Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30862.t1 | XP_024634706.1 | 96.4 | 411 | 3 | 1 | 1 | 399 | 18 | 428 | 2.00E-226 | 794.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30862.t1 | Q8VZC0 | 80.6 | 418 | 57 | 3 | 3 | 398 | 20 | 435 | 9.7e-193 | 674.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30862.t1 | A0A072VW87 | 89.4 | 443 | 3 | 1 | 1 | 399 | 18 | 460 | 7.5e-223 | 782.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064542 | MS.gene30862 | PPI |
| MS.gene30862 | MS.gene07219 | PPI |
| MS.gene20737 | MS.gene30862 | PPI |
| MS.gene005596 | MS.gene30862 | PPI |
| MS.gene035805 | MS.gene30862 | PPI |
| MS.gene30862 | MS.gene73119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30862.t1 | MTR_1g067530 | 89.391 | 443 | 3 | 1 | 1 | 399 | 18 | 460 | 0.0 | 792 |
| MS.gene30862.t1 | MTR_1g088480 | 71.394 | 409 | 98 | 3 | 8 | 397 | 19 | 427 | 0.0 | 579 |
| MS.gene30862.t1 | MTR_4g120030 | 70.305 | 394 | 100 | 5 | 17 | 395 | 28 | 419 | 0.0 | 545 |
| MS.gene30862.t1 | MTR_4g063600 | 69.508 | 305 | 83 | 2 | 95 | 389 | 32 | 336 | 1.54e-153 | 437 |
| MS.gene30862.t1 | MTR_4g063600 | 68.831 | 308 | 83 | 2 | 95 | 389 | 32 | 339 | 3.31e-153 | 436 |
| MS.gene30862.t1 | MTR_2g096660 | 68.831 | 308 | 83 | 2 | 95 | 389 | 38 | 345 | 9.80e-152 | 433 |
| MS.gene30862.t1 | MTR_7g115080 | 26.667 | 330 | 205 | 10 | 93 | 395 | 40 | 359 | 1.29e-23 | 101 |
| MS.gene30862.t1 | MTR_7g115080 | 26.667 | 330 | 205 | 10 | 93 | 395 | 61 | 380 | 1.44e-23 | 102 |
| MS.gene30862.t1 | MTR_7g115080 | 26.667 | 330 | 205 | 10 | 93 | 395 | 27 | 346 | 1.44e-23 | 101 |
| MS.gene30862.t1 | MTR_1g080950 | 26.087 | 322 | 212 | 8 | 93 | 392 | 26 | 343 | 3.27e-23 | 100 |
| MS.gene30862.t1 | MTR_1g080950 | 25.915 | 328 | 216 | 9 | 93 | 398 | 62 | 384 | 4.06e-23 | 100 |
| MS.gene30862.t1 | MTR_1g009600 | 25.312 | 320 | 203 | 12 | 97 | 387 | 7 | 319 | 1.02e-22 | 100 |
| MS.gene30862.t1 | MTR_2g073240 | 27.010 | 311 | 191 | 12 | 97 | 378 | 21 | 324 | 1.47e-21 | 97.4 |
| MS.gene30862.t1 | MTR_0034s0060 | 26.367 | 311 | 193 | 12 | 97 | 378 | 139 | 442 | 2.49e-20 | 93.6 |
| MS.gene30862.t1 | MTR_4g056100 | 25.989 | 354 | 189 | 15 | 93 | 378 | 17 | 365 | 4.09e-19 | 88.6 |
| MS.gene30862.t1 | MTR_4g053420 | 24.138 | 348 | 196 | 14 | 95 | 378 | 14 | 357 | 3.63e-18 | 85.9 |
| MS.gene30862.t1 | MTR_1g107455 | 26.554 | 354 | 187 | 14 | 93 | 378 | 17 | 365 | 1.26e-17 | 84.3 |
| MS.gene30862.t1 | MTR_0354s0040 | 25.255 | 392 | 232 | 14 | 45 | 387 | 32 | 411 | 1.43e-16 | 81.3 |
| MS.gene30862.t1 | MTR_4g102270 | 23.765 | 425 | 261 | 14 | 1 | 378 | 5 | 413 | 2.17e-15 | 77.8 |
| MS.gene30862.t1 | MTR_4g056100 | 25.850 | 294 | 160 | 13 | 93 | 332 | 17 | 306 | 4.90e-15 | 75.9 |
| MS.gene30862.t1 | MTR_4g134490 | 28.814 | 354 | 187 | 19 | 94 | 395 | 24 | 364 | 1.10e-14 | 75.5 |
| MS.gene30862.t1 | MTR_8g099535 | 26.480 | 321 | 185 | 14 | 97 | 371 | 6 | 321 | 1.78e-14 | 74.3 |
| MS.gene30862.t1 | MTR_4g134490 | 28.652 | 356 | 191 | 19 | 94 | 395 | 24 | 370 | 2.43e-14 | 74.3 |
| MS.gene30862.t1 | MTR_5g011940 | 25.852 | 352 | 201 | 12 | 92 | 393 | 87 | 428 | 2.78e-14 | 74.3 |
| MS.gene30862.t1 | MTR_1g108530 | 24.776 | 335 | 199 | 12 | 93 | 378 | 17 | 347 | 3.96e-14 | 73.6 |
| MS.gene30862.t1 | MTR_4g024600 | 25.000 | 340 | 198 | 11 | 95 | 387 | 101 | 430 | 4.91e-14 | 73.6 |
| MS.gene30862.t1 | MTR_4g129820 | 24.484 | 339 | 197 | 12 | 95 | 385 | 95 | 422 | 6.66e-14 | 73.2 |
| MS.gene30862.t1 | MTR_4g056100 | 25.283 | 265 | 148 | 10 | 93 | 309 | 17 | 279 | 1.83e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30862.t1 | AT3G53520 | 79.904 | 418 | 60 | 3 | 3 | 398 | 20 | 435 | 0.0 | 672 |
| MS.gene30862.t1 | AT3G53520 | 79.665 | 418 | 59 | 4 | 3 | 398 | 20 | 433 | 0.0 | 666 |
| MS.gene30862.t1 | AT3G53520 | 75.964 | 441 | 59 | 4 | 3 | 398 | 20 | 458 | 0.0 | 661 |
| MS.gene30862.t1 | AT3G62830 | 68.765 | 413 | 104 | 5 | 8 | 395 | 20 | 432 | 0.0 | 565 |
| MS.gene30862.t1 | AT3G62830 | 68.765 | 413 | 104 | 5 | 8 | 395 | 20 | 432 | 0.0 | 565 |
| MS.gene30862.t1 | AT2G47650 | 67.299 | 422 | 102 | 6 | 4 | 394 | 16 | 432 | 0.0 | 560 |
| MS.gene30862.t1 | AT2G47650 | 66.589 | 428 | 101 | 7 | 4 | 394 | 16 | 438 | 0.0 | 555 |
| MS.gene30862.t1 | AT3G53520 | 78.438 | 320 | 45 | 3 | 3 | 300 | 20 | 337 | 6.33e-179 | 502 |
| MS.gene30862.t1 | AT2G28760 | 68.831 | 308 | 83 | 2 | 95 | 389 | 31 | 338 | 1.76e-154 | 439 |
| MS.gene30862.t1 | AT2G28760 | 68.831 | 308 | 83 | 2 | 95 | 389 | 31 | 338 | 1.76e-154 | 439 |
| MS.gene30862.t1 | AT2G28760 | 68.831 | 308 | 83 | 2 | 95 | 389 | 31 | 338 | 1.76e-154 | 439 |
| MS.gene30862.t1 | AT2G28760 | 68.831 | 308 | 83 | 2 | 95 | 389 | 62 | 369 | 2.11e-154 | 441 |
| MS.gene30862.t1 | AT3G46440 | 68.506 | 308 | 84 | 2 | 95 | 389 | 29 | 336 | 3.27e-154 | 439 |
| MS.gene30862.t1 | AT3G46440 | 68.506 | 308 | 84 | 2 | 95 | 389 | 29 | 336 | 3.27e-154 | 439 |
| MS.gene30862.t1 | AT5G59290 | 68.506 | 308 | 84 | 2 | 95 | 389 | 30 | 337 | 4.31e-154 | 439 |
| MS.gene30862.t1 | AT5G59290 | 68.506 | 308 | 84 | 2 | 95 | 389 | 1 | 308 | 5.73e-154 | 437 |
| MS.gene30862.t1 | AT5G59290 | 68.506 | 308 | 84 | 2 | 95 | 389 | 45 | 352 | 6.92e-154 | 439 |
| MS.gene30862.t1 | AT5G59290 | 68.506 | 308 | 84 | 2 | 95 | 389 | 23 | 330 | 2.21e-153 | 436 |
| MS.gene30862.t1 | AT3G14790 | 27.476 | 313 | 187 | 11 | 97 | 378 | 12 | 315 | 1.09e-22 | 100 |
| MS.gene30862.t1 | AT3G14790 | 27.476 | 313 | 187 | 11 | 97 | 378 | 9 | 312 | 1.36e-22 | 100 |
| MS.gene30862.t1 | AT1G53500 | 25.879 | 313 | 192 | 11 | 97 | 378 | 11 | 314 | 1.45e-21 | 97.4 |
| MS.gene30862.t1 | AT5G28840 | 26.250 | 320 | 210 | 8 | 95 | 392 | 28 | 343 | 3.41e-21 | 94.7 |
| MS.gene30862.t1 | AT5G28840 | 26.250 | 320 | 210 | 8 | 95 | 392 | 28 | 343 | 3.41e-21 | 94.7 |
| MS.gene30862.t1 | AT1G78570 | 27.157 | 313 | 188 | 11 | 97 | 378 | 9 | 312 | 8.85e-21 | 95.1 |
| MS.gene30862.t1 | AT2G27860 | 25.852 | 352 | 188 | 15 | 95 | 378 | 18 | 364 | 2.76e-19 | 89.4 |
| MS.gene30862.t1 | AT1G08200 | 25.568 | 352 | 189 | 15 | 95 | 378 | 18 | 364 | 1.48e-18 | 87.0 |
| MS.gene30862.t1 | AT2G45310 | 25.075 | 335 | 194 | 11 | 95 | 382 | 97 | 421 | 5.18e-15 | 76.6 |
| MS.gene30862.t1 | AT4G00110 | 24.490 | 392 | 229 | 15 | 35 | 378 | 39 | 411 | 3.25e-14 | 74.3 |
| MS.gene30862.t1 | AT4G23920 | 26.901 | 342 | 193 | 16 | 97 | 391 | 5 | 336 | 6.44e-14 | 72.8 |
| MS.gene30862.t1 | AT1G02000 | 24.495 | 396 | 230 | 16 | 35 | 382 | 42 | 416 | 1.39e-13 | 72.4 |
| MS.gene30862.t1 | AT4G10960 | 27.089 | 347 | 194 | 17 | 97 | 395 | 6 | 341 | 3.45e-13 | 70.9 |
| MS.gene30862.t1 | AT4G30440 | 24.699 | 332 | 199 | 11 | 95 | 382 | 88 | 412 | 1.22e-12 | 69.3 |
| MS.gene30862.t1 | AT3G23820 | 25.826 | 333 | 194 | 14 | 95 | 382 | 112 | 436 | 5.19e-12 | 67.8 |
| MS.gene30862.t1 | AT4G12250 | 24.009 | 429 | 263 | 14 | 7 | 385 | 8 | 423 | 1.06e-11 | 66.6 |
Find 120 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATTTGGTTCATTTGTT+TGG | 0.184646 | 1.1:+49694100 | MS.gene30862:CDS |
| TACTGGGAGGAAAGAAAATT+TGG | 0.207487 | 1.1:+49694087 | MS.gene30862:CDS |
| CTCTGATGGTTAGTGATTTC+CGG | 0.215949 | 1.1:+49698436 | MS.gene30862:CDS |
| TCCTTTGCTTTGCTAATATC+TGG | 0.222306 | 1.1:-49698369 | None:intergenic |
| CCGGAATCCTCCCCACTCTA+AGG | 0.261658 | 1.1:-49693943 | None:intergenic |
| GTCCATATGTGTTGAAAATT+CGG | 0.271718 | 1.1:-49697227 | None:intergenic |
| CGTGTGTGCTTCATTGATTT+TGG | 0.283761 | 1.1:-49693731 | None:intergenic |
| AAGCAAAGGAACTGCTAAAC+TGG | 0.287296 | 1.1:+49698382 | MS.gene30862:CDS |
| AAAATTTGGTTCATTTGTTT+GGG | 0.300385 | 1.1:+49694101 | MS.gene30862:CDS |
| ATCCTCAGAAAGAGACTTAC+TGG | 0.308465 | 1.1:+49695117 | MS.gene30862:CDS |
| AGGCTGAGAGTGGTGGTTAC+TGG | 0.315967 | 1.1:+49693983 | MS.gene30862:CDS |
| GGGAGGATTCCGGCGGGAAT+TGG | 0.339431 | 1.1:+49693953 | MS.gene30862:CDS |
| TTTCCGATTCACAGGTTAAT+GGG | 0.345106 | 1.1:+49697957 | MS.gene30862:intron |
| TTTCCAATATGTCTCTGATT+TGG | 0.350994 | 1.1:+49697453 | MS.gene30862:CDS |
| AAACAACCATTGACTGTATA+CGG | 0.354678 | 1.1:+49697409 | MS.gene30862:CDS |
| GGATTGGTCCGGTTCAATTC+CGG | 0.358561 | 1.1:+49693905 | MS.gene30862:CDS |
| ACTGGTGGTGCGGGGTTTGT+TGG | 0.364922 | 1.1:+49694001 | MS.gene30862:CDS |
| AGGATTCCGGCGGGAATTGG+TGG | 0.368653 | 1.1:+49693956 | MS.gene30862:CDS |
| CCTTAGAGTGGGGAGGATTC+CGG | 0.372009 | 1.1:+49693943 | MS.gene30862:CDS |
| TAATGGGCTGGCAGCTTTGA+TGG | 0.374866 | 1.1:+49697973 | MS.gene30862:CDS |
| TAAGAGGTAGTTGATCGATC+TGG | 0.381265 | 1.1:-49693762 | None:intergenic |
| CTACCAAATCAGAGACATAT+TGG | 0.385168 | 1.1:-49697456 | None:intergenic |
| AAGGGATGCACCTTCGTTGC+CGG | 0.389982 | 1.1:-49693924 | None:intergenic |
| TGATCAACCTCAAGCAAAAT+CGG | 0.404285 | 1.1:-49694163 | None:intergenic |
| CATTTGGTTGATAAGTTGAT+TGG | 0.411126 | 1.1:+49694028 | MS.gene30862:CDS |
| GTGGTGGTTACTGGTGGTGC+GGG | 0.412049 | 1.1:+49693992 | MS.gene30862:CDS |
| TGAGGTATATGGTGATCCTT+TGG | 0.422529 | 1.1:+49695091 | MS.gene30862:CDS |
| TCCATATGTGTTGAAAATTC+GGG | 0.422719 | 1.1:-49697226 | None:intergenic |
| CTTCATTCAAAATCCGATTC+CGG | 0.427534 | 1.1:-49698455 | None:intergenic |
| GAAGACGTTGTTCTCGTAAG+AGG | 0.429983 | 1.1:-49693778 | None:intergenic |
| ATGGGTACACTTAATATGTT+GGG | 0.437761 | 1.1:+49695023 | MS.gene30862:CDS |
| CTTCGTTGCCGGAATTGAAC+CGG | 0.442351 | 1.1:-49693913 | None:intergenic |
| TGGGGCTAGCAAAGAGAATC+GGG | 0.443187 | 1.1:+49695042 | MS.gene30862:CDS |
| GGGGTTTGTTGGAAGTCATT+TGG | 0.444177 | 1.1:+49694012 | MS.gene30862:CDS |
| TCTAACATGGTGAATTCGCC+TGG | 0.444776 | 1.1:-49698031 | None:intergenic |
| GTTGATAAGTTGATTGGTAG+AGG | 0.452000 | 1.1:+49694034 | MS.gene30862:CDS |
| GAGAGGAGTTGTTATGATGA+AGG | 0.452967 | 1.1:+49695241 | MS.gene30862:CDS |
| ACTAGTACTAGTGAGGTATA+TGG | 0.456353 | 1.1:+49695080 | MS.gene30862:CDS |
| TGGTTAGTGATTTCCGGAAT+CGG | 0.461428 | 1.1:+49698442 | MS.gene30862:CDS |
| AAGAGGTAGTTGATCGATCT+GGG | 0.463238 | 1.1:-49693761 | None:intergenic |
| TACCTAGATCTGGATTGGTC+CGG | 0.466016 | 1.1:+49693894 | MS.gene30862:CDS |
| TTGGGGCTAGCAAAGAGAAT+CGG | 0.473363 | 1.1:+49695041 | MS.gene30862:CDS |
| TTCATTTGTTTGGGAACCCT+AGG | 0.477292 | 1.1:+49694110 | MS.gene30862:CDS |
| ATGGATTATCATCGAGGTGC+TGG | 0.482226 | 1.1:+49695289 | MS.gene30862:CDS |
| CGCATAAGTCCACCGGAGGC+CGG | 0.489930 | 1.1:+49693863 | MS.gene30862:CDS |
| CCATTGACTGTATACGGTGA+TGG | 0.498309 | 1.1:+49697415 | MS.gene30862:CDS |
| TGACGAATTAACTCAAACCT+AGG | 0.505279 | 1.1:-49694127 | None:intergenic |
| AACCGGACCAATCCAGATCT+AGG | 0.507512 | 1.1:-49693896 | None:intergenic |
| CGATTCACAGGTTAATGGGC+TGG | 0.508020 | 1.1:+49697961 | MS.gene30862:intron |
| CCCATCATCTAAACACATGC+GGG | 0.508792 | 1.1:-49697250 | None:intergenic |
| CCCGCATGTGTTTAGATGAT+GGG | 0.513142 | 1.1:+49697250 | MS.gene30862:CDS |
| CCATCACCGTATACAGTCAA+TGG | 0.514193 | 1.1:-49697415 | None:intergenic |
| CCCCGCATGTGTTTAGATGA+TGG | 0.517049 | 1.1:+49697249 | MS.gene30862:CDS |
| CACCATGTTAGAGCTTGCTC+AGG | 0.517775 | 1.1:+49698042 | MS.gene30862:CDS |
| TTATAATGAACAGGTGAGGC+AGG | 0.524789 | 1.1:-49694205 | None:intergenic |
| TGGACTTATGCGTGAAAGCG+TGG | 0.527221 | 1.1:-49693852 | None:intergenic |
| TTGAATGAAGACGAAGGGAA+AGG | 0.535562 | 1.1:+49698468 | MS.gene30862:CDS |
| TCTTTCTGAGGATGCTCCAA+AGG | 0.536160 | 1.1:-49695107 | None:intergenic |
| GCATGTTGGACCTTTCAACC+TGG | 0.542568 | 1.1:+49698003 | MS.gene30862:CDS |
| ATATCTGGTTTCCTCATGTG+TGG | 0.542809 | 1.1:-49698354 | None:intergenic |
| CCTGGGTTACCCAGGTTGAA+AGG | 0.544164 | 1.1:-49698013 | None:intergenic |
| CGGCGGGAATTGGTGGTCGG+AGG | 0.552402 | 1.1:+49693963 | MS.gene30862:CDS |
| AACTGCGGAAACACTTGCCA+TGG | 0.557107 | 1.1:+49695270 | MS.gene30862:CDS |
| CATTGACTGTATACGGTGAT+GGG | 0.558298 | 1.1:+49697416 | MS.gene30862:CDS |
| GATGGGTACACTTAATATGT+TGG | 0.563378 | 1.1:+49695022 | MS.gene30862:CDS |
| GAGGGAAGGTCTGCCTCTGA+TGG | 0.564662 | 1.1:+49698422 | MS.gene30862:CDS |
| CCCCAGTAAGTCTCTTTCTG+AGG | 0.565786 | 1.1:-49695119 | None:intergenic |
| TTGATAAGTTGATTGGTAGA+GGG | 0.566398 | 1.1:+49694035 | MS.gene30862:CDS |
| TCCTCAGAAAGAGACTTACT+GGG | 0.566496 | 1.1:+49695118 | MS.gene30862:CDS |
| TTCCGGCGGGAATTGGTGGT+CGG | 0.572919 | 1.1:+49693960 | MS.gene30862:CDS |
| CGGAATCCTCCCCACTCTAA+GGG | 0.574600 | 1.1:-49693942 | None:intergenic |
| AGTGGTGGTTACTGGTGGTG+CGG | 0.575709 | 1.1:+49693991 | MS.gene30862:CDS |
| AGCAAAGGAACTGCTAAACT+GGG | 0.578352 | 1.1:+49698383 | MS.gene30862:CDS |
| CGGTTCAATTCCGGCAACGA+AGG | 0.579114 | 1.1:+49693914 | MS.gene30862:CDS |
| TAGCAAAGAGAATCGGGGCG+AGG | 0.581519 | 1.1:+49695048 | MS.gene30862:CDS |
| TGGTGGTCGGAGGCTGAGAG+TGG | 0.582241 | 1.1:+49693973 | MS.gene30862:CDS |
| CGAAGGTGCATCCCTTAGAG+TGG | 0.583204 | 1.1:+49693931 | MS.gene30862:CDS |
| CATGTTGGACCTTTCAACCT+GGG | 0.583530 | 1.1:+49698004 | MS.gene30862:CDS |
| ACCAGATATTAGCAAAGCAA+AGG | 0.586183 | 1.1:+49698368 | MS.gene30862:CDS |
| GAAGGTGCATCCCTTAGAGT+GGG | 0.589233 | 1.1:+49693932 | MS.gene30862:CDS |
| GAGGCAGACCTTCCCTCAGT+GGG | 0.595211 | 1.1:-49698416 | None:intergenic |
| TCATCGAGGTGCTGGCGTTG+AGG | 0.598019 | 1.1:+49695297 | MS.gene30862:CDS |
| TGAATTCGCCTGGGTTACCC+AGG | 0.599406 | 1.1:-49698021 | None:intergenic |
| GGGCTGGCAGCTTTGATGGA+TGG | 0.602033 | 1.1:+49697977 | MS.gene30862:CDS |
| TAGAGTGGGGAGGATTCCGG+CGG | 0.603004 | 1.1:+49693946 | MS.gene30862:CDS |
| GATTTACAAGACAAATGTGA+TGG | 0.607290 | 1.1:+49695004 | MS.gene30862:intron |
| GACGAATTAACTCAAACCTA+GGG | 0.609053 | 1.1:-49694126 | None:intergenic |
| TGGTGGTTACTGGTGGTGCG+GGG | 0.612013 | 1.1:+49693993 | MS.gene30862:CDS |
| TACCTGAGCAAGCTCTAACA+TGG | 0.612614 | 1.1:-49698044 | None:intergenic |
| TTGATGGATGGTGAGCATGT+TGG | 0.612814 | 1.1:+49697989 | MS.gene30862:CDS |
| GGTAGTTGATCGATCTGGGG+AGG | 0.613305 | 1.1:-49693757 | None:intergenic |
| CGGAAATCACTAACCATCAG+AGG | 0.614097 | 1.1:-49698435 | None:intergenic |
| CTAACATGGTGAATTCGCCT+GGG | 0.615227 | 1.1:-49698030 | None:intergenic |
| CCTTTCAACCTGGGTAACCC+AGG | 0.616791 | 1.1:+49698013 | MS.gene30862:CDS |
| AGCACCTCGATGATAATCCA+TGG | 0.617547 | 1.1:-49695287 | None:intergenic |
| CTCCGACCACCAATTCCCGC+CGG | 0.617946 | 1.1:-49693962 | None:intergenic |
| CGTCTTCTCTTCATCCTCGT+CGG | 0.618862 | 1.1:+49693794 | MS.gene30862:CDS |
| GTAGTTGATCGATCTGGGGA+GGG | 0.619801 | 1.1:-49693756 | None:intergenic |
| GCCCATCATCTAAACACATG+CGG | 0.620747 | 1.1:-49697251 | None:intergenic |
| ATTTACAAGACAAATGTGAT+GGG | 0.627640 | 1.1:+49695005 | MS.gene30862:intron |
| CTGAGAGTGGTGGTTACTGG+TGG | 0.635999 | 1.1:+49693986 | MS.gene30862:CDS |
| TGGTCGGAGGCTGAGAGTGG+TGG | 0.638281 | 1.1:+49693976 | MS.gene30862:CDS |
| GCTTTCACGCATAAGTCCAC+CGG | 0.649507 | 1.1:+49693856 | MS.gene30862:CDS |
| AGAGGCAGACCTTCCCTCAG+TGG | 0.650404 | 1.1:-49698417 | None:intergenic |
| TTCACGCATAAGTCCACCGG+AGG | 0.657079 | 1.1:+49693859 | MS.gene30862:CDS |
| GGACTTATGCGTGAAAGCGT+GGG | 0.657693 | 1.1:-49693851 | None:intergenic |
| GTGCATCCCTTAGAGTGGGG+AGG | 0.660025 | 1.1:+49693936 | MS.gene30862:CDS |
| AGAGTGGGGAGGATTCCGGC+GGG | 0.664910 | 1.1:+49693947 | MS.gene30862:CDS |
| CTGCTGATGATCCACACATG+AGG | 0.675884 | 1.1:+49698343 | MS.gene30862:CDS |
| ATACTTATAATGAACAGGTG+AGG | 0.680000 | 1.1:-49694209 | None:intergenic |
| TGGGTACACTTAATATGTTG+GGG | 0.687687 | 1.1:+49695024 | MS.gene30862:CDS |
| AAGGTGCATCCCTTAGAGTG+GGG | 0.704743 | 1.1:+49693933 | MS.gene30862:CDS |
| AGAGGTAGTTGATCGATCTG+GGG | 0.705284 | 1.1:-49693760 | None:intergenic |
| CCTCAGAAAGAGACTTACTG+GGG | 0.708574 | 1.1:+49695119 | MS.gene30862:CDS |
| CTCAGAAAGAGACTTACTGG+GGG | 0.710262 | 1.1:+49695120 | MS.gene30862:CDS |
| CCATCATCTAAACACATGCG+GGG | 0.713472 | 1.1:-49697249 | None:intergenic |
| CTTGCCATGGATTATCATCG+AGG | 0.721056 | 1.1:+49695283 | MS.gene30862:CDS |
| TGATGAAGGAAAGCGAACTG+CGG | 0.722751 | 1.1:+49695255 | MS.gene30862:CDS |
| GGGGCTAGCAAAGAGAATCG+GGG | 0.724312 | 1.1:+49695043 | MS.gene30862:CDS |
| AACCGATCAAAATTCCGACG+AGG | 0.743307 | 1.1:-49693808 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTAAATTAAATTTACTAT+AGG | - | chr1.1:49696188-49696207 | None:intergenic | 10.0% |
| !!! | AAAAAAATATCTATTTTAGT+CGG | + | chr1.1:49695942-49695961 | MS.gene30862:intron | 10.0% |
| !!! | TGAATTTTAATTTTTTGAAT+TGG | + | chr1.1:49697842-49697861 | MS.gene30862:intron | 10.0% |
| !!! | TTATTGATAATTTTTTTACT+GGG | + | chr1.1:49694071-49694090 | MS.gene30862:CDS | 10.0% |
| !!! | TTTATAATTTTATATCATTG+CGG | + | chr1.1:49696561-49696580 | MS.gene30862:intron | 10.0% |
| !! | AAATTCAAAATAAATAGTAG+TGG | - | chr1.1:49697829-49697848 | None:intergenic | 15.0% |
| !! | ATTGTTTAAAAGAAATGAAT+TGG | + | chr1.1:49696619-49696638 | MS.gene30862:intron | 15.0% |
| !! | TATTCATTCTTTAATCAATA+TGG | + | chr1.1:49698147-49698166 | MS.gene30862:intron | 15.0% |
| !!! | AATAGATATTTTTTTTTTGG+TGG | - | chr1.1:49695937-49695956 | None:intergenic | 15.0% |
| !!! | AATTATTATGTTGGAATTTT+AGG | + | chr1.1:49695217-49695236 | MS.gene30862:intron | 15.0% |
| !!! | AGTCTAAAATTAATTTATGT+TGG | - | chr1.1:49697137-49697156 | None:intergenic | 15.0% |
| !!! | GTTATTGATAATTTTTTTAC+TGG | + | chr1.1:49694070-49694089 | MS.gene30862:CDS | 15.0% |
| !!! | TTATTTTTTGTTATAGAAAC+AGG | + | chr1.1:49695625-49695644 | MS.gene30862:intron | 15.0% |
| !!! | TTTTTAAGTCATATTAGAAT+TGG | - | chr1.1:49695420-49695439 | None:intergenic | 15.0% |
| !! | AAACAAGAAAGAATGAAAAA+AGG | - | chr1.1:49694257-49694276 | None:intergenic | 20.0% |
| !! | AATCTATCATAAACCATATT+TGG | - | chr1.1:49696446-49696465 | None:intergenic | 20.0% |
| !! | GTACTTCGTTAATAATATAT+CGG | - | chr1.1:49696166-49696185 | None:intergenic | 20.0% |
| !! | TAAAGTAACACAAAGAAAAA+GGG | - | chr1.1:49697317-49697336 | None:intergenic | 20.0% |
| !! | TGGTTTATGATAGATTATTA+TGG | + | chr1.1:49696450-49696469 | MS.gene30862:intron | 20.0% |
| !! | TTAAAGTAACACAAAGAAAA+AGG | - | chr1.1:49697318-49697337 | None:intergenic | 20.0% |
| !! | TTAAGCTGTTTATATAAACA+AGG | + | chr1.1:49695682-49695701 | MS.gene30862:intron | 20.0% |
| !! | TTGATTTACAAATGAGAATT+TGG | + | chr1.1:49696669-49696688 | MS.gene30862:intron | 20.0% |
| !! | TTTGGTATTAACTTATTAAC+AGG | + | chr1.1:49696687-49696706 | MS.gene30862:intron | 20.0% |
| !!! | AAAATTTGGTTCATTTGTTT+GGG | + | chr1.1:49694101-49694120 | MS.gene30862:CDS | 20.0% |
| !!! | AAATTTTGTGATTGGAATTT+TGG | + | chr1.1:49694548-49694567 | MS.gene30862:intron | 20.0% |
| !!! | AATTGATAGTACAAATTGAA+AGG | - | chr1.1:49697528-49697547 | None:intergenic | 20.0% |
| !!! | CAATAATTCTTCATTTTTCA+TGG | - | chr1.1:49696603-49696622 | None:intergenic | 20.0% |
| !!! | TATTGACTTTATTATGTGAT+TGG | + | chr1.1:49694573-49694592 | MS.gene30862:intron | 20.0% |
| !!! | TTTTTTAAGAAATCATGTTG+TGG | + | chr1.1:49696075-49696094 | MS.gene30862:intron | 20.0% |
| ! | AAACTATAGGAGAAACTATT+AGG | + | chr1.1:49696393-49696412 | MS.gene30862:intron | 25.0% |
| ! | AACATTAGAAACACTTCTAA+TGG | - | chr1.1:49694833-49694852 | None:intergenic | 25.0% |
| ! | AACTATTAGGAAAGATTTAG+AGG | + | chr1.1:49696406-49696425 | MS.gene30862:intron | 25.0% |
| ! | ATTGGTTATATAGTTCACTT+TGG | - | chr1.1:49696843-49696862 | None:intergenic | 25.0% |
| ! | ATTTACAAGACAAATGTGAT+GGG | + | chr1.1:49695005-49695024 | MS.gene30862:intron | 25.0% |
| ! | CAAATAATTCAAATCCAAAC+AGG | - | chr1.1:49695502-49695521 | None:intergenic | 25.0% |
| ! | CAGCATTTGTAATTATACAT+TGG | + | chr1.1:49697920-49697939 | MS.gene30862:intron | 25.0% |
| ! | GAACTATATAACCAATGAAT+AGG | + | chr1.1:49696847-49696866 | MS.gene30862:intron | 25.0% |
| ! | GTGTAACTTTATTATGTGAT+TGG | + | chr1.1:49694613-49694632 | MS.gene30862:intron | 25.0% |
| ! | GTTCTATCATAAACCAAATT+TGG | - | chr1.1:49696276-49696295 | None:intergenic | 25.0% |
| ! | TACATGCTTCTATTTGAATT+TGG | + | chr1.1:49694290-49694309 | MS.gene30862:intron | 25.0% |
| ! | TAGTTAACAAATATTGAGCA+AGG | - | chr1.1:49695472-49695491 | None:intergenic | 25.0% |
| ! | TATCAATGTACAAAAGTTTG+TGG | + | chr1.1:49697610-49697629 | MS.gene30862:intron | 25.0% |
| ! | TGAAACTACAAAACAAGAAT+AGG | - | chr1.1:49698070-49698089 | None:intergenic | 25.0% |
| ! | TTGGTTATATAGTTCACTTT+GGG | - | chr1.1:49696842-49696861 | None:intergenic | 25.0% |
| ! | TTGTAAATCAAATATCAGCA+AGG | - | chr1.1:49696660-49696679 | None:intergenic | 25.0% |
| !! | ATTTTATGAACTTCTTGTGA+TGG | + | chr1.1:49698246-49698265 | MS.gene30862:intron | 25.0% |
| !! | GAAAATTTGGTTCATTTGTT+TGG | + | chr1.1:49694100-49694119 | MS.gene30862:CDS | 25.0% |
| !! | GAATTTTGTGATTGGATTTT+GGG | + | chr1.1:49694955-49694974 | MS.gene30862:intron | 25.0% |
| !! | GGAAATTTGAATTTTGTGAT+TGG | + | chr1.1:49694947-49694966 | MS.gene30862:intron | 25.0% |
| !! | GGAATTTCAAATTTTGTGAT+TGG | + | chr1.1:49694540-49694559 | MS.gene30862:intron | 25.0% |
| !! | TGAATTTTGTGATTGGATTT+TGG | + | chr1.1:49694954-49694973 | MS.gene30862:intron | 25.0% |
| !!! | AAATTTATTTTCCGATTCAC+AGG | + | chr1.1:49697949-49697968 | MS.gene30862:intron | 25.0% |
| !!! | AGATATTTTTTTTTTGGTGG+TGG | - | chr1.1:49695934-49695953 | None:intergenic | 25.0% |
| !!! | GTGTTACTTTAAATTACTGT+GGG | + | chr1.1:49697326-49697345 | MS.gene30862:intron | 25.0% |
| !!! | TGAGAAATTACGTGTTTTTA+TGG | + | chr1.1:49695188-49695207 | MS.gene30862:intron | 25.0% |
| !!! | TGTGTTACTTTAAATTACTG+TGG | + | chr1.1:49697325-49697344 | MS.gene30862:intron | 25.0% |
| !!! | TTGATAATTTTTTTACTGGG+AGG | + | chr1.1:49694074-49694093 | MS.gene30862:CDS | 25.0% |
| !!! | TTGTTTTTGTAGTTGTTCAA+TGG | + | chr1.1:49694511-49694530 | MS.gene30862:intron | 25.0% |
| !!! | TTTTAGAGAAACCATTAGAA+AGG | + | chr1.1:49696227-49696246 | MS.gene30862:intron | 25.0% |
| AACACAAAGAAAAAGGGAAA+GGG | - | chr1.1:49697311-49697330 | None:intergenic | 30.0% | |
| AACCATTAGAAAGGATTTAG+AGG | + | chr1.1:49696236-49696255 | MS.gene30862:intron | 30.0% | |
| AACTCCTAATATCTTTCAGA+TGG | + | chr1.1:49697679-49697698 | MS.gene30862:intron | 30.0% | |
| AAGGAGATTGAAAATGAAGT+AGG | - | chr1.1:49696810-49696829 | None:intergenic | 30.0% | |
| AAGGATATGATTGTCTTGAT+AGG | - | chr1.1:49694238-49694257 | None:intergenic | 30.0% | |
| ACACAATATTAAGTGCTAAC+TGG | + | chr1.1:49696005-49696024 | MS.gene30862:intron | 30.0% | |
| ACTTCGTTAATGTTTCAAAG+AGG | - | chr1.1:49697755-49697774 | None:intergenic | 30.0% | |
| AGATTATATAGGGAGAAGAT+TGG | + | chr1.1:49696041-49696060 | MS.gene30862:intron | 30.0% | |
| AGATTTAGAGGTTAATGAGT+TGG | + | chr1.1:49696418-49696437 | MS.gene30862:intron | 30.0% | |
| AGGATATGATTGTCTTGATA+GGG | - | chr1.1:49694237-49694256 | None:intergenic | 30.0% | |
| ATACTTATAATGAACAGGTG+AGG | - | chr1.1:49694212-49694231 | None:intergenic | 30.0% | |
| ATATAACCAATGAATAGGTC+AGG | + | chr1.1:49696852-49696871 | MS.gene30862:intron | 30.0% | |
| ATGCATTGAACTTCAAAAAC+AGG | - | chr1.1:49696924-49696943 | None:intergenic | 30.0% | |
| ATGGGTACACTTAATATGTT+GGG | + | chr1.1:49695023-49695042 | MS.gene30862:CDS | 30.0% | |
| ATGTACAAAAGTTTGTGGTT+TGG | + | chr1.1:49697615-49697634 | MS.gene30862:intron | 30.0% | |
| CAACCATTAAACAACAACAA+CGG | - | chr1.1:49694924-49694943 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr1.1:49695889-49695908 | MS.gene30862:intron | 30.0% | |
| GATTTACAAGACAAATGTGA+TGG | + | chr1.1:49695004-49695023 | MS.gene30862:intron | 30.0% | |
| GGGTTATACTTATAATGAAC+AGG | - | chr1.1:49694217-49694236 | None:intergenic | 30.0% | |
| GTAATCAAATGTGTCAATGT+TGG | + | chr1.1:49694881-49694900 | MS.gene30862:intron | 30.0% | |
| GTCCATATGTGTTGAAAATT+CGG | - | chr1.1:49697230-49697249 | None:intergenic | 30.0% | |
| TAACACAAAGAAAAAGGGAA+AGG | - | chr1.1:49697312-49697331 | None:intergenic | 30.0% | |
| TCCATATGTGTTGAAAATTC+GGG | - | chr1.1:49697229-49697248 | None:intergenic | 30.0% | |
| TGCATTGAACTTCAAAAACA+GGG | - | chr1.1:49696923-49696942 | None:intergenic | 30.0% | |
| TGGTGGCTTAATTATTATGT+TGG | + | chr1.1:49695208-49695227 | MS.gene30862:intron | 30.0% | |
| TGTTCACCTAGAAAAACTAT+AGG | + | chr1.1:49696380-49696399 | MS.gene30862:intron | 30.0% | |
| TTAGAAACACTTCTAATGGA+AGG | - | chr1.1:49694829-49694848 | None:intergenic | 30.0% | |
| TTATAAACTCACTCACCAAT+TGG | - | chr1.1:49695155-49695174 | None:intergenic | 30.0% | |
| TTTCCAATATGTCTCTGATT+TGG | + | chr1.1:49697453-49697472 | MS.gene30862:CDS | 30.0% | |
| ! | AAACAACCATTGACTGTATA+CGG | + | chr1.1:49697409-49697428 | MS.gene30862:CDS | 30.0% |
| ! | ATAGTTTTTCTAGGTGAACA+AGG | - | chr1.1:49696380-49696399 | None:intergenic | 30.0% |
| ! | CAATATTTGTTAACTACCTG+TGG | + | chr1.1:49695476-49695495 | MS.gene30862:intron | 30.0% |
| ! | GTTTCTCCTATAGTTTTTCT+AGG | - | chr1.1:49696389-49696408 | None:intergenic | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | + | chr1.1:49696430-49696449 | MS.gene30862:intron | 30.0% |
| ! | TGTTAGTAATTTTGTTGCAC+AGG | + | chr1.1:49697278-49697297 | MS.gene30862:CDS | 30.0% |
| !! | CATTTGGTTGATAAGTTGAT+TGG | + | chr1.1:49694028-49694047 | MS.gene30862:CDS | 30.0% |
| !! | CTTAGCTTGTTCATTCTAAA+AGG | + | chr1.1:49695738-49695757 | MS.gene30862:intron | 30.0% |
| !! | GAAATTACGTGTTTTTATGG+TGG | + | chr1.1:49695191-49695210 | MS.gene30862:intron | 30.0% |
| !! | GTACATTGATAAGCTTTAGA+TGG | - | chr1.1:49697601-49697620 | None:intergenic | 30.0% |
| !! | TCACGTTATTTGTACTGATT+TGG | + | chr1.1:49697178-49697197 | MS.gene30862:intron | 30.0% |
| !! | TCATTTTTCATGGAAAGTTG+AGG | - | chr1.1:49696593-49696612 | None:intergenic | 30.0% |
| !! | TCTTTTAACTAGTACTAGTG+AGG | + | chr1.1:49695073-49695092 | MS.gene30862:CDS | 30.0% |
| !! | TTGATAAGTTGATTGGTAGA+GGG | + | chr1.1:49694035-49694054 | MS.gene30862:CDS | 30.0% |
| !!! | CTTTTAGAATGAACAAGCTA+AGG | - | chr1.1:49695740-49695759 | None:intergenic | 30.0% |
| !!! | TGTTTTTGAAGTTCAATGCA+TGG | + | chr1.1:49696923-49696942 | MS.gene30862:intron | 30.0% |
| !!! | TTCATTGATTTTGGTGAGTA+TGG | - | chr1.1:49693725-49693744 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGATTCCACAACA+TGG | - | chr1.1:49696139-49696158 | None:intergenic | 30.0% |
| AACATTTAGCATGATCTGAC+AGG | - | chr1.1:49698120-49698139 | None:intergenic | 35.0% | |
| AAGGTCGCAGAGATTATATA+GGG | + | chr1.1:49696031-49696050 | MS.gene30862:intron | 35.0% | |
| ACCAGATATTAGCAAAGCAA+AGG | + | chr1.1:49698368-49698387 | MS.gene30862:CDS | 35.0% | |
| ACTAGTACTAGTGAGGTATA+TGG | + | chr1.1:49695080-49695099 | MS.gene30862:CDS | 35.0% | |
| ACTTTAAATTACTGTGGGAG+AGG | + | chr1.1:49697331-49697350 | MS.gene30862:intron | 35.0% | |
| AGATCTAGGTAAAAACGAAC+CGG | - | chr1.1:49693885-49693904 | None:intergenic | 35.0% | |
| AGCTCGGAAACTACATTATA+CGG | - | chr1.1:49695774-49695793 | None:intergenic | 35.0% | |
| AGTGTTTAATTGATCTGAGC+TGG | + | chr1.1:49695337-49695356 | MS.gene30862:intron | 35.0% | |
| ATCTAAACCAGTGTTGTCTA+TGG | + | chr1.1:49696974-49696993 | MS.gene30862:intron | 35.0% | |
| ATGTAAACCGACACATTTGA+TGG | - | chr1.1:49694723-49694742 | None:intergenic | 35.0% | |
| ATTATGGCGTAATTTGATCC+AGG | + | chr1.1:49696466-49696485 | MS.gene30862:intron | 35.0% | |
| ATTCCACAACATGGTTTCTT+AGG | - | chr1.1:49696130-49696149 | None:intergenic | 35.0% | |
| CAGACGATGATTAGCAAAAT+AGG | - | chr1.1:49697566-49697585 | None:intergenic | 35.0% | |
| CCAGTTGACATTAAAAATCG+AGG | - | chr1.1:49695708-49695727 | None:intergenic | 35.0% | |
| CTACCAAATCAGAGACATAT+TGG | - | chr1.1:49697459-49697478 | None:intergenic | 35.0% | |
| CTTCATTCAAAATCCGATTC+CGG | - | chr1.1:49698458-49698477 | None:intergenic | 35.0% | |
| GACCTCTAAATCCTTTCTAA+TGG | - | chr1.1:49696241-49696260 | None:intergenic | 35.0% | |
| GACGAATTAACTCAAACCTA+GGG | - | chr1.1:49694129-49694148 | None:intergenic | 35.0% | |
| GATGGGTACACTTAATATGT+TGG | + | chr1.1:49695022-49695041 | MS.gene30862:CDS | 35.0% | |
| GCATTGAACTTCAAAAACAG+GGG | - | chr1.1:49696922-49696941 | None:intergenic | 35.0% | |
| GTAGTTGTTCAATGGTTGTT+TGG | + | chr1.1:49694519-49694538 | MS.gene30862:intron | 35.0% | |
| TACAGTAAGGGATTAAGCAA+TGG | + | chr1.1:49698201-49698220 | MS.gene30862:intron | 35.0% | |
| TACTGGGAGGAAAGAAAATT+TGG | + | chr1.1:49694087-49694106 | MS.gene30862:CDS | 35.0% | |
| TCCTTTGCTTTGCTAATATC+TGG | - | chr1.1:49698372-49698391 | None:intergenic | 35.0% | |
| TGACGAATTAACTCAAACCT+AGG | - | chr1.1:49694130-49694149 | None:intergenic | 35.0% | |
| TGATCAACCTCAAGCAAAAT+CGG | - | chr1.1:49694166-49694185 | None:intergenic | 35.0% | |
| TGGGTACACTTAATATGTTG+GGG | + | chr1.1:49695024-49695043 | MS.gene30862:CDS | 35.0% | |
| TGTTGTGGAATCACAAAAGA+TGG | + | chr1.1:49696090-49696109 | MS.gene30862:intron | 35.0% | |
| TTCAATCCTGACCTATTCAT+TGG | - | chr1.1:49696861-49696880 | None:intergenic | 35.0% | |
| TTTCCGATTCACAGGTTAAT+GGG | + | chr1.1:49697957-49697976 | MS.gene30862:intron | 35.0% | |
| TTTCCTAAGAAACCATGTTG+TGG | + | chr1.1:49696124-49696143 | MS.gene30862:intron | 35.0% | |
| ! | AATGTGTCAATGTTGGTGTT+AGG | + | chr1.1:49694888-49694907 | MS.gene30862:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATT+TGG | + | chr1.1:49696260-49696279 | MS.gene30862:intron | 35.0% |
| ! | CCTCGATTTTTAATGTCAAC+TGG | + | chr1.1:49695705-49695724 | MS.gene30862:intron | 35.0% |
| ! | GGATTTTGAATGAAGACGAA+GGG | + | chr1.1:49698463-49698482 | MS.gene30862:CDS | 35.0% |
| ! | GTTTTTACCTAGATCTGGAT+TGG | + | chr1.1:49693889-49693908 | MS.gene30862:CDS | 35.0% |
| ! | TAATTGATCTGAGCTGGTTT+AGG | + | chr1.1:49695343-49695362 | MS.gene30862:intron | 35.0% |
| ! | TATCAACTTGGTCTTTCGTT+GGG | + | chr1.1:49695794-49695813 | MS.gene30862:intron | 35.0% |
| ! | TCATCTTTTCAAAAACACGC+AGG | + | chr1.1:49698269-49698288 | MS.gene30862:intron | 35.0% |
| ! | TTATCAACTTGGTCTTTCGT+TGG | + | chr1.1:49695793-49695812 | MS.gene30862:intron | 35.0% |
| ! | TTTTCCGATTCACAGGTTAA+TGG | + | chr1.1:49697956-49697975 | MS.gene30862:intron | 35.0% |
| !! | AAAGACCAAGTTGATAAGCT+CGG | - | chr1.1:49695790-49695809 | None:intergenic | 35.0% |
| !! | ATGTGTCAATGTTGGTGTTA+GGG | + | chr1.1:49694889-49694908 | MS.gene30862:intron | 35.0% |
| !! | ATGTTGGAATTTTAGGTGAG+AGG | + | chr1.1:49695224-49695243 | MS.gene30862:intron | 35.0% |
| !! | ATTGATTTTGGTGAGTATGG+TGG | - | chr1.1:49693722-49693741 | None:intergenic | 35.0% |
| !! | CAATATGTCTCTGATTTGGT+AGG | + | chr1.1:49697457-49697476 | MS.gene30862:intron | 35.0% |
| !! | GTTGATAAGTTGATTGGTAG+AGG | + | chr1.1:49694034-49694053 | MS.gene30862:CDS | 35.0% |
| !! | GTTGTTGTTTAATGGTTGCT+TGG | + | chr1.1:49694926-49694945 | MS.gene30862:intron | 35.0% |
| !! | TTTGTACTGATTTGGTTTGC+TGG | + | chr1.1:49697186-49697205 | MS.gene30862:intron | 35.0% |
| !!! | GATTTGGTTTGCTGGTTTTT+AGG | + | chr1.1:49697194-49697213 | MS.gene30862:intron | 35.0% |
| AAACCGACACATTTGATGGA+AGG | - | chr1.1:49694719-49694738 | None:intergenic | 40.0% | |
| AAGAGGTAGTTGATCGATCT+GGG | - | chr1.1:49693764-49693783 | None:intergenic | 40.0% | |
| AAGCAAAGGAACTGCTAAAC+TGG | + | chr1.1:49698382-49698401 | MS.gene30862:CDS | 40.0% | |
| AGATCAGTGTCGTCAGATAT+TGG | - | chr1.1:49697111-49697130 | None:intergenic | 40.0% | |
| AGCAAAGGAACTGCTAAACT+GGG | + | chr1.1:49698383-49698402 | MS.gene30862:CDS | 40.0% | |
| AGTTTCCGAGCTTATCAACT+TGG | + | chr1.1:49695782-49695801 | MS.gene30862:intron | 40.0% | |
| ATCCTCAGAAAGAGACTTAC+TGG | + | chr1.1:49695117-49695136 | MS.gene30862:CDS | 40.0% | |
| ATGCCTTCCATCAAATGTGT+CGG | + | chr1.1:49694713-49694732 | MS.gene30862:intron | 40.0% | |
| ATGTGTGATCTCTACTTCCA+GGG | + | chr1.1:49697886-49697905 | MS.gene30862:intron | 40.0% | |
| ATTAAGTGCTAACTGGCTGA+AGG | + | chr1.1:49696012-49696031 | MS.gene30862:intron | 40.0% | |
| CAAATGTCCTAACACCAACA+CGG | - | chr1.1:49694494-49694513 | None:intergenic | 40.0% | |
| CTAATCATCGTCTGAACTTG+GGG | + | chr1.1:49697572-49697591 | MS.gene30862:intron | 40.0% | |
| CTCAATGTCTTCTCTTGTGT+CGG | + | chr1.1:49695374-49695393 | MS.gene30862:intron | 40.0% | |
| CTCTGATGGTTAGTGATTTC+CGG | + | chr1.1:49698436-49698455 | MS.gene30862:CDS | 40.0% | |
| GAAGGTCGCAGAGATTATAT+AGG | + | chr1.1:49696030-49696049 | MS.gene30862:intron | 40.0% | |
| GAGAGGAGTTGTTATGATGA+AGG | + | chr1.1:49695241-49695260 | MS.gene30862:CDS | 40.0% | |
| GCTAATCATCGTCTGAACTT+GGG | + | chr1.1:49697571-49697590 | MS.gene30862:intron | 40.0% | |
| GCTCGGAAACTACATTATAC+GGG | - | chr1.1:49695773-49695792 | None:intergenic | 40.0% | |
| GCTTAATCCCTTACTGTAGA+AGG | - | chr1.1:49698199-49698218 | None:intergenic | 40.0% | |
| GGATTTAGAGGTCAATGAGT+TGG | + | chr1.1:49696248-49696267 | MS.gene30862:intron | 40.0% | |
| TAAGAGGTAGTTGATCGATC+TGG | - | chr1.1:49693765-49693784 | None:intergenic | 40.0% | |
| TAGTGTCAGTGTCAAACACT+AGG | + | chr1.1:49694689-49694708 | MS.gene30862:intron | 40.0% | |
| TATCCTGAGTCATGTGATGT+TGG | + | chr1.1:49696719-49696738 | MS.gene30862:intron | 40.0% | |
| TCCTCAGAAAGAGACTTACT+GGG | + | chr1.1:49695118-49695137 | MS.gene30862:CDS | 40.0% | |
| TGAACTTCAAAAACAGGGGT+CGG | - | chr1.1:49696918-49696937 | None:intergenic | 40.0% | |
| TGACACAGACACTTACATGT+CGG | - | chr1.1:49694793-49694812 | None:intergenic | 40.0% | |
| TGAGGTATATGGTGATCCTT+TGG | + | chr1.1:49695091-49695110 | MS.gene30862:CDS | 40.0% | |
| TGCATAATATATGCAAGGCC+CGG | + | chr1.1:49695894-49695913 | MS.gene30862:intron | 40.0% | |
| TGCTAATCATCGTCTGAACT+TGG | + | chr1.1:49697570-49697589 | MS.gene30862:intron | 40.0% | |
| TGGGGGAATGTTAATCCAAT+TGG | + | chr1.1:49695137-49695156 | MS.gene30862:CDS | 40.0% | |
| TGGTTAGTGATTTCCGGAAT+CGG | + | chr1.1:49698442-49698461 | MS.gene30862:CDS | 40.0% | |
| TGTTGTGCCTTCTACAGTAA+GGG | + | chr1.1:49698189-49698208 | MS.gene30862:intron | 40.0% | |
| TTATAATGAACAGGTGAGGC+AGG | - | chr1.1:49694208-49694227 | None:intergenic | 40.0% | |
| TTCATTTGTTTGGGAACCCT+AGG | + | chr1.1:49694110-49694129 | MS.gene30862:CDS | 40.0% | |
| TTGAATGAAGACGAAGGGAA+AGG | + | chr1.1:49698468-49698487 | MS.gene30862:CDS | 40.0% | |
| TTGTTGTGCCTTCTACAGTA+AGG | + | chr1.1:49698188-49698207 | MS.gene30862:intron | 40.0% | |
| ! | ATATCTGGTTTCCTCATGTG+TGG | - | chr1.1:49698357-49698376 | None:intergenic | 40.0% |
| ! | ATCAACTTGGTCTTTCGTTG+GGG | + | chr1.1:49695795-49695814 | MS.gene30862:intron | 40.0% |
| ! | CATTGACTGTATACGGTGAT+GGG | + | chr1.1:49697416-49697435 | MS.gene30862:CDS | 40.0% |
| ! | CGGATTTTGAATGAAGACGA+AGG | + | chr1.1:49698462-49698481 | MS.gene30862:CDS | 40.0% |
| ! | GCCCGAATTTTCAACACATA+TGG | + | chr1.1:49697225-49697244 | MS.gene30862:CDS | 40.0% |
| ! | GTTTACACTCGCTGACTAAA+TGG | - | chr1.1:49695980-49695999 | None:intergenic | 40.0% |
| ! | TCACTTTGGGAAAGTTGTCA+AGG | - | chr1.1:49696829-49696848 | None:intergenic | 40.0% |
| ! | TGTTGATCCGATTTTGCTTG+AGG | + | chr1.1:49694156-49694175 | MS.gene30862:CDS | 40.0% |
| !! | AAGCCTTATTCCACTAAGTG+GGG | - | chr1.1:49696329-49696348 | None:intergenic | 40.0% |
| !! | ATCCTCGTCGGAATTTTGAT+CGG | + | chr1.1:49693806-49693825 | MS.gene30862:CDS | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+GGG | - | chr1.1:49696330-49696349 | None:intergenic | 40.0% |
| !! | GGTTCGTTTTTACCTAGATC+TGG | + | chr1.1:49693884-49693903 | MS.gene30862:CDS | 40.0% |
| !! | TCGCCGTTGTTGTTGTTTAA+TGG | + | chr1.1:49694918-49694937 | MS.gene30862:intron | 40.0% |
| !!! | AGATATCAGTGGTGGGTTTT+TGG | - | chr1.1:49697081-49697100 | None:intergenic | 40.0% |
| !!! | CGTGTGTGCTTCATTGATTT+TGG | - | chr1.1:49693734-49693753 | None:intergenic | 40.0% |
| AACCGATCAAAATTCCGACG+AGG | - | chr1.1:49693811-49693830 | None:intergenic | 45.0% | |
| ACATCTGCCATAGACAACAC+TGG | - | chr1.1:49696984-49697003 | None:intergenic | 45.0% | |
| AGAGGTAGTTGATCGATCTG+GGG | - | chr1.1:49693763-49693782 | None:intergenic | 45.0% | |
| AGCACCTCGATGATAATCCA+TGG | - | chr1.1:49695290-49695309 | None:intergenic | 45.0% | |
| CAGCCCATTAACCTGTGAAT+CGG | - | chr1.1:49697963-49697982 | None:intergenic | 45.0% | |
| CATAATATATGCAAGGCCCG+GGG | + | chr1.1:49695896-49695915 | MS.gene30862:intron | 45.0% | |
| CATGTTGGACCTTTCAACCT+GGG | + | chr1.1:49698004-49698023 | MS.gene30862:CDS | 45.0% | |
| CCACTTAGTGGAATAAGGCT+TGG | + | chr1.1:49696328-49696347 | MS.gene30862:intron | 45.0% | |
| CCATCACCGTATACAGTCAA+TGG | - | chr1.1:49697418-49697437 | None:intergenic | 45.0% | |
| CCATCATCTAAACACATGCG+GGG | - | chr1.1:49697252-49697271 | None:intergenic | 45.0% | |
| CCCATCATCTAAACACATGC+GGG | - | chr1.1:49697253-49697272 | None:intergenic | 45.0% | |
| CCCGCATGTGTTTAGATGAT+GGG | + | chr1.1:49697250-49697269 | MS.gene30862:CDS | 45.0% | |
| CCTCAGAAAGAGACTTACTG+GGG | + | chr1.1:49695119-49695138 | MS.gene30862:CDS | 45.0% | |
| CGGAAATCACTAACCATCAG+AGG | - | chr1.1:49698438-49698457 | None:intergenic | 45.0% | |
| CTAACATGGTGAATTCGCCT+GGG | - | chr1.1:49698033-49698052 | None:intergenic | 45.0% | |
| CTCAGAAAGAGACTTACTGG+GGG | + | chr1.1:49695120-49695139 | MS.gene30862:CDS | 45.0% | |
| CTTATTCCACTAAGTGGGGT+CGG | - | chr1.1:49696325-49696344 | None:intergenic | 45.0% | |
| CTTCTAATGGAAGGCTTGTC+TGG | - | chr1.1:49694820-49694839 | None:intergenic | 45.0% | |
| GAACTTCAAAAACAGGGGTC+GGG | - | chr1.1:49696917-49696936 | None:intergenic | 45.0% | |
| GAAGACGTTGTTCTCGTAAG+AGG | - | chr1.1:49693781-49693800 | None:intergenic | 45.0% | |
| GATGTGTGATCTCTACTTCC+AGG | + | chr1.1:49697885-49697904 | MS.gene30862:intron | 45.0% | |
| GCATAATATATGCAAGGCCC+GGG | + | chr1.1:49695895-49695914 | MS.gene30862:intron | 45.0% | |
| GCCCATCATCTAAACACATG+CGG | - | chr1.1:49697254-49697273 | None:intergenic | 45.0% | |
| GGAACCAAAAATCCCACTGA+GGG | + | chr1.1:49698404-49698423 | MS.gene30862:CDS | 45.0% | |
| GGTTTACATGTCGACACTAG+TGG | + | chr1.1:49694734-49694753 | MS.gene30862:intron | 45.0% | |
| GTAATCGTATGTGTCCGTGT+TGG | + | chr1.1:49694477-49694496 | MS.gene30862:intron | 45.0% | |
| GTGTTGTCTATGGCAGATGT+CGG | + | chr1.1:49696984-49697003 | MS.gene30862:intron | 45.0% | |
| TAGCCAACATCACATGACTC+AGG | - | chr1.1:49696725-49696744 | None:intergenic | 45.0% | |
| TCTAACATGGTGAATTCGCC+TGG | - | chr1.1:49698034-49698053 | None:intergenic | 45.0% | |
| TGATGAAGGAAAGCGAACTG+CGG | + | chr1.1:49695255-49695274 | MS.gene30862:CDS | 45.0% | |
| TTAACTACCTGTGGCCTGTT+TGG | + | chr1.1:49695485-49695504 | MS.gene30862:intron | 45.0% | |
| TTCAAATCCAAACAGGCCAC+AGG | - | chr1.1:49695495-49695514 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr1.1:49696499-49696518 | None:intergenic | 45.0% |
| ! | ATGGATTATCATCGAGGTGC+TGG | + | chr1.1:49695289-49695308 | MS.gene30862:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr1.1:49696500-49696519 | None:intergenic | 45.0% |
| ! | CCATTGACTGTATACGGTGA+TGG | + | chr1.1:49697415-49697434 | MS.gene30862:CDS | 45.0% |
| ! | CTTGCCATGGATTATCATCG+AGG | + | chr1.1:49695283-49695302 | MS.gene30862:CDS | 45.0% |
| ! | TACCTGAGCAAGCTCTAACA+TGG | - | chr1.1:49698047-49698066 | None:intergenic | 45.0% |
| ! | TATGTGTCCGTGTTGGTGTT+AGG | + | chr1.1:49694484-49694503 | MS.gene30862:intron | 45.0% |
| ! | TCTTTCTGAGGATGCTCCAA+AGG | - | chr1.1:49695110-49695129 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr1.1:49695867-49695886 | MS.gene30862:intron | 45.0% |
| ! | TTGATGGATGGTGAGCATGT+TGG | + | chr1.1:49697989-49698008 | MS.gene30862:CDS | 45.0% |
| ! | TTGGGGCTAGCAAAGAGAAT+CGG | + | chr1.1:49695041-49695060 | MS.gene30862:CDS | 45.0% |
| !! | CCAAGCCTTATTCCACTAAG+TGG | - | chr1.1:49696331-49696350 | None:intergenic | 45.0% |
| !! | GGGGTTTGTTGGAAGTCATT+TGG | + | chr1.1:49694012-49694031 | MS.gene30862:CDS | 45.0% |
| !! | TACCTAGATCTGGATTGGTC+CGG | + | chr1.1:49693894-49693913 | MS.gene30862:CDS | 45.0% |
| !!! | GGGTTTTTGGCTTTTCACCA+CGG | - | chr1.1:49697068-49697087 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTGGTGGTGGCCG+AGG | - | chr1.1:49695928-49695947 | None:intergenic | 45.0% |
| !!! | TAAAATAGATATTTTTTTTT+TGG | - | chr1.1:49695940-49695959 | None:intergenic | 5.0% |
| AACCGGACCAATCCAGATCT+AGG | - | chr1.1:49693899-49693918 | None:intergenic | 50.0% | |
| AACTGCGGAAACACTTGCCA+TGG | + | chr1.1:49695270-49695289 | MS.gene30862:CDS | 50.0% | |
| AAGGTGCATCCCTTAGAGTG+GGG | + | chr1.1:49693933-49693952 | MS.gene30862:CDS | 50.0% | |
| ATGCTGCAAGAGTTCTTCCC+TGG | - | chr1.1:49697906-49697925 | None:intergenic | 50.0% | |
| ATGTCGGAGAGCCAAAATCC+TGG | + | chr1.1:49697000-49697019 | MS.gene30862:intron | 50.0% | |
| CCAAAAATCCCACTGAGGGA+AGG | + | chr1.1:49698408-49698427 | MS.gene30862:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr1.1:49696498-49696517 | MS.gene30862:intron | 50.0% | |
| CCATGGCAGATATCAGTGGT+GGG | - | chr1.1:49697088-49697107 | None:intergenic | 50.0% | |
| CCCCAGTAAGTCTCTTTCTG+AGG | - | chr1.1:49695122-49695141 | None:intergenic | 50.0% | |
| CCCCGCATGTGTTTAGATGA+TGG | + | chr1.1:49697249-49697268 | MS.gene30862:CDS | 50.0% | |
| CGACCCCACTTAGTGGAATA+AGG | + | chr1.1:49696323-49696342 | MS.gene30862:intron | 50.0% | |
| CGTCTTCTCTTCATCCTCGT+CGG | + | chr1.1:49693794-49693813 | MS.gene30862:CDS | 50.0% | |
| CTCTAGACAAGCCTTCCATC+AGG | + | chr1.1:49694406-49694425 | MS.gene30862:intron | 50.0% | |
| CTGCTGATGATCCACACATG+AGG | + | chr1.1:49698343-49698362 | MS.gene30862:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1.1:49696495-49696514 | None:intergenic | 50.0% | |
| CTTCGTTGCCGGAATTGAAC+CGG | - | chr1.1:49693916-49693935 | None:intergenic | 50.0% | |
| GCATGTTGGACCTTTCAACC+TGG | + | chr1.1:49698003-49698022 | MS.gene30862:CDS | 50.0% | |
| GCTTTCACGCATAAGTCCAC+CGG | + | chr1.1:49693856-49693875 | MS.gene30862:CDS | 50.0% | |
| GGGAACCAAAAATCCCACTG+AGG | + | chr1.1:49698403-49698422 | MS.gene30862:CDS | 50.0% | |
| GTAGTTGATCGATCTGGGGA+GGG | - | chr1.1:49693759-49693778 | None:intergenic | 50.0% | |
| GTGTCGTCAGATATTGGCCA+TGG | - | chr1.1:49697105-49697124 | None:intergenic | 50.0% | |
| TGGACTTATGCGTGAAAGCG+TGG | - | chr1.1:49693855-49693874 | None:intergenic | 50.0% | |
| TGTCCAACACTCCTGATGGA+AGG | - | chr1.1:49694420-49694439 | None:intergenic | 50.0% | |
| TTGGCCATGGCAGATATCAG+TGG | - | chr1.1:49697092-49697111 | None:intergenic | 50.0% | |
| ! | AAGCCTTCCATCAGGAGTGT+TGG | + | chr1.1:49694414-49694433 | MS.gene30862:intron | 50.0% |
| ! | CACCATGTTAGAGCTTGCTC+AGG | + | chr1.1:49698042-49698061 | MS.gene30862:CDS | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr1.1:49696501-49696520 | None:intergenic | 50.0% |
| ! | CCTTCCCTCAGTGGGATTTT+TGG | - | chr1.1:49698411-49698430 | None:intergenic | 50.0% |
| ! | CGATTCACAGGTTAATGGGC+TGG | + | chr1.1:49697961-49697980 | MS.gene30862:intron | 50.0% |
| ! | CGGTCAGTATGCCAGGATTT+TGG | - | chr1.1:49697014-49697033 | None:intergenic | 50.0% |
| ! | GAAGGTGCATCCCTTAGAGT+GGG | + | chr1.1:49693932-49693951 | MS.gene30862:CDS | 50.0% |
| ! | GGACTTATGCGTGAAAGCGT+GGG | - | chr1.1:49693854-49693873 | None:intergenic | 50.0% |
| ! | TGGGGCTAGCAAAGAGAATC+GGG | + | chr1.1:49695042-49695061 | MS.gene30862:CDS | 50.0% |
| ! | TTTTTGTCCCTCGTGTCTGC+AGG | + | chr1.1:49697378-49697397 | MS.gene30862:intron | 50.0% |
| !! | GGATTGGTCCGGTTCAATTC+CGG | + | chr1.1:49693905-49693924 | MS.gene30862:CDS | 50.0% |
| !! | TAATGGGCTGGCAGCTTTGA+TGG | + | chr1.1:49697973-49697992 | MS.gene30862:CDS | 50.0% |
| AAGGGATGCACCTTCGTTGC+CGG | - | chr1.1:49693927-49693946 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1.1:49696317-49696336 | None:intergenic | 55.0% | |
| AGGCTGAGAGTGGTGGTTAC+TGG | + | chr1.1:49693983-49694002 | MS.gene30862:CDS | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1.1:49696316-49696335 | MS.gene30862:intron | 55.0% | |
| CACATGTCGGTCAGTATGCC+AGG | - | chr1.1:49697021-49697040 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr1.1:49695865-49695884 | None:intergenic | 55.0% | |
| CCCACCACTGATATCTGCCA+TGG | + | chr1.1:49697085-49697104 | MS.gene30862:intron | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr1.1:49695862-49695881 | MS.gene30862:intron | 55.0% | |
| CCTTAGAGTGGGGAGGATTC+CGG | + | chr1.1:49693943-49693962 | MS.gene30862:CDS | 55.0% | |
| CCTTTCAACCTGGGTAACCC+AGG | + | chr1.1:49698013-49698032 | MS.gene30862:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1.1:49696493-49696512 | MS.gene30862:intron | 55.0% | |
| CGGAATCCTCCCCACTCTAA+GGG | - | chr1.1:49693945-49693964 | None:intergenic | 55.0% | |
| CGGTTCAATTCCGGCAACGA+AGG | + | chr1.1:49693914-49693933 | MS.gene30862:CDS | 55.0% | |
| CGTATAGCCTGCAGACACGA+GGG | - | chr1.1:49697388-49697407 | None:intergenic | 55.0% | |
| CTGAGAGTGGTGGTTACTGG+TGG | + | chr1.1:49693986-49694005 | MS.gene30862:CDS | 55.0% | |
| CTGGCATACTGACCGACATG+TGG | + | chr1.1:49697019-49697038 | MS.gene30862:intron | 55.0% | |
| GCAGTGTCCAACACTCCTGA+TGG | - | chr1.1:49694424-49694443 | None:intergenic | 55.0% | |
| GCCATGGCAGATATCAGTGG+TGG | - | chr1.1:49697089-49697108 | None:intergenic | 55.0% | |
| GGTAAAAACGAACCGGCCTC+CGG | - | chr1.1:49693878-49693897 | None:intergenic | 55.0% | |
| GGTAGTTGATCGATCTGGGG+AGG | - | chr1.1:49693760-49693779 | None:intergenic | 55.0% | |
| TAGCAAAGAGAATCGGGGCG+AGG | + | chr1.1:49695048-49695067 | MS.gene30862:CDS | 55.0% | |
| TGAATTCGCCTGGGTTACCC+AGG | - | chr1.1:49698024-49698043 | None:intergenic | 55.0% | |
| TTCACGCATAAGTCCACCGG+AGG | + | chr1.1:49693859-49693878 | MS.gene30862:CDS | 55.0% | |
| TTTCACCACGGCGCCATACT+CGG | - | chr1.1:49697056-49697075 | None:intergenic | 55.0% | |
| ! | AGTGGTGGTTACTGGTGGTG+CGG | + | chr1.1:49693991-49694010 | MS.gene30862:CDS | 55.0% |
| ! | CCTGGGTTACCCAGGTTGAA+AGG | - | chr1.1:49698016-49698035 | None:intergenic | 55.0% |
| ! | CGAAGGTGCATCCCTTAGAG+TGG | + | chr1.1:49693931-49693950 | MS.gene30862:CDS | 55.0% |
| ! | GGGGCTAGCAAAGAGAATCG+GGG | + | chr1.1:49695043-49695062 | MS.gene30862:CDS | 55.0% |
| AAAAACGAACCGGCCTCCGG+TGG | - | chr1.1:49693875-49693894 | None:intergenic | 60.0% | |
| AAGGCCCGGGGTTCAAACCT+CGG | + | chr1.1:49695908-49695927 | MS.gene30862:intron | 60.0% | |
| ACTAAGTGGGGTCGGCTACC+TGG | - | chr1.1:49696487-49696506 | None:intergenic | 60.0% | |
| AGAGGCAGACCTTCCCTCAG+TGG | - | chr1.1:49698420-49698439 | None:intergenic | 60.0% | |
| AGGATTCCGGCGGGAATTGG+TGG | + | chr1.1:49693956-49693975 | MS.gene30862:CDS | 60.0% | |
| AGGTAGCCGACCCCACTTAG+TGG | + | chr1.1:49696486-49696505 | MS.gene30862:intron | 60.0% | |
| CACGGCGCCATACTCGGATA+TGG | - | chr1.1:49697050-49697069 | None:intergenic | 60.0% | |
| CATATCCGAGTATGGCGCCG+TGG | + | chr1.1:49697048-49697067 | MS.gene30862:intron | 60.0% | |
| CCGGAATCCTCCCCACTCTA+AGG | - | chr1.1:49693946-49693965 | None:intergenic | 60.0% | |
| GAGGCAGACCTTCCCTCAGT+GGG | - | chr1.1:49698419-49698438 | None:intergenic | 60.0% | |
| GAGGGAAGGTCTGCCTCTGA+TGG | + | chr1.1:49698422-49698441 | MS.gene30862:CDS | 60.0% | |
| GATATGGCGGCGCCACATGT+CGG | - | chr1.1:49697034-49697053 | None:intergenic | 60.0% | |
| GCGTATAGCCTGCAGACACG+AGG | - | chr1.1:49697389-49697408 | None:intergenic | 60.0% | |
| GGCGCCATACTCGGATATGG+CGG | - | chr1.1:49697047-49697066 | None:intergenic | 60.0% | |
| GGTAGCCGACCCCACTTAGT+GGG | + | chr1.1:49696487-49696506 | MS.gene30862:intron | 60.0% | |
| GTGCATCCCTTAGAGTGGGG+AGG | + | chr1.1:49693936-49693955 | MS.gene30862:CDS | 60.0% | |
| TAGAGTGGGGAGGATTCCGG+CGG | + | chr1.1:49693946-49693965 | MS.gene30862:CDS | 60.0% | |
| ! | ACTGGTGGTGCGGGGTTTGT+TGG | + | chr1.1:49694001-49694020 | MS.gene30862:CDS | 60.0% |
| ! | GGGCTGGCAGCTTTGATGGA+TGG | + | chr1.1:49697977-49697996 | MS.gene30862:CDS | 60.0% |
| ! | GTGGTGGTTACTGGTGGTGC+GGG | + | chr1.1:49693992-49694011 | MS.gene30862:CDS | 60.0% |
| ! | TGGTGGTTACTGGTGGTGCG+GGG | + | chr1.1:49693993-49694012 | MS.gene30862:CDS | 60.0% |
| ! | TTCCGGCGGGAATTGGTGGT+CGG | + | chr1.1:49693960-49693979 | MS.gene30862:CDS | 60.0% |
| !! | TCATCGAGGTGCTGGCGTTG+AGG | + | chr1.1:49695297-49695316 | MS.gene30862:CDS | 60.0% |
| AGAGTGGGGAGGATTCCGGC+GGG | + | chr1.1:49693947-49693966 | MS.gene30862:CDS | 65.0% | |
| AGGGGTCGGGTGCACAAGAG+TGG | - | chr1.1:49696904-49696923 | None:intergenic | 65.0% | |
| CGCATAAGTCCACCGGAGGC+CGG | + | chr1.1:49693863-49693882 | MS.gene30862:CDS | 65.0% | |
| CTCCGACCACCAATTCCCGC+CGG | - | chr1.1:49693965-49693984 | None:intergenic | 65.0% | |
| GGCGCCGCCATATCCGAGTA+TGG | + | chr1.1:49697040-49697059 | MS.gene30862:intron | 65.0% | |
| GGGAGGATTCCGGCGGGAAT+TGG | + | chr1.1:49693953-49693972 | MS.gene30862:CDS | 65.0% | |
| GGGGTCGGGTGCACAAGAGT+GGG | - | chr1.1:49696903-49696922 | None:intergenic | 65.0% | |
| GGGTCGGGTGCACAAGAGTG+GGG | - | chr1.1:49696902-49696921 | None:intergenic | 65.0% | |
| GGTCGGGTGCACAAGAGTGG+GGG | - | chr1.1:49696901-49696920 | None:intergenic | 65.0% | |
| GGTGGCCGAGGTTTGAACCC+CGG | - | chr1.1:49695916-49695935 | None:intergenic | 65.0% | |
| GTGGCCGAGGTTTGAACCCC+GGG | - | chr1.1:49695915-49695934 | None:intergenic | 65.0% | |
| TGGTCGGAGGCTGAGAGTGG+TGG | + | chr1.1:49693976-49693995 | MS.gene30862:CDS | 65.0% | |
| TGGTGGTCGGAGGCTGAGAG+TGG | + | chr1.1:49693973-49693992 | MS.gene30862:CDS | 65.0% | |
| ! | CGGCGGGAATTGGTGGTCGG+AGG | + | chr1.1:49693963-49693982 | MS.gene30862:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 49693704 | 49698500 | 49693704 | ID=MS.gene30862 |
| chr1.1 | mRNA | 49693704 | 49698500 | 49693704 | ID=MS.gene30862.t1;Parent=MS.gene30862 |
| chr1.1 | exon | 49693704 | 49694216 | 49693704 | ID=MS.gene30862.t1.exon1;Parent=MS.gene30862.t1 |
| chr1.1 | CDS | 49693704 | 49694216 | 49693704 | ID=cds.MS.gene30862.t1;Parent=MS.gene30862.t1 |
| chr1.1 | exon | 49695014 | 49695158 | 49695014 | ID=MS.gene30862.t1.exon2;Parent=MS.gene30862.t1 |
| chr1.1 | CDS | 49695014 | 49695158 | 49695014 | ID=cds.MS.gene30862.t1;Parent=MS.gene30862.t1 |
| chr1.1 | exon | 49695239 | 49695318 | 49695239 | ID=MS.gene30862.t1.exon3;Parent=MS.gene30862.t1 |
| chr1.1 | CDS | 49695239 | 49695318 | 49695239 | ID=cds.MS.gene30862.t1;Parent=MS.gene30862.t1 |
| chr1.1 | exon | 49697216 | 49697299 | 49697216 | ID=MS.gene30862.t1.exon4;Parent=MS.gene30862.t1 |
| chr1.1 | CDS | 49697216 | 49697299 | 49697216 | ID=cds.MS.gene30862.t1;Parent=MS.gene30862.t1 |
| chr1.1 | exon | 49697400 | 49697474 | 49697400 | ID=MS.gene30862.t1.exon5;Parent=MS.gene30862.t1 |
| chr1.1 | CDS | 49697400 | 49697474 | 49697400 | ID=cds.MS.gene30862.t1;Parent=MS.gene30862.t1 |
| chr1.1 | exon | 49697971 | 49698063 | 49697971 | ID=MS.gene30862.t1.exon6;Parent=MS.gene30862.t1 |
| chr1.1 | CDS | 49697971 | 49698063 | 49697971 | ID=cds.MS.gene30862.t1;Parent=MS.gene30862.t1 |
| chr1.1 | exon | 49698291 | 49698500 | 49698291 | ID=MS.gene30862.t1.exon7;Parent=MS.gene30862.t1 |
| chr1.1 | CDS | 49698291 | 49698500 | 49698291 | ID=cds.MS.gene30862.t1;Parent=MS.gene30862.t1 |
| Gene Sequence |
| Protein sequence |