Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30992.t1 | XP_024633390.1 | 99.1 | 452 | 4 | 0 | 1 | 452 | 1 | 452 | 6.90E-255 | 889.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30992.t1 | Q9FKT8 | 79.5 | 395 | 81 | 0 | 58 | 452 | 61 | 455 | 6.4e-185 | 648.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30992.t1 | G7JAZ9 | 99.1 | 452 | 4 | 0 | 1 | 452 | 48 | 499 | 5.0e-255 | 889.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049308 | MS.gene30992 | 0.863166 | 3.02E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30992.t1 | MTR_3g095790 | 99.115 | 452 | 4 | 0 | 1 | 452 | 48 | 499 | 0.0 | 915 |
| MS.gene30992.t1 | MTR_5g096830 | 89.201 | 463 | 35 | 6 | 1 | 452 | 1 | 459 | 0.0 | 801 |
| MS.gene30992.t1 | MTR_5g096830 | 95.918 | 343 | 14 | 0 | 110 | 452 | 1 | 343 | 0.0 | 660 |
| MS.gene30992.t1 | MTR_5g096830 | 96.721 | 244 | 8 | 0 | 110 | 353 | 1 | 244 | 4.63e-178 | 498 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30992.t1 | AT5G56090 | 79.293 | 396 | 82 | 0 | 57 | 452 | 60 | 455 | 0.0 | 640 |
Find 136 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTTACTGCGGTCTCTTT+TGG | 0.194502 | 3.3:+79333608 | MS.gene30992:CDS |
| ATAAGGCACTCACTGAAATT+AGG | 0.203303 | 3.3:-79334325 | None:intergenic |
| CTTTGGCATGGCATCTGTTC+AGG | 0.249061 | 3.3:+79334406 | MS.gene30992:CDS |
| AAGAATTCAAGTTCATATAT+TGG | 0.279114 | 3.3:+79333245 | MS.gene30992:CDS |
| GTCTCTGGTGCATTTGTTGC+AGG | 0.281738 | 3.3:+79333748 | MS.gene30992:CDS |
| GATGGTTAAAAGTGGTTTAG+AGG | 0.285283 | 3.3:+79333426 | MS.gene30992:CDS |
| CTAAGAGTTTCTGCTTTGTT+TGG | 0.292561 | 3.3:+79333370 | MS.gene30992:CDS |
| GTTTGGCCTGGGTGCCGGGC+AGG | 0.295557 | 3.3:+79333387 | MS.gene30992:CDS |
| TCACTTTACCGCTTGTATTC+AGG | 0.298272 | 3.3:-79332833 | None:intergenic |
| CTCATATGTACCTGTTTCAT+TGG | 0.300963 | 3.3:+79334588 | MS.gene30992:CDS |
| AAAGTACCTTAGGAATATTA+TGG | 0.315798 | 3.3:-79331760 | None:intergenic |
| ATGGAAGAAGGATGAGAAAA+AGG | 0.318843 | 3.3:-79331671 | None:intergenic |
| GTTTCTAAGACGGTGTCTGC+TGG | 0.323987 | 3.3:+79332575 | MS.gene30992:CDS |
| AGTTTCTGCTTTGTTTGGCC+TGG | 0.325487 | 3.3:+79333375 | MS.gene30992:CDS |
| GCTTTGTTTGGCCTGGGTGC+CGG | 0.332317 | 3.3:+79333382 | MS.gene30992:CDS |
| TCTGTGATCGGAGGCATCTT+TGG | 0.335894 | 3.3:+79334389 | MS.gene30992:CDS |
| CACAGAAGGTGGTTGGAATA+TGG | 0.346396 | 3.3:+79332648 | MS.gene30992:CDS |
| CTTTGTTTGGCCTGGGTGCC+GGG | 0.347622 | 3.3:+79333383 | MS.gene30992:CDS |
| TTCATATATTGGATGGAGTA+TGG | 0.349375 | 3.3:+79333256 | MS.gene30992:CDS |
| TAATTTCAGTGAGTGCCTTA+TGG | 0.353453 | 3.3:+79334327 | MS.gene30992:CDS |
| CTTGAATGATTGTTGTTGTA+TGG | 0.372902 | 3.3:-79331690 | None:intergenic |
| CTGGTCTTTCAATGACTGAT+TGG | 0.376044 | 3.3:+79332738 | MS.gene30992:CDS |
| GGTGCCGGGCAGGGTCTCAT+TGG | 0.377328 | 3.3:+79333397 | MS.gene30992:CDS |
| TTTGGCCTGGGTGCCGGGCA+GGG | 0.387716 | 3.3:+79333388 | MS.gene30992:CDS |
| GTTTCTGCTTTGTTTGGCCT+GGG | 0.391846 | 3.3:+79333376 | MS.gene30992:CDS |
| GGCTCTTCGGCTCTGCTGCA+TGG | 0.395595 | 3.3:+79332669 | MS.gene30992:CDS |
| ATGGTTGTCAACAAGAAAAC+TGG | 0.401662 | 3.3:+79334346 | MS.gene30992:CDS |
| TAAGGCACTCACTGAAATTA+GGG | 0.406985 | 3.3:-79334324 | None:intergenic |
| ACGAAAGAAATGGGTGGAAA+TGG | 0.411067 | 3.3:-79331726 | None:intergenic |
| AGGTGAGCTGCGAGACGATA+AGG | 0.414513 | 3.3:-79333571 | None:intergenic |
| TGCTGCATGGGTGTTTACTA+TGG | 0.415471 | 3.3:+79332682 | MS.gene30992:CDS |
| GGCTGAGAATATTCAGTTGG+TGG | 0.416405 | 3.3:-79333538 | None:intergenic |
| TTTCTAAGACGGTGTCTGCT+GGG | 0.431255 | 3.3:+79332576 | MS.gene30992:CDS |
| CCGGGCAGGGTCTCATTGGC+TGG | 0.436364 | 3.3:+79333401 | MS.gene30992:CDS |
| TCATATGTACCTGTTTCATT+GGG | 0.436558 | 3.3:+79334589 | MS.gene30992:CDS |
| ATCGGAAAGTACGAAAGAAA+TGG | 0.436920 | 3.3:-79331736 | None:intergenic |
| GTTTGGTTACAGGTCACCTT+GGG | 0.440175 | 3.3:+79334550 | MS.gene30992:intron |
| TTTCAACCCCTCGTTATGTA+TGG | 0.447927 | 3.3:-79332600 | None:intergenic |
| AAGTACCTTAGGAATATTAT+GGG | 0.454815 | 3.3:-79331759 | None:intergenic |
| AGTGATTCAGCCGGTGGCTC+AGG | 0.456013 | 3.3:-79333652 | None:intergenic |
| AGTCATTGAAAGACCAGATC+TGG | 0.459275 | 3.3:-79332732 | None:intergenic |
| GGGTTGCAGTTGCAAGGATC+CGG | 0.461286 | 3.3:-79334304 | None:intergenic |
| GTGTTTACTATGGTCATACT+TGG | 0.461574 | 3.3:+79332692 | MS.gene30992:CDS |
| AAGACCAGATCTGGTGAGTC+TGG | 0.463516 | 3.3:-79332723 | None:intergenic |
| TTCCGAAGATGGGTGATACA+TGG | 0.467914 | 3.3:+79333912 | MS.gene30992:CDS |
| TGTTTACTATGGTCATACTT+GGG | 0.468604 | 3.3:+79332693 | MS.gene30992:CDS |
| GTGGTTGGAATATGGCTCTT+CGG | 0.471056 | 3.3:+79332656 | MS.gene30992:CDS |
| CCAGCCAATGAGACCCTGCC+CGG | 0.472748 | 3.3:-79333401 | None:intergenic |
| TGGTGGAGAGATAAAATGTT+TGG | 0.475471 | 3.3:+79331569 | None:intergenic |
| GGGTCTCATTGGCTGGTGGA+TGG | 0.475646 | 3.3:+79333408 | MS.gene30992:CDS |
| AATGACTGATTGGAAATTCA+CGG | 0.482925 | 3.3:+79332748 | MS.gene30992:CDS |
| ATCCATGTATCACCCATCTT+CGG | 0.483371 | 3.3:-79333914 | None:intergenic |
| TTAACCAGACTCACCAGATC+TGG | 0.485033 | 3.3:+79332719 | MS.gene30992:CDS |
| ACTTCTCAAATCGCTGCCTC+AGG | 0.487353 | 3.3:+79334693 | MS.gene30992:CDS |
| TGTGCAGTACCCAATGAAAC+AGG | 0.491136 | 3.3:-79334598 | None:intergenic |
| GCTCTTCGGCTCTGCTGCAT+GGG | 0.492096 | 3.3:+79332670 | MS.gene30992:CDS |
| GTTTACTATGGTCATACTTG+GGG | 0.495384 | 3.3:+79332694 | MS.gene30992:CDS |
| GGGTTGAAACTGCTCGTGAC+AGG | 0.495776 | 3.3:+79332614 | MS.gene30992:CDS |
| GTTGGTCTTACTGCTGTCTC+TGG | 0.501689 | 3.3:+79333733 | MS.gene30992:CDS |
| ATTCAAGTTCATATATTGGA+TGG | 0.507471 | 3.3:+79333249 | MS.gene30992:CDS |
| TGTTGTTATGCCTGAGCCAC+CGG | 0.507525 | 3.3:+79333642 | MS.gene30992:CDS |
| TGGAGTATGGACATCGTATG+TGG | 0.508780 | 3.3:+79333269 | MS.gene30992:CDS |
| TTATGAAGAAAATATGAATA+CGG | 0.509606 | 3.3:-79333322 | None:intergenic |
| CCTGCAGTCCGGTCTGTGAT+CGG | 0.510812 | 3.3:+79334377 | MS.gene30992:CDS |
| GGAGTATGGACATCGTATGT+GGG | 0.512226 | 3.3:+79333270 | MS.gene30992:CDS |
| TCAAAGAAATTTCGAATCAG+AGG | 0.513360 | 3.3:-79333962 | None:intergenic |
| TTGGGTACTGCACATCAAGC+TGG | 0.514431 | 3.3:+79334607 | MS.gene30992:CDS |
| TGTTTGATTCACAAGCTCAC+AGG | 0.516244 | 3.3:+79331623 | MS.gene30992:CDS |
| TGCTTAATCACACGGTTCGA+AGG | 0.519149 | 3.3:+79334659 | MS.gene30992:CDS |
| CCGATCCCATAATATTCCTA+AGG | 0.521182 | 3.3:+79331754 | MS.gene30992:CDS |
| AGACGATAAGGGCTTACTCT+TGG | 0.530529 | 3.3:-79333559 | None:intergenic |
| TGTTTGGTTACAGGTCACCT+TGG | 0.532225 | 3.3:+79334549 | MS.gene30992:intron |
| TCGGAAAGTACGAAAGAAAT+GGG | 0.534716 | 3.3:-79331735 | None:intergenic |
| TGAGACCCTGCCCGGCACCC+AGG | 0.535609 | 3.3:-79333393 | None:intergenic |
| CACGGTTCGAAGGCCATCCT+CGG | 0.537075 | 3.3:+79334669 | MS.gene30992:CDS |
| GGCAGGGTCTCATTGGCTGG+TGG | 0.537460 | 3.3:+79333404 | MS.gene30992:CDS |
| AAGAAATGGGTGGAAATGGA+AGG | 0.537983 | 3.3:-79331722 | None:intergenic |
| TGAGAATACATCGACTGTAC+AGG | 0.539915 | 3.3:+79333982 | MS.gene30992:CDS |
| AAATTAGGGTTGCAGTTGCA+AGG | 0.542607 | 3.3:-79334310 | None:intergenic |
| AATCACTAACATGGGTCCGT+GGG | 0.544047 | 3.3:+79333668 | MS.gene30992:CDS |
| GATTGTTGTTGTATGGAAGA+AGG | 0.544230 | 3.3:-79331683 | None:intergenic |
| CCGATCACAGACCGGACTGC+AGG | 0.547715 | 3.3:-79334377 | None:intergenic |
| CTTGGCTGAGAATATTCAGT+TGG | 0.547748 | 3.3:-79333541 | None:intergenic |
| ATGACTGATTGGAAATTCAC+GGG | 0.548486 | 3.3:+79332749 | MS.gene30992:CDS |
| CTCCTTTGTCTGATGAGGCG+TGG | 0.550365 | 3.3:+79332780 | MS.gene30992:CDS |
| CCTTAGGAATATTATGGGAT+CGG | 0.554125 | 3.3:-79331754 | None:intergenic |
| GGTGAGCTGCGAGACGATAA+GGG | 0.554481 | 3.3:-79333570 | None:intergenic |
| CACCGGCTGAATCACTAACA+TGG | 0.555370 | 3.3:+79333659 | MS.gene30992:CDS |
| GGTGGAGAGATAAAATGTTT+GGG | 0.557457 | 3.3:+79331570 | None:intergenic |
| TTGCCTGTCAGCTTACTCGT+TGG | 0.557599 | 3.3:+79333715 | MS.gene30992:CDS |
| AAACAGGTACATATGAGAGA+AGG | 0.559091 | 3.3:-79334582 | None:intergenic |
| TCTCATGCACAGAAGGTGGT+TGG | 0.559566 | 3.3:+79332641 | MS.gene30992:CDS |
| GGGTCATCGTGTTTCTAAGA+CGG | 0.562157 | 3.3:+79332565 | MS.gene30992:intron |
| TGGACATACATCCTGCAGTC+CGG | 0.563232 | 3.3:+79334366 | MS.gene30992:CDS |
| AGGAGGTTCTCATGCACAGA+AGG | 0.564528 | 3.3:+79332634 | MS.gene30992:CDS |
| GTTTGATTCACAAGCTCACA+GGG | 0.567830 | 3.3:+79331624 | MS.gene30992:CDS |
| GTTCCCTCCTTTGTCTGATG+AGG | 0.567933 | 3.3:+79332775 | MS.gene30992:CDS |
| GAATCACTAACATGGGTCCG+TGG | 0.568732 | 3.3:+79333667 | MS.gene30992:CDS |
| TTTACTATGGTCATACTTGG+GGG | 0.574839 | 3.3:+79332695 | MS.gene30992:CDS |
| ATCGCTGCCTCAGGTTGTCA+AGG | 0.575597 | 3.3:+79334702 | MS.gene30992:CDS |
| GTAAAACAAACATAAGTCCA+AGG | 0.594062 | 3.3:-79333300 | None:intergenic |
| TATGTTACTGCTTAATCACA+CGG | 0.599610 | 3.3:+79334651 | MS.gene30992:CDS |
| TAGTTTGCCTTGACAACCTG+AGG | 0.605573 | 3.3:-79334709 | None:intergenic |
| GGCTGGTGGATGGTTAAAAG+TGG | 0.606546 | 3.3:+79333418 | MS.gene30992:CDS |
| GCAGTCCGGTCTGTGATCGG+AGG | 0.609023 | 3.3:+79334380 | MS.gene30992:CDS |
| CATGTTAGTGATTCAGCCGG+TGG | 0.609054 | 3.3:-79333658 | None:intergenic |
| AACAGGTACATATGAGAGAA+GGG | 0.611039 | 3.3:-79334581 | None:intergenic |
| GATTTGAGAAGTGCCGAGGA+TGG | 0.611196 | 3.3:-79334682 | None:intergenic |
| TTCTAAGACGGTGTCTGCTG+GGG | 0.611493 | 3.3:+79332577 | MS.gene30992:CDS |
| AGAAATGGGTGGAAATGGAA+GGG | 0.612420 | 3.3:-79331721 | None:intergenic |
| GATCGGAGGCATCTTTGGCA+TGG | 0.616105 | 3.3:+79334394 | MS.gene30992:CDS |
| AGATGCCTCCGATCACAGAC+CGG | 0.616679 | 3.3:-79334385 | None:intergenic |
| ACCCATGTTAGTGATTCAGC+CGG | 0.619631 | 3.3:-79333661 | None:intergenic |
| ACGCCTCATCAGACAAAGGA+GGG | 0.621078 | 3.3:-79332778 | None:intergenic |
| TCTTTACTTTAGCAGCCCCA+CGG | 0.622740 | 3.3:-79333684 | None:intergenic |
| GAGTATGGACATCGTATGTG+GGG | 0.623390 | 3.3:+79333271 | MS.gene30992:CDS |
| TGCTGGGGCCATACATAACG+AGG | 0.625400 | 3.3:+79332592 | MS.gene30992:CDS |
| AGGTTCTCATGCACAGAAGG+TGG | 0.627630 | 3.3:+79332637 | MS.gene30992:CDS |
| AGCAGTCGCCTGAATACAAG+CGG | 0.633913 | 3.3:+79332825 | MS.gene30992:CDS |
| ACCGGCTGAATCACTAACAT+GGG | 0.639359 | 3.3:+79333660 | MS.gene30992:CDS |
| TTGAAACTGCTCGTGACAGG+AGG | 0.640175 | 3.3:+79332617 | MS.gene30992:CDS |
| AGACCAACGAGTAAGCTGAC+AGG | 0.646512 | 3.3:-79333718 | None:intergenic |
| TAAAACAAACATAAGTCCAA+GGG | 0.647579 | 3.3:-79333299 | None:intergenic |
| CAGCGATTTGAGAAGTGCCG+AGG | 0.653773 | 3.3:-79334686 | None:intergenic |
| TCAGCATTTGCTATTTACTG+CGG | 0.654834 | 3.3:+79333598 | MS.gene30992:CDS |
| CACGCCTCATCAGACAAAGG+AGG | 0.657857 | 3.3:-79332779 | None:intergenic |
| CAAGCTCACAGGGAGGAAGA+CGG | 0.658180 | 3.3:+79331634 | MS.gene30992:CDS |
| GAGAAGGGTCGTAATTCCCA+AGG | 0.663918 | 3.3:-79334566 | None:intergenic |
| CTGGGGCCATACATAACGAG+GGG | 0.678781 | 3.3:+79332594 | MS.gene30992:CDS |
| ATCACTAACATGGGTCCGTG+GGG | 0.679851 | 3.3:+79333669 | MS.gene30992:CDS |
| GAAAGTACGAAAGAAATGGG+TGG | 0.680151 | 3.3:-79331732 | None:intergenic |
| GCTGGGGCCATACATAACGA+GGG | 0.687361 | 3.3:+79332593 | MS.gene30992:CDS |
| AACCACGCCTCATCAGACAA+AGG | 0.710528 | 3.3:-79332782 | None:intergenic |
| AGTATGGACATCGTATGTGG+GGG | 0.718998 | 3.3:+79333272 | MS.gene30992:CDS |
| AAATAGCAAATGCTGATGTG+AGG | 0.721510 | 3.3:-79333591 | None:intergenic |
| TGATTCACAAGCTCACAGGG+AGG | 0.754269 | 3.3:+79331627 | MS.gene30992:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAAAAAAAGATAAAA+TGG | + | chr3.3:79332948-79332967 | MS.gene30992:intron | 10.0% |
| !! | TGATAATTAATAAGATAAAA+TGG | + | chr3.3:79332917-79332936 | MS.gene30992:intron | 10.0% |
| !!! | TACATTTATTTTTGTAATTA+TGG | + | chr3.3:79334128-79334147 | MS.gene30992:intron | 10.0% |
| !! | ATTACAAGTACAAATAAAAT+AGG | - | chr3.3:79333813-79333832 | None:intergenic | 15.0% |
| !! | ATTTATCGTTAAATATTGTT+AGG | + | chr3.3:79334466-79334485 | MS.gene30992:intron | 15.0% |
| !! | CAAAAAAATTTAAGTAACAA+AGG | - | chr3.3:79334196-79334215 | None:intergenic | 15.0% |
| !! | GAATAATGATTAATATTGTT+GGG | + | chr3.3:79334502-79334521 | MS.gene30992:intron | 15.0% |
| !! | GTATTTATTATGAAAATCAA+AGG | + | chr3.3:79333141-79333160 | MS.gene30992:intron | 15.0% |
| !! | TAACAATATTTAACGATAAA+TGG | - | chr3.3:79334467-79334486 | None:intergenic | 15.0% |
| !! | TGATTTATAATTACAATTGT+GGG | + | chr3.3:79332063-79332082 | MS.gene30992:intron | 15.0% |
| !! | TTATGAAGAAAATATGAATA+CGG | - | chr3.3:79333325-79333344 | None:intergenic | 15.0% |
| !! | TTGATTTATAATTACAATTG+TGG | + | chr3.3:79332062-79332081 | MS.gene30992:intron | 15.0% |
| !!! | AATTTTTTTGAAACTTAAAC+TGG | + | chr3.3:79334206-79334225 | MS.gene30992:intron | 15.0% |
| !!! | ATCAAATTGATTTACATATT+TGG | + | chr3.3:79332981-79333000 | MS.gene30992:intron | 15.0% |
| !!! | ATTCATATTTTCTTCATAAA+GGG | + | chr3.3:79333326-79333345 | MS.gene30992:CDS | 15.0% |
| !!! | TATTCATATTTTCTTCATAA+AGG | + | chr3.3:79333325-79333344 | MS.gene30992:CDS | 15.0% |
| !!! | TTTTAAACAACAAAGATTTA+CGG | + | chr3.3:79332088-79332107 | MS.gene30992:intron | 15.0% |
| !! | ATGAACATTGAAAACATAAA+GGG | - | chr3.3:79331964-79331983 | None:intergenic | 20.0% |
| !! | GGAATAATGATTAATATTGT+TGG | + | chr3.3:79334501-79334520 | MS.gene30992:intron | 20.0% |
| !! | TGAATGTTTAGTATGTATAT+TGG | + | chr3.3:79332502-79332521 | MS.gene30992:intron | 20.0% |
| !! | TTTATGTTGTTAAATTTCCA+CGG | - | chr3.3:79334249-79334268 | None:intergenic | 20.0% |
| !!! | AACTTGTTGATTTACATTTT+TGG | + | chr3.3:79333035-79333054 | MS.gene30992:intron | 20.0% |
| !!! | AAGAATTCAAGTTCATATAT+TGG | + | chr3.3:79333245-79333264 | MS.gene30992:CDS | 20.0% |
| ! | AAGTACCTTAGGAATATTAT+GGG | - | chr3.3:79331762-79331781 | None:intergenic | 25.0% |
| ! | AATTCAAAAACTTGCAATCT+TGG | + | chr3.3:79332239-79332258 | MS.gene30992:intron | 25.0% |
| ! | ATTCAAAAACTTGCAATCTT+GGG | + | chr3.3:79332240-79332259 | MS.gene30992:intron | 25.0% |
| ! | GATGAACATTGAAAACATAA+AGG | - | chr3.3:79331965-79331984 | None:intergenic | 25.0% |
| ! | GTACTTTCCGAATAAATAAA+AGG | - | chr3.3:79334083-79334102 | None:intergenic | 25.0% |
| ! | TAAAACAAACATAAGTCCAA+GGG | - | chr3.3:79333302-79333321 | None:intergenic | 25.0% |
| ! | TAAACATTCACACAAAACAT+TGG | - | chr3.3:79332492-79332511 | None:intergenic | 25.0% |
| ! | TACTTGTAATGATAATTGAG+TGG | + | chr3.3:79333823-79333842 | MS.gene30992:intron | 25.0% |
| ! | TGAATTCCTAGATTACAAAA+TGG | - | chr3.3:79332225-79332244 | None:intergenic | 25.0% |
| !! | AAAGTACCTTAGGAATATTA+TGG | - | chr3.3:79331763-79331782 | None:intergenic | 25.0% |
| !! | ATTCAAGTTCATATATTGGA+TGG | + | chr3.3:79333249-79333268 | MS.gene30992:CDS | 25.0% |
| !! | ATTTAATACTTTTCCGAAGA+TGG | + | chr3.3:79333901-79333920 | MS.gene30992:CDS | 25.0% |
| !! | TCATTTCAAGAATGTTTTCA+GGG | - | chr3.3:79333940-79333959 | None:intergenic | 25.0% |
| !! | TTATGACATGATCAAGTTTT+GGG | - | chr3.3:79331879-79331898 | None:intergenic | 25.0% |
| !! | TTCATTTCAAGAATGTTTTC+AGG | - | chr3.3:79333941-79333960 | None:intergenic | 25.0% |
| !! | TTTAATACTTTTCCGAAGAT+GGG | + | chr3.3:79333902-79333921 | MS.gene30992:CDS | 25.0% |
| !!! | TGGTTGTCCTTTTATTTATT+CGG | + | chr3.3:79334073-79334092 | MS.gene30992:intron | 25.0% |
| !!! | TTCAATTAGTGGATTTAGAT+GGG | + | chr3.3:79331908-79331927 | MS.gene30992:intron | 25.0% |
| AAACAACAAAGATTTACGGA+TGG | + | chr3.3:79332092-79332111 | MS.gene30992:intron | 30.0% | |
| AATGACTGATTGGAAATTCA+CGG | + | chr3.3:79332748-79332767 | MS.gene30992:CDS | 30.0% | |
| ATTTACGGATGGATATTATC+TGG | + | chr3.3:79332103-79332122 | MS.gene30992:intron | 30.0% | |
| CATTGAAAACATAAAGGGTA+TGG | - | chr3.3:79331959-79331978 | None:intergenic | 30.0% | |
| GAAACTATGGTATTAGAATC+TGG | - | chr3.3:79333505-79333524 | None:intergenic | 30.0% | |
| GTAAAACAAACATAAGTCCA+AGG | - | chr3.3:79333303-79333322 | None:intergenic | 30.0% | |
| TATGTTACTGCTTAATCACA+CGG | + | chr3.3:79334651-79334670 | MS.gene30992:CDS | 30.0% | |
| TCAAAGAAATTTCGAATCAG+AGG | - | chr3.3:79333965-79333984 | None:intergenic | 30.0% | |
| TCATATGTACCTGTTTCATT+GGG | + | chr3.3:79334589-79334608 | MS.gene30992:CDS | 30.0% | |
| TGATTCAATATGAGTCAAGT+AGG | + | chr3.3:79332021-79332040 | MS.gene30992:intron | 30.0% | |
| TGTAATGATAATTGAGTGGT+TGG | + | chr3.3:79333827-79333846 | MS.gene30992:intron | 30.0% | |
| TGTTTACTATGGTCATACTT+GGG | + | chr3.3:79332693-79332712 | MS.gene30992:CDS | 30.0% | |
| TTCATATATTGGATGGAGTA+TGG | + | chr3.3:79333256-79333275 | MS.gene30992:CDS | 30.0% | |
| TTTATACAGTTCCAAAAAGC+TGG | - | chr3.3:79333009-79333028 | None:intergenic | 30.0% | |
| TTTCATCTGTGAAATGTCAA+TGG | + | chr3.3:79332426-79332445 | MS.gene30992:intron | 30.0% | |
| ! | AAACATAAAGGGTATGGTAT+TGG | - | chr3.3:79331953-79331972 | None:intergenic | 30.0% |
| ! | ACTTTTTGCAGTGTAAACAA+AGG | + | chr3.3:79333211-79333230 | MS.gene30992:intron | 30.0% |
| ! | CATGTTCCATTTTGTAATCT+AGG | + | chr3.3:79332216-79332235 | MS.gene30992:intron | 30.0% |
| ! | CTTATGACATGATCAAGTTT+TGG | - | chr3.3:79331880-79331899 | None:intergenic | 30.0% |
| ! | CTTGAATGATTGTTGTTGTA+TGG | - | chr3.3:79331693-79331712 | None:intergenic | 30.0% |
| ! | TTGTTTCTTGAATTGTGATC+TGG | + | chr3.3:79334053-79334072 | MS.gene30992:intron | 30.0% |
| ! | TTTTCTTGTTGACAACCATA+AGG | - | chr3.3:79334345-79334364 | None:intergenic | 30.0% |
| !! | AGAATAGAAGAAAGTACCTT+AGG | - | chr3.3:79331773-79331792 | None:intergenic | 30.0% |
| !! | CTTCAATTAGTGGATTTAGA+TGG | + | chr3.3:79331907-79331926 | MS.gene30992:intron | 30.0% |
| !! | TGAAATGTCAATGGTGTTAT+GGG | + | chr3.3:79332435-79332454 | MS.gene30992:intron | 30.0% |
| !!! | TTCGGAAAGTACTTTTTTGA+AGG | + | chr3.3:79334091-79334110 | MS.gene30992:intron | 30.0% |
| AAACAGGTACATATGAGAGA+AGG | - | chr3.3:79334585-79334604 | None:intergenic | 35.0% | |
| AAATAGCAAATGCTGATGTG+AGG | - | chr3.3:79333594-79333613 | None:intergenic | 35.0% | |
| AACAGGTACATATGAGAGAA+GGG | - | chr3.3:79334584-79334603 | None:intergenic | 35.0% | |
| AAGAGAGATGCTTCAATTAG+TGG | + | chr3.3:79331897-79331916 | MS.gene30992:intron | 35.0% | |
| AGGATGAGAAAAAGGAATTG+TGG | - | chr3.3:79331666-79331685 | None:intergenic | 35.0% | |
| ATGACTGATTGGAAATTCAC+GGG | + | chr3.3:79332749-79332768 | MS.gene30992:CDS | 35.0% | |
| ATGGAAGAAGGATGAGAAAA+AGG | - | chr3.3:79331674-79331693 | None:intergenic | 35.0% | |
| ATGGTTGTCAACAAGAAAAC+TGG | + | chr3.3:79334346-79334365 | MS.gene30992:CDS | 35.0% | |
| CCTTAGGAATATTATGGGAT+CGG | - | chr3.3:79331757-79331776 | None:intergenic | 35.0% | |
| CTCATATGTACCTGTTTCAT+TGG | + | chr3.3:79334588-79334607 | MS.gene30992:CDS | 35.0% | |
| GATGCTTTACATGATGTACT+TGG | + | chr3.3:79334524-79334543 | MS.gene30992:intron | 35.0% | |
| GATGGTTAAAAGTGGTTTAG+AGG | + | chr3.3:79333426-79333445 | MS.gene30992:CDS | 35.0% | |
| GCAATCTACGTGTTATCAAA+TGG | + | chr3.3:79331998-79332017 | MS.gene30992:intron | 35.0% | |
| GGATGAGAAAAAGGAATTGT+GGG | - | chr3.3:79331665-79331684 | None:intergenic | 35.0% | |
| GTATTAGAATCTGGATGAGT+TGG | - | chr3.3:79333496-79333515 | None:intergenic | 35.0% | |
| GTGTTTACTATGGTCATACT+TGG | + | chr3.3:79332692-79332711 | MS.gene30992:CDS | 35.0% | |
| GTTAAAAGTGGTTTAGAGGT+TGG | + | chr3.3:79333430-79333449 | MS.gene30992:intron | 35.0% | |
| GTTGTTAAATTTCCACGGAT+AGG | - | chr3.3:79334244-79334263 | None:intergenic | 35.0% | |
| GTTTACTATGGTCATACTTG+GGG | + | chr3.3:79332694-79332713 | MS.gene30992:CDS | 35.0% | |
| TAATCATTATTCCGCTCAGA+AGG | - | chr3.3:79334494-79334513 | None:intergenic | 35.0% | |
| TAATTTCAGTGAGTGCCTTA+TGG | + | chr3.3:79334327-79334346 | MS.gene30992:CDS | 35.0% | |
| TTCCTGAGGAAAAGAAACTA+TGG | - | chr3.3:79333518-79333537 | None:intergenic | 35.0% | |
| TTGATGTTGGCAAATAACAG+AGG | + | chr3.3:79332265-79332284 | MS.gene30992:intron | 35.0% | |
| TTTACTATGGTCATACTTGG+GGG | + | chr3.3:79332695-79332714 | MS.gene30992:CDS | 35.0% | |
| TTTGGGCAAGTAGTTGAATT+AGG | - | chr3.3:79331862-79331881 | None:intergenic | 35.0% | |
| ! | ACAATCAGATGATTTTGCTC+AGG | - | chr3.3:79332873-79332892 | None:intergenic | 35.0% |
| ! | ATAAGGCACTCACTGAAATT+AGG | - | chr3.3:79334328-79334347 | None:intergenic | 35.0% |
| ! | ATCGGAAAGTACGAAAGAAA+TGG | - | chr3.3:79331739-79331758 | None:intergenic | 35.0% |
| ! | CTAAGAGTTTCTGCTTTGTT+TGG | + | chr3.3:79333370-79333389 | MS.gene30992:CDS | 35.0% |
| ! | GATTGTTGTTGTATGGAAGA+AGG | - | chr3.3:79331686-79331705 | None:intergenic | 35.0% |
| ! | GTGAAATGTCAATGGTGTTA+TGG | + | chr3.3:79332434-79332453 | MS.gene30992:intron | 35.0% |
| ! | TAAGGCACTCACTGAAATTA+GGG | - | chr3.3:79334327-79334346 | None:intergenic | 35.0% |
| ! | TACCATAGTTTCTTTTCCTC+AGG | + | chr3.3:79333513-79333532 | MS.gene30992:intron | 35.0% |
| ! | TCGGAAAGTACGAAAGAAAT+GGG | - | chr3.3:79331738-79331757 | None:intergenic | 35.0% |
| ! | TGCTTACATGTTGATTGTCA+GGG | + | chr3.3:79333872-79333891 | MS.gene30992:intron | 35.0% |
| !! | CATATTTGGAACCAGCTTTT+TGG | + | chr3.3:79332995-79333014 | MS.gene30992:intron | 35.0% |
| !! | CATGATGTACTTGGTTTGTT+TGG | + | chr3.3:79334533-79334552 | MS.gene30992:intron | 35.0% |
| !! | CATTTTTGGAAACAGCTTTC+TGG | + | chr3.3:79333049-79333068 | MS.gene30992:intron | 35.0% |
| !! | TACTTGGTTTGTTTGGTTAC+AGG | + | chr3.3:79334540-79334559 | MS.gene30992:intron | 35.0% |
| !! | TCAGCATTTGCTATTTACTG+CGG | + | chr3.3:79333598-79333617 | MS.gene30992:CDS | 35.0% |
| !!! | AGCAATTTTAAAACGCAGCA+AGG | + | chr3.3:79331595-79331614 | MS.gene30992:CDS | 35.0% |
| !!! | TGTTTTAACAGCTCAATCAC+CGG | + | chr3.3:79334285-79334304 | MS.gene30992:intron | 35.0% |
| AAAACTGTTGTGGTGCTCTT+AGG | + | chr3.3:79332544-79332563 | MS.gene30992:intron | 40.0% | |
| AAACTGTTGTGGTGCTCTTA+GGG | + | chr3.3:79332545-79332564 | MS.gene30992:intron | 40.0% | |
| AAATTAGGGTTGCAGTTGCA+AGG | - | chr3.3:79334313-79334332 | None:intergenic | 40.0% | |
| AAGAAATGGGTGGAAATGGA+AGG | - | chr3.3:79331725-79331744 | None:intergenic | 40.0% | |
| ACGAAAGAAATGGGTGGAAA+TGG | - | chr3.3:79331729-79331748 | None:intergenic | 40.0% | |
| AGAAATGGGTGGAAATGGAA+GGG | - | chr3.3:79331724-79331743 | None:intergenic | 40.0% | |
| AGTCATTGAAAGACCAGATC+TGG | - | chr3.3:79332735-79332754 | None:intergenic | 40.0% | |
| ATCCATGTATCACCCATCTT+CGG | - | chr3.3:79333917-79333936 | None:intergenic | 40.0% | |
| ATTGTTAGGATCCTTCTGAG+CGG | + | chr3.3:79334480-79334499 | MS.gene30992:intron | 40.0% | |
| ATTTCCACGGATAGGCAAAA+TGG | - | chr3.3:79334236-79334255 | None:intergenic | 40.0% | |
| CCGATCCCATAATATTCCTA+AGG | + | chr3.3:79331754-79331773 | MS.gene30992:CDS | 40.0% | |
| CTTGGCTGAGAATATTCAGT+TGG | - | chr3.3:79333544-79333563 | None:intergenic | 40.0% | |
| GCAATCTTGGGATTTGATGT+TGG | + | chr3.3:79332252-79332271 | MS.gene30992:intron | 40.0% | |
| GTTTGATTCACAAGCTCACA+GGG | + | chr3.3:79331624-79331643 | MS.gene30992:CDS | 40.0% | |
| TCACTTTACCGCTTGTATTC+AGG | - | chr3.3:79332836-79332855 | None:intergenic | 40.0% | |
| TGTTTGATTCACAAGCTCAC+AGG | + | chr3.3:79331623-79331642 | MS.gene30992:CDS | 40.0% | |
| TTTCAACCCCTCGTTATGTA+TGG | - | chr3.3:79332603-79332622 | None:intergenic | 40.0% | |
| ! | CTATTTACTGCGGTCTCTTT+TGG | + | chr3.3:79333608-79333627 | MS.gene30992:CDS | 40.0% |
| ! | CTGCTTACATGTTGATTGTC+AGG | + | chr3.3:79333871-79333890 | MS.gene30992:intron | 40.0% |
| ! | CTGGTCTTTCAATGACTGAT+TGG | + | chr3.3:79332738-79332757 | MS.gene30992:CDS | 40.0% |
| ! | GAAAGTACGAAAGAAATGGG+TGG | - | chr3.3:79331735-79331754 | None:intergenic | 40.0% |
| ! | GACTTCTGAGAAAACTGTTG+TGG | + | chr3.3:79332534-79332553 | MS.gene30992:intron | 40.0% |
| ! | GCTTACATGTTGATTGTCAG+GGG | + | chr3.3:79333873-79333892 | MS.gene30992:intron | 40.0% |
| ! | TAAGTGCTGCTGTTGCAATT+GGG | + | chr3.3:79332159-79332178 | MS.gene30992:intron | 40.0% |
| ! | TGAGAATACATCGACTGTAC+AGG | + | chr3.3:79333982-79334001 | MS.gene30992:CDS | 40.0% |
| ! | TGATAATTGAGTGGTTGGTG+AGG | + | chr3.3:79333832-79333851 | MS.gene30992:intron | 40.0% |
| !! | ATCTGGATGAGTTGGTCAAT+TGG | - | chr3.3:79333488-79333507 | None:intergenic | 40.0% |
| AATCACTAACATGGGTCCGT+GGG | + | chr3.3:79333668-79333687 | MS.gene30992:CDS | 45.0% | |
| ACCCATGTTAGTGATTCAGC+CGG | - | chr3.3:79333664-79333683 | None:intergenic | 45.0% | |
| ACCGGCTGAATCACTAACAT+GGG | + | chr3.3:79333660-79333679 | MS.gene30992:CDS | 45.0% | |
| AGACGATAAGGGCTTACTCT+TGG | - | chr3.3:79333562-79333581 | None:intergenic | 45.0% | |
| AGTATGGACATCGTATGTGG+GGG | + | chr3.3:79333272-79333291 | MS.gene30992:CDS | 45.0% | |
| CACAGAAGGTGGTTGGAATA+TGG | + | chr3.3:79332648-79332667 | MS.gene30992:CDS | 45.0% | |
| GAGTATGGACATCGTATGTG+GGG | + | chr3.3:79333271-79333290 | MS.gene30992:CDS | 45.0% | |
| GGAGTATGGACATCGTATGT+GGG | + | chr3.3:79333270-79333289 | MS.gene30992:CDS | 45.0% | |
| GGCTGAGAATATTCAGTTGG+TGG | - | chr3.3:79333541-79333560 | None:intergenic | 45.0% | |
| GTGGTTGGAATATGGCTCTT+CGG | + | chr3.3:79332656-79332675 | MS.gene30992:CDS | 45.0% | |
| GTTTGGTTACAGGTCACCTT+GGG | + | chr3.3:79334550-79334569 | MS.gene30992:intron | 45.0% | |
| TCTTTACTTTAGCAGCCCCA+CGG | - | chr3.3:79333687-79333706 | None:intergenic | 45.0% | |
| TGCTGCATGGGTGTTTACTA+TGG | + | chr3.3:79332682-79332701 | MS.gene30992:CDS | 45.0% | |
| TGCTTAATCACACGGTTCGA+AGG | + | chr3.3:79334659-79334678 | MS.gene30992:CDS | 45.0% | |
| TGGAGTATGGACATCGTATG+TGG | + | chr3.3:79333269-79333288 | MS.gene30992:CDS | 45.0% | |
| TGTGCAGTACCCAATGAAAC+AGG | - | chr3.3:79334601-79334620 | None:intergenic | 45.0% | |
| TGTTTGGTTACAGGTCACCT+TGG | + | chr3.3:79334549-79334568 | MS.gene30992:intron | 45.0% | |
| TTAACCAGACTCACCAGATC+TGG | + | chr3.3:79332719-79332738 | MS.gene30992:CDS | 45.0% | |
| TTCCGAAGATGGGTGATACA+TGG | + | chr3.3:79333912-79333931 | MS.gene30992:CDS | 45.0% | |
| ! | GGGTCATCGTGTTTCTAAGA+CGG | + | chr3.3:79332565-79332584 | MS.gene30992:intron | 45.0% |
| ! | GTAAGTGCTGCTGTTGCAAT+TGG | + | chr3.3:79332158-79332177 | MS.gene30992:intron | 45.0% |
| ! | TAGTTTGCCTTGACAACCTG+AGG | - | chr3.3:79334712-79334731 | None:intergenic | 45.0% |
| !! | AGCTTTCTGGAACTGTGCAA+AGG | + | chr3.3:79333062-79333081 | MS.gene30992:intron | 45.0% |
| !! | AGTTTCTGCTTTGTTTGGCC+TGG | + | chr3.3:79333375-79333394 | MS.gene30992:CDS | 45.0% |
| !! | GTTTCTGCTTTGTTTGGCCT+GGG | + | chr3.3:79333376-79333395 | MS.gene30992:CDS | 45.0% |
| !! | TATTCAGTTGGTGGTTCCTG+AGG | - | chr3.3:79333532-79333551 | None:intergenic | 45.0% |
| !! | TTTCTAAGACGGTGTCTGCT+GGG | + | chr3.3:79332576-79332595 | MS.gene30992:CDS | 45.0% |
| AACCACGCCTCATCAGACAA+AGG | - | chr3.3:79332785-79332804 | None:intergenic | 50.0% | |
| AAGACCAGATCTGGTGAGTC+TGG | - | chr3.3:79332726-79332745 | None:intergenic | 50.0% | |
| ACGCCTCATCAGACAAAGGA+GGG | - | chr3.3:79332781-79332800 | None:intergenic | 50.0% | |
| ACTTCTCAAATCGCTGCCTC+AGG | + | chr3.3:79334693-79334712 | MS.gene30992:CDS | 50.0% | |
| AGACCAACGAGTAAGCTGAC+AGG | - | chr3.3:79333721-79333740 | None:intergenic | 50.0% | |
| AGCAGTCGCCTGAATACAAG+CGG | + | chr3.3:79332825-79332844 | MS.gene30992:CDS | 50.0% | |
| AGGAGGTTCTCATGCACAGA+AGG | + | chr3.3:79332634-79332653 | MS.gene30992:CDS | 50.0% | |
| AGGTTCTCATGCACAGAAGG+TGG | + | chr3.3:79332637-79332656 | MS.gene30992:CDS | 50.0% | |
| ATCACTAACATGGGTCCGTG+GGG | + | chr3.3:79333669-79333688 | MS.gene30992:CDS | 50.0% | |
| CATGTTAGTGATTCAGCCGG+TGG | - | chr3.3:79333661-79333680 | None:intergenic | 50.0% | |
| CTTTGGCATGGCATCTGTTC+AGG | + | chr3.3:79334406-79334425 | MS.gene30992:CDS | 50.0% | |
| GAATCACTAACATGGGTCCG+TGG | + | chr3.3:79333667-79333686 | MS.gene30992:CDS | 50.0% | |
| GAGAAGGGTCGTAATTCCCA+AGG | - | chr3.3:79334569-79334588 | None:intergenic | 50.0% | |
| GTTCCCTCCTTTGTCTGATG+AGG | + | chr3.3:79332775-79332794 | MS.gene30992:CDS | 50.0% | |
| TCCACGGATAGGCAAAATGG+CGG | - | chr3.3:79334233-79334252 | None:intergenic | 50.0% | |
| TCTCATGCACAGAAGGTGGT+TGG | + | chr3.3:79332641-79332660 | MS.gene30992:CDS | 50.0% | |
| TGATTCACAAGCTCACAGGG+AGG | + | chr3.3:79331627-79331646 | MS.gene30992:CDS | 50.0% | |
| TGGACATACATCCTGCAGTC+CGG | + | chr3.3:79334366-79334385 | MS.gene30992:CDS | 50.0% | |
| TGTTGTTATGCCTGAGCCAC+CGG | + | chr3.3:79333642-79333661 | MS.gene30992:CDS | 50.0% | |
| TTGAAACTGCTCGTGACAGG+AGG | + | chr3.3:79332617-79332636 | MS.gene30992:CDS | 50.0% | |
| TTGCCTGTCAGCTTACTCGT+TGG | + | chr3.3:79333715-79333734 | MS.gene30992:CDS | 50.0% | |
| ! | CACCGGCTGAATCACTAACA+TGG | + | chr3.3:79333659-79333678 | MS.gene30992:CDS | 50.0% |
| ! | GGCTGGTGGATGGTTAAAAG+TGG | + | chr3.3:79333418-79333437 | MS.gene30992:CDS | 50.0% |
| ! | GTCTCTGGTGCATTTGTTGC+AGG | + | chr3.3:79333748-79333767 | MS.gene30992:CDS | 50.0% |
| ! | TTGGGTACTGCACATCAAGC+TGG | + | chr3.3:79334607-79334626 | MS.gene30992:CDS | 50.0% |
| !! | GATTTGAGAAGTGCCGAGGA+TGG | - | chr3.3:79334685-79334704 | None:intergenic | 50.0% |
| !! | GTTGGTCTTACTGCTGTCTC+TGG | + | chr3.3:79333733-79333752 | MS.gene30992:CDS | 50.0% |
| !! | GTTTCTAAGACGGTGTCTGC+TGG | + | chr3.3:79332575-79332594 | MS.gene30992:CDS | 50.0% |
| !! | TCTGTGATCGGAGGCATCTT+TGG | + | chr3.3:79334389-79334408 | MS.gene30992:CDS | 50.0% |
| !! | TTCTAAGACGGTGTCTGCTG+GGG | + | chr3.3:79332577-79332596 | MS.gene30992:CDS | 50.0% |
| AGATGCCTCCGATCACAGAC+CGG | - | chr3.3:79334388-79334407 | None:intergenic | 55.0% | |
| AGGTGAGCTGCGAGACGATA+AGG | - | chr3.3:79333574-79333593 | None:intergenic | 55.0% | |
| ATGGACATCGTATGTGGGGG+AGG | + | chr3.3:79333275-79333294 | MS.gene30992:CDS | 55.0% | |
| CAAGCTCACAGGGAGGAAGA+CGG | + | chr3.3:79331634-79331653 | MS.gene30992:CDS | 55.0% | |
| CACGCCTCATCAGACAAAGG+AGG | - | chr3.3:79332782-79332801 | None:intergenic | 55.0% | |
| CTCCTTTGTCTGATGAGGCG+TGG | + | chr3.3:79332780-79332799 | MS.gene30992:CDS | 55.0% | |
| CTGGGGCCATACATAACGAG+GGG | + | chr3.3:79332594-79332613 | MS.gene30992:CDS | 55.0% | |
| GCTGGGGCCATACATAACGA+GGG | + | chr3.3:79332593-79332612 | MS.gene30992:CDS | 55.0% | |
| GGGTTGAAACTGCTCGTGAC+AGG | + | chr3.3:79332614-79332633 | MS.gene30992:CDS | 55.0% | |
| GGGTTGCAGTTGCAAGGATC+CGG | - | chr3.3:79334307-79334326 | None:intergenic | 55.0% | |
| GGTGAGCTGCGAGACGATAA+GGG | - | chr3.3:79333573-79333592 | None:intergenic | 55.0% | |
| TGCTGGGGCCATACATAACG+AGG | + | chr3.3:79332592-79332611 | MS.gene30992:CDS | 55.0% | |
| TGGACATCGTATGTGGGGGA+GGG | + | chr3.3:79333276-79333295 | MS.gene30992:CDS | 55.0% | |
| ! | ATCGCTGCCTCAGGTTGTCA+AGG | + | chr3.3:79334702-79334721 | MS.gene30992:CDS | 55.0% |
| !! | ACCGCCATTTTGCCTATCCG+TGG | + | chr3.3:79334229-79334248 | MS.gene30992:intron | 55.0% |
| !! | CAGCGATTTGAGAAGTGCCG+AGG | - | chr3.3:79334689-79334708 | None:intergenic | 55.0% |
| !! | GATCGGAGGCATCTTTGGCA+TGG | + | chr3.3:79334394-79334413 | MS.gene30992:CDS | 55.0% |
| AGTGATTCAGCCGGTGGCTC+AGG | - | chr3.3:79333655-79333674 | None:intergenic | 60.0% | |
| CACGGTTCGAAGGCCATCCT+CGG | + | chr3.3:79334669-79334688 | MS.gene30992:CDS | 60.0% | |
| CCTGCAGTCCGGTCTGTGAT+CGG | + | chr3.3:79334377-79334396 | MS.gene30992:CDS | 60.0% | |
| GCTCTTCGGCTCTGCTGCAT+GGG | + | chr3.3:79332670-79332689 | MS.gene30992:CDS | 60.0% | |
| ! | CTTTGTTTGGCCTGGGTGCC+GGG | + | chr3.3:79333383-79333402 | MS.gene30992:CDS | 60.0% |
| ! | GGGTCTCATTGGCTGGTGGA+TGG | + | chr3.3:79333408-79333427 | MS.gene30992:CDS | 60.0% |
| !! | GCTTTGTTTGGCCTGGGTGC+CGG | + | chr3.3:79333382-79333401 | MS.gene30992:CDS | 60.0% |
| CCAGCCAATGAGACCCTGCC+CGG | - | chr3.3:79333404-79333423 | None:intergenic | 65.0% | |
| CCGATCACAGACCGGACTGC+AGG | - | chr3.3:79334380-79334399 | None:intergenic | 65.0% | |
| GCAGTCCGGTCTGTGATCGG+AGG | + | chr3.3:79334380-79334399 | MS.gene30992:CDS | 65.0% | |
| GGCTCTTCGGCTCTGCTGCA+TGG | + | chr3.3:79332669-79332688 | MS.gene30992:CDS | 65.0% | |
| ! | GGCAGGGTCTCATTGGCTGG+TGG | + | chr3.3:79333404-79333423 | MS.gene30992:CDS | 65.0% |
| CCGGGCAGGGTCTCATTGGC+TGG | + | chr3.3:79333401-79333420 | MS.gene30992:CDS | 70.0% | |
| CGTATGTGGGGGAGGGCCCT+TGG | + | chr3.3:79333283-79333302 | MS.gene30992:CDS | 70.0% | |
| ! | GGTGCCGGGCAGGGTCTCAT+TGG | + | chr3.3:79333397-79333416 | MS.gene30992:CDS | 70.0% |
| !! | TTTGGCCTGGGTGCCGGGCA+GGG | + | chr3.3:79333388-79333407 | MS.gene30992:CDS | 70.0% |
| TGAGACCCTGCCCGGCACCC+AGG | - | chr3.3:79333396-79333415 | None:intergenic | 75.0% | |
| !! | GTTTGGCCTGGGTGCCGGGC+AGG | + | chr3.3:79333387-79333406 | MS.gene30992:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 79331584 | 79334732 | 79331584 | ID=MS.gene30992 |
| chr3.3 | mRNA | 79331584 | 79334732 | 79331584 | ID=MS.gene30992.t1;Parent=MS.gene30992 |
| chr3.3 | exon | 79331584 | 79331775 | 79331584 | ID=MS.gene30992.t1.exon1;Parent=MS.gene30992.t1 |
| chr3.3 | CDS | 79331584 | 79331775 | 79331584 | ID=cds.MS.gene30992.t1;Parent=MS.gene30992.t1 |
| chr3.3 | exon | 79332566 | 79332846 | 79332566 | ID=MS.gene30992.t1.exon2;Parent=MS.gene30992.t1 |
| chr3.3 | CDS | 79332566 | 79332846 | 79332566 | ID=cds.MS.gene30992.t1;Parent=MS.gene30992.t1 |
| chr3.3 | exon | 79333222 | 79333447 | 79333222 | ID=MS.gene30992.t1.exon3;Parent=MS.gene30992.t1 |
| chr3.3 | CDS | 79333222 | 79333447 | 79333222 | ID=cds.MS.gene30992.t1;Parent=MS.gene30992.t1 |
| chr3.3 | exon | 79333535 | 79333780 | 79333535 | ID=MS.gene30992.t1.exon4;Parent=MS.gene30992.t1 |
| chr3.3 | CDS | 79333535 | 79333780 | 79333535 | ID=cds.MS.gene30992.t1;Parent=MS.gene30992.t1 |
| chr3.3 | exon | 79333893 | 79334003 | 79333893 | ID=MS.gene30992.t1.exon5;Parent=MS.gene30992.t1 |
| chr3.3 | CDS | 79333893 | 79334003 | 79333893 | ID=cds.MS.gene30992.t1;Parent=MS.gene30992.t1 |
| chr3.3 | exon | 79334296 | 79334427 | 79334296 | ID=MS.gene30992.t1.exon6;Parent=MS.gene30992.t1 |
| chr3.3 | CDS | 79334296 | 79334427 | 79334296 | ID=cds.MS.gene30992.t1;Parent=MS.gene30992.t1 |
| chr3.3 | exon | 79334562 | 79334732 | 79334562 | ID=MS.gene30992.t1.exon7;Parent=MS.gene30992.t1 |
| chr3.3 | CDS | 79334562 | 79334732 | 79334562 | ID=cds.MS.gene30992.t1;Parent=MS.gene30992.t1 |
| Gene Sequence |
| Protein sequence |
