTT+TGG | 0.228985 | 1.1:-49742933 | MS.gene30856:CDS |
| AGGAGCCTGAACCTCAAAAT+TGG | 0.234023 | 1.1:+49742659 | None:intergenic |
| CTTCTCTTGGATTCAGTTGC+TGG | 0.236414 | 1.1:+49744289 | None:intergenic |
| TGCTCAAACTGATAATAATT+TGG | 0.237442 | 1.1:-49740380 | MS.gene30856:CDS |
| AAGGGATCAGGAAGAATTTA+AGG | 0.251312 | 1.1:-49744110 | MS.gene30856:CDS |
| TGCAGTTCTCATTTAAATTT+GGG | 0.277047 | 1.1:-49744375 | MS.gene30856:intron |
| GATAGTTCAAGCAGTGCTTC+TGG | 0.278337 | 1.1:-49743335 | MS.gene30856:CDS |
| TCATCTTGTTCTGAATGTTT+TGG | 0.281356 | 1.1:-49741591 | MS.gene30856:CDS |
| CAGCTAATAACTTCTTAATT+GGG | 0.297101 | 1.1:+49744323 | None:intergenic |
| AGAAATGCAGCCAAACCTTT+TGG | 0.297212 | 1.1:-49740184 | MS.gene30856:CDS |
| TCGGCCCGTGTCTTAGTAAA+AGG | 0.306031 | 1.1:-49742519 | MS.gene30856:CDS |
| TCAGCACGCAAGAATGTTCT+AGG | 0.325404 | 1.1:+49742906 | None:intergenic |
| TCCTTGTGCTGCTTGTTATT+AGG | 0.326961 | 1.1:+49744211 | None:intergenic |
| ATTGATAGTAGATGATTTAG+TGG | 0.328822 | 1.1:-49740005 | MS.gene30856:CDS |
| ATGTTCAAAGTTCTCCATAT+TGG | 0.331456 | 1.1:+49743790 | None:intergenic |
| TCAGCATGATTTCCATGTTC+TGG | 0.336312 | 1.1:+49743551 | None:intergenic |
| CTCTCCCGTTTAAGGTCCTT+TGG | 0.339239 | 1.1:+49742855 | None:intergenic |
| TCTTCGGATAAGGTTCTTCC+TGG | 0.346250 | 1.1:-49742546 | MS.gene30856:CDS |
| TTCTGAATCTTCTTCGGATA+AGG | 0.357900 | 1.1:-49742556 | MS.gene30856:CDS |
| TACCAGTTTCCTTACCTTGT+AGG | 0.359838 | 1.1:+49741553 | None:intergenic |
| ACTTCGTAATGATCGATATA+TGG | 0.362032 | 1.1:-49742880 | MS.gene30856:CDS |
| TACCTACCACTCTCTACCTT+TGG | 0.370274 | 1.1:+49744064 | None:intergenic |
| CTAGAGTATCCTTTAAATCT+AGG | 0.370791 | 1.1:+49743362 | None:intergenic |
| AAAGTTGCTGTTATTTCCTC+TGG | 0.371025 | 1.1:+49743302 | None:intergenic |
| TGTTAGAAGGAAATACATTA+TGG | 0.371730 | 1.1:-49740468 | MS.gene30856:CDS |
| ATTCATTGAACAGAAGTTCA+TGG | 0.372969 | 1.1:-49744002 | MS.gene30856:CDS |
| AGAGATGACATTGATGTAAT+AGG | 0.373309 | 1.1:-49740043 | MS.gene30856:CDS |
| TTCCTTGGTTCCCTAGCATC+TGG | 0.374335 | 1.1:+49740125 | None:intergenic |
| TTGATACGTCGCTAGGCGTT+TGG | 0.375451 | 1.1:+49743976 | None:intergenic |
| TCATGTAGAACCAACCAATA+TGG | 0.376303 | 1.1:-49743804 | MS.gene30856:CDS |
| TGTTTCTGTGTTTGAAGATC+TGG | 0.379454 | 1.1:-49740326 | MS.gene30856:CDS |
| GGGTGAATCTTCTTCAAGAT+TGG | 0.388790 | 1.1:+49742680 | None:intergenic |
| CATCATCCTCTACCTTTCCT+TGG | 0.391677 | 1.1:+49740110 | None:intergenic |
| GTGATTTGACTACTTGTTCA+AGG | 0.392537 | 1.1:-49740291 | MS.gene30856:CDS |
| GCATTTCTCACCCATGGCTG+TGG | 0.400191 | 1.1:+49740199 | None:intergenic |
| GTGGAAATCTTCTAAACAAT+CGG | 0.401053 | 1.1:-49744353 | MS.gene30856:CDS |
| CAGATTCCAACTTCAGCAAC+TGG | 0.404643 | 1.1:+49740557 | None:intergenic |
| AACACCTGGGGATCTTCTCT+TGG | 0.405633 | 1.1:+49744276 | None:intergenic |
| AGAGGAAATAACAGCAACTT+TGG | 0.406142 | 1.1:-49743300 | MS.gene30856:CDS |
| ACCCCTTTCCAATCACATTC+CGG | 0.411094 | 1.1:-49743827 | MS.gene30856:CDS |
| ATTTCAATTTGAGGTCAGAT+AGG | 0.413621 | 1.1:-49743766 | MS.gene30856:CDS |
| AATTCTAGAAGCACAATATC+TGG | 0.414534 | 1.1:-49742792 | MS.gene30856:CDS |
| TGGTGCCAAAGGACCTTAAA+CGG | 0.420078 | 1.1:-49742860 | MS.gene30856:CDS |
| TGGGCCTTCTGAATCTTCTT+CGG | 0.420630 | 1.1:-49742562 | MS.gene30856:CDS |
| GAAGGATCAAGAACTGAGAT+TGG | 0.422245 | 1.1:+49741630 | None:intergenic |
| ACCTACCACTCTCTACCTTT+GGG | 0.426395 | 1.1:+49744065 | None:intergenic |
| AGCCAATGTGCTGCTCCTGC+TGG | 0.428930 | 1.1:+49743145 | None:intergenic |
| TTCTGAGTTGGTTGAACCAC+TGG | 0.431879 | 1.1:-49743021 | MS.gene30856:CDS |
| TAGAAGGAGCTCAAGGGATC+AGG | 0.437081 | 1.1:-49744122 | MS.gene30856:CDS |
| AGAATTTAAGGATGTATTTG+AGG | 0.444098 | 1.1:-49744098 | MS.gene30856:CDS |
| ATAGTTCAAGCAGTGCTTCT+GGG | 0.448499 | 1.1:-49743334 | MS.gene30856:CDS |
| GACGTATCAGCTGGTTCTAC+TGG | 0.450301 | 1.1:-49741729 | MS.gene30856:CDS |
| GTATCTTCTGAAATGTTAGA+AGG | 0.450334 | 1.1:-49740481 | MS.gene30856:CDS |
| TTGAACATGATTTCAATTTG+AGG | 0.450676 | 1.1:-49743775 | MS.gene30856:CDS |
| CAACAGGGGTGAATTACAAC+AGG | 0.452060 | 1.1:-49743739 | MS.gene30856:CDS |
| GTATTCATCTTCAGATTTGA+AGG | 0.452350 | 1.1:-49744044 | MS.gene30856:CDS |
| TATGGAGAACTGAAGATAGC+TGG | 0.453058 | 1.1:-49740450 | MS.gene30856:CDS |
| CTACATGACCGGAATGTGAT+TGG | 0.453884 | 1.1:+49743819 | None:intergenic |
| TTGGCTGCATTTCTCACCCA+TGG | 0.454936 | 1.1:+49740193 | None:intergenic |
| AGGTCAGATAGGGAGTCAAC+AGG | 0.455232 | 1.1:-49743755 | MS.gene30856:CDS |
| GTCTGTGCATTCACTGAAGC+AGG | 0.455725 | 1.1:-49742754 | MS.gene30856:CDS |
| ATGACGGCCGATCGTCTAGA+AGG | 0.460383 | 1.1:-49744138 | MS.gene30856:CDS |
| CAGCATGGAGATTCATGTCC+AGG | 0.460685 | 1.1:+49741675 | None:intergenic |
| CTCTCTGAAGCACCTGTACC+TGG | 0.463051 | 1.1:-49741693 | MS.gene30856:CDS |
| TCTCCTGATTCTAGTTTCTC+CGG | 0.466591 | 1.1:-49744596 | MS.gene30856:CDS |
| AAAGGTAGAGGATGATGTCC+TGG | 0.466697 | 1.1:-49740104 | MS.gene30856:CDS |
| GACCGGAATGTGATTGGAAA+GGG | 0.468052 | 1.1:+49743825 | None:intergenic |
| CTAAAAGACCTTGCACTGTC+AGG | 0.468134 | 1.1:+49743476 | None:intergenic |
| TCATAAACAGCAACAACATC+AGG | 0.470640 | 1.1:-49744624 | MS.gene30856:CDS |
| TGTTTGAAGATCTGGAAGAT+AGG | 0.481147 | 1.1:-49740318 | MS.gene30856:CDS |
| GACAGCCTGCCTAGCGGGGA+AGG | 0.481337 | 1.1:-49743077 | MS.gene30856:CDS |
| TATCAAATGAAAACACTGTT+GGG | 0.482329 | 1.1:-49742581 | MS.gene30856:CDS |
| GAGGAAATAACAGCAACTTT+GGG | 0.485008 | 1.1:-49743299 | MS.gene30856:CDS |
| GCAACTCCAGTTGCTGAAGT+TGG | 0.486560 | 1.1:-49740563 | MS.gene30856:CDS |
| GTACCCTTCATTCTCTTACC+AGG | 0.488941 | 1.1:+49743107 | None:intergenic |
| CTACGTCTATTTAAGTCAAA+CGG | 0.489193 | 1.1:+49743272 | None:intergenic |
| ACAACAATCTTTGACGATCT+AGG | 0.490098 | 1.1:+49743650 | None:intergenic |
| AGGTGTTATAGCTAGATTGA+TGG | 0.492264 | 1.1:-49744260 | MS.gene30856:CDS |
| AAGACACGGGCCGATGATCC+AGG | 0.492746 | 1.1:+49742528 | None:intergenic |
| CAACGGCGAACCTTCTGAGT+TGG | 0.495337 | 1.1:-49743033 | MS.gene30856:CDS |
| TGAAACCTTCCCCGCTAGGC+AGG | 0.495785 | 1.1:+49743072 | None:intergenic |
| CCACCGGAGAAACTAGAATC+AGG | 0.500712 | 1.1:+49744593 | None:intergenic |
| GGAGCCTGAACCTCAAAATT+GGG | 0.501403 | 1.1:+49742660 | None:intergenic |
| GACAGATCATCTGTAAAAGA+AGG | 0.502791 | 1.1:+49741612 | None:intergenic |
| AGCTAATAACTTCTTAATTG+GGG | 0.505784 | 1.1:+49744324 | None:intergenic |
| ATTGGTTGGTTCTACATGAC+CGG | 0.509610 | 1.1:+49743808 | None:intergenic |
| AAGAGGTGCAAGGCACCAGC+AGG | 0.509861 | 1.1:-49743160 | MS.gene30856:CDS |
| CGAAGAAAATTCAATGCAAG+AGG | 0.512210 | 1.1:-49742478 | MS.gene30856:intron |
| AAGCATCGCGATGGTTATCA+TGG | 0.515516 | 1.1:-49743707 | MS.gene30856:CDS |
| TTTCTCTGCAACCTTGCCAC+CGG | 0.516407 | 1.1:+49744577 | None:intergenic |
| TTCTAGTTTCTCCGGTGGCA+AGG | 0.517530 | 1.1:-49744588 | MS.gene30856:CDS |
| ATTATCAGAGAGGTGGAAGA+TGG | 0.517782 | 1.1:-49743195 | MS.gene30856:CDS |
| ATATTTCAGGACGTATCAGC+TGG | 0.518195 | 1.1:-49741738 | MS.gene30856:intron |
| GCTAGATTGATGGGTCTTGA+CGG | 0.518416 | 1.1:-49744250 | MS.gene30856:CDS |
| TCATTGAAACCTTCCCCGCT+AGG | 0.518789 | 1.1:+49743068 | None:intergenic |
| GCTGATATGCTAGCGTTCCC+TGG | 0.518873 | 1.1:-49743125 | MS.gene30856:CDS |
| GTATCAAATGAAAACACTGT+TGG | 0.522003 | 1.1:-49742582 | MS.gene30856:CDS |
| CTGGGTATCAGCAGCAAGGA+TGG | 0.522721 | 1.1:-49743002 | MS.gene30856:CDS |
| CTACTTGTTCAAGGTCTGAA+AGG | 0.522940 | 1.1:-49740282 | MS.gene30856:CDS |
| CCAACGCCTCAAGTGTATCA+TGG | 0.523411 | 1.1:+49743930 | None:intergenic |
| GTTGTCCTAAAACCTAATAT+GGG | 0.523452 | 1.1:-49743632 | MS.gene30856:CDS |
| CCATGATACACTTGAGGCGT+TGG | 0.524158 | 1.1:-49743930 | MS.gene30856:CDS |
| CATTTCTCACCCATGGCTGT+GGG | 0.524711 | 1.1:+49740200 | None:intergenic |
| ATCAATCTAGCTATAACACC+TGG | 0.525093 | 1.1:+49744262 | None:intergenic |
| GGTGCCAAAGGACCTTAAAC+GGG | 0.527205 | 1.1:-49742859 | MS.gene30856:CDS |
| ATCAAGAACTGAGATTGGAC+TGG | 0.529259 | 1.1:+49741635 | None:intergenic |
| GGAGATTCATGTCCAGGTAC+AGG | 0.532375 | 1.1:+49741681 | None:intergenic |
| TGGAAATCTTCTAAACAATC+GGG | 0.532665 | 1.1:-49744352 | MS.gene30856:CDS |
| TTTATCTCTAAGGGGCTCAA+AGG | 0.532888 | 1.1:+49742632 | None:intergenic |
| TTTCAATTTGAGGTCAGATA+GGG | 0.533938 | 1.1:-49743765 | MS.gene30856:CDS |
| TATCTGGTCACAAGAAGTCT+TGG | 0.534254 | 1.1:-49742776 | MS.gene30856:CDS |
| ATCTACTGACCCACAGCCAT+GGG | 0.534736 | 1.1:-49740209 | MS.gene30856:CDS |
| CAAGGTTGCAGAGAAAGATT+CGG | 0.535082 | 1.1:-49744570 | MS.gene30856:intron |
| CCAAAGACAGTAGATGAAGC+AGG | 0.535618 | 1.1:+49742933 | None:intergenic |
| GGTGTTATAGCTAGATTGAT+GGG | 0.536964 | 1.1:-49744259 | MS.gene30856:CDS |
| TTCTGCTAAAATACTTCAAG+CGG | 0.538802 | 1.1:-49743892 | MS.gene30856:CDS |
| ATGATTAACGGGCTTCAAGA+TGG | 0.541073 | 1.1:-49740154 | MS.gene30856:CDS |
| TACCCTTCATTCTCTTACCA+GGG | 0.542493 | 1.1:+49743108 | None:intergenic |
| TCAAAGTTCTCCATATTGGT+TGG | 0.546294 | 1.1:+49743794 | None:intergenic |
| GGTCAGATAGGGAGTCAACA+GGG | 0.546327 | 1.1:-49743754 | MS.gene30856:CDS |
| GATCGTCTAGAAGGAGCTCA+AGG | 0.549101 | 1.1:-49744129 | MS.gene30856:CDS |
| AGAAAATTATGCGGAGAACA+AGG | 0.550019 | 1.1:+49743575 | None:intergenic |
| CACCAGCAGGAGCAGCACAT+TGG | 0.551873 | 1.1:-49743147 | MS.gene30856:CDS |
| TAAGGTTCTTCCTGGATCAT+CGG | 0.551990 | 1.1:-49742538 | MS.gene30856:CDS |
| CCTCAATCAGCAACTTGCCC+AGG | 0.553535 | 1.1:+49740086 | None:intergenic |
| TAAATTTGCCTGACAGTGCA+AGG | 0.555917 | 1.1:-49743484 | MS.gene30856:CDS |
| CCTGGGCAAGTTGCTGATTG+AGG | 0.558438 | 1.1:-49740086 | MS.gene30856:CDS |
| AGCAGAGGAACGGCAAATGA+CGG | 0.558914 | 1.1:-49744154 | MS.gene30856:CDS |
| ATGGAGAACTGAAGATAGCT+GGG | 0.559618 | 1.1:-49740449 | MS.gene30856:CDS |
| TCATCTTCAGATTTGAAGGA+CGG | 0.560308 | 1.1:-49744040 | MS.gene30856:CDS |
| GTATCAGCAGCAAGGATGGT+TGG | 0.563267 | 1.1:-49742998 | MS.gene30856:CDS |
| TTGTTATTAGGCTGCTGAGA+TGG | 0.565145 | 1.1:+49744223 | None:intergenic |
| AATGATAAGTTTGCTCGCAA+CGG | 0.566185 | 1.1:-49743050 | MS.gene30856:CDS |
| GTTCCCTGGTAAGAGAATGA+AGG | 0.568397 | 1.1:-49743111 | MS.gene30856:CDS |
| AGAAGAGATTATCAGAGAGG+TGG | 0.574106 | 1.1:-49743202 | MS.gene30856:CDS |
| AATCTACTGACCCACAGCCA+TGG | 0.575881 | 1.1:-49740210 | MS.gene30856:CDS |
| AGTTGCTGATTGAGGAGTCT+CGG | 0.577954 | 1.1:-49740078 | MS.gene30856:CDS |
| GCCTAATAACAAGCAGCACA+AGG | 0.581754 | 1.1:-49744212 | MS.gene30856:CDS |
| AGTTCTCATTTAAATTTGGG+TGG | 0.584733 | 1.1:-49744372 | MS.gene30856:CDS |
| TCTGAGTTGGTTGAACCACT+GGG | 0.584863 | 1.1:-49743020 | MS.gene30856:CDS |
| CAAAGGACCTTAAACGGGAG+AGG | 0.584910 | 1.1:-49742854 | MS.gene30856:CDS |
| TCAAGAACTGAGATTGGACT+GGG | 0.587958 | 1.1:+49741636 | None:intergenic |
| GTATCAGCTGGTTCTACTGG+TGG | 0.588755 | 1.1:-49741726 | MS.gene30856:CDS |
| TCCCAAAGGTAGAGAGTGGT+AGG | 0.589898 | 1.1:-49744066 | MS.gene30856:CDS |
| TTCCCTGGTAAGAGAATGAA+GGG | 0.592385 | 1.1:-49743110 | MS.gene30856:CDS |
| TGACCGGAATGTGATTGGAA+AGG | 0.595190 | 1.1:+49743824 | None:intergenic |
| CTAGTTTCAAGTGACGAAGA+TGG | 0.596738 | 1.1:-49740511 | MS.gene30856:CDS |
| TGATCGATATATGGTGCCAA+AGG | 0.596759 | 1.1:-49742871 | MS.gene30856:CDS |
| AGGGAACCAAGGAAAGGTAG+AGG | 0.597684 | 1.1:-49740116 | MS.gene30856:CDS |
| TTCCAGATGCTAGGGAACCA+AGG | 0.597921 | 1.1:-49740127 | MS.gene30856:CDS |
| TGATCAGCATCTTTACAGCA+TGG | 0.598824 | 1.1:+49741660 | None:intergenic |
| TCAGCAGCAAGGATGGTTGG+AGG | 0.599245 | 1.1:-49742995 | MS.gene30856:CDS |
| GATTTAGTGGCAGAAATAGT+CGG | 0.599671 | 1.1:-49739992 | MS.gene30856:CDS |
| CAAAGAAGAGATTATCAGAG+AGG | 0.605669 | 1.1:-49743205 | MS.gene30856:CDS |
| TTCAAGTGACGAAGATGGCG+TGG | 0.605966 | 1.1:-49740506 | MS.gene30856:CDS |
| GAATCCAAGAGAAGATCCCC+AGG | 0.606684 | 1.1:-49744280 | MS.gene30856:CDS |
| GAAAATCTTGATACGTCGCT+AGG | 0.608770 | 1.1:+49743969 | None:intergenic |
| TCAATCTAGCTATAACACCT+GGG | 0.609545 | 1.1:+49744263 | None:intergenic |
| TTGAGCTCCTTCTAGACGAT+CGG | 0.612282 | 1.1:+49744131 | None:intergenic |
| CAGCAGCAAGGATGGTTGGA+GGG | 0.612392 | 1.1:-49742994 | MS.gene30856:CDS |
| CATGTATTAGTAGTTTGTCA+AGG | 0.613209 | 1.1:-49742968 | MS.gene30856:CDS |
| TCAAACACAGAAACACTCAC+AGG | 0.614246 | 1.1:+49740334 | None:intergenic |
| AAGGTAGAGGATGATGTCCT+GGG | 0.615193 | 1.1:-49740103 | MS.gene30856:CDS |
| AGTGTCAGTGCTGACCTACA+AGG | 0.615243 | 1.1:-49741567 | MS.gene30856:intron |
| CTAGCATAGGTCCCTCCACA+TGG | 0.618293 | 1.1:+49740530 | None:intergenic |
| TGAATCATCTGTGAGTAGAG+AGG | 0.619779 | 1.1:-49743228 | MS.gene30856:CDS |
| TCGTCACTTGAAACTAGCAT+AGG | 0.622726 | 1.1:+49740517 | None:intergenic |
| AAATTGCAAAGGAAGTAACT+AGG | 0.628658 | 1.1:-49743430 | MS.gene30856:CDS |
| GAGATCCCAAAGGTAGAGAG+TGG | 0.629561 | 1.1:-49744070 | MS.gene30856:CDS |
| TGACAATTCCTGAATTGATG+CGG | 0.632177 | 1.1:+49740245 | None:intergenic |
| CCTGATTCTAGTTTCTCCGG+TGG | 0.633485 | 1.1:-49744593 | MS.gene30856:CDS |
| GGAATCTAGAGAAATTGCAA+AGG | 0.633666 | 1.1:-49743441 | MS.gene30856:CDS |
| TGAGGCGTTGGACTCTAACA+AGG | 0.635888 | 1.1:-49743918 | MS.gene30856:CDS |
| TTTCATCAGAAGCATCGCGA+TGG | 0.636867 | 1.1:-49743716 | MS.gene30856:CDS |
| AAATCTTCTAAACAATCGGG+TGG | 0.637998 | 1.1:-49744349 | MS.gene30856:CDS |
| GATGCTAGGGAACCAAGGAA+AGG | 0.644912 | 1.1:-49740122 | MS.gene30856:CDS |
| GTATCCTTTAAATCTAGGAG+AGG | 0.646624 | 1.1:+49743367 | None:intergenic |
| GGAATCTGAAGACCATGTGG+AGG | 0.646710 | 1.1:-49740542 | MS.gene30856:CDS |
| AGTGGTTCAACCAACTCAGA+AGG | 0.647689 | 1.1:+49743023 | None:intergenic |
| ACCACTGGGTATCAGCAGCA+AGG | 0.651868 | 1.1:-49743006 | MS.gene30856:CDS |
| GATGGCACACAAGTCTCAAG+AGG | 0.654613 | 1.1:-49743177 | MS.gene30856:CDS |
| CACAAGTCTCAAGAGGTGCA+AGG | 0.655382 | 1.1:-49743170 | MS.gene30856:CDS |
| TCCTTGCTGCTGATACCCAG+TGG | 0.657434 | 1.1:+49743005 | None:intergenic |
| ATCGTCTAGAAGGAGCTCAA+GGG | 0.660920 | 1.1:-49744128 | MS.gene30856:CDS |
| TTCTGGGAATGAATCTCCAG+AGG | 0.661179 | 1.1:-49743318 | MS.gene30856:CDS |
| CAAACACAGAAACACTCACA+GGG | 0.661315 | 1.1:+49740335 | None:intergenic |
| GAATCTGAAGACCATGTGGA+GGG | 0.661775 | 1.1:-49740541 | MS.gene30856:CDS |
| ACCGGAATGTGATTGGAAAG+GGG | 0.664557 | 1.1:+49743826 | None:intergenic |
| GTCAGATAGGGAGTCAACAG+GGG | 0.667063 | 1.1:-49743753 | MS.gene30856:CDS |
| AAGAGTCTTGATCATAGACA+TGG | 0.675010 | 1.1:-49742819 | MS.gene30856:CDS |
| ACTTAAATAGACGTAGCAGA+CGG | 0.675436 | 1.1:-49743265 | MS.gene30856:CDS |
| CAATCTAGCTATAACACCTG+GGG | 0.676866 | 1.1:+49744264 | None:intergenic |
| CAGGTACAGGTGCTTCAGAG+AGG | 0.687176 | 1.1:+49741694 | None:intergenic |
| TTATCCGAAGAAGATTCAGA+AGG | 0.687645 | 1.1:+49742558 | None:intergenic |
| TGCTGATTGAGGAGTCTCGG+TGG | 0.702994 | 1.1:-49740075 | MS.gene30856:CDS |
| GTTGGAATCTGAAGACCATG+TGG | 0.720815 | 1.1:-49740545 | MS.gene30856:CDS |
| AATATGGGAAAATTTCAGAG+TGG | 0.723259 | 1.1:-49743617 | MS.gene30856:CDS |
| TGTTCTGGCAGAAAATTATG+CGG | 0.723663 | 1.1:+49743566 | None:intergenic |
| TGAGGTCTCAGAGATCCCAA+AGG | 0.724251 | 1.1:-49744080 | MS.gene30856:CDS |
| AGAGTTCCATGATACACTTG+AGG | 0.730462 | 1.1:-49743936 | MS.gene30856:CDS |
| ACAGATGATTCACTAGAACG+TGG | 0.770661 | 1.1:+49743239 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGAAATGTATAAATAA+GGG | + | chr1.1:49742470-49742489 | None:intergenic | 10.0% |
| !! | TATTAAGAAATGTATAAATA+AGG | + | chr1.1:49742471-49742490 | None:intergenic | 10.0% |
| !!! | AAATTTTATGAGAAATTATT+TGG | + | chr1.1:49742318-49742337 | None:intergenic | 10.0% |
| !! | AAAAAATAATCAAATTCTCA+AGG | + | chr1.1:49742601-49742620 | None:intergenic | 15.0% |
| !! | AAATATTAATAGCAACAAAA+TGG | + | chr1.1:49742690-49742709 | None:intergenic | 15.0% |
| !! | AATATTAATAGCAACAAAAT+GGG | + | chr1.1:49742689-49742708 | None:intergenic | 15.0% |
| !! | ATAAACATATCAAAATAACA+TGG | + | chr1.1:49742182-49742201 | None:intergenic | 15.0% |
| !! | ATGGTTAAATAATAAATTTG+TGG | + | chr1.1:49743499-49743518 | None:intergenic | 15.0% |
| !!! | TTTGTTTTCTAAAAATAACA+CGG | + | chr1.1:49740187-49740206 | None:intergenic | 15.0% |
| !! | AAAATGTATGATTAAGTCTA+AGG | + | chr1.1:49742737-49742756 | None:intergenic | 20.0% |
| !! | AATATTTCAAAGTTCTGTTA+AGG | - | chr1.1:49742830-49742849 | MS.gene30856:CDS | 20.0% |
| !! | ATAGCTAGAATTTATGAATA+AGG | - | chr1.1:49740119-49740138 | MS.gene30856:CDS | 20.0% |
| !! | ATATTTCAAAGTTCTGTTAA+GGG | - | chr1.1:49742831-49742850 | MS.gene30856:CDS | 20.0% |
| !! | ATGTAAAGTTTCAAAAACAT+TGG | - | chr1.1:49742628-49742647 | MS.gene30856:CDS | 20.0% |
| !! | CAATTATGAATCCAAATATA+AGG | + | chr1.1:49743140-49743159 | None:intergenic | 20.0% |
| !! | GTAATATTAAACCCTATTTA+TGG | - | chr1.1:49743242-49743261 | MS.gene30856:CDS | 20.0% |
| !! | TAAAATTACTTCAATTTGCA+TGG | - | chr1.1:49743385-49743404 | MS.gene30856:CDS | 20.0% |
| !! | TGAGAAATTATTTGGTTAAT+TGG | + | chr1.1:49742310-49742329 | None:intergenic | 20.0% |
| !! | TGATATTGTTGTAATATTTC+AGG | - | chr1.1:49742871-49742890 | MS.gene30856:CDS | 20.0% |
| !! | TTATTATTTAACCATAGCAA+GGG | - | chr1.1:49743504-49743523 | MS.gene30856:CDS | 20.0% |
| !! | TTTATTATTTAACCATAGCA+AGG | - | chr1.1:49743503-49743522 | MS.gene30856:CDS | 20.0% |
| !! | TTTGGATCAAAAATGATTAA+CGG | - | chr1.1:49744456-49744475 | MS.gene30856:intron | 20.0% |
| !!! | AACCTTTCATCAATTTTTTA+TGG | - | chr1.1:49743895-49743914 | MS.gene30856:CDS | 20.0% |
| !!! | ATTTTGAACTTCATTTAAGT+CGG | + | chr1.1:49741912-49741931 | None:intergenic | 20.0% |
| !!! | TATTGAATGAATCTAAAACA+TGG | + | chr1.1:49743649-49743668 | None:intergenic | 20.0% |
| !!! | TTAATCATTTTTGATCCAAA+AGG | + | chr1.1:49744456-49744475 | None:intergenic | 20.0% |
| !!! | TTTTATTATTGTCAAGAATG+TGG | + | chr1.1:49743370-49743389 | None:intergenic | 20.0% |
| ! | AACCTTTAACCTTCATATAT+AGG | + | chr1.1:49743272-49743291 | None:intergenic | 25.0% |
| ! | AATAACAGTTCATTACAACA+AGG | + | chr1.1:49744021-49744040 | None:intergenic | 25.0% |
| ! | AATGAACTGTTATTGTTGAT+AGG | - | chr1.1:49744027-49744046 | MS.gene30856:CDS | 25.0% |
| ! | AGAATTTAAGGATGTATTTG+AGG | - | chr1.1:49740524-49740543 | MS.gene30856:CDS | 25.0% |
| ! | AGAGATGATTAAGTAACTAA+AGG | + | chr1.1:49743166-49743185 | None:intergenic | 25.0% |
| ! | AGCTAATAACTTCTTAATTG+GGG | + | chr1.1:49740301-49740320 | None:intergenic | 25.0% |
| ! | ATATAGGATGTCCATAAATA+GGG | + | chr1.1:49743256-49743275 | None:intergenic | 25.0% |
| ! | ATCCTATATATGAAGGTTAA+AGG | - | chr1.1:49743267-49743286 | MS.gene30856:CDS | 25.0% |
| ! | ATGAACTGTTATTGTTGATA+GGG | - | chr1.1:49744028-49744047 | MS.gene30856:CDS | 25.0% |
| ! | CAGATAAAAGAACTAAGAAT+AGG | + | chr1.1:49742560-49742579 | None:intergenic | 25.0% |
| ! | CAGCTAATAACTTCTTAATT+GGG | + | chr1.1:49740302-49740321 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr1.1:49743660-49743679 | MS.gene30856:CDS | 25.0% |
| ! | CTCCATAAAAAATTGATGAA+AGG | + | chr1.1:49743900-49743919 | None:intergenic | 25.0% |
| ! | CTGATAATAATTTGGAAGTT+TGG | - | chr1.1:49744250-49744269 | MS.gene30856:CDS | 25.0% |
| ! | TATATAGGATGTCCATAAAT+AGG | + | chr1.1:49743257-49743276 | None:intergenic | 25.0% |
| ! | TATCAAATGAAAACACTGTT+GGG | - | chr1.1:49742041-49742060 | MS.gene30856:intron | 25.0% |
| ! | TCAGCTAATAACTTCTTAAT+TGG | + | chr1.1:49740303-49740322 | None:intergenic | 25.0% |
| ! | TGCAGTTCTCATTTAAATTT+GGG | - | chr1.1:49740247-49740266 | MS.gene30856:CDS | 25.0% |
| ! | TGCTCAAACTGATAATAATT+TGG | - | chr1.1:49744242-49744261 | MS.gene30856:CDS | 25.0% |
| ! | TGTTAGAAGGAAATACATTA+TGG | - | chr1.1:49744154-49744173 | MS.gene30856:CDS | 25.0% |
| ! | TTCATAACCAAAAGTGAAAA+AGG | + | chr1.1:49740091-49740110 | None:intergenic | 25.0% |
| ! | TTGAACATGATTTCAATTTG+AGG | - | chr1.1:49740847-49740866 | MS.gene30856:intron | 25.0% |
| ! | TTGCAGTTCTCATTTAAATT+TGG | - | chr1.1:49740246-49740265 | MS.gene30856:CDS | 25.0% |
| ! | TTGGATCAAAAATGATTAAC+GGG | - | chr1.1:49744457-49744476 | MS.gene30856:intron | 25.0% |
| !! | AAACAACACTTTTATCTCTA+AGG | + | chr1.1:49742003-49742022 | None:intergenic | 25.0% |
| !! | AACAACACTTTTATCTCTAA+GGG | + | chr1.1:49742002-49742021 | None:intergenic | 25.0% |
| !! | ATTGATAGTAGATGATTTAG+TGG | - | chr1.1:49744617-49744636 | MS.gene30856:CDS | 25.0% |
| !! | ATTTTCCCATATTAGGTTTT+AGG | + | chr1.1:49740998-49741017 | None:intergenic | 25.0% |
| !! | ATTTTGCACAATTGTTTAGA+TGG | - | chr1.1:49742706-49742725 | MS.gene30856:CDS | 25.0% |
| !! | TTTTGAACTTCATTTAAGTC+GGG | + | chr1.1:49741911-49741930 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | - | chr1.1:49743734-49743753 | MS.gene30856:CDS | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | + | chr1.1:49743753-49743734 | None:intergenic | 25.0% |
| !!! | AGATTGATGACGTAATTATT+AGG | + | chr1.1:49743568-49743587 | None:intergenic | 25.0% |
| !!! | GTTTTTTCCTTTTTCACTTT+TGG | - | chr1.1:49740081-49740100 | MS.gene30856:CDS | 25.0% |
| !!! | TACAGTTTTTTGATCATAGA+CGG | - | chr1.1:49743292-49743311 | MS.gene30856:CDS | 25.0% |
| AAAATTCAATGCAAGAGGTT+AGG | - | chr1.1:49742149-49742168 | MS.gene30856:intron | 30.0% | |
| AAATTGCAAAGGAAGTAACT+AGG | - | chr1.1:49741192-49741211 | MS.gene30856:intron | 30.0% | |
| AAATTGCCAAATCTATGATC+TGG | - | chr1.1:49742388-49742407 | MS.gene30856:intron | 30.0% | |
| AATATGGGAAAATTTCAGAG+TGG | - | chr1.1:49741005-49741024 | MS.gene30856:intron | 30.0% | |
| ACTTCGTAATGATCGATATA+TGG | - | chr1.1:49741742-49741761 | MS.gene30856:intron | 30.0% | |
| AGAGATGACATTGATGTAAT+AGG | - | chr1.1:49744579-49744598 | MS.gene30856:CDS | 30.0% | |
| AGTTCTCATTTAAATTTGGG+TGG | - | chr1.1:49740250-49740269 | MS.gene30856:CDS | 30.0% | |
| ATGAAAAACAATCTGAGCAA+TGG | - | chr1.1:49741218-49741237 | MS.gene30856:intron | 30.0% | |
| ATGAATCCAAATATAAGGTG+AGG | + | chr1.1:49743135-49743154 | None:intergenic | 30.0% | |
| ATGGTATGTAATGTAGAAAG+TGG | - | chr1.1:49743413-49743432 | MS.gene30856:CDS | 30.0% | |
| ATGTTCAAAGTTCTCCATAT+TGG | + | chr1.1:49740835-49740854 | None:intergenic | 30.0% | |
| ATTCATTGAACAGAAGTTCA+TGG | - | chr1.1:49740620-49740639 | MS.gene30856:intron | 30.0% | |
| CAACAAGGAAACCAAAAAAA+AGG | + | chr1.1:49744006-49744025 | None:intergenic | 30.0% | |
| CTACGTCTATTTAAGTCAAA+CGG | + | chr1.1:49741353-49741372 | None:intergenic | 30.0% | |
| GTATCAAATGAAAACACTGT+TGG | - | chr1.1:49742040-49742059 | MS.gene30856:intron | 30.0% | |
| GTATTCATCTTCAGATTTGA+AGG | - | chr1.1:49740578-49740597 | MS.gene30856:intron | 30.0% | |
| GTGGAAATCTTCTAAACAAT+CGG | - | chr1.1:49740269-49740288 | MS.gene30856:CDS | 30.0% | |
| GTGTTGAACTCAATATCTAA+TGG | - | chr1.1:49742410-49742429 | MS.gene30856:intron | 30.0% | |
| GTTGTCCTAAAACCTAATAT+GGG | - | chr1.1:49740990-49741009 | MS.gene30856:intron | 30.0% | |
| TATGGACATCCTATATATGA+AGG | - | chr1.1:49743260-49743279 | MS.gene30856:CDS | 30.0% | |
| TGGAAATCTTCTAAACAATC+GGG | - | chr1.1:49740270-49740289 | MS.gene30856:CDS | 30.0% | |
| TGTATATACTAAGACCTCAA+AGG | + | chr1.1:49743598-49743617 | None:intergenic | 30.0% | |
| TGTTGTCCTAAAACCTAATA+TGG | - | chr1.1:49740989-49741008 | MS.gene30856:intron | 30.0% | |
| TGTTTCGTTTAACAGTTGAT+TGG | - | chr1.1:49743939-49743958 | MS.gene30856:CDS | 30.0% | |
| TTCTCAACGATCAATTATTC+TGG | - | chr1.1:49742785-49742804 | MS.gene30856:CDS | 30.0% | |
| TTCTGCTAAAATACTTCAAG+CGG | - | chr1.1:49740730-49740749 | MS.gene30856:intron | 30.0% | |
| ! | AATTCTAGAAGCACAATATC+TGG | - | chr1.1:49741830-49741849 | MS.gene30856:intron | 30.0% |
| ! | ACAACACTTTTATCTCTAAG+GGG | + | chr1.1:49742001-49742020 | None:intergenic | 30.0% |
| ! | ACATTTTGTGAAGTTATCAG+AGG | - | chr1.1:49742750-49742769 | MS.gene30856:CDS | 30.0% |
| ! | ATTTCAATTTGAGGTCAGAT+AGG | - | chr1.1:49740856-49740875 | MS.gene30856:intron | 30.0% |
| ! | CATGTATTAGTAGTTTGTCA+AGG | - | chr1.1:49741654-49741673 | MS.gene30856:CDS | 30.0% |
| ! | CATTTTTGATCCAAAAGGTT+TGG | + | chr1.1:49744451-49744470 | None:intergenic | 30.0% |
| ! | CTAGAGTATCCTTTAAATCT+AGG | + | chr1.1:49741263-49741282 | None:intergenic | 30.0% |
| ! | CTTTTATCTGATCATCATAC+AGG | - | chr1.1:49742570-49742589 | MS.gene30856:CDS | 30.0% |
| ! | TAATTGGCTTATGTGATATG+AGG | + | chr1.1:49742294-49742313 | None:intergenic | 30.0% |
| ! | TTTCAATTTGAGGTCAGATA+GGG | - | chr1.1:49740857-49740876 | MS.gene30856:intron | 30.0% |
| !! | GTATCTTCTGAAATGTTAGA+AGG | - | chr1.1:49744141-49744160 | MS.gene30856:CDS | 30.0% |
| !! | TCATCTTGTTCTGAATGTTT+TGG | - | chr1.1:49743031-49743050 | MS.gene30856:CDS | 30.0% |
| !! | TGCTTTTTAAACAAAGAGTC+TGG | + | chr1.1:49740756-49740775 | None:intergenic | 30.0% |
| !!! | CTCTGAAATTTTCCCATATT+AGG | + | chr1.1:49741005-49741024 | None:intergenic | 30.0% |
| !!! | TGATGTTTGTGCCTTTTTTT+TGG | - | chr1.1:49743992-49744011 | MS.gene30856:CDS | 30.0% |
| AAATCTTCTAAACAATCGGG+TGG | - | chr1.1:49740273-49740292 | MS.gene30856:CDS | 35.0% | |
| AAGAATGTGGCAAGCTAAAA+AGG | + | chr1.1:49743357-49743376 | None:intergenic | 35.0% | |
| AAGAGTCTTGATCATAGACA+TGG | - | chr1.1:49741803-49741822 | MS.gene30856:intron | 35.0% | |
| AAGCAGACAAAAGACAAGAA+AGG | + | chr1.1:49742522-49742541 | None:intergenic | 35.0% | |
| AAGGGATCAGGAAGAATTTA+AGG | - | chr1.1:49740512-49740531 | MS.gene30856:CDS | 35.0% | |
| ACAACAATCTTTGACGATCT+AGG | + | chr1.1:49740975-49740994 | None:intergenic | 35.0% | |
| ACCTATTGATGTCTATGGTA+TGG | + | chr1.1:49743211-49743230 | None:intergenic | 35.0% | |
| ACTTAAATAGACGTAGCAGA+CGG | - | chr1.1:49741357-49741376 | MS.gene30856:intron | 35.0% | |
| AGAAAATTATGCGGAGAACA+AGG | + | chr1.1:49741050-49741069 | None:intergenic | 35.0% | |
| AGAGGAAATAACAGCAACTT+TGG | - | chr1.1:49741322-49741341 | MS.gene30856:intron | 35.0% | |
| AGCAACAAATTCATTTGTGC+TGG | + | chr1.1:49743849-49743868 | None:intergenic | 35.0% | |
| ATCAATCTAGCTATAACACC+TGG | + | chr1.1:49740363-49740382 | None:intergenic | 35.0% | |
| CAAAGAAGAGATTATCAGAG+AGG | - | chr1.1:49741417-49741436 | MS.gene30856:intron | 35.0% | |
| CGAAGAAAATTCAATGCAAG+AGG | - | chr1.1:49742144-49742163 | MS.gene30856:intron | 35.0% | |
| GACAGATCATCTGTAAAAGA+AGG | + | chr1.1:49743013-49743032 | None:intergenic | 35.0% | |
| GAGGAAATAACAGCAACTTT+GGG | - | chr1.1:49741323-49741342 | MS.gene30856:intron | 35.0% | |
| GATTTAGTGGCAGAAATAGT+CGG | - | chr1.1:49744630-49744649 | MS.gene30856:CDS | 35.0% | |
| GGAAATTATGAGAAAACACG+TGG | + | chr1.1:49743190-49743209 | None:intergenic | 35.0% | |
| GGAATCTAGAGAAATTGCAA+AGG | - | chr1.1:49741181-49741200 | MS.gene30856:intron | 35.0% | |
| GTATCCTTTAAATCTAGGAG+AGG | + | chr1.1:49741258-49741277 | None:intergenic | 35.0% | |
| GTGATTTGACTACTTGTTCA+AGG | - | chr1.1:49744331-49744350 | MS.gene30856:CDS | 35.0% | |
| TAGTCACCTATTGATGTCTA+TGG | + | chr1.1:49743216-49743235 | None:intergenic | 35.0% | |
| TCAAAGTTCTCCATATTGGT+TGG | + | chr1.1:49740831-49740850 | None:intergenic | 35.0% | |
| TCAACACCAGATCATAGATT+TGG | + | chr1.1:49742397-49742416 | None:intergenic | 35.0% | |
| TCAATCTAGCTATAACACCT+GGG | + | chr1.1:49740362-49740381 | None:intergenic | 35.0% | |
| TCAATCTCTTAATGCCTTTG+AGG | - | chr1.1:49743581-49743600 | MS.gene30856:CDS | 35.0% | |
| TCATAAACAGCAACAACATC+AGG | - | chr1.1:49739998-49740017 | MS.gene30856:CDS | 35.0% | |
| TCATCTTCAGATTTGAAGGA+CGG | - | chr1.1:49740582-49740601 | MS.gene30856:intron | 35.0% | |
| TCATGTAGAACCAACCAATA+TGG | - | chr1.1:49740818-49740837 | MS.gene30856:intron | 35.0% | |
| TCCATACCATAGACATCAAT+AGG | - | chr1.1:49743207-49743226 | MS.gene30856:CDS | 35.0% | |
| TCTTCCTCTCCTAGATTTAA+AGG | - | chr1.1:49741251-49741270 | MS.gene30856:intron | 35.0% | |
| TGACAATTCCTGAATTGATG+CGG | + | chr1.1:49744380-49744399 | None:intergenic | 35.0% | |
| TGTAGACCTCACCTTATATT+TGG | - | chr1.1:49743126-49743145 | MS.gene30856:CDS | 35.0% | |
| TGTTCTGGCAGAAAATTATG+CGG | + | chr1.1:49741059-49741078 | None:intergenic | 35.0% | |
| TGTTTGAAGATCTGGAAGAT+AGG | - | chr1.1:49744304-49744323 | MS.gene30856:CDS | 35.0% | |
| TTAGAGAAAAATCGAAGCAG+AGG | - | chr1.1:49740453-49740472 | MS.gene30856:CDS | 35.0% | |
| TTATCCGAAGAAGATTCAGA+AGG | + | chr1.1:49742067-49742086 | None:intergenic | 35.0% | |
| TTCAATTTGCATGGTAGTCA+TGG | - | chr1.1:49743394-49743413 | MS.gene30856:CDS | 35.0% | |
| TTCTGAATCTTCTTCGGATA+AGG | - | chr1.1:49742066-49742085 | MS.gene30856:intron | 35.0% | |
| TTGTTAAGATATACACCCTC+CGG | + | chr1.1:49743756-49743775 | None:intergenic | 35.0% | |
| TTTGGCAATTTCATAGCTAG+AGG | + | chr1.1:49742379-49742398 | None:intergenic | 35.0% | |
| ! | AATGATAAGTTTGCTCGCAA+CGG | - | chr1.1:49741572-49741591 | MS.gene30856:CDS | 35.0% |
| ! | AGAAGATTCACCCAATTTTG+AGG | - | chr1.1:49741952-49741971 | MS.gene30856:intron | 35.0% |
| ! | AGGTGTTATAGCTAGATTGA+TGG | - | chr1.1:49740362-49740381 | MS.gene30856:CDS | 35.0% |
| ! | CATAATTTTCTGCCAGAACA+TGG | - | chr1.1:49741059-49741078 | MS.gene30856:intron | 35.0% |
| ! | CTGCTTCGATTTTTCTCTAA+AGG | + | chr1.1:49740453-49740472 | None:intergenic | 35.0% |
| ! | GGTGTTATAGCTAGATTGAT+GGG | - | chr1.1:49740363-49740382 | MS.gene30856:CDS | 35.0% |
| ! | GTCTTTTAGGCACAATTCTT+TGG | - | chr1.1:49741160-49741179 | MS.gene30856:intron | 35.0% |
| ! | TGTTTCTGTGTTTGAAGATC+TGG | - | chr1.1:49744296-49744315 | MS.gene30856:CDS | 35.0% |
| !! | AAAGTTGCTGTTATTTCCTC+TGG | + | chr1.1:49741323-49741342 | None:intergenic | 35.0% |
| ACAGATGATTCACTAGAACG+TGG | + | chr1.1:49741386-49741405 | None:intergenic | 40.0% | |
| AGAAGAGATTATCAGAGAGG+TGG | - | chr1.1:49741420-49741439 | MS.gene30856:intron | 40.0% | |
| AGAGTTCCATGATACACTTG+AGG | - | chr1.1:49740686-49740705 | MS.gene30856:intron | 40.0% | |
| ATAGTTCAAGCAGTGCTTCT+GGG | - | chr1.1:49741288-49741307 | MS.gene30856:intron | 40.0% | |
| ATATTTCAGGACGTATCAGC+TGG | - | chr1.1:49742884-49742903 | MS.gene30856:CDS | 40.0% | |
| ATCAAGAACTGAGATTGGAC+TGG | + | chr1.1:49742990-49743009 | None:intergenic | 40.0% | |
| ATGGAGAACTGAAGATAGCT+GGG | - | chr1.1:49744173-49744192 | MS.gene30856:CDS | 40.0% | |
| ATTATCAGAGAGGTGGAAGA+TGG | - | chr1.1:49741427-49741446 | MS.gene30856:intron | 40.0% | |
| CAAACACAGAAACACTCACA+GGG | + | chr1.1:49744290-49744309 | None:intergenic | 40.0% | |
| CAAGGTTGCAGAGAAAGATT+CGG | - | chr1.1:49740052-49740071 | MS.gene30856:CDS | 40.0% | |
| CAATCTAGCTATAACACCTG+GGG | + | chr1.1:49740361-49740380 | None:intergenic | 40.0% | |
| CTACTTGTTCAAGGTCTGAA+AGG | - | chr1.1:49744340-49744359 | MS.gene30856:CDS | 40.0% | |
| GAAAAATCGAAGCAGAGGAA+CGG | - | chr1.1:49740458-49740477 | MS.gene30856:CDS | 40.0% | |
| GAAAATCTTGATACGTCGCT+AGG | + | chr1.1:49740656-49740675 | None:intergenic | 40.0% | |
| GAAGGATCAAGAACTGAGAT+TGG | + | chr1.1:49742995-49743014 | None:intergenic | 40.0% | |
| GGGTGAATCTTCTTCAAGAT+TGG | + | chr1.1:49741945-49741964 | None:intergenic | 40.0% | |
| GTCTTAGTATATACACCCTC+CGG | - | chr1.1:49743603-49743622 | MS.gene30856:CDS | 40.0% | |
| TAAATTTGCCTGACAGTGCA+AGG | - | chr1.1:49741138-49741157 | MS.gene30856:intron | 40.0% | |
| TAAGGTTCTTCCTGGATCAT+CGG | - | chr1.1:49742084-49742103 | MS.gene30856:intron | 40.0% | |
| TACCAGTTTCCTTACCTTGT+AGG | + | chr1.1:49743072-49743091 | None:intergenic | 40.0% | |
| TACCCTTCATTCTCTTACCA+GGG | + | chr1.1:49741517-49741536 | None:intergenic | 40.0% | |
| TATCTGGTCACAAGAAGTCT+TGG | - | chr1.1:49741846-49741865 | MS.gene30856:intron | 40.0% | |
| TATGGAGAACTGAAGATAGC+TGG | - | chr1.1:49744172-49744191 | MS.gene30856:CDS | 40.0% | |
| TCAAACACAGAAACACTCAC+AGG | + | chr1.1:49744291-49744310 | None:intergenic | 40.0% | |
| TCAAGAACTGAGATTGGACT+GGG | + | chr1.1:49742989-49743008 | None:intergenic | 40.0% | |
| TCAGCATGATTTCCATGTTC+TGG | + | chr1.1:49741074-49741093 | None:intergenic | 40.0% | |
| TCGTCACTTGAAACTAGCAT+AGG | + | chr1.1:49744108-49744127 | None:intergenic | 40.0% | |
| TGAATCATCTGTGAGTAGAG+AGG | - | chr1.1:49741394-49741413 | MS.gene30856:intron | 40.0% | |
| TGATCAGCATCTTTACAGCA+TGG | + | chr1.1:49742965-49742984 | None:intergenic | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | - | chr1.1:49743738-49743757 | MS.gene30856:CDS | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | + | chr1.1:49743757-49743738 | None:intergenic | 40.0% | |
| TTCCCTGGTAAGAGAATGAA+GGG | - | chr1.1:49741512-49741531 | MS.gene30856:intron | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | - | chr1.1:49743737-49743756 | MS.gene30856:CDS | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | + | chr1.1:49743756-49743737 | None:intergenic | 40.0% | |
| ! | AGAAATGCAGCCAAACCTTT+TGG | - | chr1.1:49744438-49744457 | MS.gene30856:intron | 40.0% |
| ! | ATAGCAAGGGTGTGTTTCAT+GGG | - | chr1.1:49743517-49743536 | MS.gene30856:CDS | 40.0% |
| ! | ATGGTCTTTTCCAGATGCTA+GGG | - | chr1.1:49744487-49744506 | MS.gene30856:intron | 40.0% |
| ! | CTAGTTTCAAGTGACGAAGA+TGG | - | chr1.1:49744111-49744130 | MS.gene30856:CDS | 40.0% |
| ! | GAAAGGTTTGAAGCAGAAGA+TGG | + | chr1.1:49743883-49743902 | None:intergenic | 40.0% |
| ! | TGATCGATATATGGTGCCAA+AGG | - | chr1.1:49741751-49741770 | MS.gene30856:intron | 40.0% |
| ! | TGTCGCCTTTTACTAAGACA+CGG | + | chr1.1:49742111-49742130 | None:intergenic | 40.0% |
| ! | TTGTTATTAGGCTGCTGAGA+TGG | + | chr1.1:49740402-49740421 | None:intergenic | 40.0% |
| ! | TTTATCTCTAAGGGGCTCAA+AGG | + | chr1.1:49741993-49742012 | None:intergenic | 40.0% |
| !! | ATGATTAACGGGCTTCAAGA+TGG | - | chr1.1:49744468-49744487 | MS.gene30856:intron | 40.0% |
| !! | ATTGGTTGGTTCTACATGAC+CGG | + | chr1.1:49740817-49740836 | None:intergenic | 40.0% |
| !! | TCCTTGTGCTGCTTGTTATT+AGG | + | chr1.1:49740414-49740433 | None:intergenic | 40.0% |
| !! | TCTCCTGATTCTAGTTTCTC+CGG | - | chr1.1:49740026-49740045 | MS.gene30856:CDS | 40.0% |
| !!! | TTCACCCAATTTTGAGGTTC+AGG | - | chr1.1:49741958-49741977 | MS.gene30856:intron | 40.0% |
| AAAGGTAGAGGATGATGTCC+TGG | - | chr1.1:49744518-49744537 | MS.gene30856:intron | 45.0% | |
| AAGGTAGAGGATGATGTCCT+GGG | - | chr1.1:49744519-49744538 | MS.gene30856:intron | 45.0% | |
| ACCCCTTTCCAATCACATTC+CGG | - | chr1.1:49740795-49740814 | MS.gene30856:intron | 45.0% | |
| ACCGGAATGTGATTGGAAAG+GGG | + | chr1.1:49740799-49740818 | None:intergenic | 45.0% | |
| ACCTACCACTCTCTACCTTT+GGG | + | chr1.1:49740560-49740579 | None:intergenic | 45.0% | |
| AGGAGCCTGAACCTCAAAAT+TGG | + | chr1.1:49741966-49741985 | None:intergenic | 45.0% | |
| AGTGGTTCAACCAACTCAGA+AGG | + | chr1.1:49741602-49741621 | None:intergenic | 45.0% | |
| ATCGTCTAGAAGGAGCTCAA+GGG | - | chr1.1:49740494-49740513 | MS.gene30856:CDS | 45.0% | |
| CAACAGGGGTGAATTACAAC+AGG | - | chr1.1:49740883-49740902 | MS.gene30856:intron | 45.0% | |
| CAGATTCCAACTTCAGCAAC+TGG | + | chr1.1:49744068-49744087 | None:intergenic | 45.0% | |
| CATCATCCTCTACCTTTCCT+TGG | + | chr1.1:49744515-49744534 | None:intergenic | 45.0% | |
| CATGAAACACACCCTTGCTA+TGG | + | chr1.1:49743518-49743537 | None:intergenic | 45.0% | |
| CCAAAGACAGTAGATGAAGC+AGG | + | chr1.1:49741692-49741711 | None:intergenic | 45.0% | |
| CCTGCTTCATCTACTGTCTT+TGG | - | chr1.1:49741689-49741708 | MS.gene30856:CDS | 45.0% | |
| CTAAAAGACCTTGCACTGTC+AGG | + | chr1.1:49741149-49741168 | None:intergenic | 45.0% | |
| CTACATGACCGGAATGTGAT+TGG | + | chr1.1:49740806-49740825 | None:intergenic | 45.0% | |
| CTTCTCTTGGATTCAGTTGC+TGG | + | chr1.1:49740336-49740355 | None:intergenic | 45.0% | |
| GAATCTGAAGACCATGTGGA+GGG | - | chr1.1:49744081-49744100 | MS.gene30856:CDS | 45.0% | |
| GACCGGAATGTGATTGGAAA+GGG | + | chr1.1:49740800-49740819 | None:intergenic | 45.0% | |
| GACCTACAAGGTAAGGAAAC+TGG | - | chr1.1:49743067-49743086 | MS.gene30856:CDS | 45.0% | |
| GATAGTTCAAGCAGTGCTTC+TGG | - | chr1.1:49741287-49741306 | MS.gene30856:intron | 45.0% | |
| GCCTAATAACAAGCAGCACA+AGG | - | chr1.1:49740410-49740429 | MS.gene30856:CDS | 45.0% | |
| GGAGCCTGAACCTCAAAATT+GGG | + | chr1.1:49741965-49741984 | None:intergenic | 45.0% | |
| GTACCCTTCATTCTCTTACC+AGG | + | chr1.1:49741518-49741537 | None:intergenic | 45.0% | |
| GTTCCCTGGTAAGAGAATGA+AGG | - | chr1.1:49741511-49741530 | MS.gene30856:intron | 45.0% | |
| GTTGGAATCTGAAGACCATG+TGG | - | chr1.1:49744077-49744096 | MS.gene30856:CDS | 45.0% | |
| TACCTACCACTCTCTACCTT+TGG | + | chr1.1:49740561-49740580 | None:intergenic | 45.0% | |
| TCAGCACGCAAGAATGTTCT+AGG | + | chr1.1:49741719-49741738 | None:intergenic | 45.0% | |
| TCTTCGGATAAGGTTCTTCC+TGG | - | chr1.1:49742076-49742095 | MS.gene30856:intron | 45.0% | |
| TGACCGGAATGTGATTGGAA+AGG | + | chr1.1:49740801-49740820 | None:intergenic | 45.0% | |
| TGGGCCTTCTGAATCTTCTT+CGG | - | chr1.1:49742060-49742079 | MS.gene30856:intron | 45.0% | |
| TTGAGCTCCTTCTAGACGAT+CGG | + | chr1.1:49740494-49740513 | None:intergenic | 45.0% | |
| TTGCGCAAAACGTGTAGTGA+AGG | + | chr1.1:49742495-49742514 | None:intergenic | 45.0% | |
| ! | AAGCATCGCGATGGTTATCA+TGG | - | chr1.1:49740915-49740934 | MS.gene30856:intron | 45.0% |
| ! | AGTTGCTGATTGAGGAGTCT+CGG | - | chr1.1:49744544-49744563 | MS.gene30856:intron | 45.0% |
| ! | CATAGCAAGGGTGTGTTTCA+TGG | - | chr1.1:49743516-49743535 | MS.gene30856:CDS | 45.0% |
| ! | CTGACAGTGCAAGGTCTTTT+AGG | - | chr1.1:49741147-49741166 | MS.gene30856:intron | 45.0% |
| ! | CTTTTCGACCGCATCAATTC+AGG | - | chr1.1:49744369-49744388 | MS.gene30856:CDS | 45.0% |
| ! | GATGGTCTTTTCCAGATGCT+AGG | - | chr1.1:49744486-49744505 | MS.gene30856:intron | 45.0% |
| ! | GCTAGATTGATGGGTCTTGA+CGG | - | chr1.1:49740372-49740391 | MS.gene30856:CDS | 45.0% |
| ! | GTCGCCTTTTACTAAGACAC+GGG | + | chr1.1:49742110-49742129 | None:intergenic | 45.0% |
| ! | TCGCACGTCTTTTGTCGAAT+TGG | + | chr1.1:49740941-49740960 | None:intergenic | 45.0% |
| ! | TGGTGCCAAAGGACCTTAAA+CGG | - | chr1.1:49741762-49741781 | MS.gene30856:intron | 45.0% |
| ! | TTCTGGGAATGAATCTCCAG+AGG | - | chr1.1:49741304-49741323 | MS.gene30856:intron | 45.0% |
| !! | TCTGAGTTGGTTGAACCACT+GGG | - | chr1.1:49741602-49741621 | MS.gene30856:CDS | 45.0% |
| !! | TTCTGAGTTGGTTGAACCAC+TGG | - | chr1.1:49741601-49741620 | MS.gene30856:CDS | 45.0% |
| !! | TTTCATCAGAAGCATCGCGA+TGG | - | chr1.1:49740906-49740925 | MS.gene30856:intron | 45.0% |
| AACACCTGGGGATCTTCTCT+TGG | + | chr1.1:49740349-49740368 | None:intergenic | 50.0% | |
| AATCTACTGACCCACAGCCA+TGG | - | chr1.1:49744412-49744431 | MS.gene30856:intron | 50.0% | |
| AGCAGAGGAACGGCAAATGA+CGG | - | chr1.1:49740468-49740487 | MS.gene30856:CDS | 50.0% | |
| AGGGAACCAAGGAAAGGTAG+AGG | - | chr1.1:49744506-49744525 | MS.gene30856:intron | 50.0% | |
| AGGTCAGATAGGGAGTCAAC+AGG | - | chr1.1:49740867-49740886 | MS.gene30856:intron | 50.0% | |
| ATCTACTGACCCACAGCCAT+GGG | - | chr1.1:49744413-49744432 | MS.gene30856:intron | 50.0% | |
| CAAAGGACCTTAAACGGGAG+AGG | - | chr1.1:49741768-49741787 | MS.gene30856:intron | 50.0% | |
| CAGCATGGAGATTCATGTCC+AGG | + | chr1.1:49742950-49742969 | None:intergenic | 50.0% | |
| CATTTCTCACCCATGGCTGT+GGG | + | chr1.1:49744425-49744444 | None:intergenic | 50.0% | |
| CCAACGCCTCAAGTGTATCA+TGG | + | chr1.1:49740695-49740714 | None:intergenic | 50.0% | |
| CCACCGGAGAAACTAGAATC+AGG | + | chr1.1:49740032-49740051 | None:intergenic | 50.0% | |
| CCATGATACACTTGAGGCGT+TGG | - | chr1.1:49740692-49740711 | MS.gene30856:intron | 50.0% | |
| CTAAGGGGCTCAAAGGTTTC+AGG | + | chr1.1:49741986-49742005 | None:intergenic | 50.0% | |
| CTCTTCTCCTCTCCCGTTTA+AGG | + | chr1.1:49741778-49741797 | None:intergenic | 50.0% | |
| GAATCCAAGAGAAGATCCCC+AGG | - | chr1.1:49740342-49740361 | MS.gene30856:CDS | 50.0% | |
| GAGATCCCAAAGGTAGAGAG+TGG | - | chr1.1:49740552-49740571 | MS.gene30856:CDS | 50.0% | |
| GATCGTCTAGAAGGAGCTCA+AGG | - | chr1.1:49740493-49740512 | MS.gene30856:CDS | 50.0% | |
| GATGCTAGGGAACCAAGGAA+AGG | - | chr1.1:49744500-49744519 | MS.gene30856:intron | 50.0% | |
| GATGGCACACAAGTCTCAAG+AGG | - | chr1.1:49741445-49741464 | MS.gene30856:intron | 50.0% | |
| GCAACTCCAGTTGCTGAAGT+TGG | - | chr1.1:49744059-49744078 | MS.gene30856:CDS | 50.0% | |
| GGAATCTGAAGACCATGTGG+AGG | - | chr1.1:49744080-49744099 | MS.gene30856:CDS | 50.0% | |
| GGAGATTCATGTCCAGGTAC+AGG | + | chr1.1:49742944-49742963 | None:intergenic | 50.0% | |
| GGTCAGATAGGGAGTCAACA+GGG | - | chr1.1:49740868-49740887 | MS.gene30856:intron | 50.0% | |
| GGTGCCAAAGGACCTTAAAC+GGG | - | chr1.1:49741763-49741782 | MS.gene30856:intron | 50.0% | |
| GTATCAGCAGCAAGGATGGT+TGG | - | chr1.1:49741624-49741643 | MS.gene30856:CDS | 50.0% | |
| GTCAGATAGGGAGTCAACAG+GGG | - | chr1.1:49740869-49740888 | MS.gene30856:intron | 50.0% | |
| GTCTGTGCATTCACTGAAGC+AGG | - | chr1.1:49741868-49741887 | MS.gene30856:intron | 50.0% | |
| TAGAAGGAGCTCAAGGGATC+AGG | - | chr1.1:49740500-49740519 | MS.gene30856:CDS | 50.0% | |
| TCATTGAAACCTTCCCCGCT+AGG | + | chr1.1:49741557-49741576 | None:intergenic | 50.0% | |
| TCCCAAAGGTAGAGAGTGGT+AGG | - | chr1.1:49740556-49740575 | MS.gene30856:CDS | 50.0% | |
| TCGGCCCGTGTCTTAGTAAA+AGG | - | chr1.1:49742103-49742122 | MS.gene30856:intron | 50.0% | |
| TGAGGTCTCAGAGATCCCAA+AGG | - | chr1.1:49740542-49740561 | MS.gene30856:CDS | 50.0% | |
| TTCAAGTGACGAAGATGGCG+TGG | - | chr1.1:49744116-49744135 | MS.gene30856:CDS | 50.0% | |
| TTCCAGATGCTAGGGAACCA+AGG | - | chr1.1:49744495-49744514 | MS.gene30856:intron | 50.0% | |
| TTCCTTGGTTCCCTAGCATC+TGG | + | chr1.1:49744500-49744519 | None:intergenic | 50.0% | |
| TTGATACGTCGCTAGGCGTT+TGG | + | chr1.1:49740649-49740668 | None:intergenic | 50.0% | |
| TTGGCTGCATTTCTCACCCA+TGG | + | chr1.1:49744432-49744451 | None:intergenic | 50.0% | |
| TTTCTCTGCAACCTTGCCAC+CGG | + | chr1.1:49740048-49740067 | None:intergenic | 50.0% | |
| ! | CACAAGTCTCAAGAGGTGCA+AGG | - | chr1.1:49741452-49741471 | MS.gene30856:intron | 50.0% |
| ! | CTCTCCCGTTTAAGGTCCTT+TGG | + | chr1.1:49741770-49741789 | None:intergenic | 50.0% |
| !! | AGTGTCAGTGCTGACCTACA+AGG | - | chr1.1:49743055-49743074 | MS.gene30856:CDS | 50.0% |
| !! | CAGTGCTGACCTACAAGGTA+AGG | - | chr1.1:49743060-49743079 | MS.gene30856:CDS | 50.0% |
| !! | CCTGATTCTAGTTTCTCCGG+TGG | - | chr1.1:49740029-49740048 | MS.gene30856:CDS | 50.0% |
| !! | GACGTATCAGCTGGTTCTAC+TGG | - | chr1.1:49742893-49742912 | MS.gene30856:CDS | 50.0% |
| !! | GTATCAGCTGGTTCTACTGG+TGG | - | chr1.1:49742896-49742915 | MS.gene30856:CDS | 50.0% |
| !! | TGAGGCGTTGGACTCTAACA+AGG | - | chr1.1:49740704-49740723 | MS.gene30856:intron | 50.0% |
| !! | TTCTAGTTTCTCCGGTGGCA+AGG | - | chr1.1:49740034-49740053 | MS.gene30856:CDS | 50.0% |
| ACCACTGGGTATCAGCAGCA+AGG | - | chr1.1:49741616-49741635 | MS.gene30856:CDS | 55.0% | |
| ATGACGGCCGATCGTCTAGA+AGG | - | chr1.1:49740484-49740503 | MS.gene30856:CDS | 55.0% | |
| CAACGGCGAACCTTCTGAGT+TGG | - | chr1.1:49741589-49741608 | MS.gene30856:CDS | 55.0% | |
| CAGCAGCAAGGATGGTTGGA+GGG | - | chr1.1:49741628-49741647 | MS.gene30856:CDS | 55.0% | |
| CAGGTACAGGTGCTTCAGAG+AGG | + | chr1.1:49742931-49742950 | None:intergenic | 55.0% | |
| CCTCAATCAGCAACTTGCCC+AGG | + | chr1.1:49744539-49744558 | None:intergenic | 55.0% | |
| CTAGCATAGGTCCCTCCACA+TGG | + | chr1.1:49744095-49744114 | None:intergenic | 55.0% | |
| CTGGGTATCAGCAGCAAGGA+TGG | - | chr1.1:49741620-49741639 | MS.gene30856:CDS | 55.0% | |
| GCATTTCTCACCCATGGCTG+TGG | + | chr1.1:49744426-49744445 | None:intergenic | 55.0% | |
| GCTGATATGCTAGCGTTCCC+TGG | - | chr1.1:49741497-49741516 | MS.gene30856:intron | 55.0% | |
| TCAGCAGCAAGGATGGTTGG+AGG | - | chr1.1:49741627-49741646 | MS.gene30856:CDS | 55.0% | |
| TCCTTGCTGCTGATACCCAG+TGG | + | chr1.1:49741620-49741639 | None:intergenic | 55.0% | |
| ! | CCTGGGCAAGTTGCTGATTG+AGG | - | chr1.1:49744536-49744555 | MS.gene30856:intron | 55.0% |
| ! | TGCTGATTGAGGAGTCTCGG+TGG | - | chr1.1:49744547-49744566 | MS.gene30856:intron | 55.0% |
| ! | TTTTGACAGCCTGCCTAGCG+GGG | - | chr1.1:49741541-49741560 | MS.gene30856:intron | 55.0% |
| !! | CGTTTTGACAGCCTGCCTAG+CGG | - | chr1.1:49741539-49741558 | MS.gene30856:intron | 55.0% |
| !! | CTCTCTGAAGCACCTGTACC+TGG | - | chr1.1:49742929-49742948 | MS.gene30856:CDS | 55.0% |
| !! | GTTTTGACAGCCTGCCTAGC+GGG | - | chr1.1:49741540-49741559 | MS.gene30856:intron | 55.0% |
| AAGACACGGGCCGATGATCC+AGG | + | chr1.1:49742097-49742116 | None:intergenic | 60.0% | |
| CACCAGCAGGAGCAGCACAT+TGG | - | chr1.1:49741475-49741494 | MS.gene30856:intron | 60.0% | |
| TGAAACCTTCCCCGCTAGGC+AGG | + | chr1.1:49741553-49741572 | None:intergenic | 60.0% | |
| ! | AAGAGGTGCAAGGCACCAGC+AGG | - | chr1.1:49741462-49741481 | MS.gene30856:intron | 60.0% |
| ! | AGCCAATGTGCTGCTCCTGC+TGG | + | chr1.1:49741480-49741499 | None:intergenic | 60.0% |
| GACAGCCTGCCTAGCGGGGA+AGG | - | chr1.1:49741545-49741564 | MS.gene30856:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 49739985 | 49744659 | 49739985 | ID=MS.gene30856 |
| chr1.1 | mRNA | 49739985 | 49744659 | 49739985 | ID=MS.gene30856.t1;Parent=MS.gene30856 |
| chr1.1 | exon | 49744571 | 49744659 | 49744571 | ID=MS.gene30856.t1.exon1;Parent=MS.gene30856.t1 |
| chr1.1 | CDS | 49744571 | 49744659 | 49744571 | ID=cds.MS.gene30856.t1;Parent=MS.gene30856.t1 |
| chr1.1 | exon | 49742479 | 49744392 | 49742479 | ID=MS.gene30856.t1.exon2;Parent=MS.gene30856.t1 |
| chr1.1 | CDS | 49742479 | 49744392 | 49742479 | ID=cds.MS.gene30856.t1;Parent=MS.gene30856.t1 |
| chr1.1 | exon | 49741568 | 49741751 | 49741568 | ID=MS.gene30856.t1.exon3;Parent=MS.gene30856.t1 |
| chr1.1 | CDS | 49741568 | 49741751 | 49741568 | ID=cds.MS.gene30856.t1;Parent=MS.gene30856.t1 |
| chr1.1 | exon | 49739985 | 49740595 | 49739985 | ID=MS.gene30856.t1.exon4;Parent=MS.gene30856.t1 |
| chr1.1 | CDS | 49739985 | 49740595 | 49739985 | ID=cds.MS.gene30856.t1;Parent=MS.gene30856.t1 |
| Gene Sequence |
| Protein sequence |
