Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30891.t1 | RHN79846.1 | 96.9 | 286 | 3 | 1 | 1 | 280 | 59 | 344 | 2.00E-151 | 545 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30891.t1 | Q10S93 | 77.8 | 234 | 52 | 0 | 47 | 280 | 60 | 293 | 7.7e-104 | 378.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30891.t1 | A0A072VJS4 | 96.9 | 286 | 3 | 1 | 1 | 280 | 1 | 286 | 1.4e-151 | 545.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011389 | MS.gene30891 | PPI |
| MS.gene065461 | MS.gene30891 | PPI |
| MS.gene30891 | MS.gene057156 | PPI |
| MS.gene30891 | MS.gene033347 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30891.t1 | MTR_1g067050 | 96.853 | 286 | 3 | 1 | 1 | 280 | 1 | 286 | 0.0 | 559 |
| MS.gene30891.t1 | MTR_7g100530 | 74.286 | 280 | 60 | 3 | 1 | 280 | 1 | 268 | 1.20e-143 | 404 |
| MS.gene30891.t1 | MTR_4g103800 | 31.683 | 202 | 120 | 4 | 49 | 245 | 31 | 219 | 1.69e-28 | 109 |
| MS.gene30891.t1 | MTR_2g461290 | 33.508 | 191 | 106 | 4 | 54 | 241 | 79 | 251 | 4.95e-25 | 104 |
| MS.gene30891.t1 | MTR_4g035170 | 31.414 | 191 | 112 | 5 | 54 | 242 | 94 | 267 | 4.24e-21 | 90.9 |
| MS.gene30891.t1 | MTR_4g103800 | 30.909 | 165 | 106 | 3 | 49 | 208 | 31 | 192 | 4.41e-21 | 88.6 |
| MS.gene30891.t1 | MTR_8g009520 | 26.699 | 206 | 105 | 5 | 44 | 247 | 19 | 180 | 1.81e-16 | 76.6 |
| MS.gene30891.t1 | MTR_4g035850 | 24.242 | 231 | 126 | 5 | 35 | 263 | 46 | 229 | 2.20e-16 | 77.0 |
| MS.gene30891.t1 | MTR_4g035850 | 24.242 | 231 | 126 | 5 | 35 | 263 | 23 | 206 | 2.59e-16 | 76.3 |
| MS.gene30891.t1 | MTR_5g068940 | 23.810 | 231 | 127 | 5 | 35 | 263 | 23 | 206 | 1.08e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30891.t1 | AT2G37250 | 67.361 | 288 | 79 | 3 | 3 | 280 | 2 | 284 | 1.33e-136 | 387 |
| MS.gene30891.t1 | AT2G39270 | 72.574 | 237 | 63 | 1 | 44 | 280 | 61 | 295 | 7.14e-110 | 320 |
| MS.gene30891.t1 | AT3G01820 | 34.529 | 223 | 110 | 4 | 48 | 269 | 63 | 250 | 5.13e-35 | 127 |
| MS.gene30891.t1 | AT5G50370 | 32.227 | 211 | 123 | 5 | 49 | 254 | 36 | 231 | 9.47e-30 | 113 |
| MS.gene30891.t1 | AT5G63400 | 31.863 | 204 | 121 | 4 | 49 | 247 | 35 | 225 | 7.94e-29 | 110 |
| MS.gene30891.t1 | AT5G35170 | 33.019 | 212 | 121 | 4 | 45 | 253 | 77 | 270 | 1.54e-28 | 114 |
| MS.gene30891.t1 | AT5G35170 | 33.019 | 212 | 121 | 4 | 45 | 253 | 77 | 270 | 1.68e-28 | 114 |
| MS.gene30891.t1 | AT5G50370 | 32.990 | 194 | 112 | 4 | 49 | 237 | 36 | 216 | 2.33e-27 | 106 |
| MS.gene30891.t1 | AT5G47840 | 31.776 | 214 | 120 | 7 | 33 | 241 | 54 | 246 | 7.19e-25 | 100 |
| MS.gene30891.t1 | AT5G47840 | 31.280 | 211 | 122 | 6 | 33 | 241 | 54 | 243 | 8.50e-25 | 100 |
| MS.gene30891.t1 | AT5G63400 | 34.286 | 140 | 85 | 2 | 49 | 183 | 35 | 172 | 6.56e-23 | 93.6 |
| MS.gene30891.t1 | AT4G25280 | 27.064 | 218 | 114 | 4 | 53 | 268 | 59 | 233 | 7.99e-22 | 92.0 |
| MS.gene30891.t1 | AT4G25280 | 27.064 | 218 | 114 | 4 | 53 | 268 | 59 | 233 | 7.99e-22 | 92.0 |
| MS.gene30891.t1 | AT3G60180 | 28.302 | 212 | 102 | 5 | 44 | 251 | 19 | 184 | 1.66e-19 | 84.7 |
| MS.gene30891.t1 | AT3G60180 | 28.302 | 212 | 102 | 5 | 44 | 251 | 19 | 184 | 1.66e-19 | 84.7 |
| MS.gene30891.t1 | AT5G26667 | 26.866 | 201 | 102 | 4 | 53 | 251 | 20 | 177 | 1.34e-18 | 82.0 |
| MS.gene30891.t1 | AT5G26667 | 26.866 | 201 | 102 | 4 | 53 | 251 | 20 | 177 | 1.34e-18 | 82.0 |
| MS.gene30891.t1 | AT5G26667 | 26.866 | 201 | 102 | 4 | 53 | 251 | 20 | 177 | 1.34e-18 | 82.0 |
| MS.gene30891.t1 | AT5G26667 | 26.866 | 201 | 102 | 4 | 53 | 251 | 20 | 177 | 1.48e-18 | 82.4 |
Find 89 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCAGCAGAGGAAAATTAT+TGG | 0.236642 | 1.2:+50475884 | MS.gene30891:CDS |
| CGTTGCTTCTATTGACATTA+AGG | 0.253863 | 1.2:+50475447 | MS.gene30891:CDS |
| AGCAACTTCGGCCAAGATTC+TGG | 0.268197 | 1.2:-50475930 | None:intergenic |
| AGCGGAGCCATGACAATTCC+AGG | 0.354690 | 1.2:-50475484 | None:intergenic |
| ATCTGGTCCACTTTCTTCCC+AGG | 0.364483 | 1.2:+50471898 | MS.gene30891:CDS |
| GAACTGGGATTTATTCTTGA+TGG | 0.380261 | 1.2:+50474850 | MS.gene30891:CDS |
| CGTGATGAGCTCTCTTCATC+TGG | 0.386900 | 1.2:+50471881 | MS.gene30891:CDS |
| TGGGGAGGCTAAAGGTGAAC+TGG | 0.427253 | 1.2:+50474834 | MS.gene30891:CDS |
| TGGGTCTTCCTCGGTTGTCC+TGG | 0.431097 | 1.2:+50471782 | MS.gene30891:CDS |
| GGTTGTCCTGGCGTCGGTAA+AGG | 0.432318 | 1.2:+50471794 | MS.gene30891:CDS |
| CGGGAGGAATTCCAGAATCT+TGG | 0.441656 | 1.2:+50475919 | MS.gene30891:CDS |
| AATTGTAAAACAAGGTCAAT+TGG | 0.453568 | 1.2:+50474765 | MS.gene30891:CDS |
| ACTGCTTGCTTTATTGTTCG+AGG | 0.454143 | 1.2:-50474877 | None:intergenic |
| GGACGCGCGCGTGGAAAGGC+GGG | 0.456250 | 1.2:-50471651 | None:intergenic |
| AGCTTTGACATACAATTTGT+AGG | 0.464203 | 1.2:-50475514 | None:intergenic |
| ATTGACATTAAGGCCGAGAA+TGG | 0.474266 | 1.2:+50475457 | MS.gene30891:CDS |
| CCTTCATCTCTTCCGTCGCA+AGG | 0.489419 | 1.2:+50471672 | MS.gene30891:CDS |
| CTGAAGCAGTTGTCAAAGAA+AGG | 0.490070 | 1.2:+50475557 | MS.gene30891:CDS |
| CACGTGCGGTGGGTCTTCCT+CGG | 0.490906 | 1.2:+50471773 | MS.gene30891:CDS |
| AATTCCAGGGATCCCATTCT+CGG | 0.494212 | 1.2:-50475470 | None:intergenic |
| AGCCGTCTTTCAAATCTCCT+TGG | 0.506874 | 1.2:+50471827 | MS.gene30891:CDS |
| GGAGGATTTGCAATCAGTGT+GGG | 0.507359 | 1.2:+50475413 | MS.gene30891:CDS |
| GGTGTTCCTCACATCGCCAC+TGG | 0.508449 | 1.2:+50471848 | MS.gene30891:CDS |
| CTTGATGATGGGGAGGCTAA+AGG | 0.510077 | 1.2:+50474826 | MS.gene30891:CDS |
| CGTGGAAAGGCGGGTCGTGA+AGG | 0.518854 | 1.2:-50471642 | None:intergenic |
| CCTTGCGACGGAAGAGATGA+AGG | 0.520428 | 1.2:-50471672 | None:intergenic |
| TGCTTGAGAAATGCCTTGGC+AGG | 0.520462 | 1.2:+50475392 | MS.gene30891:CDS |
| TTTCAAACCTGGGAAGAAAG+TGG | 0.524167 | 1.2:-50471905 | None:intergenic |
| TATCAAAGAGACTTGATGAT+GGG | 0.527393 | 1.2:+50474815 | MS.gene30891:CDS |
| GCGGGTCGTGAAGGCCGCCA+TGG | 0.532458 | 1.2:-50471633 | None:intergenic |
| TGCTCAGGAAATATTGGAAG+GGG | 0.532562 | 1.2:+50475321 | MS.gene30891:intron |
| TTGACATTAAGGCCGAGAAT+GGG | 0.535202 | 1.2:+50475458 | MS.gene30891:CDS |
| ATTATTGGAGTTTAACCTGC+CGG | 0.535586 | 1.2:+50475899 | MS.gene30891:CDS |
| CTGCGGTAAAACTCCTCCAC+AGG | 0.544059 | 1.2:-50475867 | None:intergenic |
| TATGCTCAGGAAATATTGGA+AGG | 0.545400 | 1.2:+50475319 | MS.gene30891:intron |
| TGAAGGACGCGCGCGTGGAA+AGG | 0.546781 | 1.2:-50471655 | None:intergenic |
| GCTTCGAATATACAATGAAA+CGG | 0.548251 | 1.2:+50475579 | MS.gene30891:CDS |
| CGGGTCGTGAAGGCCGCCAT+GGG | 0.548319 | 1.2:-50471632 | None:intergenic |
| TGGCGCGTGGGAGTTGAGCT+CGG | 0.549856 | 1.2:-50471708 | None:intergenic |
| TTATCAAAGAGACTTGATGA+TGG | 0.553266 | 1.2:+50474814 | MS.gene30891:CDS |
| TTGACTTGGTTATCAATCTG+AGG | 0.557110 | 1.2:+50475353 | MS.gene30891:CDS |
| AGAGATGAAGGACGCGCGCG+TGG | 0.563381 | 1.2:-50471660 | None:intergenic |
| ATTCTGGAATTCCTCCCGGC+AGG | 0.565404 | 1.2:-50475914 | None:intergenic |
| GGAGAGGTAGCGCCTTGCGA+CGG | 0.566154 | 1.2:-50471684 | None:intergenic |
| CAACAAGACGGAATGGCGCG+TGG | 0.568499 | 1.2:-50471721 | None:intergenic |
| TTATTGGAGTTTAACCTGCC+GGG | 0.572349 | 1.2:+50475900 | MS.gene30891:CDS |
| GGGAGTTGAGCTCGGAGGAG+AGG | 0.572603 | 1.2:-50471700 | None:intergenic |
| AAGGCCGAGAATGGGATCCC+TGG | 0.573980 | 1.2:+50475466 | MS.gene30891:CDS |
| TTAAGAGCATGTAGCAACTT+CGG | 0.574130 | 1.2:-50475942 | None:intergenic |
| AGGACGCGCGCGTGGAAAGG+CGG | 0.575120 | 1.2:-50471652 | None:intergenic |
| TTCCTCGGTTGTCCTGGCGT+CGG | 0.575446 | 1.2:+50471788 | MS.gene30891:CDS |
| CAAGATTCTGGAATTCCTCC+CGG | 0.577031 | 1.2:-50475918 | None:intergenic |
| TTGAGAAATGCCTTGGCAGG+AGG | 0.577558 | 1.2:+50475395 | MS.gene30891:CDS |
| ATGCTCAGGAAATATTGGAA+GGG | 0.580503 | 1.2:+50475320 | MS.gene30891:intron |
| AGGGGTAGCTGACATTGACT+TGG | 0.587799 | 1.2:+50475339 | MS.gene30891:CDS |
| AGAAGAACAGTCACGTGCGG+TGG | 0.588389 | 1.2:+50471762 | MS.gene30891:CDS |
| GTACTGCTTGAGAAATGCCT+TGG | 0.592269 | 1.2:+50475388 | MS.gene30891:CDS |
| TTCCGTCTTGTTGCTCCACG+TGG | 0.592404 | 1.2:+50471731 | MS.gene30891:CDS |
| GATTGCAAATCCTCCTGCCA+AGG | 0.594641 | 1.2:-50475405 | None:intergenic |
| TAGGTGCCTTTACCGACGCC+AGG | 0.599918 | 1.2:-50471800 | None:intergenic |
| TGGGATCCCTGGAATTGTCA+TGG | 0.601248 | 1.2:+50475477 | MS.gene30891:CDS |
| CACCAAGGAGATTTGAAAGA+CGG | 0.602704 | 1.2:-50471829 | None:intergenic |
| AAAACAAGGTCAATTGGTGT+CGG | 0.603952 | 1.2:+50474771 | MS.gene30891:CDS |
| GAAGAACAGTCACGTGCGGT+GGG | 0.612148 | 1.2:+50471763 | MS.gene30891:CDS |
| ATTGCAGAGTCGGCCTGTGG+AGG | 0.614448 | 1.2:+50475854 | MS.gene30891:intron |
| AGGAGGATTTGCAATCAGTG+TGG | 0.620162 | 1.2:+50475412 | MS.gene30891:CDS |
| GGGGAGGCTAAAGGTGAACT+GGG | 0.621129 | 1.2:+50474835 | MS.gene30891:CDS |
| CTATCAGAAATTGTAAAACA+AGG | 0.622888 | 1.2:+50474757 | MS.gene30891:CDS |
| GAGGATTTGCAATCAGTGTG+GGG | 0.624942 | 1.2:+50475414 | MS.gene30891:CDS |
| AAAGAGACTTGATGATGGGG+AGG | 0.628690 | 1.2:+50474819 | MS.gene30891:CDS |
| ATGATTGCAGAGTCGGCCTG+TGG | 0.629533 | 1.2:+50475851 | MS.gene30891:intron |
| AGATCACCAGTGGCGATGTG+AGG | 0.631554 | 1.2:-50471854 | None:intergenic |
| ATCAAAGAGACTTGATGATG+GGG | 0.636165 | 1.2:+50474816 | MS.gene30891:CDS |
| AACAAGACGGAATGGCGCGT+GGG | 0.639200 | 1.2:-50471720 | None:intergenic |
| ATTTGAAAGACGGCTAGCGT+AGG | 0.640074 | 1.2:-50471819 | None:intergenic |
| CAATTTGTAGGTGGAAGAAG+CGG | 0.642392 | 1.2:-50475502 | None:intergenic |
| GCGGAGCCATGACAATTCCA+GGG | 0.644856 | 1.2:-50475483 | None:intergenic |
| CGTGGAGCAACAAGACGGAA+TGG | 0.654977 | 1.2:-50471728 | None:intergenic |
| TTCTTCTGATCTTCACCACG+TGG | 0.659321 | 1.2:-50471746 | None:intergenic |
| TCTTAATCTTGATGATTACG+AGG | 0.661204 | 1.2:+50475959 | MS.gene30891:CDS |
| AGGATTTGCAATCAGTGTGG+GGG | 0.661390 | 1.2:+50475415 | MS.gene30891:CDS |
| CACCACGTGGAGCAACAAGA+CGG | 0.662591 | 1.2:-50471733 | None:intergenic |
| TTTGACATACAATTTGTAGG+TGG | 0.663193 | 1.2:-50475511 | None:intergenic |
| ATCACGAACGAGATCACCAG+TGG | 0.681112 | 1.2:-50471864 | None:intergenic |
| TTGGAGTTTAACCTGCCGGG+AGG | 0.683112 | 1.2:+50475903 | MS.gene30891:CDS |
| ATCAGAAGAACAGTCACGTG+CGG | 0.685783 | 1.2:+50471759 | MS.gene30891:CDS |
| TACCGACGCCAGGACAACCG+AGG | 0.695680 | 1.2:-50471790 | None:intergenic |
| CGCGTGGGAGTTGAGCTCGG+AGG | 0.738854 | 1.2:-50471705 | None:intergenic |
| TGGCGATGTGAGGAACACCA+AGG | 0.756664 | 1.2:-50471844 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTAAATTAATTTTTTT+TGG | + | chr1.2:50472308-50472327 | MS.gene30891:intron | 0.0% |
| !!! | ACATTTATTTTTATTATGAT+GGG | + | chr1.2:50475705-50475724 | MS.gene30891:intron | 10.0% |
| !!! | TACATTTATTTTTATTATGA+TGG | + | chr1.2:50475704-50475723 | MS.gene30891:intron | 10.0% |
| !! | AAATCAAAAGAATTAAAACT+TGG | - | chr1.2:50473120-50473139 | None:intergenic | 15.0% |
| !! | AGTAGATTAAGTATTTATTA+AGG | - | chr1.2:50474299-50474318 | None:intergenic | 15.0% |
| !! | ATTAAGTATTTATTAAGGAA+CGG | - | chr1.2:50474294-50474313 | None:intergenic | 15.0% |
| !! | CAAATTTATAAAAACCTAAT+TGG | + | chr1.2:50473000-50473019 | MS.gene30891:intron | 15.0% |
| !! | CGATATTCATAAAATTTATT+TGG | - | chr1.2:50474480-50474499 | None:intergenic | 15.0% |
| !!! | AAATATTTTGCAAACAAAAT+AGG | - | chr1.2:50474953-50474972 | None:intergenic | 15.0% |
| !!! | AATATTTTGCAAACAAAATA+GGG | - | chr1.2:50474952-50474971 | None:intergenic | 15.0% |
| !!! | GTTATATAAGTTAGTTTAAT+TGG | + | chr1.2:50472375-50472394 | MS.gene30891:intron | 15.0% |
| !!! | TATTTAAAATTGACATTTTC+CGG | + | chr1.2:50474264-50474283 | MS.gene30891:intron | 15.0% |
| !!! | TTTGTTCATTTATTTTTCAT+TGG | - | chr1.2:50475037-50475056 | None:intergenic | 15.0% |
| !!! | TTTTTATTTTTAAATTCCTG+AGG | + | chr1.2:50475148-50475167 | MS.gene30891:intron | 15.0% |
| !! | AAATTAAAGGAACCTAAATA+AGG | - | chr1.2:50475085-50475104 | None:intergenic | 20.0% |
| !! | AGCTAGTAAATCTTTAAATT+TGG | + | chr1.2:50474428-50474447 | MS.gene30891:intron | 20.0% |
| !!! | ATAAGTTTGCTTGTTTAAAA+AGG | - | chr1.2:50475250-50475269 | None:intergenic | 20.0% |
| !!! | ATATTTTGCAAACAAAATAG+GGG | - | chr1.2:50474951-50474970 | None:intergenic | 20.0% |
| !!! | ATGTCAATTTTAAATACATG+CGG | - | chr1.2:50474260-50474279 | None:intergenic | 20.0% |
| !!! | TATAAGTTAGTTTAATTGGT+AGG | + | chr1.2:50472379-50472398 | MS.gene30891:intron | 20.0% |
| ! | AATTGTAAAACAAGGTCAAT+TGG | + | chr1.2:50474765-50474784 | MS.gene30891:CDS | 25.0% |
| ! | ATATAGCCATTTGATATCTA+GGG | - | chr1.2:50473198-50473217 | None:intergenic | 25.0% |
| ! | ATTGATATAAAAAGAACACC+AGG | - | chr1.2:50475179-50475198 | None:intergenic | 25.0% |
| ! | CTATCAGAAATTGTAAAACA+AGG | + | chr1.2:50474757-50474776 | MS.gene30891:CDS | 25.0% |
| ! | GTGGTAGTTATAAAATTATG+TGG | + | chr1.2:50472543-50472562 | MS.gene30891:intron | 25.0% |
| ! | TCTTACAAAGAGATACAAAT+GGG | - | chr1.2:50473730-50473749 | None:intergenic | 25.0% |
| !! | ACTGTATTTCTTGTGTTATT+GGG | + | chr1.2:50474386-50474405 | MS.gene30891:intron | 25.0% |
| !! | CATTGGATATTACATTTTTC+AGG | - | chr1.2:50475020-50475039 | None:intergenic | 25.0% |
| !! | TAGTACATAACAGATTTTCA+AGG | - | chr1.2:50475280-50475299 | None:intergenic | 25.0% |
| !! | TATTTTCCAATTAGCTAAAC+AGG | - | chr1.2:50472899-50472918 | None:intergenic | 25.0% |
| !! | TCATGAATGATATTTGCTTT+TGG | + | chr1.2:50472695-50472714 | MS.gene30891:intron | 25.0% |
| !! | TTAAAGATTTACTAGCTTGA+AGG | - | chr1.2:50474425-50474444 | None:intergenic | 25.0% |
| !! | TTTTTATGCTCAGGAAATAT+TGG | + | chr1.2:50475315-50475334 | MS.gene30891:intron | 25.0% |
| !!! | ATGAATGATATTTGCTTTTG+GGG | + | chr1.2:50472697-50472716 | MS.gene30891:intron | 25.0% |
| !!! | ATGTCTTTTTTAACTGGTTT+AGG | + | chr1.2:50475815-50475834 | MS.gene30891:intron | 25.0% |
| !!! | ATGTTCATGTCTTTTTTAAC+TGG | + | chr1.2:50475809-50475828 | MS.gene30891:intron | 25.0% |
| !!! | CATGAATGATATTTGCTTTT+GGG | + | chr1.2:50472696-50472715 | MS.gene30891:intron | 25.0% |
| !!! | GTTTTGATTTGTAAGTGATT+AGG | + | chr1.2:50474519-50474538 | MS.gene30891:intron | 25.0% |
| !!! | TTTTGATTTTGAGCCAATTA+GGG | + | chr1.2:50473131-50473150 | MS.gene30891:intron | 25.0% |
| AAACCACAAGCAAAAGATAA+AGG | - | chr1.2:50473854-50473873 | None:intergenic | 30.0% | |
| AAATCAAAGGAGGTAACTTT+AGG | + | chr1.2:50473546-50473565 | MS.gene30891:intron | 30.0% | |
| AACCACAAGCAAAAGATAAA+GGG | - | chr1.2:50473853-50473872 | None:intergenic | 30.0% | |
| AATCAAAGGAGGTAACTTTA+GGG | + | chr1.2:50473547-50473566 | MS.gene30891:intron | 30.0% | |
| AATCATAGTACTCCAGTAAA+GGG | - | chr1.2:50474676-50474695 | None:intergenic | 30.0% | |
| ACGAAGTTTAGAAAACATCA+CGG | - | chr1.2:50475226-50475245 | None:intergenic | 30.0% | |
| CAGTGAGTATATCTTCAATT+TGG | + | chr1.2:50474896-50474915 | MS.gene30891:intron | 30.0% | |
| CATATAGCCATTTGATATCT+AGG | - | chr1.2:50473199-50473218 | None:intergenic | 30.0% | |
| CATGATTATTATCCAAGTGA+TGG | + | chr1.2:50472146-50472165 | MS.gene30891:intron | 30.0% | |
| CCTGAGCATAAAAAAAAGAA+AGG | - | chr1.2:50475309-50475328 | None:intergenic | 30.0% | |
| CTAAGTAATCCTTACAAAGT+CGG | - | chr1.2:50472978-50472997 | None:intergenic | 30.0% | |
| CTATACAAAGTGAGATATGT+TGG | - | chr1.2:50472453-50472472 | None:intergenic | 30.0% | |
| CTCTTACAAAGAGATACAAA+TGG | - | chr1.2:50473731-50473750 | None:intergenic | 30.0% | |
| CTGATTAGGTAGGAAATTAA+AGG | - | chr1.2:50475098-50475117 | None:intergenic | 30.0% | |
| GACTGTATTTCTTGTGTTAT+TGG | + | chr1.2:50474385-50474404 | MS.gene30891:intron | 30.0% | |
| GATTCATGAATATGATACTC+CGG | - | chr1.2:50472677-50472696 | None:intergenic | 30.0% | |
| GCTTCGAATATACAATGAAA+CGG | + | chr1.2:50475579-50475598 | MS.gene30891:CDS | 30.0% | |
| GCTTGTGTTTACTTTGATAT+TGG | + | chr1.2:50473929-50473948 | MS.gene30891:intron | 30.0% | |
| TAATCATAGTACTCCAGTAA+AGG | - | chr1.2:50474677-50474696 | None:intergenic | 30.0% | |
| TCTTTGATTAGAGTTCTCTT+GGG | + | chr1.2:50473577-50473596 | MS.gene30891:intron | 30.0% | |
| TGAAACATTGTAAACACCTT+GGG | + | chr1.2:50473603-50473622 | MS.gene30891:intron | 30.0% | |
| TTATCAAAGAGACTTGATGA+TGG | + | chr1.2:50474814-50474833 | MS.gene30891:CDS | 30.0% | |
| TTGATTCCTAGATTAGATCT+AGG | + | chr1.2:50473887-50473906 | MS.gene30891:intron | 30.0% | |
| TTTCATGTGTATCTGTATCT+TGG | + | chr1.2:50472418-50472437 | MS.gene30891:intron | 30.0% | |
| TTTCTATATGATTGCAGAGT+CGG | + | chr1.2:50475844-50475863 | MS.gene30891:intron | 30.0% | |
| TTTGACATACAATTTGTAGG+TGG | - | chr1.2:50475514-50475533 | None:intergenic | 30.0% | |
| ! | AAAACTTGATAGCTCATGTA+TGG | + | chr1.2:50473023-50473042 | MS.gene30891:intron | 30.0% |
| ! | AAGAAGAAGTTTTCAAACCT+GGG | - | chr1.2:50471918-50471937 | None:intergenic | 30.0% |
| ! | AGCTATCAAGTTTTCCAATT+AGG | - | chr1.2:50473017-50473036 | None:intergenic | 30.0% |
| ! | AGCTTTGACATACAATTTGT+AGG | - | chr1.2:50475517-50475536 | None:intergenic | 30.0% |
| ! | GATAATAAGGCACCTTATTT+AGG | + | chr1.2:50475070-50475089 | MS.gene30891:intron | 30.0% |
| ! | GCAAAGGACAATTTAGTTTA+CGG | - | chr1.2:50472638-50472657 | None:intergenic | 30.0% |
| ! | TATCAAAGAGACTTGATGAT+GGG | + | chr1.2:50474815-50474834 | MS.gene30891:CDS | 30.0% |
| ! | TCTTAATCTTGATGATTACG+AGG | + | chr1.2:50475959-50475978 | MS.gene30891:CDS | 30.0% |
| ! | TGTTCTTTGCAGATTTTGAA+GGG | + | chr1.2:50473488-50473507 | MS.gene30891:intron | 30.0% |
| ! | TTTAGGATGTTTACCCTAAT+TGG | - | chr1.2:50473147-50473166 | None:intergenic | 30.0% |
| ! | TTTCTAATTTTGCGTGTGAT+AGG | - | chr1.2:50472016-50472035 | None:intergenic | 30.0% |
| !! | ATGAACAAATTTTGCCGATT+TGG | + | chr1.2:50475048-50475067 | MS.gene30891:intron | 30.0% |
| !! | TGAATGATATTTGCTTTTGG+GGG | + | chr1.2:50472698-50472717 | MS.gene30891:intron | 30.0% |
| !!! | CAATGTGTATCCATTTTTTG+CGG | + | chr1.2:50475195-50475214 | MS.gene30891:intron | 30.0% |
| !!! | CCTTTCTTTTTTTTATGCTC+AGG | + | chr1.2:50475306-50475325 | MS.gene30891:intron | 30.0% |
| !!! | CTTTTGATTTTGAGCCAATT+AGG | + | chr1.2:50473130-50473149 | MS.gene30891:intron | 30.0% |
| !!! | TTTTGCCGATTTGGATAATA+AGG | + | chr1.2:50475057-50475076 | MS.gene30891:intron | 30.0% |
| !!! | TTTTTTTTGGAGCTTTGCTT+TGG | + | chr1.2:50472321-50472340 | MS.gene30891:intron | 30.0% |
| AAAACAAGGTCAATTGGTGT+CGG | + | chr1.2:50474771-50474790 | MS.gene30891:CDS | 35.0% | |
| AAAACCAAACTGTCCTCTAA+TGG | + | chr1.2:50473164-50473183 | MS.gene30891:intron | 35.0% | |
| AAAACTTGGGAAATCAAAGG+AGG | + | chr1.2:50473536-50473555 | MS.gene30891:intron | 35.0% | |
| AAAGATCAGCTGAGTGAAAA+TGG | + | chr1.2:50474579-50474598 | MS.gene30891:intron | 35.0% | |
| AAAGGGACAACTAATAGAAC+AGG | - | chr1.2:50474659-50474678 | None:intergenic | 35.0% | |
| AACTTCAAGAGAGGAAAACT+TGG | + | chr1.2:50473522-50473541 | MS.gene30891:intron | 35.0% | |
| AAGTGTATGTCACTCACTAT+AGG | + | chr1.2:50474921-50474940 | MS.gene30891:intron | 35.0% | |
| ACTTCAAGAGAGGAAAACTT+GGG | + | chr1.2:50473523-50473542 | MS.gene30891:intron | 35.0% | |
| AGGAAAACTTGGGAAATCAA+AGG | + | chr1.2:50473533-50473552 | MS.gene30891:intron | 35.0% | |
| AGTGTTCTTCATTGTAGTAG+TGG | + | chr1.2:50472524-50472543 | MS.gene30891:intron | 35.0% | |
| ATACCTCCCTAGATATCAAA+TGG | + | chr1.2:50473189-50473208 | MS.gene30891:intron | 35.0% | |
| ATCTAACTTAAACCTTGAGC+TGG | + | chr1.2:50474083-50474102 | MS.gene30891:intron | 35.0% | |
| ATGAACGAGTCGAAATTCAA+AGG | - | chr1.2:50471961-50471980 | None:intergenic | 35.0% | |
| ATGACAAATACGAGCTGATT+AGG | - | chr1.2:50475112-50475131 | None:intergenic | 35.0% | |
| ATGCCTTCAAATTGTGAAGT+TGG | + | chr1.2:50473230-50473249 | MS.gene30891:intron | 35.0% | |
| ATGCTCAGGAAATATTGGAA+GGG | + | chr1.2:50475320-50475339 | MS.gene30891:intron | 35.0% | |
| ATTATTGGAGTTTAACCTGC+CGG | + | chr1.2:50475899-50475918 | MS.gene30891:CDS | 35.0% | |
| ATTGGTGAGATTGGGAAAAT+GGG | + | chr1.2:50473654-50473673 | MS.gene30891:intron | 35.0% | |
| CCAATACAAACTATGATGTG+TGG | - | chr1.2:50473973-50473992 | None:intergenic | 35.0% | |
| CGAAGTTTAGAAAACATCAC+GGG | - | chr1.2:50475225-50475244 | None:intergenic | 35.0% | |
| CGACTTTGTAAGGATTACTT+AGG | + | chr1.2:50472976-50472995 | MS.gene30891:intron | 35.0% | |
| CGTTGCTTCTATTGACATTA+AGG | + | chr1.2:50475447-50475466 | MS.gene30891:CDS | 35.0% | |
| CTACTACAATGAAGAACACT+AGG | - | chr1.2:50472524-50472543 | None:intergenic | 35.0% | |
| CTTGATTGATGTTGGATTTG+TGG | + | chr1.2:50474335-50474354 | MS.gene30891:intron | 35.0% | |
| GAACTGGGATTTATTCTTGA+TGG | + | chr1.2:50474850-50474869 | MS.gene30891:CDS | 35.0% | |
| GGGAAAATGGGTAGAAATTA+GGG | + | chr1.2:50473666-50473685 | MS.gene30891:intron | 35.0% | |
| GTATAGCAACTACTACTTGT+TGG | + | chr1.2:50472467-50472486 | MS.gene30891:intron | 35.0% | |
| GTCTTTGATTAGAGTTCTCT+TGG | + | chr1.2:50473576-50473595 | MS.gene30891:intron | 35.0% | |
| GTGAAACATTGTAAACACCT+TGG | + | chr1.2:50473602-50473621 | MS.gene30891:intron | 35.0% | |
| TATGCTCAGGAAATATTGGA+AGG | + | chr1.2:50475319-50475338 | MS.gene30891:intron | 35.0% | |
| TCACGTGCGTTTATATAAGT+GGG | + | chr1.2:50472927-50472946 | MS.gene30891:intron | 35.0% | |
| TCTATTAGTTGTCCCTTTAC+TGG | + | chr1.2:50474661-50474680 | MS.gene30891:intron | 35.0% | |
| TCTCCAACTTCACAATTTGA+AGG | - | chr1.2:50473236-50473255 | None:intergenic | 35.0% | |
| TCTTGTTCATTGGTGAGATT+GGG | + | chr1.2:50473646-50473665 | MS.gene30891:intron | 35.0% | |
| TGGGAAAATGGGTAGAAATT+AGG | + | chr1.2:50473665-50473684 | MS.gene30891:intron | 35.0% | |
| TGTGTTCTCTTGATTGATGT+TGG | + | chr1.2:50474327-50474346 | MS.gene30891:intron | 35.0% | |
| TGTTCTTGTCATCTGTTAGT+CGG | + | chr1.2:50474211-50474230 | MS.gene30891:intron | 35.0% | |
| TTGTAAGAGCTCATTGATAG+TGG | + | chr1.2:50473742-50473761 | MS.gene30891:intron | 35.0% | |
| TTTATTAAGGAACGGAAAGC+CGG | - | chr1.2:50474286-50474305 | None:intergenic | 35.0% | |
| ! | AGGTGCCTTATTATCCAAAT+CGG | - | chr1.2:50475065-50475084 | None:intergenic | 35.0% |
| ! | CCACACATCATAGTTTGTAT+TGG | + | chr1.2:50473970-50473989 | MS.gene30891:intron | 35.0% |
| ! | GAAGAAGAAGTTTTCAAACC+TGG | - | chr1.2:50471919-50471938 | None:intergenic | 35.0% |
| ! | GTGTTCTTTGCAGATTTTGA+AGG | + | chr1.2:50473487-50473506 | MS.gene30891:intron | 35.0% |
| ! | GTGTTTCTGATGCACTAATT+TGG | + | chr1.2:50474112-50474131 | MS.gene30891:intron | 35.0% |
| ! | TAGGAGGAAGGTTTTCAATT+CGG | + | chr1.2:50473077-50473096 | MS.gene30891:intron | 35.0% |
| ! | TCATTGAGTGTCTTGTTCAT+TGG | + | chr1.2:50473636-50473655 | MS.gene30891:intron | 35.0% |
| ! | TGTCATTTATAGCACTTCAG+AGG | + | chr1.2:50475647-50475666 | MS.gene30891:intron | 35.0% |
| ! | TTAAGAGCATGTAGCAACTT+CGG | - | chr1.2:50475945-50475964 | None:intergenic | 35.0% |
| ! | TTAAGCTTAGTTCTCGTACA+CGG | + | chr1.2:50472083-50472102 | MS.gene30891:intron | 35.0% |
| ! | TTCTCAAGCAGTACATTTTC+TGG | - | chr1.2:50475382-50475401 | None:intergenic | 35.0% |
| ! | TTGAATTTCGACTCGTTCAT+TGG | + | chr1.2:50471961-50471980 | MS.gene30891:intron | 35.0% |
| ! | TTGATAGCTCATGTATGGTT+AGG | + | chr1.2:50473028-50473047 | MS.gene30891:intron | 35.0% |
| !! | ATCAAAGAGACTTGATGATG+GGG | + | chr1.2:50474816-50474835 | MS.gene30891:CDS | 35.0% |
| !! | GTCGTTTTGTGAGTGATTTT+TGG | + | chr1.2:50472496-50472515 | MS.gene30891:intron | 35.0% |
| !! | TTGACTTGGTTATCAATCTG+AGG | + | chr1.2:50475353-50475372 | MS.gene30891:CDS | 35.0% |
| !! | TTTGCTTTGGAAATCACTGT+AGG | + | chr1.2:50472334-50472353 | MS.gene30891:intron | 35.0% |
| !!! | TTAGAGGACAGTTTGGTTTT+AGG | - | chr1.2:50473164-50473183 | None:intergenic | 35.0% |
| AAACACTCATTTCCAGCTCA+AGG | - | chr1.2:50474098-50474117 | None:intergenic | 40.0% | |
| AACTATGATGTGTGGAGCAA+AGG | - | chr1.2:50473965-50473984 | None:intergenic | 40.0% | |
| AATCGAGACAATTTACCACC+AGG | + | chr1.2:50472825-50472844 | MS.gene30891:intron | 40.0% | |
| ACAGCACCTAGATCTAATCT+AGG | - | chr1.2:50473896-50473915 | None:intergenic | 40.0% | |
| ATGAATATGATACTCCGGCT+TGG | - | chr1.2:50472672-50472691 | None:intergenic | 40.0% | |
| ATGTCCATTAGAGGACAGTT+TGG | - | chr1.2:50473171-50473190 | None:intergenic | 40.0% | |
| ATTGACATTAAGGCCGAGAA+TGG | + | chr1.2:50475457-50475476 | MS.gene30891:CDS | 40.0% | |
| ATTGTCCTTTGCAGAGATAG+TGG | + | chr1.2:50472646-50472665 | MS.gene30891:intron | 40.0% | |
| CAAATACGAGCTGATTAGGT+AGG | - | chr1.2:50475108-50475127 | None:intergenic | 40.0% | |
| CAACTAGCATGTTGTGAGTT+CGG | - | chr1.2:50474009-50474028 | None:intergenic | 40.0% | |
| CAATTTGTAGGTGGAAGAAG+CGG | - | chr1.2:50475505-50475524 | None:intergenic | 40.0% | |
| CACCAAGGAGATTTGAAAGA+CGG | - | chr1.2:50471832-50471851 | None:intergenic | 40.0% | |
| CATTGGTGAGATTGGGAAAA+TGG | + | chr1.2:50473653-50473672 | MS.gene30891:intron | 40.0% | |
| CTCACAACATGCTAGTTGTT+TGG | + | chr1.2:50474011-50474030 | MS.gene30891:intron | 40.0% | |
| CTGAAGCAGTTGTCAAAGAA+AGG | + | chr1.2:50475557-50475576 | MS.gene30891:CDS | 40.0% | |
| CTTACTTAACTCCTGAACTC+TGG | + | chr1.2:50472243-50472262 | MS.gene30891:intron | 40.0% | |
| GTATCAAACGTGTCACGATT+TGG | + | chr1.2:50473422-50473441 | MS.gene30891:intron | 40.0% | |
| GTCACGTGCGTTTATATAAG+TGG | + | chr1.2:50472926-50472945 | MS.gene30891:intron | 40.0% | |
| TAGCCATTTGATATCTAGGG+AGG | - | chr1.2:50473195-50473214 | None:intergenic | 40.0% | |
| TATAAACGCACGTGACACTA+AGG | - | chr1.2:50472922-50472941 | None:intergenic | 40.0% | |
| TGAAATCCATGTGTTTAGCC+AGG | + | chr1.2:50473054-50473073 | MS.gene30891:intron | 40.0% | |
| TGCTCAGGAAATATTGGAAG+GGG | + | chr1.2:50475321-50475340 | MS.gene30891:intron | 40.0% | |
| TGTTAACCCTCAAGATCCTA+GGG | - | chr1.2:50472285-50472304 | None:intergenic | 40.0% | |
| TTATTGGAGTTTAACCTGCC+GGG | + | chr1.2:50475900-50475919 | MS.gene30891:CDS | 40.0% | |
| TTCTGCTCTCTGATGTGTAA+TGG | + | chr1.2:50474720-50474739 | MS.gene30891:intron | 40.0% | |
| TTGACATTAAGGCCGAGAAT+GGG | + | chr1.2:50475458-50475477 | MS.gene30891:CDS | 40.0% | |
| TTTCAAACCTGGGAAGAAAG+TGG | - | chr1.2:50471908-50471927 | None:intergenic | 40.0% | |
| ! | ACTGCTTGCTTTATTGTTCG+AGG | - | chr1.2:50474880-50474899 | None:intergenic | 40.0% |
| ! | AGGTTTTCAATTCGGTCATG+TGG | + | chr1.2:50473085-50473104 | MS.gene30891:intron | 40.0% |
| ! | CAAACGTGACACGATTTTGA+CGG | + | chr1.2:50473446-50473465 | MS.gene30891:intron | 40.0% |
| ! | CAATGATTTTCACTCACCCA+AGG | - | chr1.2:50473622-50473641 | None:intergenic | 40.0% |
| ! | CCAATAATTTTCCTCTGCTG+CGG | - | chr1.2:50475887-50475906 | None:intergenic | 40.0% |
| ! | CTCCCTTTATCTTTTGCTTG+TGG | + | chr1.2:50473848-50473867 | MS.gene30891:intron | 40.0% |
| ! | GGAAAACGTGACACGATTTT+CGG | + | chr1.2:50473350-50473369 | MS.gene30891:intron | 40.0% |
| ! | GGTTTTCAATTCGGTCATGT+GGG | + | chr1.2:50473086-50473105 | MS.gene30891:intron | 40.0% |
| ! | GTCTTGTTCATTGGTGAGAT+TGG | + | chr1.2:50473645-50473664 | MS.gene30891:intron | 40.0% |
| ! | TAAGCTTAGTTCTCGTACAC+GGG | + | chr1.2:50472084-50472103 | MS.gene30891:intron | 40.0% |
| ! | TCCATTCGTGTCACGATTTT+GGG | + | chr1.2:50473329-50473348 | MS.gene30891:intron | 40.0% |
| !! | AGAGCTCATTGATAGTGGAT+TGG | + | chr1.2:50473747-50473766 | MS.gene30891:intron | 40.0% |
| !! | GCAAGTTTTCAGGATAAGGT+TGG | + | chr1.2:50473381-50473400 | MS.gene30891:intron | 40.0% |
| !! | TTTGCAGATTTTGAAGGGTG+AGG | + | chr1.2:50473493-50473512 | MS.gene30891:intron | 40.0% |
| AATTCCAGGGATCCCATTCT+CGG | - | chr1.2:50475473-50475492 | None:intergenic | 45.0% | |
| ACATCAGAGAGCAGAAGAGT+TGG | - | chr1.2:50474716-50474735 | None:intergenic | 45.0% | |
| AGCCGTCTTTCAAATCTCCT+TGG | + | chr1.2:50471827-50471846 | MS.gene30891:CDS | 45.0% | |
| AGGAGAGAGAACTTCAAGAG+AGG | + | chr1.2:50473513-50473532 | MS.gene30891:intron | 45.0% | |
| AGGAGGATTTGCAATCAGTG+TGG | + | chr1.2:50475412-50475431 | MS.gene30891:CDS | 45.0% | |
| AGGATTTGCAATCAGTGTGG+GGG | + | chr1.2:50475415-50475434 | MS.gene30891:CDS | 45.0% | |
| ATCAGAAGAACAGTCACGTG+CGG | + | chr1.2:50471759-50471778 | MS.gene30891:CDS | 45.0% | |
| ATCCATGTGTTTAGCCAGGT+AGG | + | chr1.2:50473058-50473077 | MS.gene30891:intron | 45.0% | |
| ATTTGAAAGACGGCTAGCGT+AGG | - | chr1.2:50471822-50471841 | None:intergenic | 45.0% | |
| CAAGAGATGTTCACCCAGTT+CGG | - | chr1.2:50473810-50473829 | None:intergenic | 45.0% | |
| CACGCAAGGATGAATTGTTC+GGG | + | chr1.2:50472191-50472210 | MS.gene30891:intron | 45.0% | |
| CCACGCAAGGATGAATTGTT+CGG | + | chr1.2:50472190-50472209 | MS.gene30891:intron | 45.0% | |
| CCGCAGCAGAGGAAAATTAT+TGG | + | chr1.2:50475884-50475903 | MS.gene30891:CDS | 45.0% | |
| GAGGATTTGCAATCAGTGTG+GGG | + | chr1.2:50475414-50475433 | MS.gene30891:CDS | 45.0% | |
| GCTCTCTGATGTGTAATGGT+TGG | + | chr1.2:50474724-50474743 | MS.gene30891:intron | 45.0% | |
| GGAGGATTTGCAATCAGTGT+GGG | + | chr1.2:50475413-50475432 | MS.gene30891:CDS | 45.0% | |
| GGCAAGCCTGTTTAGCTAAT+TGG | + | chr1.2:50472890-50472909 | MS.gene30891:intron | 45.0% | |
| GTACTGCTTGAGAAATGCCT+TGG | + | chr1.2:50475388-50475407 | MS.gene30891:CDS | 45.0% | |
| GTGTTAACCCTCAAGATCCT+AGG | - | chr1.2:50472286-50472305 | None:intergenic | 45.0% | |
| GTTAACCCTCAAGATCCTAG+GGG | - | chr1.2:50472284-50472303 | None:intergenic | 45.0% | |
| TAAATTCCTGAGGTCTCACC+TGG | + | chr1.2:50475158-50475177 | MS.gene30891:intron | 45.0% | |
| TCCCAAAATCGTGACACGAA+TGG | - | chr1.2:50473333-50473352 | None:intergenic | 45.0% | |
| TCCTGAACTCTGGACTACTA+GGG | + | chr1.2:50472253-50472272 | MS.gene30891:intron | 45.0% | |
| TTCTTCTGATCTTCACCACG+TGG | - | chr1.2:50471749-50471768 | None:intergenic | 45.0% | |
| TTGAAAACCTTCCTCCTACC+TGG | - | chr1.2:50473075-50473094 | None:intergenic | 45.0% | |
| ! | GATAAGGTTGGTCGTACCTT+GGG | + | chr1.2:50473393-50473412 | MS.gene30891:intron | 45.0% |
| ! | GTCCATTCGTGTCACGATTT+TGG | + | chr1.2:50473328-50473347 | MS.gene30891:intron | 45.0% |
| ! | TAGCAAGCGTGTCACGATTT+TGG | + | chr1.2:50473278-50473297 | MS.gene30891:intron | 45.0% |
| ! | TAGGGAGGTATGTCCATTAG+AGG | - | chr1.2:50473180-50473199 | None:intergenic | 45.0% |
| !! | AAAGAGACTTGATGATGGGG+AGG | + | chr1.2:50474819-50474838 | MS.gene30891:CDS | 45.0% |
| !! | AGGAGGTAACTTTAGGGTTG+AGG | + | chr1.2:50473553-50473572 | MS.gene30891:intron | 45.0% |
| !! | CAAGATTCTGGAATTCCTCC+CGG | - | chr1.2:50475921-50475940 | None:intergenic | 45.0% |
| !! | CTGGGCAAGTTTTCAGGATA+AGG | + | chr1.2:50473377-50473396 | MS.gene30891:intron | 45.0% |
| !! | GGAGGTAACTTTAGGGTTGA+GGG | + | chr1.2:50473554-50473573 | MS.gene30891:intron | 45.0% |
| ACAAAGTCGGCACACGTGTA+AGG | - | chr1.2:50472965-50472984 | None:intergenic | 50.0% | |
| ACCACTTGAGCTCCATCACT+TGG | - | chr1.2:50472161-50472180 | None:intergenic | 50.0% | |
| AGCAACTTCGGCCAAGATTC+TGG | - | chr1.2:50475933-50475952 | None:intergenic | 50.0% | |
| ATCAATCTCTCCCCCAGAGT+AGG | + | chr1.2:50473774-50473793 | MS.gene30891:intron | 50.0% | |
| ATCACGAACGAGATCACCAG+TGG | - | chr1.2:50471867-50471886 | None:intergenic | 50.0% | |
| ATCTGGTCCACTTTCTTCCC+AGG | + | chr1.2:50471898-50471917 | MS.gene30891:CDS | 50.0% | |
| CACCCTGCAAAACATGCTCA+CGG | - | chr1.2:50473309-50473328 | None:intergenic | 50.0% | |
| CACGGGACAACCGCAAAAAA+TGG | - | chr1.2:50475208-50475227 | None:intergenic | 50.0% | |
| CATGTGTTTAGCCAGGTAGG+AGG | + | chr1.2:50473061-50473080 | MS.gene30891:intron | 50.0% | |
| CCGAACAATTCATCCTTGCG+TGG | - | chr1.2:50472193-50472212 | None:intergenic | 50.0% | |
| CGAACTGGGTGAACATCTCT+TGG | + | chr1.2:50473808-50473827 | MS.gene30891:intron | 50.0% | |
| CGGGAGGAATTCCAGAATCT+TGG | + | chr1.2:50475919-50475938 | MS.gene30891:CDS | 50.0% | |
| CGTGATGAGCTCTCTTCATC+TGG | + | chr1.2:50471881-50471900 | MS.gene30891:CDS | 50.0% | |
| CGTTTGATACGTACGACCCA+AGG | - | chr1.2:50473412-50473431 | None:intergenic | 50.0% | |
| CTCCTACCTGGCTAAACACA+TGG | - | chr1.2:50473063-50473082 | None:intergenic | 50.0% | |
| CTCCTGAACTCTGGACTACT+AGG | + | chr1.2:50472252-50472271 | MS.gene30891:intron | 50.0% | |
| CTTGGCCACTATCTCTGCAA+AGG | - | chr1.2:50472654-50472673 | None:intergenic | 50.0% | |
| GATTGCAAATCCTCCTGCCA+AGG | - | chr1.2:50475408-50475427 | None:intergenic | 50.0% | |
| GGTCCAACTTGACCTACTCT+GGG | - | chr1.2:50473789-50473808 | None:intergenic | 50.0% | |
| GTCCAACTTGACCTACTCTG+GGG | - | chr1.2:50473788-50473807 | None:intergenic | 50.0% | |
| TCCAACTTGACCTACTCTGG+GGG | - | chr1.2:50473787-50473806 | None:intergenic | 50.0% | |
| TGCTTGAGAAATGCCTTGGC+AGG | + | chr1.2:50475392-50475411 | MS.gene30891:CDS | 50.0% | |
| TGGGATCCCTGGAATTGTCA+TGG | + | chr1.2:50475477-50475496 | MS.gene30891:CDS | 50.0% | |
| TGGTTATTGAGCTCCACGCA+AGG | + | chr1.2:50472177-50472196 | MS.gene30891:intron | 50.0% | |
| TGTTTAGCCAGGTAGGAGGA+AGG | + | chr1.2:50473065-50473084 | MS.gene30891:intron | 50.0% | |
| TTGAGAAATGCCTTGGCAGG+AGG | + | chr1.2:50475395-50475414 | MS.gene30891:CDS | 50.0% | |
| ! | AGGGGTAGCTGACATTGACT+TGG | + | chr1.2:50475339-50475358 | MS.gene30891:CDS | 50.0% |
| ! | GGATAAGGTTGGTCGTACCT+TGG | + | chr1.2:50473392-50473411 | MS.gene30891:intron | 50.0% |
| ! | TCCAAGTGATGGAGCTCAAG+TGG | + | chr1.2:50472157-50472176 | MS.gene30891:intron | 50.0% |
| ! | TGCCGTGAGCATGTTTTGCA+GGG | + | chr1.2:50473304-50473323 | MS.gene30891:intron | 50.0% |
| !! | ACACGTGTGCCGACTTTGTA+AGG | + | chr1.2:50472966-50472985 | MS.gene30891:intron | 50.0% |
| !! | AGGTCAAGTTGGACCGAACT+GGG | + | chr1.2:50473794-50473813 | MS.gene30891:intron | 50.0% |
| !! | CTTGATGATGGGGAGGCTAA+AGG | + | chr1.2:50474826-50474845 | MS.gene30891:CDS | 50.0% |
| !! | GACACGATTTTCGGCTTGCT+GGG | + | chr1.2:50473359-50473378 | MS.gene30891:intron | 50.0% |
| !! | GAGCAGAAGAGTTGGTGCAA+TGG | - | chr1.2:50474708-50474727 | None:intergenic | 50.0% |
| !! | TAGGTCAAGTTGGACCGAAC+TGG | + | chr1.2:50473793-50473812 | MS.gene30891:intron | 50.0% |
| !! | TGACACGATTTTCGGCTTGC+TGG | + | chr1.2:50473358-50473377 | MS.gene30891:intron | 50.0% |
| AACAAGACGGAATGGCGCGT+GGG | - | chr1.2:50471723-50471742 | None:intergenic | 55.0% | |
| ACCCTCAAGATCCTAGGGGA+AGG | - | chr1.2:50472280-50472299 | None:intergenic | 55.0% | |
| AGAACACCAGGTGAGACCTC+AGG | - | chr1.2:50475167-50475186 | None:intergenic | 55.0% | |
| AGAAGAACAGTCACGTGCGG+TGG | + | chr1.2:50471762-50471781 | MS.gene30891:CDS | 55.0% | |
| AGATCACCAGTGGCGATGTG+AGG | - | chr1.2:50471857-50471876 | None:intergenic | 55.0% | |
| AGCGGAGCCATGACAATTCC+AGG | - | chr1.2:50475487-50475506 | None:intergenic | 55.0% | |
| ATGATTGCAGAGTCGGCCTG+TGG | + | chr1.2:50475851-50475870 | MS.gene30891:intron | 55.0% | |
| CACCACGTGGAGCAACAAGA+CGG | - | chr1.2:50471736-50471755 | None:intergenic | 55.0% | |
| CCCTCAAGATCCTAGGGGAA+GGG | - | chr1.2:50472279-50472298 | None:intergenic | 55.0% | |
| CCCTTCCCCTAGGATCTTGA+GGG | + | chr1.2:50472276-50472295 | MS.gene30891:intron | 55.0% | |
| CCTTCATCTCTTCCGTCGCA+AGG | + | chr1.2:50471672-50471691 | MS.gene30891:CDS | 55.0% | |
| CCTTGCGACGGAAGAGATGA+AGG | - | chr1.2:50471675-50471694 | None:intergenic | 55.0% | |
| CGGCACACGTGTAAGGTGAA+GGG | - | chr1.2:50472958-50472977 | None:intergenic | 55.0% | |
| CGGTCCAACTTGACCTACTC+TGG | - | chr1.2:50473790-50473809 | None:intergenic | 55.0% | |
| CGTGGAGCAACAAGACGGAA+TGG | - | chr1.2:50471731-50471750 | None:intergenic | 55.0% | |
| CTGCGGTAAAACTCCTCCAC+AGG | - | chr1.2:50475870-50475889 | None:intergenic | 55.0% | |
| GAAGAACAGTCACGTGCGGT+GGG | + | chr1.2:50471763-50471782 | MS.gene30891:CDS | 55.0% | |
| GCCCTAGTAGTCCAGAGTTC+AGG | - | chr1.2:50472257-50472276 | None:intergenic | 55.0% | |
| GCGGAGCCATGACAATTCCA+GGG | - | chr1.2:50475486-50475505 | None:intergenic | 55.0% | |
| GGGGAGGCTAAAGGTGAACT+GGG | + | chr1.2:50474835-50474854 | MS.gene30891:CDS | 55.0% | |
| TCCCCAATGCACGACAGGTT+GGG | + | chr1.2:50472869-50472888 | MS.gene30891:intron | 55.0% | |
| TCCCCCAGAGTAGGTCAAGT+TGG | + | chr1.2:50473783-50473802 | MS.gene30891:intron | 55.0% | |
| TCGGCACACGTGTAAGGTGA+AGG | - | chr1.2:50472959-50472978 | None:intergenic | 55.0% | |
| TGCCCAACCTGTCGTGCATT+GGG | - | chr1.2:50472874-50472893 | None:intergenic | 55.0% | |
| TGGCGATGTGAGGAACACCA+AGG | - | chr1.2:50471847-50471866 | None:intergenic | 55.0% | |
| TGGGGAGGCTAAAGGTGAAC+TGG | + | chr1.2:50474834-50474853 | MS.gene30891:CDS | 55.0% | |
| TTGCCCAACCTGTCGTGCAT+TGG | - | chr1.2:50472875-50472894 | None:intergenic | 55.0% | |
| TTGGAGTTTAACCTGCCGGG+AGG | + | chr1.2:50475903-50475922 | MS.gene30891:CDS | 55.0% | |
| ! | GAGGAGTTTTACCGCAGCAG+AGG | + | chr1.2:50475873-50475892 | MS.gene30891:CDS | 55.0% |
| ! | GTGCCGTGAGCATGTTTTGC+AGG | + | chr1.2:50473303-50473322 | MS.gene30891:intron | 55.0% |
| ! | TGCAGAGATAGTGGCCAAGC+CGG | + | chr1.2:50472655-50472674 | MS.gene30891:intron | 55.0% |
| ! | TTCCGTCTTGTTGCTCCACG+TGG | + | chr1.2:50471731-50471750 | MS.gene30891:CDS | 55.0% |
| !! | ATTCTGGAATTCCTCCCGGC+AGG | - | chr1.2:50475917-50475936 | None:intergenic | 55.0% |
| !!! | GGCTTGCTGGGCAAGTTTTC+AGG | + | chr1.2:50473371-50473390 | MS.gene30891:intron | 55.0% |
| AAGGCCGAGAATGGGATCCC+TGG | + | chr1.2:50475466-50475485 | MS.gene30891:CDS | 60.0% | |
| ACTACTAGGGCCCTTCCCCT+AGG | + | chr1.2:50472266-50472285 | MS.gene30891:intron | 60.0% | |
| ATTGCAGAGTCGGCCTGTGG+AGG | + | chr1.2:50475854-50475873 | MS.gene30891:intron | 60.0% | |
| CAACAAGACGGAATGGCGCG+TGG | - | chr1.2:50471724-50471743 | None:intergenic | 60.0% | |
| CAGTGTCCCCAATGCACGAC+AGG | + | chr1.2:50472864-50472883 | MS.gene30891:intron | 60.0% | |
| CTGTCGTGCATTGGGGACAC+TGG | - | chr1.2:50472866-50472885 | None:intergenic | 60.0% | |
| GCCCAACCTGTCGTGCATTG+GGG | - | chr1.2:50472873-50472892 | None:intergenic | 60.0% | |
| GCCCTTCCCCTAGGATCTTG+AGG | + | chr1.2:50472275-50472294 | MS.gene30891:intron | 60.0% | |
| GGGACACTGGCACGCACAAT+CGG | - | chr1.2:50472853-50472872 | None:intergenic | 60.0% | |
| GGTGTTCCTCACATCGCCAC+TGG | + | chr1.2:50471848-50471867 | MS.gene30891:CDS | 60.0% | |
| GTCCCCAATGCACGACAGGT+TGG | + | chr1.2:50472868-50472887 | MS.gene30891:intron | 60.0% | |
| TAGGTGCCTTTACCGACGCC+AGG | - | chr1.2:50471803-50471822 | None:intergenic | 60.0% | |
| TGGGTCTTCCTCGGTTGTCC+TGG | + | chr1.2:50471782-50471801 | MS.gene30891:CDS | 60.0% | |
| TTCCTCGGTTGTCCTGGCGT+CGG | + | chr1.2:50471788-50471807 | MS.gene30891:CDS | 60.0% | |
| !! | GGTTGTCCTGGCGTCGGTAA+AGG | + | chr1.2:50471794-50471813 | MS.gene30891:CDS | 60.0% |
| AGAGATGAAGGACGCGCGCG+TGG | - | chr1.2:50471663-50471682 | None:intergenic | 65.0% | |
| CACGTGCGGTGGGTCTTCCT+CGG | + | chr1.2:50471773-50471792 | MS.gene30891:CDS | 65.0% | |
| CGTGGAAAGGCGGGTCGTGA+AGG | - | chr1.2:50471645-50471664 | None:intergenic | 65.0% | |
| GGAGAGGTAGCGCCTTGCGA+CGG | - | chr1.2:50471687-50471706 | None:intergenic | 65.0% | |
| GGGAGTTGAGCTCGGAGGAG+AGG | - | chr1.2:50471703-50471722 | None:intergenic | 65.0% | |
| TACCGACGCCAGGACAACCG+AGG | - | chr1.2:50471793-50471812 | None:intergenic | 65.0% | |
| TGAAGGACGCGCGCGTGGAA+AGG | - | chr1.2:50471658-50471677 | None:intergenic | 65.0% | |
| TGGCGCGTGGGAGTTGAGCT+CGG | - | chr1.2:50471711-50471730 | None:intergenic | 65.0% | |
| ! | CACGCACAATCGGTGCCTGG+TGG | - | chr1.2:50472843-50472862 | None:intergenic | 65.0% |
| ! | TGGCACGCACAATCGGTGCC+TGG | - | chr1.2:50472846-50472865 | None:intergenic | 65.0% |
| AGGACGCGCGCGTGGAAAGG+CGG | - | chr1.2:50471655-50471674 | None:intergenic | 70.0% | |
| CGCGTGGGAGTTGAGCTCGG+AGG | - | chr1.2:50471708-50471727 | None:intergenic | 70.0% | |
| GGACGCGCGCGTGGAAAGGC+GGG | - | chr1.2:50471654-50471673 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 50471635 | 50476004 | 50471635 | ID=MS.gene30891 |
| chr1.2 | mRNA | 50471635 | 50476004 | 50471635 | ID=MS.gene30891.t1;Parent=MS.gene30891 |
| chr1.2 | exon | 50471635 | 50471919 | 50471635 | ID=MS.gene30891.t1.exon1;Parent=MS.gene30891.t1 |
| chr1.2 | CDS | 50471635 | 50471919 | 50471635 | ID=cds.MS.gene30891.t1;Parent=MS.gene30891.t1 |
| chr1.2 | exon | 50474757 | 50474897 | 50474757 | ID=MS.gene30891.t1.exon2;Parent=MS.gene30891.t1 |
| chr1.2 | CDS | 50474757 | 50474897 | 50474757 | ID=cds.MS.gene30891.t1;Parent=MS.gene30891.t1 |
| chr1.2 | exon | 50475328 | 50475600 | 50475328 | ID=MS.gene30891.t1.exon3;Parent=MS.gene30891.t1 |
| chr1.2 | CDS | 50475328 | 50475600 | 50475328 | ID=cds.MS.gene30891.t1;Parent=MS.gene30891.t1 |
| chr1.2 | exon | 50475861 | 50476004 | 50475861 | ID=MS.gene30891.t1.exon4;Parent=MS.gene30891.t1 |
| chr1.2 | CDS | 50475861 | 50476004 | 50475861 | ID=cds.MS.gene30891.t1;Parent=MS.gene30891.t1 |
| Gene Sequence |
| Protein sequence |
