Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30896.t1 | XP_013468255.1 | 97.4 | 908 | 24 | 0 | 1 | 908 | 1 | 908 | 0.00E+00 | 1756.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30896.t1 | Q09818 | 31.8 | 402 | 227 | 11 | 3 | 367 | 12 | 403 | 1.1e-47 | 193.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30896.t1 | A0A072VKG7 | 97.4 | 908 | 24 | 0 | 1 | 908 | 1 | 908 | 0.0e+00 | 1756.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052287 | MS.gene30896 | 0.811761 | 5.96E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30896.t1 | MTR_1g066970 | 97.357 | 908 | 24 | 0 | 1 | 908 | 1 | 908 | 0.0 | 1825 |
MS.gene30896.t1 | MTR_4g061180 | 66.019 | 309 | 98 | 5 | 1 | 304 | 1 | 307 | 1.36e-137 | 437 |
MS.gene30896.t1 | MTR_4g061180 | 37.127 | 369 | 197 | 16 | 565 | 908 | 673 | 1031 | 3.18e-45 | 177 |
MS.gene30896.t1 | MTR_2g093100 | 72.401 | 279 | 75 | 1 | 1 | 277 | 1 | 279 | 6.43e-136 | 432 |
MS.gene30896.t1 | MTR_2g093100 | 34.444 | 360 | 209 | 13 | 569 | 908 | 644 | 996 | 2.09e-36 | 149 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30896.t1 | AT5G60170 | 36.741 | 988 | 527 | 30 | 1 | 905 | 1 | 973 | 1.88e-160 | 496 |
MS.gene30896.t1 | AT5G60170 | 36.538 | 988 | 527 | 31 | 1 | 905 | 1 | 971 | 2.18e-157 | 488 |
MS.gene30896.t1 | AT3G45630 | 66.558 | 308 | 97 | 3 | 1 | 304 | 1 | 306 | 1.23e-137 | 436 |
MS.gene30896.t1 | AT3G45630 | 66.558 | 308 | 97 | 3 | 1 | 304 | 1 | 306 | 1.23e-137 | 436 |
MS.gene30896.t1 | AT2G28540 | 49.443 | 449 | 191 | 8 | 1 | 430 | 1 | 432 | 8.30e-134 | 422 |
MS.gene30896.t1 | AT2G28540 | 49.443 | 449 | 191 | 8 | 1 | 430 | 1 | 432 | 5.92e-133 | 422 |
MS.gene30896.t1 | AT5G62910 | 43.333 | 60 | 28 | 1 | 8 | 67 | 251 | 304 | 1.33e-11 | 67.4 |
MS.gene30896.t1 | AT5G62910 | 43.333 | 60 | 28 | 1 | 8 | 67 | 251 | 304 | 1.33e-11 | 67.4 |
MS.gene30896.t1 | AT3G48070 | 44.828 | 58 | 26 | 1 | 8 | 65 | 243 | 294 | 2.40e-11 | 66.6 |
MS.gene30896.t1 | AT3G48070 | 44.828 | 58 | 26 | 1 | 8 | 65 | 243 | 294 | 4.55e-11 | 65.9 |
MS.gene30896.t1 | AT1G74870 | 49.180 | 61 | 24 | 2 | 2 | 62 | 206 | 259 | 5.02e-11 | 65.1 |
MS.gene30896.t1 | AT3G48070 | 44.828 | 58 | 26 | 1 | 8 | 65 | 194 | 245 | 6.39e-11 | 65.1 |
Find 207 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCAACCTCGTGTACATAAT+TGG | 0.216432 | 1.2:+50380235 | MS.gene30896:CDS |
ACTTACATCTAAAGAACTTT+TGG | 0.233420 | 1.2:-50382145 | None:intergenic |
TTCATTTGCAGGGCTTGTTT+TGG | 0.243269 | 1.2:+50380885 | MS.gene30896:intron |
AACTCGACCGATTCCTCTTT+AGG | 0.255910 | 1.2:+50383175 | MS.gene30896:CDS |
CAGCAATCATTTGGGGTTGC+TGG | 0.261328 | 1.2:+50383736 | MS.gene30896:CDS |
TTTCAGATCATATTGGAAAT+AGG | 0.261331 | 1.2:+50385766 | MS.gene30896:CDS |
TGCTAATACTAATTCATCTT+TGG | 0.262626 | 1.2:-50381529 | None:intergenic |
GAAGTATTGAATAATGAAAT+AGG | 0.264396 | 1.2:+50385966 | MS.gene30896:CDS |
CTGATTTGCAGCAATCATTT+GGG | 0.265234 | 1.2:+50383728 | MS.gene30896:CDS |
AGACAGGCCACTGAAATAAT+TGG | 0.270957 | 1.2:-50385937 | None:intergenic |
AATAATTTGAATCGTCCTTC+AGG | 0.272128 | 1.2:+50382060 | MS.gene30896:CDS |
TAAATTATCGCTGCCTTTGC+CGG | 0.284152 | 1.2:-50383311 | None:intergenic |
ATTAGTTGTTCAGTCAATTC+AGG | 0.284421 | 1.2:-50386037 | None:intergenic |
GCTTCAGATGATGGCTTGAT+TGG | 0.295084 | 1.2:-50383375 | None:intergenic |
ATTCGTAACCAGAATCATTC+AGG | 0.298934 | 1.2:+50383409 | MS.gene30896:CDS |
ATTCAACCACACCAGCCTTT+TGG | 0.298993 | 1.2:+50383236 | MS.gene30896:CDS |
AAGCAGCCCCTGGCAGGGTT+TGG | 0.311969 | 1.2:-50382730 | None:intergenic |
AAGGCTTCCCTGAATGATTC+TGG | 0.318324 | 1.2:-50383417 | None:intergenic |
CGGTGCAAGCAGCCCCTGGC+AGG | 0.321354 | 1.2:-50382736 | None:intergenic |
CAGTTCAGTAGTAATATTCT+TGG | 0.321542 | 1.2:+50385882 | MS.gene30896:CDS |
CCAGATGCATAATTCCCTTT+AGG | 0.322792 | 1.2:-50383766 | None:intergenic |
TCAAGACTTTCAGATCATAT+TGG | 0.327796 | 1.2:+50385759 | MS.gene30896:CDS |
TTCTGTGAGTACAAGCTTCC+TGG | 0.329107 | 1.2:+50383000 | MS.gene30896:CDS |
TCTGATTTGCAGCAATCATT+TGG | 0.331891 | 1.2:+50383727 | MS.gene30896:CDS |
ACTCGACCGATTCCTCTTTA+GGG | 0.334806 | 1.2:+50383176 | MS.gene30896:CDS |
AGCAGCCCCTGGCAGGGTTT+GGG | 0.337581 | 1.2:-50382729 | None:intergenic |
TTGTAGCACCAATGATTTGT+AGG | 0.340037 | 1.2:-50382038 | None:intergenic |
GGCAGCTCCATTGCTTGAAC+CGG | 0.342584 | 1.2:-50382324 | None:intergenic |
TTCATCACGTGCTGGTAATC+TGG | 0.349908 | 1.2:+50382676 | MS.gene30896:CDS |
ACCTGGACTGATTATTGTCT+TGG | 0.354617 | 1.2:-50383666 | None:intergenic |
ATTTGATGGAAGTCTGTCTT+TGG | 0.355483 | 1.2:+50383870 | MS.gene30896:CDS |
AAGTATTGAATAATGAAATA+GGG | 0.358868 | 1.2:+50385967 | MS.gene30896:CDS |
AAGGTTTGCCCCAGGTTAAA+AGG | 0.359911 | 1.2:-50385657 | None:intergenic |
GTGCTATCGGATAAATTTGA+TGG | 0.365279 | 1.2:+50383856 | MS.gene30896:CDS |
AAACTCACTGGAAAATTTAG+AGG | 0.365826 | 1.2:-50383896 | None:intergenic |
GTTCTATAAGCATCACTTTG+AGG | 0.368135 | 1.2:-50385795 | None:intergenic |
ACTAGGGCAAGGTGTGTATC+TGG | 0.372035 | 1.2:+50382626 | MS.gene30896:intron |
GAATGCAGTTGTTCAGAAAA+TGG | 0.376217 | 1.2:-50385855 | None:intergenic |
TTCATATTTCACTCGGGATT+CGG | 0.378364 | 1.2:+50383132 | MS.gene30896:CDS |
GAACAGAGTTGTAATAGTTC+TGG | 0.383667 | 1.2:+50385384 | MS.gene30896:CDS |
TATAATGGAAATGGCTCATA+AGG | 0.385777 | 1.2:+50379948 | MS.gene30896:CDS |
TTCCTTCCATCTGATGATTT+AGG | 0.390471 | 1.2:-50380184 | None:intergenic |
TTGAACCGGATTCTTTAATC+TGG | 0.391628 | 1.2:-50382310 | None:intergenic |
GTGGCTGATGATACATGTTT+AGG | 0.393495 | 1.2:-50382111 | None:intergenic |
AAAGAGGAATCGGTCGAGTT+AGG | 0.394430 | 1.2:-50383172 | None:intergenic |
TCAGCAGCTTCCGTGGGCCT+TGG | 0.396088 | 1.2:+50382959 | MS.gene30896:intron |
TCCTCCACTATTCCCCTACT+AGG | 0.401309 | 1.2:-50385618 | None:intergenic |
GCGACTGAATTGAGGAAGTA+AGG | 0.414883 | 1.2:-50385676 | None:intergenic |
CTAACAAGGCAGTTTCAAAT+CGG | 0.419000 | 1.2:+50383050 | MS.gene30896:CDS |
CTATGGTATTTGACCCTAGT+AGG | 0.428418 | 1.2:+50385604 | MS.gene30896:CDS |
TGTATCAAGAATAGACCTTT+CGG | 0.429650 | 1.2:-50382756 | None:intergenic |
GAAGATGAACTAGTATCCTT+TGG | 0.429995 | 1.2:-50382656 | None:intergenic |
GCGCAAAGCAGGTGCTTTGA+AGG | 0.432491 | 1.2:-50383638 | None:intergenic |
TGCAGGAAGTGCTGTTGAAT+TGG | 0.437192 | 1.2:-50382345 | None:intergenic |
TCCATCTCTTCGGTACATAT+CGG | 0.437890 | 1.2:-50379472 | None:intergenic |
ACAATGCGTTCTTTGTCATA+AGG | 0.439574 | 1.2:-50380006 | None:intergenic |
CACAATTATATCTTCCCAAA+AGG | 0.441190 | 1.2:-50383251 | None:intergenic |
TTGGCATCATATAATGGAAA+TGG | 0.443228 | 1.2:+50379939 | MS.gene30896:CDS |
CACAGATCTGTGTATGGTGT+TGG | 0.443926 | 1.2:+50379920 | MS.gene30896:intron |
AGATTCAATAGTTAAGTTGT+TGG | 0.444149 | 1.2:+50383591 | MS.gene30896:CDS |
CAAATAACCAGTGGGGAAGT+TGG | 0.446372 | 1.2:+50385907 | MS.gene30896:CDS |
ATTGATTCCCAAACCCTGCC+AGG | 0.447448 | 1.2:+50382722 | MS.gene30896:CDS |
ATCAGTCAGGTCCATCTCTT+CGG | 0.447989 | 1.2:-50379482 | None:intergenic |
ACCAGTACCCTCACTCTTCA+CGG | 0.451024 | 1.2:-50383482 | None:intergenic |
TCGATATCTCGTACAGCAAC+GGG | 0.451883 | 1.2:+50380494 | MS.gene30896:CDS |
CACTTCCTGCAGCCAACTCT+TGG | 0.453295 | 1.2:+50382357 | MS.gene30896:CDS |
AAATTATCGCTGCCTTTGCC+GGG | 0.458700 | 1.2:-50383310 | None:intergenic |
TTGCTTGATGGGAAAGTGTA+TGG | 0.460876 | 1.2:-50383829 | None:intergenic |
GATACATGTTTAGGATCATC+TGG | 0.463183 | 1.2:-50382102 | None:intergenic |
TATGCATCTGGTGGTTGTAA+TGG | 0.463874 | 1.2:+50383778 | MS.gene30896:CDS |
CATGTGGTGCGGTGATCTCC+AGG | 0.463912 | 1.2:-50383018 | None:intergenic |
CGTGGGCCTTGGTCAAGAAA+AGG | 0.470197 | 1.2:+50382970 | MS.gene30896:CDS |
AAGAACCAGATTAAAGAATC+CGG | 0.476974 | 1.2:+50382305 | MS.gene30896:intron |
CTTTCGGTGCAAGCAGCCCC+TGG | 0.477164 | 1.2:-50382740 | None:intergenic |
CCTAAAGGGAATTATGCATC+TGG | 0.477224 | 1.2:+50383766 | MS.gene30896:CDS |
GGATGTGCATGGCTCATGTT+CGG | 0.485368 | 1.2:+50383072 | MS.gene30896:CDS |
ATGCAAATGCTTCCCTAAAG+AGG | 0.485653 | 1.2:-50383188 | None:intergenic |
CTCCATCTGTAAATATCAGC+AGG | 0.487534 | 1.2:+50385556 | MS.gene30896:CDS |
ATAATTTGAATCGTCCTTCA+GGG | 0.488053 | 1.2:+50382061 | MS.gene30896:CDS |
GTCTTTGGAACTAGATGCAT+GGG | 0.488988 | 1.2:+50383567 | MS.gene30896:CDS |
GCTTCAGATGCTGATCAGTC+AGG | 0.491128 | 1.2:-50379495 | None:intergenic |
AGGGAGTACTTTGGAAGGTA+TGG | 0.494301 | 1.2:+50380455 | MS.gene30896:CDS |
ATGCTTCCCTAAAGAGGAAT+CGG | 0.494776 | 1.2:-50383182 | None:intergenic |
GATAGCACAGAATTGCTTGA+TGG | 0.494873 | 1.2:-50383841 | None:intergenic |
CAAAGAACGCATTGTGGCAA+TGG | 0.497709 | 1.2:+50380014 | MS.gene30896:CDS |
TGACCCTAGTAGGGGAATAG+TGG | 0.500098 | 1.2:+50385614 | MS.gene30896:CDS |
TCAATACTTCAGACATAGAC+AGG | 0.502092 | 1.2:-50385953 | None:intergenic |
TGAAGGTACAGATACACTAT+TGG | 0.504841 | 1.2:-50382822 | None:intergenic |
TCTTCATTGCGACTGAATTG+AGG | 0.507830 | 1.2:-50385684 | None:intergenic |
TTGTCTGGCAAAGGAAAACC+TGG | 0.512658 | 1.2:-50383683 | None:intergenic |
ATCAAGCAATTCTGTGCTAT+CGG | 0.515337 | 1.2:+50383843 | MS.gene30896:CDS |
TCTGTAAATATCAGCAGGAT+AGG | 0.517263 | 1.2:+50385561 | MS.gene30896:CDS |
ATGCTTATAGAACTAATTCG+AGG | 0.518286 | 1.2:+50385805 | MS.gene30896:CDS |
TTGCTGGACATGATCCTAAA+GGG | 0.518964 | 1.2:+50383752 | MS.gene30896:CDS |
ATAAATCCATTACCAAGAGT+TGG | 0.523397 | 1.2:-50382369 | None:intergenic |
TAACAAGGCAGTTTCAAATC+GGG | 0.527922 | 1.2:+50383051 | MS.gene30896:CDS |
GCTCATGCTTCAAGTCCACC+TGG | 0.528672 | 1.2:+50385312 | MS.gene30896:CDS |
CATCTGAAGCCGTGCAAATG+TGG | 0.529368 | 1.2:+50379508 | MS.gene30896:CDS |
AATGATTCCAATTATTTCAG+TGG | 0.530132 | 1.2:+50385930 | MS.gene30896:CDS |
TCCGATATGTACCGAAGAGA+TGG | 0.530600 | 1.2:+50379471 | MS.gene30896:CDS |
CCTCCACTATTCCCCTACTA+GGG | 0.530781 | 1.2:-50385617 | None:intergenic |
AGTAGGGTCCTACAAATCAT+TGG | 0.533965 | 1.2:+50382030 | MS.gene30896:CDS |
AACTTATTCAGCAGCTTCCG+TGG | 0.534099 | 1.2:+50382952 | MS.gene30896:intron |
ATTATATCTTCCCAAAAGGC+TGG | 0.535132 | 1.2:-50383247 | None:intergenic |
ATCTTCCCAAAAGGCTGGTG+TGG | 0.535708 | 1.2:-50383242 | None:intergenic |
AAAGAATCCGGTTCAAGCAA+TGG | 0.536155 | 1.2:+50382317 | MS.gene30896:CDS |
AATCATTCCAACTTCCCCAC+TGG | 0.536419 | 1.2:-50385914 | None:intergenic |
ATCAAGCCATCATCTGAAGC+AGG | 0.536789 | 1.2:+50383378 | MS.gene30896:CDS |
AGTATTGAATAATGAAATAG+GGG | 0.537525 | 1.2:+50385968 | MS.gene30896:CDS |
AATTAGTATTAGCATTTGCA+AGG | 0.541684 | 1.2:+50381538 | MS.gene30896:CDS |
GTTGCTGGACATGATCCTAA+AGG | 0.542234 | 1.2:+50383751 | MS.gene30896:CDS |
ACCTCATAGCCACATTTGCA+CGG | 0.542997 | 1.2:-50379517 | None:intergenic |
ATGGTGTTGGCATCATATAA+TGG | 0.543359 | 1.2:+50379933 | MS.gene30896:CDS |
TATGGTATTTGACCCTAGTA+GGG | 0.545322 | 1.2:+50385605 | MS.gene30896:CDS |
TTCGTAACCAGAATCATTCA+GGG | 0.546044 | 1.2:+50383410 | MS.gene30896:CDS |
TGTCTTTGGAACTAGATGCA+TGG | 0.546869 | 1.2:+50383566 | MS.gene30896:CDS |
TTGATTCCCAAACCCTGCCA+GGG | 0.546915 | 1.2:+50382723 | MS.gene30896:CDS |
CAGGGGCTGCTTGCACCGAA+AGG | 0.546984 | 1.2:+50382741 | MS.gene30896:CDS |
GGTGCAAGCAGCCCCTGGCA+GGG | 0.547321 | 1.2:-50382735 | None:intergenic |
GTCGATATCTCGTACAGCAA+CGG | 0.548555 | 1.2:+50380493 | MS.gene30896:CDS |
TGTTGAGTTCAAGAATCCTA+TGG | 0.549167 | 1.2:+50385587 | MS.gene30896:CDS |
TTGAAGATTCATATTTCACT+CGG | 0.550404 | 1.2:+50383125 | MS.gene30896:CDS |
AGGTACAGATACACTATTGG+TGG | 0.551077 | 1.2:-50382819 | None:intergenic |
CATTACCAAGAGTTGGCTGC+AGG | 0.551503 | 1.2:-50382362 | None:intergenic |
GCAGCGATAATTTAGCCTCC+AGG | 0.551527 | 1.2:+50383320 | MS.gene30896:CDS |
CCATGCATGACAATACTTTG+TGG | 0.552172 | 1.2:-50380910 | None:intergenic |
TGATTTGCAGCAATCATTTG+GGG | 0.553932 | 1.2:+50383729 | MS.gene30896:CDS |
CTTCAACGTAGGGAGTACTT+TGG | 0.557460 | 1.2:+50380446 | MS.gene30896:CDS |
TCCAAGACAATAATCAGTCC+AGG | 0.558162 | 1.2:+50383665 | MS.gene30896:CDS |
GTACTTTGGAAGGTATGGAA+AGG | 0.558874 | 1.2:+50380460 | MS.gene30896:CDS |
GCAGGCAGGACAACGGCCCT+CGG | 0.559341 | 1.2:-50379977 | None:intergenic |
TCATAAGGTGAACGGCAGGC+AGG | 0.563242 | 1.2:-50379991 | None:intergenic |
AGCCTAAATCATCAGATGGA+AGG | 0.565652 | 1.2:+50380182 | MS.gene30896:CDS |
TCTTGGTTCAAATAACCAGT+GGG | 0.566345 | 1.2:+50385899 | MS.gene30896:CDS |
TGGTTCAGATGTTGATAACA+AGG | 0.567738 | 1.2:+50383501 | MS.gene30896:CDS |
GAGAAGACCGTGAAGAGTGA+GGG | 0.567760 | 1.2:+50383475 | MS.gene30896:CDS |
GTTTCAAATCGGGATGTGCA+TGG | 0.571822 | 1.2:+50383061 | MS.gene30896:CDS |
TTTGTCATAAGGTGAACGGC+AGG | 0.574302 | 1.2:-50379995 | None:intergenic |
TCTTCATCTGCAAGGTGAAG+AGG | 0.574669 | 1.2:-50380262 | None:intergenic |
AGTTCATCTTCATCACGTGC+TGG | 0.577681 | 1.2:+50382668 | MS.gene30896:CDS |
TTAAAGCCTAAATCATCAGA+TGG | 0.577945 | 1.2:+50380178 | MS.gene30896:CDS |
TTGAACAAACATCACATTGG+TGG | 0.578775 | 1.2:+50382848 | MS.gene30896:CDS |
AACTTGATATTCTCATAACT+AGG | 0.580208 | 1.2:-50386008 | None:intergenic |
CTACTAGGGTCAAATACCAT+AGG | 0.581897 | 1.2:-50385603 | None:intergenic |
TGAAGATTCATATTTCACTC+GGG | 0.583365 | 1.2:+50383126 | MS.gene30896:CDS |
TTAGGATCATCTGGTGGTGG+AGG | 0.584690 | 1.2:-50382093 | None:intergenic |
GTAGGGGAATAGTGGAGGAA+AGG | 0.584951 | 1.2:+50385622 | MS.gene30896:CDS |
ATAGCACAGAATTGCTTGAT+GGG | 0.586568 | 1.2:-50383840 | None:intergenic |
AACTCACATCTTCATCTGCA+AGG | 0.587859 | 1.2:-50380270 | None:intergenic |
AGAGAAGACCGTGAAGAGTG+AGG | 0.588042 | 1.2:+50383474 | MS.gene30896:CDS |
TGTTTAGGATCATCTGGTGG+TGG | 0.593160 | 1.2:-50382096 | None:intergenic |
ACAATGAGGTGAATAATGCC+TGG | 0.593440 | 1.2:-50383338 | None:intergenic |
GAGGAAGTAAGGTTTGCCCC+AGG | 0.593890 | 1.2:-50385665 | None:intergenic |
TACTAGAAGGTAGATCATTG+AGG | 0.594731 | 1.2:+50380791 | MS.gene30896:CDS |
CCACAAAGTATTGTCATGCA+TGG | 0.596103 | 1.2:+50380910 | MS.gene30896:CDS |
CCACCAGCTACTTCAACGTA+GGG | 0.597126 | 1.2:+50380436 | MS.gene30896:intron |
TGCTTGATGGGAAAGTGTAT+GGG | 0.597143 | 1.2:-50383828 | None:intergenic |
AAATGATTGCTGCAAATCAG+AGG | 0.597628 | 1.2:-50383725 | None:intergenic |
AGGAAGCTTGTACTCACAGA+AGG | 0.598102 | 1.2:-50382998 | None:intergenic |
GGTTCAGTAAAATATTCAGA+AGG | 0.600729 | 1.2:-50383436 | None:intergenic |
TGTTTGTATCTACATGATCA+TGG | 0.601158 | 1.2:+50381486 | MS.gene30896:CDS |
CTGCTGATATTTACAGATGG+AGG | 0.601283 | 1.2:-50385555 | None:intergenic |
GGTGCTTTGAAGGATGTGTA+TGG | 0.601951 | 1.2:-50383628 | None:intergenic |
ACTTATTCAGCAGCTTCCGT+GGG | 0.602554 | 1.2:+50382953 | MS.gene30896:intron |
TGTATCTGGCAGTCTTCCAA+AGG | 0.610994 | 1.2:+50382640 | MS.gene30896:CDS |
ACCGTGAAGAGTGAGGGTAC+TGG | 0.611276 | 1.2:+50383481 | MS.gene30896:CDS |
ATCCTGCTGATATTTACAGA+TGG | 0.611333 | 1.2:-50385558 | None:intergenic |
TGATGTTTGTTCAACTCTGA+AGG | 0.613376 | 1.2:-50382839 | None:intergenic |
CTTAGATTCTGAGCACAATG+AGG | 0.615109 | 1.2:-50383352 | None:intergenic |
TCCACCAGCTACTTCAACGT+AGG | 0.615567 | 1.2:+50380435 | MS.gene30896:intron |
CTCATGCTTCAAGTCCACCT+GGG | 0.617092 | 1.2:+50385313 | MS.gene30896:CDS |
CCCTAGTAGGGGAATAGTGG+AGG | 0.622353 | 1.2:+50385617 | MS.gene30896:CDS |
GTTCTTTGTCATAAGGTGAA+CGG | 0.623891 | 1.2:-50379999 | None:intergenic |
AACGTAGGGAGTACTTTGGA+AGG | 0.624800 | 1.2:+50380450 | MS.gene30896:CDS |
GGCTCATAAGGATGAAACCG+AGG | 0.625328 | 1.2:+50379960 | MS.gene30896:CDS |
AACTCACTGGAAAATTTAGA+GGG | 0.627206 | 1.2:-50383895 | None:intergenic |
CAATGGCAGCTAACTGTCGA+AGG | 0.628948 | 1.2:+50380031 | MS.gene30896:CDS |
AACAAGGTTTCTTCAGACGT+CGG | 0.630644 | 1.2:+50383517 | MS.gene30896:CDS |
TTCTTGGTTCAAATAACCAG+TGG | 0.634073 | 1.2:+50385898 | MS.gene30896:CDS |
GGAGGTAAAACACTCCCTGA+AGG | 0.636149 | 1.2:-50382075 | None:intergenic |
CTGTCTGACATTGCAAACCC+AGG | 0.638003 | 1.2:-50385330 | None:intergenic |
GATCAACAACAACCCGGCAA+AGG | 0.642337 | 1.2:+50383298 | MS.gene30896:CDS |
GACTGTGATCAACAACAACC+CGG | 0.643140 | 1.2:+50383292 | MS.gene30896:CDS |
AAACAGTCTCTATTGCTGCA+AGG | 0.648038 | 1.2:-50381468 | None:intergenic |
TTGTTAGTATTCAAATCATG+TGG | 0.654500 | 1.2:-50383034 | None:intergenic |
TGATTCCCAAACCCTGCCAG+GGG | 0.654633 | 1.2:+50382724 | MS.gene30896:CDS |
ACTCTCCCGCGAGAAAACCC+AGG | 0.659154 | 1.2:-50385360 | None:intergenic |
AAAGGGAATTATGCATCTGG+TGG | 0.660201 | 1.2:+50383769 | MS.gene30896:CDS |
GTGAACGGCAGGCAGGACAA+CGG | 0.664000 | 1.2:-50379984 | None:intergenic |
GCTCATAAGGATGAAACCGA+GGG | 0.665241 | 1.2:+50379961 | MS.gene30896:CDS |
TCTGACATTGCAAACCCAGG+TGG | 0.667610 | 1.2:-50385327 | None:intergenic |
ATGGTATTTGACCCTAGTAG+GGG | 0.670671 | 1.2:+50385606 | MS.gene30896:CDS |
GCCGTGCAAATGTGGCTATG+AGG | 0.674534 | 1.2:+50379516 | MS.gene30896:CDS |
ATGTCAGACAGAATACCACC+TGG | 0.679445 | 1.2:+50385342 | MS.gene30896:CDS |
ACATGATTTGAATACTAACA+AGG | 0.682637 | 1.2:+50383036 | MS.gene30896:CDS |
TCATGCATGGCTCAGAAATG+TGG | 0.685600 | 1.2:+50380923 | MS.gene30896:CDS |
GAGTTGAACAAACATCACAT+TGG | 0.697798 | 1.2:+50382845 | MS.gene30896:CDS |
CTTGGTTCAAATAACCAGTG+GGG | 0.702385 | 1.2:+50385900 | MS.gene30896:CDS |
ACAGATGGAGGAGCATACTG+TGG | 0.707322 | 1.2:-50385543 | None:intergenic |
TTATGACAAAGAACGCATTG+TGG | 0.713769 | 1.2:+50380008 | MS.gene30896:CDS |
GCAGTCCAATTATGTACACG+AGG | 0.715517 | 1.2:-50380240 | None:intergenic |
TGTCAGACAGAATACCACCT+GGG | 0.740545 | 1.2:+50385343 | MS.gene30896:CDS |
AGTATTCAAATCATGTGGTG+CGG | 0.743229 | 1.2:-50383029 | None:intergenic |
CTCCCGCGAGAAAACCCAGG+TGG | 0.744790 | 1.2:-50385357 | None:intergenic |
GTATTGAATAATGAAATAGG+GGG | 0.745932 | 1.2:+50385969 | MS.gene30896:CDS |
ATGAGGTGAATAATGCCTGG+AGG | 0.749776 | 1.2:-50383335 | None:intergenic |
ACATGTTTAGGATCATCTGG+TGG | 0.761344 | 1.2:-50382099 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTATAATATAAAAAACATT+TGG | + | chr1.2:50384682-50384701 | MS.gene30896:intron | 10.0% |
!! | TAAATAAAAAAAATGAGTTA+GGG | - | chr1.2:50381225-50381244 | None:intergenic | 10.0% |
!! | TTAAATAAAAAAAATGAGTT+AGG | - | chr1.2:50381226-50381245 | None:intergenic | 10.0% |
!!! | TTTTTTTTATTTAACTATAG+AGG | + | chr1.2:50381232-50381251 | MS.gene30896:intron | 10.0% |
!! | AAAAAAATAAAAAAACTCAC+TGG | - | chr1.2:50383911-50383930 | None:intergenic | 15.0% |
!! | AAATTTATCAATTGATCATT+TGG | + | chr1.2:50384707-50384726 | MS.gene30896:intron | 15.0% |
!!! | AAGTATTGAATAATGAAATA+GGG | + | chr1.2:50385967-50385986 | MS.gene30896:CDS | 15.0% |
!!! | ATATCAAGTAATCAATTTTT+AGG | + | chr1.2:50380084-50380103 | MS.gene30896:intron | 15.0% |
!!! | GATTTAATTTTCTTATCTTT+AGG | + | chr1.2:50380707-50380726 | MS.gene30896:intron | 15.0% |
!!! | TTCTACTATTTTGTTTTTTT+AGG | + | chr1.2:50382228-50382247 | MS.gene30896:intron | 15.0% |
!!! | TTCTGTTTTATTTTATTATG+TGG | + | chr1.2:50384435-50384454 | MS.gene30896:intron | 15.0% |
!!! | TTTTTTTACTTTTCTACTAT+AGG | + | chr1.2:50384738-50384757 | MS.gene30896:intron | 15.0% |
!! | AAAAACATGTTATCAATTGA+AGG | - | chr1.2:50380410-50380429 | None:intergenic | 20.0% |
!! | AAAACATGTTATCAATTGAA+GGG | - | chr1.2:50380409-50380428 | None:intergenic | 20.0% |
!! | AGAAAATAATGACATAAACA+AGG | - | chr1.2:50380624-50380643 | None:intergenic | 20.0% |
!! | ATAATGCATCTTTAATAAAG+CGG | + | chr1.2:50385078-50385097 | MS.gene30896:intron | 20.0% |
!! | ATTCAAAAGTTCAATCAAAA+TGG | - | chr1.2:50381598-50381617 | None:intergenic | 20.0% |
!! | ATTCTTGATACAAAAAAATC+AGG | + | chr1.2:50382767-50382786 | MS.gene30896:CDS | 20.0% |
!! | GAAAATAATGACATAAACAA+GGG | - | chr1.2:50380623-50380642 | None:intergenic | 20.0% |
!! | GATAATTTATATAGTATGTG+AGG | - | chr1.2:50381436-50381455 | None:intergenic | 20.0% |
!! | GTATATCTATAGTATTATTC+CGG | + | chr1.2:50381045-50381064 | MS.gene30896:intron | 20.0% |
!! | TAACAAAATTTGATGTTCAT+GGG | + | chr1.2:50384356-50384375 | MS.gene30896:intron | 20.0% |
!! | TACTATATAAATTATCTTGC+TGG | + | chr1.2:50381440-50381459 | MS.gene30896:intron | 20.0% |
!! | TTAAACTACACAAACTAATA+TGG | - | chr1.2:50380360-50380379 | None:intergenic | 20.0% |
!! | TTAACAAAATTTGATGTTCA+TGG | + | chr1.2:50384355-50384374 | MS.gene30896:intron | 20.0% |
!! | TTAAGATGAAAAAACCTATT+TGG | + | chr1.2:50379787-50379806 | MS.gene30896:intron | 20.0% |
!! | TTCTTGATACAAAAAAATCA+GGG | + | chr1.2:50382768-50382787 | MS.gene30896:CDS | 20.0% |
!!! | AGTATTGAATAATGAAATAG+GGG | + | chr1.2:50385968-50385987 | MS.gene30896:CDS | 20.0% |
!!! | GAAGTATTGAATAATGAAAT+AGG | + | chr1.2:50385966-50385985 | MS.gene30896:CDS | 20.0% |
!!! | GTAATGGATTTATGAATATT+TGG | + | chr1.2:50382379-50382398 | MS.gene30896:intron | 20.0% |
!!! | TATAGTTGCACTTTTTTAAT+AGG | - | chr1.2:50384668-50384687 | None:intergenic | 20.0% |
!!! | TATATCTAACATTTTGTCTT+TGG | + | chr1.2:50383552-50383571 | MS.gene30896:CDS | 20.0% |
!!! | TCAATTGATAACATGTTTTT+TGG | + | chr1.2:50380410-50380429 | MS.gene30896:intron | 20.0% |
!!! | TTTGGTAGTTCAAATTTTAA+TGG | + | chr1.2:50381676-50381695 | MS.gene30896:intron | 20.0% |
!!! | TTTGTTTTTTGTTTTTTGAG+AGG | + | chr1.2:50384261-50384280 | MS.gene30896:intron | 20.0% |
! | AAAACTGAAAAGATAACACA+GGG | + | chr1.2:50381132-50381151 | MS.gene30896:intron | 25.0% |
! | AACCATTCGAAAATATTTAG+AGG | + | chr1.2:50384902-50384921 | MS.gene30896:intron | 25.0% |
! | AACTTGATATTCTCATAACT+AGG | - | chr1.2:50386011-50386030 | None:intergenic | 25.0% |
! | AAGAACTCATAATATGTCTT+CGG | - | chr1.2:50379747-50379766 | None:intergenic | 25.0% |
! | AATGATTCCAATTATTTCAG+TGG | + | chr1.2:50385930-50385949 | MS.gene30896:CDS | 25.0% |
! | AATTAGTATTAGCATTTGCA+AGG | + | chr1.2:50381538-50381557 | MS.gene30896:CDS | 25.0% |
! | ACAAATATGTCAAACAAGTA+TGG | + | chr1.2:50381825-50381844 | MS.gene30896:intron | 25.0% |
! | ACATGATTTGAATACTAACA+AGG | + | chr1.2:50383036-50383055 | MS.gene30896:CDS | 25.0% |
! | ACTAAAAAAAATGCTAGAAG+TGG | - | chr1.2:50382579-50382598 | None:intergenic | 25.0% |
! | ATACTTGTTTGACATATTTG+TGG | - | chr1.2:50381826-50381845 | None:intergenic | 25.0% |
! | ATGATACACATGTAAGAAAA+TGG | - | chr1.2:50379595-50379614 | None:intergenic | 25.0% |
! | ATTAATGAACATTACTTCTG+TGG | + | chr1.2:50382168-50382187 | MS.gene30896:intron | 25.0% |
! | CAAATATGTCAAACAAGTAT+GGG | + | chr1.2:50381826-50381845 | MS.gene30896:intron | 25.0% |
! | CATTAATTTAGTGCTTCTAT+AGG | + | chr1.2:50384330-50384349 | MS.gene30896:intron | 25.0% |
! | GATGTCTTTATGAAGTTATT+TGG | + | chr1.2:50384483-50384502 | MS.gene30896:intron | 25.0% |
! | GTATTGAATAATGAAATAGG+GGG | + | chr1.2:50385969-50385988 | MS.gene30896:CDS | 25.0% |
! | GTGGTAAACTTATTTATTGT+GGG | + | chr1.2:50382187-50382206 | MS.gene30896:intron | 25.0% |
! | GTTCTATCAAAAACCATATT+TGG | - | chr1.2:50384942-50384961 | None:intergenic | 25.0% |
! | TAAAACTGAAAAGATAACAC+AGG | + | chr1.2:50381131-50381150 | MS.gene30896:intron | 25.0% |
! | TAATAGCTATGACATAATGT+TGG | + | chr1.2:50384301-50384320 | MS.gene30896:intron | 25.0% |
! | TACCAAATGAATACACAATA+TGG | - | chr1.2:50381663-50381682 | None:intergenic | 25.0% |
! | TACGTAAGGAAATAATTTAG+TGG | - | chr1.2:50381305-50381324 | None:intergenic | 25.0% |
! | TATCAATTGAAGGGATAAAA+TGG | - | chr1.2:50380400-50380419 | None:intergenic | 25.0% |
! | TATTATTCCGGAAATAATTC+TGG | + | chr1.2:50381057-50381076 | MS.gene30896:intron | 25.0% |
! | TCTACCTAATTATCATTTGA+AGG | + | chr1.2:50380643-50380662 | MS.gene30896:intron | 25.0% |
! | TCTTGATACAAAAAAATCAG+GGG | + | chr1.2:50382769-50382788 | MS.gene30896:CDS | 25.0% |
! | TGACATATTTGTGGAAATTA+TGG | - | chr1.2:50381817-50381836 | None:intergenic | 25.0% |
! | TGCTAATACTAATTCATCTT+TGG | - | chr1.2:50381532-50381551 | None:intergenic | 25.0% |
! | TGGATTAAACTTTGTAGAAT+GGG | + | chr1.2:50381023-50381042 | MS.gene30896:intron | 25.0% |
! | TGTGGTAAACTTATTTATTG+TGG | + | chr1.2:50382186-50382205 | MS.gene30896:intron | 25.0% |
! | TTATTCCTGTATATATGTTC+TGG | + | chr1.2:50384461-50384480 | MS.gene30896:intron | 25.0% |
! | TTGAAGATTCATATTTCACT+CGG | + | chr1.2:50383125-50383144 | MS.gene30896:CDS | 25.0% |
! | TTGTTAGTATTCAAATCATG+TGG | - | chr1.2:50383037-50383056 | None:intergenic | 25.0% |
! | TTTCAGATCATATTGGAAAT+AGG | + | chr1.2:50385766-50385785 | MS.gene30896:CDS | 25.0% |
!! | ACTTACATCTAAAGAACTTT+TGG | - | chr1.2:50382148-50382167 | None:intergenic | 25.0% |
!! | AGATTCAATAGTTAAGTTGT+TGG | + | chr1.2:50383591-50383610 | MS.gene30896:CDS | 25.0% |
!! | ATCTTCTTTGATTGTAGTTT+TGG | + | chr1.2:50381984-50382003 | MS.gene30896:intron | 25.0% |
!! | TGGATTTTTCCTTAAAAATC+CGG | + | chr1.2:50384127-50384146 | MS.gene30896:intron | 25.0% |
!! | TTTTGTCTTTTGTGTGTTAA+AGG | + | chr1.2:50382007-50382026 | MS.gene30896:intron | 25.0% |
!!! | AAGGATATACCATTTTGATT+GGG | + | chr1.2:50380815-50380834 | MS.gene30896:intron | 25.0% |
!!! | ACTTTTTGGTATATTGTACT+AGG | + | chr1.2:50382609-50382628 | MS.gene30896:intron | 25.0% |
!!! | CTTTTTGGTATATTGTACTA+GGG | + | chr1.2:50382610-50382629 | MS.gene30896:intron | 25.0% |
!!! | GTTCATTTTTTTGTACTAGA+AGG | + | chr1.2:50380778-50380797 | MS.gene30896:CDS | 25.0% |
!!! | TAAGGATATACCATTTTGAT+TGG | + | chr1.2:50380814-50380833 | MS.gene30896:intron | 25.0% |
AAACATATCATGATACACCA+AGG | - | chr1.2:50385137-50385156 | None:intergenic | 30.0% | |
AAACTCACTGGAAAATTTAG+AGG | - | chr1.2:50383899-50383918 | None:intergenic | 30.0% | |
AACATATCATGATACACCAA+GGG | - | chr1.2:50385136-50385155 | None:intergenic | 30.0% | |
AACTCACTGGAAAATTTAGA+GGG | - | chr1.2:50383898-50383917 | None:intergenic | 30.0% | |
AACTGCCATAAAAATATAGC+TGG | - | chr1.2:50382530-50382549 | None:intergenic | 30.0% | |
AAGAACCAGATTAAAGAATC+CGG | + | chr1.2:50382305-50382324 | MS.gene30896:intron | 30.0% | |
AAGTAACAACCCAATCAAAA+TGG | - | chr1.2:50380827-50380846 | None:intergenic | 30.0% | |
AAGTACTTCATCTTTGAGTA+TGG | + | chr1.2:50383975-50383994 | MS.gene30896:intron | 30.0% | |
AATAATTTGAATCGTCCTTC+AGG | + | chr1.2:50382060-50382079 | MS.gene30896:CDS | 30.0% | |
AATTAAGTAGCAGATTGCAT+GGG | - | chr1.2:50381354-50381373 | None:intergenic | 30.0% | |
AGACAAATAAAGAGGTCATA+CGG | - | chr1.2:50381886-50381905 | None:intergenic | 30.0% | |
AGATGAAAAAACCTATTTGG+TGG | + | chr1.2:50379790-50379809 | MS.gene30896:intron | 30.0% | |
AGGAAATAATTTAGTGGTTC+AGG | - | chr1.2:50381299-50381318 | None:intergenic | 30.0% | |
ATAAATCCATTACCAAGAGT+TGG | - | chr1.2:50382372-50382391 | None:intergenic | 30.0% | |
ATAATTTGAATCGTCCTTCA+GGG | + | chr1.2:50382061-50382080 | MS.gene30896:CDS | 30.0% | |
ATATTTAGAGGTCAATGAGT+TGG | + | chr1.2:50384914-50384933 | MS.gene30896:intron | 30.0% | |
ATCAACAATGTTGCAATCTT+TGG | + | chr1.2:50384517-50384536 | MS.gene30896:intron | 30.0% | |
ATCATGCATAACATAGTCTT+AGG | + | chr1.2:50381786-50381805 | MS.gene30896:intron | 30.0% | |
ATCATTTGAAGGTTGGAATT+TGG | + | chr1.2:50380654-50380673 | MS.gene30896:intron | 30.0% | |
ATGCTTATAGAACTAATTCG+AGG | + | chr1.2:50385805-50385824 | MS.gene30896:CDS | 30.0% | |
CACAATTATATCTTCCCAAA+AGG | - | chr1.2:50383254-50383273 | None:intergenic | 30.0% | |
CACTTAATTGATGGAGTAAA+TGG | + | chr1.2:50384181-50384200 | MS.gene30896:intron | 30.0% | |
CAGTTCAGTAGTAATATTCT+TGG | + | chr1.2:50385882-50385901 | MS.gene30896:CDS | 30.0% | |
CCAACCTTCAAATGATAATT+AGG | - | chr1.2:50380650-50380669 | None:intergenic | 30.0% | |
CCTAATTATCATTTGAAGGT+TGG | + | chr1.2:50380647-50380666 | MS.gene30896:intron | 30.0% | |
CTAATATAGACCATAGTAGT+AGG | + | chr1.2:50381408-50381427 | MS.gene30896:intron | 30.0% | |
CTACTACTATGGTCTATATT+AGG | - | chr1.2:50381410-50381429 | None:intergenic | 30.0% | |
CTGGATTAAACTTTGTAGAA+TGG | + | chr1.2:50381022-50381041 | MS.gene30896:intron | 30.0% | |
GACCATATTGTGTATTCATT+TGG | + | chr1.2:50381658-50381677 | MS.gene30896:intron | 30.0% | |
GATGAAAAAACCTATTTGGT+GGG | + | chr1.2:50379791-50379810 | MS.gene30896:intron | 30.0% | |
GGTTCAGTAAAATATTCAGA+AGG | - | chr1.2:50383439-50383458 | None:intergenic | 30.0% | |
GTTACTCATTAACACACATT+GGG | - | chr1.2:50383949-50383968 | None:intergenic | 30.0% | |
TAAGTGAACGAGAAAGATAA+AGG | - | chr1.2:50384167-50384186 | None:intergenic | 30.0% | |
TAATTAAGTAGCAGATTGCA+TGG | - | chr1.2:50381355-50381374 | None:intergenic | 30.0% | |
TCAAGACTTTCAGATCATAT+TGG | + | chr1.2:50385759-50385778 | MS.gene30896:CDS | 30.0% | |
TGAAAGCAATCAAACTTAAG+AGG | - | chr1.2:50381740-50381759 | None:intergenic | 30.0% | |
TGAAGATTCATATTTCACTC+GGG | + | chr1.2:50383126-50383145 | MS.gene30896:CDS | 30.0% | |
TGAGTCAATTGTTATCAATG+AGG | + | chr1.2:50382886-50382905 | MS.gene30896:intron | 30.0% | |
TGTAAGAAGAGTAGATCAAA+TGG | + | chr1.2:50384827-50384846 | MS.gene30896:intron | 30.0% | |
TGTATCAAGAATAGACCTTT+CGG | - | chr1.2:50382759-50382778 | None:intergenic | 30.0% | |
TGTTACTCATTAACACACAT+TGG | - | chr1.2:50383950-50383969 | None:intergenic | 30.0% | |
TGTTTGTATCTACATGATCA+TGG | + | chr1.2:50381486-50381505 | MS.gene30896:CDS | 30.0% | |
TTAAAGCCTAAATCATCAGA+TGG | + | chr1.2:50380178-50380197 | MS.gene30896:CDS | 30.0% | |
TTGATCTACTCTTCTTACAA+CGG | - | chr1.2:50384826-50384845 | None:intergenic | 30.0% | |
TTTCTCGTTCACTTAATTGA+TGG | + | chr1.2:50384172-50384191 | MS.gene30896:intron | 30.0% | |
! | AAAAGCAAGAAAAGCATAAC+AGG | + | chr1.2:50379864-50379883 | MS.gene30896:intron | 30.0% |
! | AATAGTACACCTTTTAACCT+GGG | + | chr1.2:50385648-50385667 | MS.gene30896:CDS | 30.0% |
! | AATATTTTACTGAACCCTTG+GGG | + | chr1.2:50383443-50383462 | MS.gene30896:CDS | 30.0% |
! | ATAGATTCTCCGGATTTTTA+AGG | - | chr1.2:50384139-50384158 | None:intergenic | 30.0% |
! | ATTCAAGGAATCATTTTGTC+TGG | - | chr1.2:50383701-50383720 | None:intergenic | 30.0% |
! | CTCTTGTAAATCTACGATTT+TGG | - | chr1.2:50381101-50381120 | None:intergenic | 30.0% |
! | GAATATTTTACTGAACCCTT+GGG | + | chr1.2:50383442-50383461 | MS.gene30896:CDS | 30.0% |
! | GACCTCTAAATATTTTCGAA+TGG | - | chr1.2:50384907-50384926 | None:intergenic | 30.0% |
! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr1.2:50384885-50384904 | None:intergenic | 30.0% |
! | TAAGTGTTTTCTTTCCAATC+AGG | + | chr1.2:50384002-50384021 | MS.gene30896:intron | 30.0% |
! | TATAATGGAAATGGCTCATA+AGG | + | chr1.2:50379948-50379967 | MS.gene30896:CDS | 30.0% |
! | TATGACCTCTTTATTTGTCT+TGG | + | chr1.2:50381886-50381905 | MS.gene30896:intron | 30.0% |
! | TCAATGTCTTTTTACTTCTC+TGG | + | chr1.2:50381706-50381725 | MS.gene30896:intron | 30.0% |
! | TGAATATTTTACTGAACCCT+TGG | + | chr1.2:50383441-50383460 | MS.gene30896:CDS | 30.0% |
! | TGGTTTTTGATAGAACACTA+TGG | + | chr1.2:50384946-50384965 | MS.gene30896:intron | 30.0% |
! | TTGGCATCATATAATGGAAA+TGG | + | chr1.2:50379939-50379958 | MS.gene30896:CDS | 30.0% |
! | TTTCGTGATTTTGTGATGAT+GGG | + | chr1.2:50380854-50380873 | MS.gene30896:intron | 30.0% |
! | TTTTCGAATGGTTTCTCTAA+TGG | - | chr1.2:50384895-50384914 | None:intergenic | 30.0% |
! | TTTTCGTGATTTTGTGATGA+TGG | + | chr1.2:50380853-50380872 | MS.gene30896:intron | 30.0% |
! | TTTTGTGTGTTAAAGGAGTA+GGG | + | chr1.2:50382014-50382033 | MS.gene30896:intron | 30.0% |
!! | CTTTTGGGAAGATATAATTG+TGG | + | chr1.2:50383252-50383271 | MS.gene30896:CDS | 30.0% |
!! | GAAGTGGATTTGTTATTTCA+TGG | - | chr1.2:50382563-50382582 | None:intergenic | 30.0% |
!! | GCTTTAAAACTAGCCAATTA+AGG | + | chr1.2:50384621-50384640 | MS.gene30896:intron | 30.0% |
!!! | CAAATCAGAGGTTTTATTCA+AGG | - | chr1.2:50383716-50383735 | None:intergenic | 30.0% |
!!! | GTTGCACTTTTTTAATAGGT+TGG | - | chr1.2:50384664-50384683 | None:intergenic | 30.0% |
!!! | TCGCATTAATTTGTTTTGCA+TGG | + | chr1.2:50382407-50382426 | MS.gene30896:intron | 30.0% |
AAACAAGTATGGGTATGTCA+TGG | + | chr1.2:50381836-50381855 | MS.gene30896:intron | 35.0% | |
AAAGGTGAGAATAGATTCTC+CGG | - | chr1.2:50384149-50384168 | None:intergenic | 35.0% | |
AAATAAAGAGGTCATACGGA+AGG | - | chr1.2:50381882-50381901 | None:intergenic | 35.0% | |
AAATGAGTAGTCCTACAAGT+CGG | - | chr1.2:50381186-50381205 | None:intergenic | 35.0% | |
AAGAAGAGTAGATCAAATGG+AGG | + | chr1.2:50384830-50384849 | MS.gene30896:intron | 35.0% | |
ACAATGCGTTCTTTGTCATA+AGG | - | chr1.2:50380009-50380028 | None:intergenic | 35.0% | |
ACATAGTAGCACAAAGATGT+AGG | - | chr1.2:50380996-50381015 | None:intergenic | 35.0% | |
ACTGGTACCAGAATTATTTC+CGG | - | chr1.2:50381067-50381086 | None:intergenic | 35.0% | |
AGTATTCAAATCATGTGGTG+CGG | - | chr1.2:50383032-50383051 | None:intergenic | 35.0% | |
ATAGCACAGAATTGCTTGAT+GGG | - | chr1.2:50383843-50383862 | None:intergenic | 35.0% | |
ATCAAGCAATTCTGTGCTAT+CGG | + | chr1.2:50383843-50383862 | MS.gene30896:CDS | 35.0% | |
ATCCAATTAATTGAGCAAGC+AGG | - | chr1.2:50384112-50384131 | None:intergenic | 35.0% | |
ATCCTGCTGATATTTACAGA+TGG | - | chr1.2:50385561-50385580 | None:intergenic | 35.0% | |
ATCCTGCTTGCTCAATTAAT+TGG | + | chr1.2:50384107-50384126 | MS.gene30896:intron | 35.0% | |
ATGAGTTAGGGTGAAGAAAA+AGG | - | chr1.2:50381213-50381232 | None:intergenic | 35.0% | |
ATGCATCTTTAATAAAGCGG+AGG | + | chr1.2:50385081-50385100 | MS.gene30896:intron | 35.0% | |
ATTATATCTTCCCAAAAGGC+TGG | - | chr1.2:50383250-50383269 | None:intergenic | 35.0% | |
ATTCGTAACCAGAATCATTC+AGG | + | chr1.2:50383409-50383428 | MS.gene30896:CDS | 35.0% | |
ATTTCCTTACGTACATCACT+AGG | + | chr1.2:50381312-50381331 | MS.gene30896:intron | 35.0% | |
ATTTGATGGAAGTCTGTCTT+TGG | + | chr1.2:50383870-50383889 | MS.gene30896:CDS | 35.0% | |
CTAACAAGGCAGTTTCAAAT+CGG | + | chr1.2:50383050-50383069 | MS.gene30896:CDS | 35.0% | |
GAAAATAGGCTTAGATGGTT+TGG | + | chr1.2:50384774-50384793 | MS.gene30896:intron | 35.0% | |
GAAATAATTCTGGTACCAGT+AGG | + | chr1.2:50381067-50381086 | MS.gene30896:intron | 35.0% | |
GAACAGAGTTGTAATAGTTC+TGG | + | chr1.2:50385384-50385403 | MS.gene30896:CDS | 35.0% | |
GAAGATGAACTAGTATCCTT+TGG | - | chr1.2:50382659-50382678 | None:intergenic | 35.0% | |
GAATGCAGTTGTTCAGAAAA+TGG | - | chr1.2:50385858-50385877 | None:intergenic | 35.0% | |
GACAATACAGAAAACCTGAT+TGG | - | chr1.2:50384019-50384038 | None:intergenic | 35.0% | |
GACATCCAGAACATATATAC+AGG | - | chr1.2:50384469-50384488 | None:intergenic | 35.0% | |
GACTATGTTATGCATGATGT+AGG | - | chr1.2:50381784-50381803 | None:intergenic | 35.0% | |
GAGTTGAACAAACATCACAT+TGG | + | chr1.2:50382845-50382864 | MS.gene30896:CDS | 35.0% | |
GCAATCCAAGACAAATAAAG+AGG | - | chr1.2:50381894-50381913 | None:intergenic | 35.0% | |
GTGCTATCGGATAAATTTGA+TGG | + | chr1.2:50383856-50383875 | MS.gene30896:CDS | 35.0% | |
GTTCTATAAGCATCACTTTG+AGG | - | chr1.2:50385798-50385817 | None:intergenic | 35.0% | |
GTTCTTTGTCATAAGGTGAA+CGG | - | chr1.2:50380002-50380021 | None:intergenic | 35.0% | |
TAACAAGGCAGTTTCAAATC+GGG | + | chr1.2:50383051-50383070 | MS.gene30896:CDS | 35.0% | |
TAATCTACCGTTGAATACTC+TGG | + | chr1.2:50379614-50379633 | MS.gene30896:intron | 35.0% | |
TACTAGAAGGTAGATCATTG+AGG | + | chr1.2:50380791-50380810 | MS.gene30896:CDS | 35.0% | |
TACTTCATCTTTGAGTATGG+TGG | + | chr1.2:50383978-50383997 | MS.gene30896:intron | 35.0% | |
TAGCATTTGCAAGGTATGAT+TGG | + | chr1.2:50381547-50381566 | MS.gene30896:intron | 35.0% | |
TATATTAGGATACAGCGGAA+AGG | - | chr1.2:50381396-50381415 | None:intergenic | 35.0% | |
TATGGTATTTGACCCTAGTA+GGG | + | chr1.2:50385605-50385624 | MS.gene30896:CDS | 35.0% | |
TCAATACTTCAGACATAGAC+AGG | - | chr1.2:50385956-50385975 | None:intergenic | 35.0% | |
TCTGTAAATATCAGCAGGAT+AGG | + | chr1.2:50385561-50385580 | MS.gene30896:CDS | 35.0% | |
TCTTGGTTCAAATAACCAGT+GGG | + | chr1.2:50385899-50385918 | MS.gene30896:CDS | 35.0% | |
TGAAACACATTCATTGTCGA+TGG | + | chr1.2:50384217-50384236 | MS.gene30896:intron | 35.0% | |
TGATGTTTGTTCAACTCTGA+AGG | - | chr1.2:50382842-50382861 | None:intergenic | 35.0% | |
TGGTAGAAAATAGGCTTAGA+TGG | + | chr1.2:50384769-50384788 | MS.gene30896:intron | 35.0% | |
TGGTCTATATTAGGATACAG+CGG | - | chr1.2:50381401-50381420 | None:intergenic | 35.0% | |
TGTTGAGTTCAAGAATCCTA+TGG | + | chr1.2:50385587-50385606 | MS.gene30896:CDS | 35.0% | |
TTATGACAAAGAACGCATTG+TGG | + | chr1.2:50380008-50380027 | MS.gene30896:CDS | 35.0% | |
TTCATATTTCACTCGGGATT+CGG | + | chr1.2:50383132-50383151 | MS.gene30896:CDS | 35.0% | |
TTCCTACTTGAACAACACTT+TGG | - | chr1.2:50380588-50380607 | None:intergenic | 35.0% | |
TTCCTTCCATCTGATGATTT+AGG | - | chr1.2:50380187-50380206 | None:intergenic | 35.0% | |
TTCGTAACCAGAATCATTCA+GGG | + | chr1.2:50383410-50383429 | MS.gene30896:CDS | 35.0% | |
TTCTACTATAGGTGCTAAGT+TGG | + | chr1.2:50384749-50384768 | MS.gene30896:intron | 35.0% | |
TTCTTGGTTCAAATAACCAG+TGG | + | chr1.2:50385898-50385917 | MS.gene30896:CDS | 35.0% | |
TTGAACAAACATCACATTGG+TGG | + | chr1.2:50382848-50382867 | MS.gene30896:CDS | 35.0% | |
TTGAACCGGATTCTTTAATC+TGG | - | chr1.2:50382313-50382332 | None:intergenic | 35.0% | |
TTTCCTCTGTCTTTCATTAG+TGG | + | chr1.2:50385284-50385303 | MS.gene30896:intron | 35.0% | |
! | AGTTCTGGTATAACTCTTCA+TGG | + | chr1.2:50385399-50385418 | MS.gene30896:intron | 35.0% |
! | ATAGTACACCTTTTAACCTG+GGG | + | chr1.2:50385649-50385668 | MS.gene30896:CDS | 35.0% |
! | ATATTTTACTGAACCCTTGG+GGG | + | chr1.2:50383444-50383463 | MS.gene30896:CDS | 35.0% |
! | CAATGAGTTGGATCCAAATA+TGG | + | chr1.2:50384926-50384945 | MS.gene30896:intron | 35.0% |
! | CATCAAACCAGAGTATTCAA+CGG | - | chr1.2:50379624-50379643 | None:intergenic | 35.0% |
! | CTGGTTCTTAATTGTCAAGA+TGG | - | chr1.2:50382294-50382313 | None:intergenic | 35.0% |
! | CTTGTAGGACTACTCATTTT+CGG | + | chr1.2:50381187-50381206 | MS.gene30896:intron | 35.0% |
! | CTTGTGAATGGAAAGTATGA+TGG | + | chr1.2:50384393-50384412 | MS.gene30896:intron | 35.0% |
! | CTTTTGTGTGTTAAAGGAGT+AGG | + | chr1.2:50382013-50382032 | MS.gene30896:intron | 35.0% |
! | GAATAGTACACCTTTTAACC+TGG | + | chr1.2:50385647-50385666 | MS.gene30896:CDS | 35.0% |
! | GATACATGTTTAGGATCATC+TGG | - | chr1.2:50382105-50382124 | None:intergenic | 35.0% |
! | GGAATTTGGAATTTGTTCCT+TGG | + | chr1.2:50380668-50380687 | MS.gene30896:intron | 35.0% |
! | TCTTTTCACAGATCTGTGTA+TGG | + | chr1.2:50379914-50379933 | MS.gene30896:intron | 35.0% |
! | TCTTTTTACTTCTCTGGTGT+TGG | + | chr1.2:50381712-50381731 | MS.gene30896:intron | 35.0% |
! | TGAAGGTACAGATACACTAT+TGG | - | chr1.2:50382825-50382844 | None:intergenic | 35.0% |
! | TGAGAGTATGTCTAACTAGA+AGG | - | chr1.2:50381925-50381944 | None:intergenic | 35.0% |
! | TGTGCTACTATGTTAGAAAC+TGG | + | chr1.2:50381003-50381022 | MS.gene30896:intron | 35.0% |
! | TTCTGTCATTTGCTTGTGAA+TGG | + | chr1.2:50384381-50384400 | MS.gene30896:intron | 35.0% |
! | TTGTAGCACCAATGATTTGT+AGG | - | chr1.2:50382041-50382060 | None:intergenic | 35.0% |
!! | ATAGTAGAAGTTTTGTCCCT+TGG | + | chr1.2:50385117-50385136 | MS.gene30896:intron | 35.0% |
!! | ATGGTGTTGGCATCATATAA+TGG | + | chr1.2:50379933-50379952 | MS.gene30896:CDS | 35.0% |
!! | CGTCACCAGCTATATTTTTA+TGG | + | chr1.2:50382522-50382541 | MS.gene30896:intron | 35.0% |
!! | GGTGGTTATTTTCATTTGCA+GGG | + | chr1.2:50380875-50380894 | MS.gene30896:intron | 35.0% |
!! | GTGCATGAACTTTAGCTTTA+CGG | + | chr1.2:50384576-50384595 | MS.gene30896:intron | 35.0% |
!! | GTGCTAAGTTGGTAGAAAAT+AGG | + | chr1.2:50384760-50384779 | MS.gene30896:intron | 35.0% |
!! | GTGGATTTGTTATTTCATGG+TGG | - | chr1.2:50382560-50382579 | None:intergenic | 35.0% |
!! | TGGTTCAGATGTTGATAACA+AGG | + | chr1.2:50383501-50383520 | MS.gene30896:CDS | 35.0% |
!!! | ATTTGTTTTGCATGGCAGTA+CGG | + | chr1.2:50382415-50382434 | MS.gene30896:intron | 35.0% |
AAACAGTCTCTATTGCTGCA+AGG | - | chr1.2:50381471-50381490 | None:intergenic | 40.0% | |
AAAGAATCCGGTTCAAGCAA+TGG | + | chr1.2:50382317-50382336 | MS.gene30896:CDS | 40.0% | |
AAAGGGAATTATGCATCTGG+TGG | + | chr1.2:50383769-50383788 | MS.gene30896:CDS | 40.0% | |
AACAAGGTTTCTTCAGACGT+CGG | + | chr1.2:50383517-50383536 | MS.gene30896:CDS | 40.0% | |
AACTCACATCTTCATCTGCA+AGG | - | chr1.2:50380273-50380292 | None:intergenic | 40.0% | |
AACTGTCGAAGGTTGAGTTA+TGG | + | chr1.2:50380042-50380061 | MS.gene30896:intron | 40.0% | |
ACAAAAGCAACCCACCAAAT+AGG | - | chr1.2:50379804-50379823 | None:intergenic | 40.0% | |
ACAACACAAAAAGGGAATCC+AGG | - | chr1.2:50381274-50381293 | None:intergenic | 40.0% | |
ACAATGAGGTGAATAATGCC+TGG | - | chr1.2:50383341-50383360 | None:intergenic | 40.0% | |
ACCTGGACTGATTATTGTCT+TGG | - | chr1.2:50383669-50383688 | None:intergenic | 40.0% | |
ACTTGATATGTCACAGACAC+AGG | - | chr1.2:50385188-50385207 | None:intergenic | 40.0% | |
AGACAGGCCACTGAAATAAT+TGG | - | chr1.2:50385940-50385959 | None:intergenic | 40.0% | |
AGCCTAAATCATCAGATGGA+AGG | + | chr1.2:50380182-50380201 | MS.gene30896:CDS | 40.0% | |
AGGTACAGATACACTATTGG+TGG | - | chr1.2:50382822-50382841 | None:intergenic | 40.0% | |
AGTAGGGTCCTACAAATCAT+TGG | + | chr1.2:50382030-50382049 | MS.gene30896:CDS | 40.0% | |
AGTCAGGTTAAAAGAGGTAG+AGG | + | chr1.2:50384855-50384874 | MS.gene30896:intron | 40.0% | |
ATAAAGCGGAGGTTCTTAGT+TGG | + | chr1.2:50385092-50385111 | MS.gene30896:intron | 40.0% | |
ATACAGCGGAAAGGAAAACA+GGG | - | chr1.2:50381387-50381406 | None:intergenic | 40.0% | |
ATGCAAATGCTTCCCTAAAG+AGG | - | chr1.2:50383191-50383210 | None:intergenic | 40.0% | |
ATGCTTCCCTAAAGAGGAAT+CGG | - | chr1.2:50383185-50383204 | None:intergenic | 40.0% | |
ATGGTATTTGACCCTAGTAG+GGG | + | chr1.2:50385606-50385625 | MS.gene30896:CDS | 40.0% | |
ATGTGAGGAACCTACTACTA+TGG | - | chr1.2:50381421-50381440 | None:intergenic | 40.0% | |
CCAGATGCATAATTCCCTTT+AGG | - | chr1.2:50383769-50383788 | None:intergenic | 40.0% | |
CCATGCATGACAATACTTTG+TGG | - | chr1.2:50380913-50380932 | None:intergenic | 40.0% | |
CCTAAAGGGAATTATGCATC+TGG | + | chr1.2:50383766-50383785 | MS.gene30896:CDS | 40.0% | |
CTACTAGGGTCAAATACCAT+AGG | - | chr1.2:50385606-50385625 | None:intergenic | 40.0% | |
CTATGGTATTTGACCCTAGT+AGG | + | chr1.2:50385604-50385623 | MS.gene30896:CDS | 40.0% | |
CTCCATCTGTAAATATCAGC+AGG | + | chr1.2:50385556-50385575 | MS.gene30896:CDS | 40.0% | |
CTGCTGATATTTACAGATGG+AGG | - | chr1.2:50385558-50385577 | None:intergenic | 40.0% | |
CTTAGATTCTGAGCACAATG+AGG | - | chr1.2:50383355-50383374 | None:intergenic | 40.0% | |
CTTGGTTCAAATAACCAGTG+GGG | + | chr1.2:50385900-50385919 | MS.gene30896:CDS | 40.0% | |
GAAGGTAGATCATTGAGGTA+AGG | + | chr1.2:50380796-50380815 | MS.gene30896:intron | 40.0% | |
GATAGCACAGAATTGCTTGA+TGG | - | chr1.2:50383844-50383863 | None:intergenic | 40.0% | |
GTACAGTTGAGGTCCTTAAT+TGG | - | chr1.2:50384637-50384656 | None:intergenic | 40.0% | |
GTGGCTGATGATACATGTTT+AGG | - | chr1.2:50382114-50382133 | None:intergenic | 40.0% | |
GTTACTGTGACGAAACTTTC+TGG | + | chr1.2:50382908-50382927 | MS.gene30896:intron | 40.0% | |
TAAATTATCGCTGCCTTTGC+CGG | - | chr1.2:50383314-50383333 | None:intergenic | 40.0% | |
TATGCATCTGGTGGTTGTAA+TGG | + | chr1.2:50383778-50383797 | MS.gene30896:CDS | 40.0% | |
TCCAAGACAATAATCAGTCC+AGG | + | chr1.2:50383665-50383684 | MS.gene30896:CDS | 40.0% | |
TCCATCTCTTCGGTACATAT+CGG | - | chr1.2:50379475-50379494 | None:intergenic | 40.0% | |
TCTTCATTGCGACTGAATTG+AGG | - | chr1.2:50385687-50385706 | None:intergenic | 40.0% | |
TCTTCTTACAACGGCATCTA+CGG | - | chr1.2:50384817-50384836 | None:intergenic | 40.0% | |
TGGTATATTGTACTAGGGCA+AGG | + | chr1.2:50382615-50382634 | MS.gene30896:intron | 40.0% | |
TGTTGCTAGATGTAACTGTG+TGG | + | chr1.2:50380317-50380336 | MS.gene30896:intron | 40.0% | |
TTCAGGCGACAACACAAAAA+GGG | - | chr1.2:50381282-50381301 | None:intergenic | 40.0% | |
TTGCCACTAATGAAAGACAG+AGG | - | chr1.2:50385290-50385309 | None:intergenic | 40.0% | |
TTGCTGGACATGATCCTAAA+GGG | + | chr1.2:50383752-50383771 | MS.gene30896:CDS | 40.0% | |
! | ACATGTTTAGGATCATCTGG+TGG | - | chr1.2:50382102-50382121 | None:intergenic | 40.0% |
! | AGAACTTTTGGACACTGCTT+TGG | - | chr1.2:50382136-50382155 | None:intergenic | 40.0% |
! | GATTTTCCTGCTTCAGATGA+TGG | - | chr1.2:50383387-50383406 | None:intergenic | 40.0% |
! | GGAATCATTTTGTCTGGCAA+AGG | - | chr1.2:50383695-50383714 | None:intergenic | 40.0% |
! | GTACTTTGGAAGGTATGGAA+AGG | + | chr1.2:50380460-50380479 | MS.gene30896:CDS | 40.0% |
! | TCATGATGCCAGTTTTCTTG+TGG | + | chr1.2:50384083-50384102 | MS.gene30896:intron | 40.0% |
! | TGCTTGATGGGAAAGTGTAT+GGG | - | chr1.2:50383831-50383850 | None:intergenic | 40.0% |
! | TTGCTTGATGGGAAAGTGTA+TGG | - | chr1.2:50383832-50383851 | None:intergenic | 40.0% |
!! | CACCAAAGTGTTGTTCAAGT+AGG | + | chr1.2:50380583-50380602 | MS.gene30896:intron | 40.0% |
!! | CCACAAAGTATTGTCATGCA+TGG | + | chr1.2:50380910-50380929 | MS.gene30896:CDS | 40.0% |
!! | GGGTGGTTATTTTCATTTGC+AGG | + | chr1.2:50380874-50380893 | MS.gene30896:intron | 40.0% |
!! | GTCTTTGGAACTAGATGCAT+GGG | + | chr1.2:50383567-50383586 | MS.gene30896:CDS | 40.0% |
!! | TGTCTTTGGAACTAGATGCA+TGG | + | chr1.2:50383566-50383585 | MS.gene30896:CDS | 40.0% |
!! | TTCATTTGCAGGGCTTGTTT+TGG | + | chr1.2:50380885-50380904 | MS.gene30896:intron | 40.0% |
!!! | TAGTGTGAACGCTGACTTTT+TGG | + | chr1.2:50382595-50382614 | MS.gene30896:intron | 40.0% |
AAAGAGGAATCGGTCGAGTT+AGG | - | chr1.2:50383175-50383194 | None:intergenic | 45.0% | |
AAAGAGGTCATACGGAAGGA+AGG | - | chr1.2:50381878-50381897 | None:intergenic | 45.0% | |
AAATTATCGCTGCCTTTGCC+GGG | - | chr1.2:50383313-50383332 | None:intergenic | 45.0% | |
AACTTATTCAGCAGCTTCCG+TGG | + | chr1.2:50382952-50382971 | MS.gene30896:intron | 45.0% | |
AAGGCTTCCCTGAATGATTC+TGG | - | chr1.2:50383420-50383439 | None:intergenic | 45.0% | |
AAGGTTTGCCCCAGGTTAAA+AGG | - | chr1.2:50385660-50385679 | None:intergenic | 45.0% | |
AAGTCGGTAAAGCAGAGTGA+AGG | - | chr1.2:50381170-50381189 | None:intergenic | 45.0% | |
AATCATTCCAACTTCCCCAC+TGG | - | chr1.2:50385917-50385936 | None:intergenic | 45.0% | |
ACAAAAAGGGAATCCAGGCT+GGG | - | chr1.2:50381269-50381288 | None:intergenic | 45.0% | |
ACCTCATAGCCACATTTGCA+CGG | - | chr1.2:50379520-50379539 | None:intergenic | 45.0% | |
ACTTATTCAGCAGCTTCCGT+GGG | + | chr1.2:50382953-50382972 | MS.gene30896:intron | 45.0% | |
AGATCAAATGGAGGAGAGTC+AGG | + | chr1.2:50384839-50384858 | MS.gene30896:intron | 45.0% | |
AGGAAGCTTGTACTCACAGA+AGG | - | chr1.2:50383001-50383020 | None:intergenic | 45.0% | |
AGTCGGTAAAGCAGAGTGAA+GGG | - | chr1.2:50381169-50381188 | None:intergenic | 45.0% | |
AGTTCATCTTCATCACGTGC+TGG | + | chr1.2:50382668-50382687 | MS.gene30896:CDS | 45.0% | |
ATCAGTCAGGTCCATCTCTT+CGG | - | chr1.2:50379485-50379504 | None:intergenic | 45.0% | |
ATGAGGTGAATAATGCCTGG+AGG | - | chr1.2:50383338-50383357 | None:intergenic | 45.0% | |
ATGTCAGACAGAATACCACC+TGG | + | chr1.2:50385342-50385361 | MS.gene30896:CDS | 45.0% | |
CAAAGAACGCATTGTGGCAA+TGG | + | chr1.2:50380014-50380033 | MS.gene30896:CDS | 45.0% | |
CAAATAACCAGTGGGGAAGT+TGG | + | chr1.2:50385907-50385926 | MS.gene30896:CDS | 45.0% | |
CAACGAATGCAAAACAGCCA+AGG | - | chr1.2:50380688-50380707 | None:intergenic | 45.0% | |
CACAGATCTGTGTATGGTGT+TGG | + | chr1.2:50379920-50379939 | MS.gene30896:intron | 45.0% | |
CGCAACCTCGTGTACATAAT+TGG | + | chr1.2:50380235-50380254 | MS.gene30896:CDS | 45.0% | |
CTTCTTACAACGGCATCTAC+GGG | - | chr1.2:50384816-50384835 | None:intergenic | 45.0% | |
CTTGCCTTGCTTTAGCAGAT+TGG | + | chr1.2:50380120-50380139 | MS.gene30896:intron | 45.0% | |
GACTGTGATCAACAACAACC+CGG | + | chr1.2:50383292-50383311 | MS.gene30896:CDS | 45.0% | |
GAGGAGAGTCAGGTTAAAAG+AGG | + | chr1.2:50384849-50384868 | MS.gene30896:intron | 45.0% | |
GATACAGCGGAAAGGAAAAC+AGG | - | chr1.2:50381388-50381407 | None:intergenic | 45.0% | |
GCAACCAATCTGCTAAAGCA+AGG | - | chr1.2:50380127-50380146 | None:intergenic | 45.0% | |
GCAGTCCAATTATGTACACG+AGG | - | chr1.2:50380243-50380262 | None:intergenic | 45.0% | |
GCGACTGAATTGAGGAAGTA+AGG | - | chr1.2:50385679-50385698 | None:intergenic | 45.0% | |
GCTCATAAGGATGAAACCGA+GGG | + | chr1.2:50379961-50379980 | MS.gene30896:CDS | 45.0% | |
GGTCAAAAGACAACTAGCTG+AGG | - | chr1.2:50381642-50381661 | None:intergenic | 45.0% | |
GTAACTGTGTGGAGCATGAA+AGG | + | chr1.2:50380328-50380347 | MS.gene30896:intron | 45.0% | |
GTACATCACTAGGCGTATCT+TGG | + | chr1.2:50381322-50381341 | MS.gene30896:intron | 45.0% | |
GTCGATATCTCGTACAGCAA+CGG | + | chr1.2:50380493-50380512 | MS.gene30896:CDS | 45.0% | |
GTTCAGGCGACAACACAAAA+AGG | - | chr1.2:50381283-50381302 | None:intergenic | 45.0% | |
GTTGCTGGACATGATCCTAA+AGG | + | chr1.2:50383751-50383770 | MS.gene30896:CDS | 45.0% | |
GTTTCAAATCGGGATGTGCA+TGG | + | chr1.2:50383061-50383080 | MS.gene30896:CDS | 45.0% | |
TACGCCTAGTGATGTACGTA+AGG | - | chr1.2:50381319-50381338 | None:intergenic | 45.0% | |
TCATGCATGGCTCAGAAATG+TGG | + | chr1.2:50380923-50380942 | MS.gene30896:CDS | 45.0% | |
TCCGATATGTACCGAAGAGA+TGG | + | chr1.2:50379471-50379490 | MS.gene30896:CDS | 45.0% | |
TCGATATCTCGTACAGCAAC+GGG | + | chr1.2:50380494-50380513 | MS.gene30896:CDS | 45.0% | |
TCTTCATCTGCAAGGTGAAG+AGG | - | chr1.2:50380265-50380284 | None:intergenic | 45.0% | |
TGTATCTGGCAGTCTTCCAA+AGG | + | chr1.2:50382640-50382659 | MS.gene30896:CDS | 45.0% | |
TGTCAGACAGAATACCACCT+GGG | + | chr1.2:50385343-50385362 | MS.gene30896:CDS | 45.0% | |
TGTGGCTGCAAATGTTCAAC+TGG | - | chr1.2:50385528-50385547 | None:intergenic | 45.0% | |
TTCTGTGAGTACAAGCTTCC+TGG | + | chr1.2:50383000-50383019 | MS.gene30896:CDS | 45.0% | |
TTGTCTGGCAAAGGAAAACC+TGG | - | chr1.2:50383686-50383705 | None:intergenic | 45.0% | |
TTTGTCATAAGGTGAACGGC+AGG | - | chr1.2:50379998-50380017 | None:intergenic | 45.0% | |
! | AACTCGACCGATTCCTCTTT+AGG | + | chr1.2:50383175-50383194 | MS.gene30896:CDS | 45.0% |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr1.2:50384995-50385014 | None:intergenic | 45.0% |
! | ACTCGACCGATTCCTCTTTA+GGG | + | chr1.2:50383176-50383195 | MS.gene30896:CDS | 45.0% |
! | ACTTTTGGACACTGCTTTGG+TGG | - | chr1.2:50382133-50382152 | None:intergenic | 45.0% |
! | ATCAAGCCATCATCTGAAGC+AGG | + | chr1.2:50383378-50383397 | MS.gene30896:CDS | 45.0% |
! | ATTCAACCACACCAGCCTTT+TGG | + | chr1.2:50383236-50383255 | MS.gene30896:CDS | 45.0% |
! | CAACCTAAAGCAGAAGCATG+CGG | - | chr1.2:50382502-50382521 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr1.2:50384996-50385015 | None:intergenic | 45.0% |
! | GCTTCAGATGATGGCTTGAT+TGG | - | chr1.2:50383378-50383397 | None:intergenic | 45.0% |
! | GTGCAACCTTTTCTTGACCA+AGG | - | chr1.2:50382979-50382998 | None:intergenic | 45.0% |
! | TCTTGGATTTTGCGCAAAGC+AGG | - | chr1.2:50383652-50383671 | None:intergenic | 45.0% |
! | TGATTGGGTTGTTACTTGCG+AGG | + | chr1.2:50380830-50380849 | MS.gene30896:intron | 45.0% |
! | TGTTTAGGATCATCTGGTGG+TGG | - | chr1.2:50382099-50382118 | None:intergenic | 45.0% |
! | TTCAACCACACCAGCCTTTT+GGG | + | chr1.2:50383237-50383256 | MS.gene30896:CDS | 45.0% |
! | TTCATCACGTGCTGGTAATC+TGG | + | chr1.2:50382676-50382695 | MS.gene30896:CDS | 45.0% |
!! | AACGTAGGGAGTACTTTGGA+AGG | + | chr1.2:50380450-50380469 | MS.gene30896:CDS | 45.0% |
!! | ACTCTGCTTTACCGACTTGT+AGG | + | chr1.2:50381172-50381191 | MS.gene30896:intron | 45.0% |
!! | AGGGAGTACTTTGGAAGGTA+TGG | + | chr1.2:50380455-50380474 | MS.gene30896:CDS | 45.0% |
!! | ATTTTGGCACTGCTTCCTAC+TGG | - | chr1.2:50381085-50381104 | None:intergenic | 45.0% |
!! | CTTCAACGTAGGGAGTACTT+TGG | + | chr1.2:50380446-50380465 | MS.gene30896:CDS | 45.0% |
!! | GGTGCTTTGAAGGATGTGTA+TGG | - | chr1.2:50383631-50383650 | None:intergenic | 45.0% |
!! | TGCAGGAAGTGCTGTTGAAT+TGG | - | chr1.2:50382348-50382367 | None:intergenic | 45.0% |
!!! | CGTGATTTTGTGATGATGGG+TGG | + | chr1.2:50380857-50380876 | MS.gene30896:intron | 45.0% |
AAAAAGGGAATCCAGGCTGG+GGG | - | chr1.2:50381267-50381286 | None:intergenic | 50.0% | |
ACCAGTACCCTCACTCTTCA+CGG | - | chr1.2:50383485-50383504 | None:intergenic | 50.0% | |
ACTAAGTGGGGTAGGCTACA+TGG | - | chr1.2:50384983-50385002 | None:intergenic | 50.0% | |
ACTAGGGCAAGGTGTGTATC+TGG | + | chr1.2:50382626-50382645 | MS.gene30896:intron | 50.0% | |
ACTCCCTACGTTGAAGTAGC+TGG | - | chr1.2:50380442-50380461 | None:intergenic | 50.0% | |
AGAGAAGACCGTGAAGAGTG+AGG | + | chr1.2:50383474-50383493 | MS.gene30896:CDS | 50.0% | |
AGGTTGGCACTGTACAGTTG+AGG | - | chr1.2:50384648-50384667 | None:intergenic | 50.0% | |
AGTCTCTATTGCTGCAAGGC+TGG | - | chr1.2:50381467-50381486 | None:intergenic | 50.0% | |
ATCTTCCCAAAAGGCTGGTG+TGG | - | chr1.2:50383245-50383264 | None:intergenic | 50.0% | |
ATGTAGCCTACCCCACTTAG+TGG | + | chr1.2:50384982-50385001 | MS.gene30896:intron | 50.0% | |
CAAAAAGGGAATCCAGGCTG+GGG | - | chr1.2:50381268-50381287 | None:intergenic | 50.0% | |
CAATGGCAGCTAACTGTCGA+AGG | + | chr1.2:50380031-50380050 | MS.gene30896:CDS | 50.0% | |
CACAAAAAGGGAATCCAGGC+TGG | - | chr1.2:50381270-50381289 | None:intergenic | 50.0% | |
CATTACCAAGAGTTGGCTGC+AGG | - | chr1.2:50382365-50382384 | None:intergenic | 50.0% | |
CCACCAGCTACTTCAACGTA+GGG | + | chr1.2:50380436-50380455 | MS.gene30896:intron | 50.0% | |
CCACTTAGTGGGATAAGGCT+TGG | + | chr1.2:50384994-50385013 | MS.gene30896:intron | 50.0% | |
CCTCCACTATTCCCCTACTA+GGG | - | chr1.2:50385620-50385639 | None:intergenic | 50.0% | |
CTACCCCACTTAGTGGGATA+AGG | + | chr1.2:50384989-50385008 | MS.gene30896:intron | 50.0% | |
CTCATGCTTCAAGTCCACCT+GGG | + | chr1.2:50385313-50385332 | MS.gene30896:CDS | 50.0% | |
CTGCAGCCAACTCTTGGTAA+TGG | + | chr1.2:50382363-50382382 | MS.gene30896:intron | 50.0% | |
CTGTCTGACATTGCAAACCC+AGG | - | chr1.2:50385333-50385352 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+AGG | - | chr1.2:50384991-50385010 | None:intergenic | 50.0% | |
GAGAAGACCGTGAAGAGTGA+GGG | + | chr1.2:50383475-50383494 | MS.gene30896:CDS | 50.0% | |
GATCAACAACAACCCGGCAA+AGG | + | chr1.2:50383298-50383317 | MS.gene30896:CDS | 50.0% | |
GCAGCGATAATTTAGCCTCC+AGG | + | chr1.2:50383320-50383339 | MS.gene30896:CDS | 50.0% | |
GCAGGATGCCACAAGAAAAC+TGG | - | chr1.2:50384094-50384113 | None:intergenic | 50.0% | |
GCTTCAGATGCTGATCAGTC+AGG | - | chr1.2:50379498-50379517 | None:intergenic | 50.0% | |
GGAGGTAAAACACTCCCTGA+AGG | - | chr1.2:50382078-50382097 | None:intergenic | 50.0% | |
GGATGTGCATGGCTCATGTT+CGG | + | chr1.2:50383072-50383091 | MS.gene30896:CDS | 50.0% | |
GGCTCATAAGGATGAAACCG+AGG | + | chr1.2:50379960-50379979 | MS.gene30896:CDS | 50.0% | |
GTCGAAGGTTGAGTTATGGC+TGG | + | chr1.2:50380046-50380065 | MS.gene30896:intron | 50.0% | |
TAGCCGCATGCTTCTGCTTT+AGG | + | chr1.2:50382496-50382515 | MS.gene30896:intron | 50.0% | |
TCCACCAGCTACTTCAACGT+AGG | + | chr1.2:50380435-50380454 | MS.gene30896:intron | 50.0% | |
TCCTCCACTATTCCCCTACT+AGG | - | chr1.2:50385621-50385640 | None:intergenic | 50.0% | |
TCTGACATTGCAAACCCAGG+TGG | - | chr1.2:50385330-50385349 | None:intergenic | 50.0% | |
TGACCCTAGTAGGGGAATAG+TGG | + | chr1.2:50385614-50385633 | MS.gene30896:CDS | 50.0% | |
TGTAGCCTACCCCACTTAGT+GGG | + | chr1.2:50384983-50385002 | MS.gene30896:intron | 50.0% | |
TTCTCTAATCCTGCCCCCAA+GGG | - | chr1.2:50383460-50383479 | None:intergenic | 50.0% | |
TTGATTCCCAAACCCTGCCA+GGG | + | chr1.2:50382723-50382742 | MS.gene30896:CDS | 50.0% | |
! | ACAGATGGAGGAGCATACTG+TGG | - | chr1.2:50385546-50385565 | None:intergenic | 50.0% |
! | ATACCACCTGGGTTTTCTCG+CGG | + | chr1.2:50385354-50385373 | MS.gene30896:CDS | 50.0% |
! | ATTGATTCCCAAACCCTGCC+AGG | + | chr1.2:50382722-50382741 | MS.gene30896:CDS | 50.0% |
! | CATCTGAAGCCGTGCAAATG+TGG | + | chr1.2:50379508-50379527 | MS.gene30896:CDS | 50.0% |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr1.2:50384997-50385016 | None:intergenic | 50.0% |
! | CTTTTCTTGACCAAGGCCCA+CGG | - | chr1.2:50382972-50382991 | None:intergenic | 50.0% |
! | GTAGGGGAATAGTGGAGGAA+AGG | + | chr1.2:50385622-50385641 | MS.gene30896:CDS | 50.0% |
!! | TTAGGATCATCTGGTGGTGG+AGG | - | chr1.2:50382096-50382115 | None:intergenic | 50.0% |
!!! | CAGTACGGCTGCTGTTTTCA+TGG | + | chr1.2:50382430-50382449 | MS.gene30896:intron | 50.0% |
!!! | TACGGCTGCTGTTTTCATGG+TGG | + | chr1.2:50382433-50382452 | MS.gene30896:intron | 50.0% |
CACTTCCTGCAGCCAACTCT+TGG | + | chr1.2:50382357-50382376 | MS.gene30896:CDS | 55.0% | |
CCCTACGTTGAAGTAGCTGG+TGG | - | chr1.2:50380439-50380458 | None:intergenic | 55.0% | |
CCCTAGTAGGGGAATAGTGG+AGG | + | chr1.2:50385617-50385636 | MS.gene30896:CDS | 55.0% | |
CGTGGGCCTTGGTCAAGAAA+AGG | + | chr1.2:50382970-50382989 | MS.gene30896:CDS | 55.0% | |
CTTCTCTAATCCTGCCCCCA+AGG | - | chr1.2:50383461-50383480 | None:intergenic | 55.0% | |
GAGGAAGTAAGGTTTGCCCC+AGG | - | chr1.2:50385668-50385687 | None:intergenic | 55.0% | |
GCCGTGCAAATGTGGCTATG+AGG | + | chr1.2:50379516-50379535 | MS.gene30896:CDS | 55.0% | |
GCGCAAAGCAGGTGCTTTGA+AGG | - | chr1.2:50383641-50383660 | None:intergenic | 55.0% | |
GCTCATGCTTCAAGTCCACC+TGG | + | chr1.2:50385312-50385331 | MS.gene30896:CDS | 55.0% | |
GGCAGCTCCATTGCTTGAAC+CGG | - | chr1.2:50382327-50382346 | None:intergenic | 55.0% | |
TCATAAGGTGAACGGCAGGC+AGG | - | chr1.2:50379994-50380013 | None:intergenic | 55.0% | |
TGATTCCCAAACCCTGCCAG+GGG | + | chr1.2:50382724-50382743 | MS.gene30896:CDS | 55.0% | |
TTTACTGAACCCTTGGGGGC+AGG | + | chr1.2:50383448-50383467 | MS.gene30896:CDS | 55.0% | |
! | ACCGTGAAGAGTGAGGGTAC+TGG | + | chr1.2:50383481-50383500 | MS.gene30896:CDS | 55.0% |
! | TACCACCTGGGTTTTCTCGC+GGG | + | chr1.2:50385355-50385374 | MS.gene30896:CDS | 55.0% |
ACTCTCCCGCGAGAAAACCC+AGG | - | chr1.2:50385363-50385382 | None:intergenic | 60.0% | |
CATGTGGTGCGGTGATCTCC+AGG | - | chr1.2:50383021-50383040 | None:intergenic | 60.0% | |
GTGAACGGCAGGCAGGACAA+CGG | - | chr1.2:50379987-50380006 | None:intergenic | 60.0% | |
AAGCAGCCCCTGGCAGGGTT+TGG | - | chr1.2:50382733-50382752 | None:intergenic | 65.0% | |
AGCAGCCCCTGGCAGGGTTT+GGG | - | chr1.2:50382732-50382751 | None:intergenic | 65.0% | |
CAGGGGCTGCTTGCACCGAA+AGG | + | chr1.2:50382741-50382760 | MS.gene30896:CDS | 65.0% | |
CTCCCGCGAGAAAACCCAGG+TGG | - | chr1.2:50385360-50385379 | None:intergenic | 65.0% | |
GGTCAACTATGCCCCCAGCC+TGG | + | chr1.2:50381253-50381272 | MS.gene30896:intron | 65.0% | |
TCAGCAGCTTCCGTGGGCCT+TGG | + | chr1.2:50382959-50382978 | MS.gene30896:intron | 65.0% | |
! | CTTTCGGTGCAAGCAGCCCC+TGG | - | chr1.2:50382743-50382762 | None:intergenic | 65.0% |
GCAGGCAGGACAACGGCCCT+CGG | - | chr1.2:50379980-50379999 | None:intergenic | 70.0% | |
GGTGCAAGCAGCCCCTGGCA+GGG | - | chr1.2:50382738-50382757 | None:intergenic | 70.0% | |
CGGTGCAAGCAGCCCCTGGC+AGG | - | chr1.2:50382739-50382758 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 50379445 | 50386046 | 50379445 | ID=MS.gene30896 |
chr1.2 | mRNA | 50379445 | 50386046 | 50379445 | ID=MS.gene30896.t1;Parent=MS.gene30896 |
chr1.2 | exon | 50379445 | 50379537 | 50379445 | ID=MS.gene30896.t1.exon1;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50379445 | 50379537 | 50379445 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50379925 | 50380052 | 50379925 | ID=MS.gene30896.t1.exon2;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50379925 | 50380052 | 50379925 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50380138 | 50380285 | 50380138 | ID=MS.gene30896.t1.exon3;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50380138 | 50380285 | 50380138 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50380443 | 50380552 | 50380443 | ID=MS.gene30896.t1.exon4;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50380443 | 50380552 | 50380443 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50380729 | 50380812 | 50380729 | ID=MS.gene30896.t1.exon5;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50380729 | 50380812 | 50380729 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50380896 | 50380944 | 50380896 | ID=MS.gene30896.t1.exon6;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50380896 | 50380944 | 50380896 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50381468 | 50381559 | 50381468 | ID=MS.gene30896.t1.exon7;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50381468 | 50381559 | 50381468 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50382029 | 50382161 | 50382029 | ID=MS.gene30896.t1.exon8;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50382029 | 50382161 | 50382029 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50382308 | 50382378 | 50382308 | ID=MS.gene30896.t1.exon9;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50382308 | 50382378 | 50382308 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50382631 | 50382884 | 50382631 | ID=MS.gene30896.t1.exon10;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50382631 | 50382884 | 50382631 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50382966 | 50383910 | 50382966 | ID=MS.gene30896.t1.exon11;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50382966 | 50383910 | 50382966 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50385304 | 50385405 | 50385304 | ID=MS.gene30896.t1.exon12;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50385304 | 50385405 | 50385304 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
chr1.2 | exon | 50385529 | 50386046 | 50385529 | ID=MS.gene30896.t1.exon13;Parent=MS.gene30896.t1 |
chr1.2 | CDS | 50385529 | 50386046 | 50385529 | ID=cds.MS.gene30896.t1;Parent=MS.gene30896.t1 |
Gene Sequence |
Protein sequence |