Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31020.t1 | XP_024633973.1 | 96.9 | 225 | 5 | 1 | 1 | 223 | 1 | 225 | 1.60E-84 | 322.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31020.t1 | Q99JH1 | 33.1 | 136 | 82 | 2 | 1 | 127 | 1 | 136 | 1.3e-13 | 78.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31020.t1 | G7JAD9 | 95.9 | 220 | 7 | 1 | 1 | 218 | 1 | 220 | 1.5e-79 | 305.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049342 | MS.gene31020 | 0.882566 | 9.36E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31020.t1 | MTR_3g095250 | 97.333 | 225 | 4 | 1 | 1 | 223 | 1 | 225 | 4.59e-156 | 434 |
| MS.gene31020.t1 | MTR_3g095260 | 93.548 | 217 | 14 | 0 | 1 | 217 | 1 | 217 | 1.01e-113 | 328 |
| MS.gene31020.t1 | MTR_3g095240 | 94.595 | 222 | 12 | 0 | 1 | 222 | 1 | 222 | 5.60e-112 | 323 |
| MS.gene31020.t1 | MTR_7g059030 | 66.197 | 142 | 48 | 0 | 1 | 142 | 1 | 142 | 1.05e-61 | 199 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31020.t1 | AT1G76010 | 74.324 | 148 | 37 | 1 | 1 | 147 | 1 | 148 | 2.58e-69 | 218 |
| MS.gene31020.t1 | AT1G76010 | 74.324 | 148 | 37 | 1 | 1 | 147 | 1 | 148 | 2.58e-69 | 218 |
| MS.gene31020.t1 | AT1G20220 | 72.297 | 148 | 40 | 1 | 1 | 147 | 1 | 148 | 3.47e-69 | 217 |
| MS.gene31020.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 6.81e-57 | 189 |
| MS.gene31020.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 1.26e-56 | 187 |
| MS.gene31020.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 1.26e-56 | 187 |
| MS.gene31020.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 1.27e-56 | 187 |
| MS.gene31020.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 1.52e-56 | 187 |
Find 97 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTTCATATTCATTTAA+AGG | 0.086684 | 3.3:-79052552 | None:intergenic |
| TTGTTCTTCAAGTTACTTTA+TGG | 0.152225 | 3.3:+79053341 | MS.gene31020:CDS |
| AGGGGAAGGGGAAGAGGCAG+AGG | 0.291828 | 3.3:+79052716 | MS.gene31020:CDS |
| GGAGAGGGCGTGGCCGTGCA+TGG | 0.319914 | 3.3:+79052943 | MS.gene31020:CDS |
| CGTGGTCGTGGAAGGGGAAG+GGG | 0.335964 | 3.3:+79052704 | MS.gene31020:CDS |
| TTAATAGGACCATCTGCTTT+GGG | 0.347764 | 3.3:-79049801 | None:intergenic |
| AGGGGACGTGGTCGTGGAAG+GGG | 0.353214 | 3.3:+79052698 | MS.gene31020:CDS |
| TGTTCTTCAAGTTACTTTAT+GGG | 0.354883 | 3.3:+79053342 | MS.gene31020:CDS |
| GATGGTGGGCGTGGCTATGG+TGG | 0.359549 | 3.3:+79052921 | MS.gene31020:CDS |
| GTTAATAGGACCATCTGCTT+TGG | 0.361171 | 3.3:-79049802 | None:intergenic |
| AGAGGGCGTGGCCGTGCATG+GGG | 0.361672 | 3.3:+79052945 | MS.gene31020:CDS |
| GAGAGGGCGTGGCCGTGCAT+GGG | 0.365848 | 3.3:+79052944 | MS.gene31020:CDS |
| CGTGGAAGGGGAAGGGGAAG+AGG | 0.371174 | 3.3:+79052710 | MS.gene31020:CDS |
| GGGCGTGGCTATGGTGGGAG+AGG | 0.374962 | 3.3:+79052927 | MS.gene31020:CDS |
| TATGTTGATGGTTGGGATGG+TGG | 0.386278 | 3.3:+79052906 | MS.gene31020:CDS |
| CGGGGAAGGGGACGTGGTCG+TGG | 0.399175 | 3.3:+79052692 | MS.gene31020:CDS |
| TGGGATGGTGGGCGTGGCTA+TGG | 0.399719 | 3.3:+79052918 | MS.gene31020:CDS |
| TCACCAAGGATGCGGGGAAG+GGG | 0.402471 | 3.3:+79052680 | MS.gene31020:CDS |
| AATGATTACTGAGCTAATAA+AGG | 0.402789 | 3.3:+79051185 | MS.gene31020:CDS |
| TCTTTGTAGGAATGTACAAC+GGG | 0.405671 | 3.3:+79052874 | MS.gene31020:intron |
| CGTCCCCTTCCCCGCATCCT+TGG | 0.406715 | 3.3:-79052683 | None:intergenic |
| CGTGGAAGGGGAAGAGGCCG+TGG | 0.411358 | 3.3:+79053541 | MS.gene31020:CDS |
| GCTCACCAAGGATGCGGGGA+AGG | 0.414294 | 3.3:+79052678 | MS.gene31020:CDS |
| GGCTATGGTGCCGAGCCAGC+TGG | 0.421056 | 3.3:+79052993 | MS.gene31020:CDS |
| GGCTATGGTGGGAGAGGGCG+TGG | 0.430657 | 3.3:+79052933 | MS.gene31020:CDS |
| CGAGGTCGTGGAAGGGGAAG+AGG | 0.435315 | 3.3:+79053535 | MS.gene31020:CDS |
| CTCACCAAGGATGCGGGGAA+GGG | 0.452582 | 3.3:+79052679 | MS.gene31020:CDS |
| TTCTAGTGGTTCCCATGTGT+CGG | 0.457367 | 3.3:-79051342 | None:intergenic |
| CTTTGGGCTTCTCCACCCTC+TGG | 0.471088 | 3.3:-79049785 | None:intergenic |
| TATGGAATATGTTGATGGTT+GGG | 0.476537 | 3.3:+79052899 | MS.gene31020:CDS |
| ATGTTGATGGTTGGGATGGT+GGG | 0.479792 | 3.3:+79052907 | MS.gene31020:CDS |
| GATATTGTTCTCAAAGCAAT+GGG | 0.480076 | 3.3:+79051141 | MS.gene31020:CDS |
| GAAGGGGACGTGGTCGTGGA+AGG | 0.482806 | 3.3:+79052696 | MS.gene31020:CDS |
| TTGTTTCAGAGAAGGATTGT+TGG | 0.483573 | 3.3:+79051281 | MS.gene31020:intron |
| AGGATGCGGGGAAGGGGACG+TGG | 0.483720 | 3.3:+79052686 | MS.gene31020:CDS |
| ACGTGGTCGTGGAAGGGGAA+GGG | 0.484751 | 3.3:+79052703 | MS.gene31020:CDS |
| GAGGGCGTGGCCGTGCATGG+GGG | 0.485482 | 3.3:+79052946 | MS.gene31020:CDS |
| TGATTTGCAGGCCGAGGTCG+TGG | 0.487512 | 3.3:+79053523 | MS.gene31020:intron |
| AGAAGGCTCACCAAGGATGC+GGG | 0.490809 | 3.3:+79052673 | MS.gene31020:intron |
| GATGGTTGGGATGGTGGGCG+TGG | 0.494870 | 3.3:+79052912 | MS.gene31020:CDS |
| GCAGGCCGAGGTCGTGGAAG+GGG | 0.495379 | 3.3:+79053529 | MS.gene31020:intron |
| TACTTTGTCAAAGAAAGAGC+TGG | 0.498781 | 3.3:+79051511 | MS.gene31020:CDS |
| AAGGGGACGTGGTCGTGGAA+GGG | 0.500013 | 3.3:+79052697 | MS.gene31020:CDS |
| CGGGGACGAGGACGTGGCTA+TGG | 0.506197 | 3.3:+79052978 | MS.gene31020:CDS |
| ACAATAAGGCTTACGGAAGA+AGG | 0.511182 | 3.3:-79051370 | None:intergenic |
| TGATATTGTTCTCAAAGCAA+TGG | 0.512237 | 3.3:+79051140 | MS.gene31020:CDS |
| GTCGTAATAGCCAGCTGGCT+CGG | 0.513060 | 3.3:-79053003 | None:intergenic |
| GCTTTCCGGGGACGAGGACG+TGG | 0.517005 | 3.3:+79052972 | MS.gene31020:CDS |
| CTCTTCCCCTTCCACGACCT+CGG | 0.520014 | 3.3:-79053534 | None:intergenic |
| TTGCAGGCCGAGGTCGTGGA+AGG | 0.520404 | 3.3:+79053527 | MS.gene31020:intron |
| ATGGTGGGCGTGGCTATGGT+GGG | 0.520794 | 3.3:+79052922 | MS.gene31020:CDS |
| TTTACTTGATCAGCTGGAAG+AGG | 0.521809 | 3.3:-79052528 | None:intergenic |
| GGGCGTGCTTTCCGGGGACG+AGG | 0.522548 | 3.3:+79052966 | MS.gene31020:CDS |
| CAGAAGGCTCACCAAGGATG+CGG | 0.522860 | 3.3:+79052672 | MS.gene31020:intron |
| CTTCATCAGATCACTCAAGT+TGG | 0.523359 | 3.3:+79051305 | MS.gene31020:CDS |
| GGCGTGGCTATGGTGGGAGA+GGG | 0.523757 | 3.3:+79052928 | MS.gene31020:CDS |
| CATAGCCACGTCCTCGTCCC+CGG | 0.531366 | 3.3:-79052977 | None:intergenic |
| GTATGGAATATGTTGATGGT+TGG | 0.536873 | 3.3:+79052898 | MS.gene31020:CDS |
| TTACTTGATCAGCTGGAAGA+GGG | 0.540318 | 3.3:-79052527 | None:intergenic |
| GCATGCTTACCACGTGGGGC+AGG | 0.543826 | 3.3:-79053047 | None:intergenic |
| GTTACTAACTTGAAAGAGAG+TGG | 0.545301 | 3.3:-79049883 | None:intergenic |
| CAACTGATATAACCGACACA+TGG | 0.550748 | 3.3:+79051330 | MS.gene31020:CDS |
| GGAAGAAGGCCTTCTTCTAG+TGG | 0.552927 | 3.3:-79051356 | None:intergenic |
| GACGTGGTCGTGGAAGGGGA+AGG | 0.557002 | 3.3:+79052702 | MS.gene31020:CDS |
| GAGCTGGATACATCGTCCAC+AGG | 0.559891 | 3.3:+79051527 | MS.gene31020:CDS |
| GTATATGATCTGTTAGAAGA+GGG | 0.572416 | 3.3:+79053599 | MS.gene31020:CDS |
| TGCTTACCACGTGGGGCAGG+TGG | 0.576085 | 3.3:-79053044 | None:intergenic |
| ACTTGATCAGCTGGAAGAGG+GGG | 0.580840 | 3.3:-79052525 | None:intergenic |
| TGTATATGATCTGTTAGAAG+AGG | 0.585445 | 3.3:+79053598 | MS.gene31020:CDS |
| CCATTGTCGTAATAGCCAGC+TGG | 0.586118 | 3.3:-79053008 | None:intergenic |
| TGCAGGCCGAGGTCGTGGAA+GGG | 0.587184 | 3.3:+79053528 | MS.gene31020:intron |
| ACCTTTAAATGAATATGAAG+AGG | 0.587328 | 3.3:+79052551 | MS.gene31020:CDS |
| GTGGAGAAGCCCAAAGCAGA+TGG | 0.588837 | 3.3:+79049792 | MS.gene31020:CDS |
| GAATATGTTGATGGTTGGGA+TGG | 0.589073 | 3.3:+79052903 | MS.gene31020:CDS |
| TTAAATGAATATGAAGAGGA+AGG | 0.589261 | 3.3:+79052555 | MS.gene31020:CDS |
| TTCTTTGTAGGAATGTACAA+CGG | 0.589457 | 3.3:+79052873 | MS.gene31020:intron |
| GACGTGCATGCTTACCACGT+GGG | 0.602578 | 3.3:-79053052 | None:intergenic |
| TACTTGATCAGCTGGAAGAG+GGG | 0.602987 | 3.3:-79052526 | None:intergenic |
| AACTGATATAACCGACACAT+GGG | 0.604286 | 3.3:+79051331 | MS.gene31020:CDS |
| GAGATTCGCATTACTACTCA+AGG | 0.605644 | 3.3:+79049831 | MS.gene31020:CDS |
| ACATGGGAACCACTAGAAGA+AGG | 0.607454 | 3.3:+79051347 | MS.gene31020:CDS |
| AATGAATATGAAGAGGAAGG+AGG | 0.612688 | 3.3:+79052558 | MS.gene31020:CDS |
| AGCTGGATACATCGTCCACA+GGG | 0.619803 | 3.3:+79051528 | MS.gene31020:CDS |
| GATGGATAGGTACCAGAGGG+TGG | 0.622819 | 3.3:+79049773 | None:intergenic |
| TCAGATGGATAGGTACCAGA+GGG | 0.640057 | 3.3:+79049770 | None:intergenic |
| CCAGCTGGCTATTACGACAA+TGG | 0.644520 | 3.3:+79053008 | MS.gene31020:CDS |
| ACGTGCATGCTTACCACGTG+GGG | 0.647806 | 3.3:-79053051 | None:intergenic |
| GAAGGCTCACCAAGGATGCG+GGG | 0.652887 | 3.3:+79052674 | MS.gene31020:intron |
| GTGATCAAGCAGCTGCTCCA+CGG | 0.655876 | 3.3:-79053558 | None:intergenic |
| TTCAGATGGATAGGTACCAG+AGG | 0.657142 | 3.3:+79049769 | None:intergenic |
| TATATGATCTGTTAGAAGAG+GGG | 0.664513 | 3.3:+79053600 | MS.gene31020:CDS |
| TTGATACAGAAGGCTCACCA+AGG | 0.680901 | 3.3:+79052666 | MS.gene31020:intron |
| ACTAACTTGAAAGAGAGTGG+TGG | 0.714485 | 3.3:-79049880 | None:intergenic |
| TTTGTAGGAATGTACAACGG+GGG | 0.715187 | 3.3:+79052876 | MS.gene31020:intron |
| TAACAAATAACTAAGCAGAG+AGG | 0.715612 | 3.3:-79053626 | None:intergenic |
| CTTTGTAGGAATGTACAACG+GGG | 0.715693 | 3.3:+79052875 | MS.gene31020:intron |
| GATGCACCACCTGCCCCACG+TGG | 0.716669 | 3.3:+79053038 | MS.gene31020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAGTTGATTAATAAA+TGG | - | chr3.3:79051070-79051089 | None:intergenic | 10.0% |
| !! | ATATATATAAATTATTTGAC+AGG | - | chr3.3:79051410-79051429 | None:intergenic | 10.0% |
| !! | TATATATAAATTATTTGACA+GGG | - | chr3.3:79051409-79051428 | None:intergenic | 10.0% |
| !!! | ATGATTATTTTAATAAAAAG+TGG | + | chr3.3:79051891-79051910 | MS.gene31020:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3.3:79050711-79050730 | MS.gene31020:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+TGG | + | chr3.3:79050711-79050730 | MS.gene31020:intron | 100.0% |
| !! | ATAAACAAACTTATTCTATA+TGG | - | chr3.3:79053151-79053170 | None:intergenic | 15.0% |
| !! | GAAATATTTATTATTTACAC+AGG | - | chr3.3:79050011-79050030 | None:intergenic | 15.0% |
| !! | GTAACATAATTTAATCAAAA+GGG | - | chr3.3:79052342-79052361 | None:intergenic | 15.0% |
| !! | TAACATAATTTAATCAAAAG+GGG | - | chr3.3:79052341-79052360 | None:intergenic | 15.0% |
| !! | TGTAACATAATTTAATCAAA+AGG | - | chr3.3:79052343-79052362 | None:intergenic | 15.0% |
| !!! | AATGTAAATGATAGTTTTAT+TGG | - | chr3.3:79051851-79051870 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAGAAACCATAAA+AGG | - | chr3.3:79052825-79052844 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTATGATTTGC+AGG | + | chr3.3:79053511-79053530 | MS.gene31020:intron | 15.0% |
| !!! | TTAAGAGCATAAATTTAATT+GGG | - | chr3.3:79049975-79049994 | None:intergenic | 15.0% |
| !! | AAATACAAATTAAGACAAAG+GGG | - | chr3.3:79052455-79052474 | None:intergenic | 20.0% |
| !! | AAGCATATAAAAGAAAATTG+TGG | - | chr3.3:79050033-79050052 | None:intergenic | 20.0% |
| !! | AATAAGATAAGGAAAACAAT+CGG | - | chr3.3:79053270-79053289 | None:intergenic | 20.0% |
| !! | CAAATACAAATTAAGACAAA+GGG | - | chr3.3:79052456-79052475 | None:intergenic | 20.0% |
| !! | TCAAATACAAATTAAGACAA+AGG | - | chr3.3:79052457-79052476 | None:intergenic | 20.0% |
| !! | TGATAATATCACAAATAAGA+GGG | - | chr3.3:79050316-79050335 | None:intergenic | 20.0% |
| !! | TTACTAAATTAATCTGTGAA+AGG | + | chr3.3:79050534-79050553 | MS.gene31020:intron | 20.0% |
| !!! | AACTTAAAGTTTTGAAGAAA+AGG | - | chr3.3:79053473-79053492 | None:intergenic | 20.0% |
| !!! | AACTTACATTTGTTTTTTGT+AGG | + | chr3.3:79051104-79051123 | MS.gene31020:intron | 20.0% |
| !!! | ATTTGTTTTTTGTAGGAAAA+AGG | + | chr3.3:79051111-79051130 | MS.gene31020:intron | 20.0% |
| !!! | ATTTTAATAAAAAGTGGTGT+GGG | + | chr3.3:79051897-79051916 | MS.gene31020:intron | 20.0% |
| !!! | ATTTTACAACAATTTTATGC+TGG | + | chr3.3:79050991-79051010 | MS.gene31020:intron | 20.0% |
| !!! | GTTAAGAGCATAAATTTAAT+TGG | - | chr3.3:79049976-79049995 | None:intergenic | 20.0% |
| !!! | TAAATGATAGTTTTATTGGT+GGG | - | chr3.3:79051847-79051866 | None:intergenic | 20.0% |
| !!! | TATTTTAATAAAAAGTGGTG+TGG | + | chr3.3:79051896-79051915 | MS.gene31020:intron | 20.0% |
| !!! | TCTTATTTGTGATATTATCA+CGG | + | chr3.3:79050316-79050335 | MS.gene31020:intron | 20.0% |
| ! | AAAATGCTATAGCCAAAATA+AGG | - | chr3.3:79050927-79050946 | None:intergenic | 25.0% |
| ! | AAGAGAGAAAAAACAAATAG+AGG | + | chr3.3:79050585-79050604 | MS.gene31020:intron | 25.0% |
| ! | AATATGCAAAACTAACTACT+CGG | - | chr3.3:79052747-79052766 | None:intergenic | 25.0% |
| ! | AATGATTACTGAGCTAATAA+AGG | + | chr3.3:79051185-79051204 | MS.gene31020:CDS | 25.0% |
| ! | ACAGACTGAAAATACATTTA+AGG | + | chr3.3:79050660-79050679 | MS.gene31020:intron | 25.0% |
| ! | ACCTTTAAATGAATATGAAG+AGG | + | chr3.3:79052551-79052570 | MS.gene31020:CDS | 25.0% |
| ! | AGAGAGAAAAAACAAATAGA+GGG | + | chr3.3:79050586-79050605 | MS.gene31020:intron | 25.0% |
| ! | ATGCATTTATACATAACAAC+TGG | - | chr3.3:79053096-79053115 | None:intergenic | 25.0% |
| ! | CTGGTATTAATCAAATTTGA+TGG | - | chr3.3:79053077-79053096 | None:intergenic | 25.0% |
| ! | CTTATTTGTGATATTATCAC+GGG | + | chr3.3:79050317-79050336 | MS.gene31020:intron | 25.0% |
| ! | GATAAGATTTGATACCATAT+AGG | + | chr3.3:79050825-79050844 | MS.gene31020:intron | 25.0% |
| ! | GGAAACTAACAAATAAGATA+AGG | - | chr3.3:79053281-79053300 | None:intergenic | 25.0% |
| ! | GTGAAAACTTATGATCATTA+TGG | + | chr3.3:79052616-79052635 | MS.gene31020:intron | 25.0% |
| ! | GTGATAATATCACAAATAAG+AGG | - | chr3.3:79050317-79050336 | None:intergenic | 25.0% |
| ! | TATAAAATGCTTAAACGAGA+AGG | - | chr3.3:79053320-79053339 | None:intergenic | 25.0% |
| ! | TCCTCTTCATATTCATTTAA+AGG | - | chr3.3:79052555-79052574 | None:intergenic | 25.0% |
| ! | TCTACACAATAATTCTTTGT+AGG | + | chr3.3:79052861-79052880 | MS.gene31020:intron | 25.0% |
| ! | TTAAATGAATATGAAGAGGA+AGG | + | chr3.3:79052555-79052574 | MS.gene31020:CDS | 25.0% |
| ! | TTTGCATATTTAACTGCAAT+TGG | + | chr3.3:79052757-79052776 | MS.gene31020:intron | 25.0% |
| ! | TTTGTATTTGACATTTCTGT+TGG | + | chr3.3:79052466-79052485 | MS.gene31020:intron | 25.0% |
| !! | AAAGGTTCAAGAAAGATTTT+CGG | - | chr3.3:79052807-79052826 | None:intergenic | 25.0% |
| !! | AATCTTTCTTGAACCTTTTA+TGG | + | chr3.3:79052809-79052828 | MS.gene31020:intron | 25.0% |
| !! | ACATTAGAACTTTCTCATTT+TGG | - | chr3.3:79052308-79052327 | None:intergenic | 25.0% |
| !! | ATTTAAGACCTCAAAATTGA+GGG | - | chr3.3:79051719-79051738 | None:intergenic | 25.0% |
| !! | CTTCTCTAGTTTGATTTAAT+AGG | - | chr3.3:79053225-79053244 | None:intergenic | 25.0% |
| !! | GGGATATTATGTTTGAAATA+AGG | - | chr3.3:79052396-79052415 | None:intergenic | 25.0% |
| !! | TGGGACTATTATATTTTGTT+TGG | + | chr3.3:79051017-79051036 | MS.gene31020:intron | 25.0% |
| !! | TGTTCTTCAAGTTACTTTAT+GGG | + | chr3.3:79053342-79053361 | MS.gene31020:CDS | 25.0% |
| !! | TTGTTCTTCAAGTTACTTTA+TGG | + | chr3.3:79053341-79053360 | MS.gene31020:CDS | 25.0% |
| !! | TTTTAATAAAAAGTGGTGTG+GGG | + | chr3.3:79051898-79051917 | MS.gene31020:intron | 25.0% |
| !!! | AACAATTTTATGCTGGTTTT+GGG | + | chr3.3:79050998-79051017 | MS.gene31020:intron | 25.0% |
| !!! | AACAGTATTTTTGATACAGA+AGG | + | chr3.3:79052656-79052675 | MS.gene31020:intron | 25.0% |
| !!! | GGACTATTATATTTTGTTTG+GGG | + | chr3.3:79051019-79051038 | MS.gene31020:intron | 25.0% |
| !!! | GGGACTATTATATTTTGTTT+GGG | + | chr3.3:79051018-79051037 | MS.gene31020:intron | 25.0% |
| !!! | GTAAATGATAGTTTTATTGG+TGG | - | chr3.3:79051848-79051867 | None:intergenic | 25.0% |
| !!! | TCAATTTTGAGGTCTTAAAT+GGG | + | chr3.3:79051719-79051738 | MS.gene31020:intron | 25.0% |
| AAAAAAGTGATGTGTACATG+TGG | - | chr3.3:79051747-79051766 | None:intergenic | 30.0% | |
| AAAAAGTGATGTGTACATGT+GGG | - | chr3.3:79051746-79051765 | None:intergenic | 30.0% | |
| AGTGACAAGTACAAGAAAAT+AGG | + | chr3.3:79050622-79050641 | MS.gene31020:intron | 30.0% | |
| ATACTATCTATAGGCAATGT+GGG | + | chr3.3:79050869-79050888 | MS.gene31020:intron | 30.0% | |
| ATAGATAGTATCTAGTAAGC+CGG | - | chr3.3:79050860-79050879 | None:intergenic | 30.0% | |
| CACACATCAAAATATTTGAC+TGG | - | chr3.3:79053180-79053199 | None:intergenic | 30.0% | |
| CTCTAACAAAAGGTCTAAAT+GGG | + | chr3.3:79051820-79051839 | MS.gene31020:intron | 30.0% | |
| GAGAATATACCTTTCATCAA+GGG | + | chr3.3:79050211-79050230 | MS.gene31020:intron | 30.0% | |
| GATATCTCTATGCAGAAAAT+TGG | + | chr3.3:79051218-79051237 | MS.gene31020:intron | 30.0% | |
| GATATTGTTCTCAAAGCAAT+GGG | + | chr3.3:79051141-79051160 | MS.gene31020:CDS | 30.0% | |
| GCTTACTAGATACTATCTAT+AGG | + | chr3.3:79050860-79050879 | MS.gene31020:intron | 30.0% | |
| GTATATGATCTGTTAGAAGA+GGG | + | chr3.3:79053599-79053618 | MS.gene31020:CDS | 30.0% | |
| TAAATGCTTGTCAAGTCATT+GGG | + | chr3.3:79050691-79050710 | MS.gene31020:intron | 30.0% | |
| TAAATGGATATTTGCATGCA+TGG | - | chr3.3:79051054-79051073 | None:intergenic | 30.0% | |
| TAACAAATAACTAAGCAGAG+AGG | - | chr3.3:79053629-79053648 | None:intergenic | 30.0% | |
| TATATGATCTGTTAGAAGAG+GGG | + | chr3.3:79053600-79053619 | MS.gene31020:CDS | 30.0% | |
| TGAGAATATACCTTTCATCA+AGG | + | chr3.3:79050210-79050229 | MS.gene31020:intron | 30.0% | |
| TGATATTGTTCTCAAAGCAA+TGG | + | chr3.3:79051140-79051159 | MS.gene31020:CDS | 30.0% | |
| TGTATATGATCTGTTAGAAG+AGG | + | chr3.3:79053598-79053617 | MS.gene31020:CDS | 30.0% | |
| TTCTTTGTAGGAATGTACAA+CGG | + | chr3.3:79052873-79052892 | MS.gene31020:intron | 30.0% | |
| ! | ATCATTGATATTTTGCGTGT+CGG | + | chr3.3:79050384-79050403 | MS.gene31020:intron | 30.0% |
| ! | CAAATCTCACAAAAGTACAA+CGG | - | chr3.3:79052139-79052158 | None:intergenic | 30.0% |
| ! | CAAGCTTTATAATACTCATG+AGG | + | chr3.3:79052361-79052380 | MS.gene31020:intron | 30.0% |
| ! | CATTTAAGACCTCAAAATTG+AGG | - | chr3.3:79051720-79051739 | None:intergenic | 30.0% |
| ! | CATTTAGACCTTTTGTTAGA+GGG | - | chr3.3:79051821-79051840 | None:intergenic | 30.0% |
| ! | GAACTTTCTCATTTTGGATT+TGG | - | chr3.3:79052302-79052321 | None:intergenic | 30.0% |
| ! | TTGTACTTTTGTGAGATTTG+TGG | + | chr3.3:79052139-79052158 | MS.gene31020:intron | 30.0% |
| !! | TATGGAATATGTTGATGGTT+GGG | + | chr3.3:79052899-79052918 | MS.gene31020:CDS | 30.0% |
| !!! | CAACAATTTTATGCTGGTTT+TGG | + | chr3.3:79050997-79051016 | MS.gene31020:intron | 30.0% |
| !!! | CCTCTAGTTTTTTAGAAACT+GGG | - | chr3.3:79052416-79052435 | None:intergenic | 30.0% |
| !!! | CTCAATTTTGAGGTCTTAAA+TGG | + | chr3.3:79051718-79051737 | MS.gene31020:intron | 30.0% |
| AAATGCTTGTCAAGTCATTG+GGG | + | chr3.3:79050692-79050711 | MS.gene31020:intron | 35.0% | |
| AACCCAAAAGCAATGTGATT+AGG | - | chr3.3:79049938-79049957 | None:intergenic | 35.0% | |
| AACTGATATAACCGACACAT+GGG | + | chr3.3:79051331-79051350 | MS.gene31020:CDS | 35.0% | |
| AAGATAAGGAAAACAATCGG+TGG | - | chr3.3:79053267-79053286 | None:intergenic | 35.0% | |
| AATGAATATGAAGAGGAAGG+AGG | + | chr3.3:79052558-79052577 | MS.gene31020:CDS | 35.0% | |
| ACCTTTATAGGTGACATGTT+GGG | + | chr3.3:79050240-79050259 | MS.gene31020:intron | 35.0% | |
| ACTGAGCAAGTAAAACACAA+CGG | - | chr3.3:79051456-79051475 | None:intergenic | 35.0% | |
| ACTGAGCTAATAAAGGTAAG+AGG | + | chr3.3:79051192-79051211 | MS.gene31020:intron | 35.0% | |
| AGACGAAACAATAAGGCTTA+CGG | - | chr3.3:79051380-79051399 | None:intergenic | 35.0% | |
| AGATAAGGAAAACAATCGGT+GGG | - | chr3.3:79053266-79053285 | None:intergenic | 35.0% | |
| ATATACCTTTCATCAAGGGT+TGG | + | chr3.3:79050215-79050234 | MS.gene31020:intron | 35.0% | |
| CCTCTAACAAAAGGTCTAAA+TGG | + | chr3.3:79051819-79051838 | MS.gene31020:intron | 35.0% | |
| CTAAATGCTTGTCAAGTCAT+TGG | + | chr3.3:79050690-79050709 | MS.gene31020:intron | 35.0% | |
| CTGAGCTAATAAAGGTAAGA+GGG | + | chr3.3:79051193-79051212 | MS.gene31020:intron | 35.0% | |
| GAAGGTAACACAAGATACAA+AGG | - | chr3.3:79053302-79053321 | None:intergenic | 35.0% | |
| GATACTATCTATAGGCAATG+TGG | + | chr3.3:79050868-79050887 | MS.gene31020:intron | 35.0% | |
| GCCTATTGAGAGATAAGATA+AGG | - | chr3.3:79051615-79051634 | None:intergenic | 35.0% | |
| GCCTTATCTTATCTCTCAAT+AGG | + | chr3.3:79051611-79051630 | MS.gene31020:intron | 35.0% | |
| GTAGCATAGACGAAACAATA+AGG | - | chr3.3:79051387-79051406 | None:intergenic | 35.0% | |
| GTTACTAACTTGAAAGAGAG+TGG | - | chr3.3:79049886-79049905 | None:intergenic | 35.0% | |
| TACCACAAAAAGTAACACAG+TGG | - | chr3.3:79052196-79052215 | None:intergenic | 35.0% | |
| TACTTTGTCAAAGAAAGAGC+TGG | + | chr3.3:79051511-79051530 | MS.gene31020:CDS | 35.0% | |
| TCTCTATGCAGAAAATTGGT+TGG | + | chr3.3:79051222-79051241 | MS.gene31020:intron | 35.0% | |
| TCTTTGTAGGAATGTACAAC+GGG | + | chr3.3:79052874-79052893 | MS.gene31020:intron | 35.0% | |
| TGCTTATGAAACGAACTACT+AGG | - | chr3.3:79051683-79051702 | None:intergenic | 35.0% | |
| TGGTAGTCTTTGTAGTGTTT+CGG | - | chr3.3:79050423-79050442 | None:intergenic | 35.0% | |
| TTAAGAACCCCATTCTTAAG+TGG | - | chr3.3:79051925-79051944 | None:intergenic | 35.0% | |
| TTAATAGGACCATCTGCTTT+GGG | - | chr3.3:79049804-79049823 | None:intergenic | 35.0% | |
| TTGTTTCAGAGAAGGATTGT+TGG | + | chr3.3:79051281-79051300 | MS.gene31020:intron | 35.0% | |
| ! | AAAGGTTTTACTTGATCAGC+TGG | - | chr3.3:79052537-79052556 | None:intergenic | 35.0% |
| ! | ATTGGACTAGGTGGATAATA+CGG | + | chr3.3:79050778-79050797 | MS.gene31020:intron | 35.0% |
| ! | CCATTTAGACCTTTTGTTAG+AGG | - | chr3.3:79051822-79051841 | None:intergenic | 35.0% |
| ! | CCCAGTTTCTAAAAAACTAG+AGG | + | chr3.3:79052413-79052432 | MS.gene31020:intron | 35.0% |
| ! | CGAATCTCGTTTTCGTTAAT+AGG | - | chr3.3:79049819-79049838 | None:intergenic | 35.0% |
| ! | TCATTGATATTTTGCGTGTC+GGG | + | chr3.3:79050385-79050404 | MS.gene31020:intron | 35.0% |
| ! | TGTGTTTTACTTGCTCAGTT+TGG | + | chr3.3:79051457-79051476 | MS.gene31020:intron | 35.0% |
| ! | TTTTGTGAGATTTGTGGTCA+CGG | + | chr3.3:79052145-79052164 | MS.gene31020:intron | 35.0% |
| !! | GTATGGAATATGTTGATGGT+TGG | + | chr3.3:79052898-79052917 | MS.gene31020:CDS | 35.0% |
| !!! | GCCTCTAGTTTTTTAGAAAC+TGG | - | chr3.3:79052417-79052436 | None:intergenic | 35.0% |
| !!! | GCTGTTACTTTAGGCTTTTA+AGG | + | chr3.3:79050163-79050182 | MS.gene31020:intron | 35.0% |
| !!! | TTCCACTGTGTTACTTTTTG+TGG | + | chr3.3:79052191-79052210 | MS.gene31020:intron | 35.0% |
| AAAATTGAGGGTCTCCATTG+TGG | - | chr3.3:79051707-79051726 | None:intergenic | 40.0% | |
| AATGCTTGTCAAGTCATTGG+GGG | + | chr3.3:79050693-79050712 | MS.gene31020:intron | 40.0% | |
| AATGGAGACCCTCTAACAAA+AGG | + | chr3.3:79051810-79051829 | MS.gene31020:intron | 40.0% | |
| ACAATAAGGCTTACGGAAGA+AGG | - | chr3.3:79051373-79051392 | None:intergenic | 40.0% | |
| ACCATATAGGATTTCCCATC+CGG | + | chr3.3:79050838-79050857 | MS.gene31020:intron | 40.0% | |
| ACCCAACATGTCACCTATAA+AGG | - | chr3.3:79050244-79050263 | None:intergenic | 40.0% | |
| ACTAACTTGAAAGAGAGTGG+TGG | - | chr3.3:79049883-79049902 | None:intergenic | 40.0% | |
| ATAGTATCTAGTAAGCCGGA+TGG | - | chr3.3:79050856-79050875 | None:intergenic | 40.0% | |
| CAACTGATATAACCGACACA+TGG | + | chr3.3:79051330-79051349 | MS.gene31020:CDS | 40.0% | |
| CCAAAAAATTTCCCCAATGG+GGG | + | chr3.3:79051972-79051991 | MS.gene31020:intron | 40.0% | |
| CCCAAAAAATTTCCCCAATG+GGG | + | chr3.3:79051971-79051990 | MS.gene31020:intron | 40.0% | |
| CCCCAAAAAATTTCCCCAAT+GGG | + | chr3.3:79051970-79051989 | MS.gene31020:intron | 40.0% | |
| CGTTTCATAAGCATCCACAA+TGG | + | chr3.3:79051690-79051709 | MS.gene31020:intron | 40.0% | |
| CTGAGCAAGTAAAACACAAC+GGG | - | chr3.3:79051455-79051474 | None:intergenic | 40.0% | |
| CTGTCTACTTGTTTCAGAGA+AGG | + | chr3.3:79051273-79051292 | MS.gene31020:intron | 40.0% | |
| CTTCATCAGATCACTCAAGT+TGG | + | chr3.3:79051305-79051324 | MS.gene31020:CDS | 40.0% | |
| CTTTGTAGGAATGTACAACG+GGG | + | chr3.3:79052875-79052894 | MS.gene31020:intron | 40.0% | |
| GACCTTTATAGGTGACATGT+TGG | + | chr3.3:79050239-79050258 | MS.gene31020:intron | 40.0% | |
| GAGATTCGCATTACTACTCA+AGG | + | chr3.3:79049831-79049850 | MS.gene31020:CDS | 40.0% | |
| GGAGTGGTTGAGTACTTATT+AGG | - | chr3.3:79051790-79051809 | None:intergenic | 40.0% | |
| GGATATTTGCATGCATGGAA+TGG | - | chr3.3:79051049-79051068 | None:intergenic | 40.0% | |
| GTACTTTAGACCATCTCCAA+TGG | - | chr3.3:79052037-79052056 | None:intergenic | 40.0% | |
| GTTAATAGGACCATCTGCTT+TGG | - | chr3.3:79049805-79049824 | None:intergenic | 40.0% | |
| TAAGTACTCAACCACTCCAA+TGG | + | chr3.3:79051792-79051811 | MS.gene31020:intron | 40.0% | |
| TAGTATCTAGTAAGCCGGAT+GGG | - | chr3.3:79050855-79050874 | None:intergenic | 40.0% | |
| TCATGAAAGTTCATACCCTG+TGG | - | chr3.3:79051546-79051565 | None:intergenic | 40.0% | |
| TGAACGCGATGTTGTCTATT+TGG | + | chr3.3:79050357-79050376 | MS.gene31020:intron | 40.0% | |
| TGATTGAATGCGACACAAGA+CGG | + | chr3.3:79050139-79050158 | MS.gene31020:intron | 40.0% | |
| TTACTTGATCAGCTGGAAGA+GGG | - | chr3.3:79052530-79052549 | None:intergenic | 40.0% | |
| TTCAGTCTGTCTGTCTATCT+AGG | - | chr3.3:79050650-79050669 | None:intergenic | 40.0% | |
| TTTACTTGATCAGCTGGAAG+AGG | - | chr3.3:79052531-79052550 | None:intergenic | 40.0% | |
| TTTGTAGGAATGTACAACGG+GGG | + | chr3.3:79052876-79052895 | MS.gene31020:intron | 40.0% | |
| ! | AATGGAGACCCTCAATTTTG+AGG | + | chr3.3:79051708-79051727 | MS.gene31020:intron | 40.0% |
| ! | ACGCCTAATCACATTGCTTT+TGG | + | chr3.3:79049932-79049951 | MS.gene31020:intron | 40.0% |
| ! | TGAGACAGTTATTAGGTTGC+CGG | + | chr3.3:79050266-79050285 | MS.gene31020:intron | 40.0% |
| ! | TTATTAGGTTGCCGGTAATC+TGG | + | chr3.3:79050274-79050293 | MS.gene31020:intron | 40.0% |
| ! | TTTAAGACCCGGTACCTAAT+AGG | - | chr3.3:79052000-79052019 | None:intergenic | 40.0% |
| ! | TTTTGTTAGAGGGTCTCCAT+TGG | - | chr3.3:79051811-79051830 | None:intergenic | 40.0% |
| !! | AAAATAAGGAAGTGCTGCAG+GGG | - | chr3.3:79050913-79050932 | None:intergenic | 40.0% |
| !! | ATTAGGTACCGGGTCTTAAA+TGG | + | chr3.3:79052000-79052019 | MS.gene31020:intron | 40.0% |
| !! | CAAAATAAGGAAGTGCTGCA+GGG | - | chr3.3:79050914-79050933 | None:intergenic | 40.0% |
| !! | CGCCTAATCACATTGCTTTT+GGG | + | chr3.3:79049933-79049952 | MS.gene31020:intron | 40.0% |
| !! | GAATATGTTGATGGTTGGGA+TGG | + | chr3.3:79052903-79052922 | MS.gene31020:CDS | 40.0% |
| !! | TGGGTTCTGAGACAGTTATT+AGG | + | chr3.3:79050259-79050278 | MS.gene31020:intron | 40.0% |
| !! | TTTTTATGATTTGCAGGCCG+AGG | + | chr3.3:79053517-79053536 | MS.gene31020:intron | 40.0% |
| !!! | CATTGGGGAAATTTTTTGGG+GGG | - | chr3.3:79051971-79051990 | None:intergenic | 40.0% |
| !!! | CCATTGGGGAAATTTTTTGG+GGG | - | chr3.3:79051972-79051991 | None:intergenic | 40.0% |
| !!! | CCCATTGGGGAAATTTTTTG+GGG | - | chr3.3:79051973-79051992 | None:intergenic | 40.0% |
| !!! | CCCCATTGGGGAAATTTTTT+GGG | - | chr3.3:79051974-79051993 | None:intergenic | 40.0% |
| AATGGTGAAGACCTCACCAT+TGG | + | chr3.3:79052018-79052037 | MS.gene31020:intron | 45.0% | |
| ACATCGCGTTCAGCAATACA+CGG | - | chr3.3:79050349-79050368 | None:intergenic | 45.0% | |
| ACATGGGAACCACTAGAAGA+AGG | + | chr3.3:79051347-79051366 | MS.gene31020:CDS | 45.0% | |
| ACCTAATAGGTACCCCCATT+GGG | - | chr3.3:79051987-79052006 | None:intergenic | 45.0% | |
| ACTGAGGCTGTTGTCTTCAA+AGG | - | chr3.3:79050119-79050138 | None:intergenic | 45.0% | |
| ATGCTTGTCAAGTCATTGGG+GGG | + | chr3.3:79050694-79050713 | MS.gene31020:intron | 45.0% | |
| CAAGGGTTGGAGACCTTTAT+AGG | + | chr3.3:79050228-79050247 | MS.gene31020:intron | 45.0% | |
| CCCCCAAAAAATTTCCCCAA+TGG | + | chr3.3:79051969-79051988 | MS.gene31020:intron | 45.0% | |
| CGCGATGTTGTCTATTTGGT+TGG | + | chr3.3:79050361-79050380 | MS.gene31020:intron | 45.0% | |
| CTGAGGCTGTTGTCTTCAAA+GGG | - | chr3.3:79050118-79050137 | None:intergenic | 45.0% | |
| GACTAGGTGGATAATACGGT+GGG | + | chr3.3:79050782-79050801 | MS.gene31020:intron | 45.0% | |
| GTGTCGCATTCAATCAACTG+AGG | - | chr3.3:79050135-79050154 | None:intergenic | 45.0% | |
| TACCTAATAGGTACCCCCAT+TGG | - | chr3.3:79051988-79052007 | None:intergenic | 45.0% | |
| TACTTGATCAGCTGGAAGAG+GGG | - | chr3.3:79052529-79052548 | None:intergenic | 45.0% | |
| TCTATAGGCAATGTGGGACT+TGG | + | chr3.3:79050875-79050894 | MS.gene31020:intron | 45.0% | |
| TCTATATGGCAGCACACAAC+TGG | - | chr3.3:79053137-79053156 | None:intergenic | 45.0% | |
| TGTGGGGTCCACTTAAGAAT+GGG | + | chr3.3:79051914-79051933 | MS.gene31020:intron | 45.0% | |
| TTAGACCATCTCCAATGGTG+AGG | - | chr3.3:79052032-79052051 | None:intergenic | 45.0% | |
| TTCTAGTGGTTCCCATGTGT+CGG | - | chr3.3:79051345-79051364 | None:intergenic | 45.0% | |
| TTGATACAGAAGGCTCACCA+AGG | + | chr3.3:79052666-79052685 | MS.gene31020:intron | 45.0% | |
| ! | ATATTTTGCGTGTCGGGTCT+TGG | + | chr3.3:79050391-79050410 | MS.gene31020:intron | 45.0% |
| ! | CTCACAAAAGTACAACGGCT+AGG | - | chr3.3:79052134-79052153 | None:intergenic | 45.0% |
| ! | GGGGGTATGGAATATGTTGA+TGG | + | chr3.3:79052894-79052913 | MS.gene31020:CDS | 45.0% |
| ! | GGTCTTCACCATTTAAGACC+CGG | - | chr3.3:79052011-79052030 | None:intergenic | 45.0% |
| !! | ATGTTGATGGTTGGGATGGT+GGG | + | chr3.3:79052907-79052926 | MS.gene31020:CDS | 45.0% |
| !! | CCAAAATAAGGAAGTGCTGC+AGG | - | chr3.3:79050915-79050934 | None:intergenic | 45.0% |
| !! | CCTGCAGCACTTCCTTATTT+TGG | + | chr3.3:79050912-79050931 | MS.gene31020:intron | 45.0% |
| !! | GGCTTTTAAGGAGAGTCTAG+AGG | + | chr3.3:79050175-79050194 | MS.gene31020:intron | 45.0% |
| !! | TATGTTGATGGTTGGGATGG+TGG | + | chr3.3:79052906-79052925 | MS.gene31020:CDS | 45.0% |
| !!! | CCCCCATTGGGGAAATTTTT+TGG | - | chr3.3:79051975-79051994 | None:intergenic | 45.0% |
| ACTTGATCAGCTGGAAGAGG+GGG | - | chr3.3:79052528-79052547 | None:intergenic | 50.0% | |
| AGCTGGATACATCGTCCACA+GGG | + | chr3.3:79051528-79051547 | MS.gene31020:CDS | 50.0% | |
| AGGAATGTACAACGGGGGTA+TGG | + | chr3.3:79052881-79052900 | MS.gene31020:intron | 50.0% | |
| ATGCCGGATGCTATTGGACT+AGG | + | chr3.3:79050766-79050785 | MS.gene31020:intron | 50.0% | |
| CCACCTAGTCCAATAGCATC+CGG | - | chr3.3:79050772-79050791 | None:intergenic | 50.0% | |
| CCAGCTGGCTATTACGACAA+TGG | + | chr3.3:79053008-79053027 | MS.gene31020:CDS | 50.0% | |
| CCATTGTCGTAATAGCCAGC+TGG | - | chr3.3:79053011-79053030 | None:intergenic | 50.0% | |
| CCTAATAGGTACCCCCATTG+GGG | - | chr3.3:79051986-79052005 | None:intergenic | 50.0% | |
| GAAGACCTCACCATTGGAGA+TGG | + | chr3.3:79052024-79052043 | MS.gene31020:intron | 50.0% | |
| GCCGGATGGGAAATCCTATA+TGG | - | chr3.3:79050842-79050861 | None:intergenic | 50.0% | |
| GGAAGAAGGCCTTCTTCTAG+TGG | - | chr3.3:79051359-79051378 | None:intergenic | 50.0% | |
| GGACTAGGTGGATAATACGG+TGG | + | chr3.3:79050781-79050800 | MS.gene31020:intron | 50.0% | |
| GGGTTCTTAAGTGAGACCCT+GGG | + | chr3.3:79051935-79051954 | MS.gene31020:intron | 50.0% | |
| GGTCTCCAACCCTTGATGAA+AGG | - | chr3.3:79050223-79050242 | None:intergenic | 50.0% | |
| GGTGGCTCAACAACAGATCT+AGG | + | chr3.3:79050803-79050822 | MS.gene31020:intron | 50.0% | |
| GTGGGGTCCACTTAAGAATG+GGG | + | chr3.3:79051915-79051934 | MS.gene31020:intron | 50.0% | |
| GTGTGGGGTCCACTTAAGAA+TGG | + | chr3.3:79051913-79051932 | MS.gene31020:intron | 50.0% | |
| TAGGTGGATAATACGGTGGG+TGG | + | chr3.3:79050785-79050804 | MS.gene31020:intron | 50.0% | |
| TCCAATAGCATCCGGCATGA+GGG | - | chr3.3:79050764-79050783 | None:intergenic | 50.0% | |
| TGCTTGTCAAGTCATTGGGG+GGG | + | chr3.3:79050695-79050714 | MS.gene31020:intron | 50.0% | |
| TGTGAATCGCGCCAGATTAC+CGG | - | chr3.3:79050288-79050307 | None:intergenic | 50.0% | |
| TTAGAGGGTCTCCATTGGAG+TGG | - | chr3.3:79051806-79051825 | None:intergenic | 50.0% | |
| ! | AAGCCTTATCCCACTAAGCG+GGG | + | chr3.3:79050442-79050461 | MS.gene31020:intron | 50.0% |
| ! | CAAGCCTTATCCCACTAAGC+GGG | + | chr3.3:79050441-79050460 | MS.gene31020:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+CGG | + | chr3.3:79050440-79050459 | MS.gene31020:intron | 50.0% |
| !! | CAAGACGGCGCTGTTACTTT+AGG | + | chr3.3:79050154-79050173 | MS.gene31020:intron | 50.0% |
| !! | TGGGGGTACCTATTAGGTAC+CGG | + | chr3.3:79051989-79052008 | MS.gene31020:intron | 50.0% |
| ACGTGCATGCTTACCACGTG+GGG | - | chr3.3:79053054-79053073 | None:intergenic | 55.0% | |
| AGAAGGCTCACCAAGGATGC+GGG | + | chr3.3:79052673-79052692 | MS.gene31020:intron | 55.0% | |
| CAACCCCGCTTAGTGGGATA+AGG | - | chr3.3:79050448-79050467 | None:intergenic | 55.0% | |
| CAGAAGGCTCACCAAGGATG+CGG | + | chr3.3:79052672-79052691 | MS.gene31020:intron | 55.0% | |
| CCAATAGCATCCGGCATGAG+GGG | - | chr3.3:79050763-79050782 | None:intergenic | 55.0% | |
| CCGCTTAGTGGGATAAGGCT+TGG | - | chr3.3:79050443-79050462 | None:intergenic | 55.0% | |
| CTTATCCCACTAAGCGGGGT+TGG | + | chr3.3:79050446-79050465 | MS.gene31020:intron | 55.0% | |
| CTTGTCAAGTCATTGGGGGG+GGG | + | chr3.3:79050697-79050716 | MS.gene31020:intron | 55.0% | |
| GACGTGCATGCTTACCACGT+GGG | - | chr3.3:79053055-79053074 | None:intergenic | 55.0% | |
| GAGCTGGATACATCGTCCAC+AGG | + | chr3.3:79051527-79051546 | MS.gene31020:CDS | 55.0% | |
| GCTTGTCAAGTCATTGGGGG+GGG | + | chr3.3:79050696-79050715 | MS.gene31020:intron | 55.0% | |
| GGGGTTCTTAAGTGAGACCC+TGG | + | chr3.3:79051934-79051953 | MS.gene31020:intron | 55.0% | |
| GTCCAATAGCATCCGGCATG+AGG | - | chr3.3:79050765-79050784 | None:intergenic | 55.0% | |
| GTCGTAATAGCCAGCTGGCT+CGG | - | chr3.3:79053006-79053025 | None:intergenic | 55.0% | |
| GTGATCAAGCAGCTGCTCCA+CGG | - | chr3.3:79053561-79053580 | None:intergenic | 55.0% | |
| GTGGAGAAGCCCAAAGCAGA+TGG | + | chr3.3:79049792-79049811 | MS.gene31020:CDS | 55.0% | |
| TTGTCAAGTCATTGGGGGGG+GGG | + | chr3.3:79050698-79050717 | MS.gene31020:intron | 55.0% | |
| ! | CCGGATGCTATTGGACTAGG+TGG | + | chr3.3:79050769-79050788 | MS.gene31020:intron | 55.0% |
| !! | CATGAGGGGACTTGTTGGGA+AGG | - | chr3.3:79050749-79050768 | None:intergenic | 55.0% |
| !! | CCCCAATGGGGGTACCTATT+AGG | + | chr3.3:79051983-79052002 | MS.gene31020:intron | 55.0% |
| !! | GGAAGTGCTGCAGGGGATAT+TGG | - | chr3.3:79050906-79050925 | None:intergenic | 55.0% |
| !! | GGGGGTACCTATTAGGTACC+GGG | + | chr3.3:79051990-79052009 | MS.gene31020:intron | 55.0% |
| AAGGGGACGTGGTCGTGGAA+GGG | + | chr3.3:79052697-79052716 | MS.gene31020:CDS | 60.0% | |
| ACGTGGTCGTGGAAGGGGAA+GGG | + | chr3.3:79052703-79052722 | MS.gene31020:CDS | 60.0% | |
| ACTGAGCCAACCCCGCTTAG+TGG | - | chr3.3:79050455-79050474 | None:intergenic | 60.0% | |
| CCCAACAAGTCCCCTCATGC+CGG | + | chr3.3:79050750-79050769 | MS.gene31020:intron | 60.0% | |
| CCCCTCATGCCGGATGCTAT+TGG | + | chr3.3:79050760-79050779 | MS.gene31020:intron | 60.0% | |
| CTCACCAAGGATGCGGGGAA+GGG | + | chr3.3:79052679-79052698 | MS.gene31020:CDS | 60.0% | |
| CTCTTCCCCTTCCACGACCT+CGG | - | chr3.3:79053537-79053556 | None:intergenic | 60.0% | |
| CTGAGCCAACCCCGCTTAGT+GGG | - | chr3.3:79050454-79050473 | None:intergenic | 60.0% | |
| CTTTGGGCTTCTCCACCCTC+TGG | - | chr3.3:79049788-79049807 | None:intergenic | 60.0% | |
| GAAGGCTCACCAAGGATGCG+GGG | + | chr3.3:79052674-79052693 | MS.gene31020:intron | 60.0% | |
| GGACGTGCATGCTTACCACG+TGG | - | chr3.3:79053056-79053075 | None:intergenic | 60.0% | |
| TCACCAAGGATGCGGGGAAG+GGG | + | chr3.3:79052680-79052699 | MS.gene31020:CDS | 60.0% | |
| TCCGGCATGAGGGGACTTGT+TGG | - | chr3.3:79050754-79050773 | None:intergenic | 60.0% | |
| TGTCAAGTCATTGGGGGGGG+GGG | + | chr3.3:79050699-79050718 | MS.gene31020:intron | 60.0% | |
| ! | CCGGCATGAGGGGACTTGTT+GGG | - | chr3.3:79050753-79050772 | None:intergenic | 60.0% |
| ! | TGATTTGCAGGCCGAGGTCG+TGG | + | chr3.3:79053523-79053542 | MS.gene31020:intron | 60.0% |
| !! | ATGGTGGGCGTGGCTATGGT+GGG | + | chr3.3:79052922-79052941 | MS.gene31020:CDS | 60.0% |
| AGGGGAAGGGGAAGAGGCAG+AGG | + | chr3.3:79052716-79052735 | MS.gene31020:CDS | 65.0% | |
| AGGGGACGTGGTCGTGGAAG+GGG | + | chr3.3:79052698-79052717 | MS.gene31020:CDS | 65.0% | |
| CATAGCCACGTCCTCGTCCC+CGG | - | chr3.3:79052980-79052999 | None:intergenic | 65.0% | |
| CGAGGTCGTGGAAGGGGAAG+AGG | + | chr3.3:79053535-79053554 | MS.gene31020:CDS | 65.0% | |
| CGTGGAAGGGGAAGGGGAAG+AGG | + | chr3.3:79052710-79052729 | MS.gene31020:CDS | 65.0% | |
| CGTGGTCGTGGAAGGGGAAG+GGG | + | chr3.3:79052704-79052723 | MS.gene31020:CDS | 65.0% | |
| GAAGGGGACGTGGTCGTGGA+AGG | + | chr3.3:79052696-79052715 | MS.gene31020:CDS | 65.0% | |
| GACGTGGTCGTGGAAGGGGA+AGG | + | chr3.3:79052702-79052721 | MS.gene31020:CDS | 65.0% | |
| GCATGCTTACCACGTGGGGC+AGG | - | chr3.3:79053050-79053069 | None:intergenic | 65.0% | |
| GCTCACCAAGGATGCGGGGA+AGG | + | chr3.3:79052678-79052697 | MS.gene31020:CDS | 65.0% | |
| GGGGGGTCTCTTGAGACCCA+GGG | - | chr3.3:79051954-79051973 | None:intergenic | 65.0% | |
| GTCAAGTCATTGGGGGGGGG+GGG | + | chr3.3:79050700-79050719 | MS.gene31020:intron | 65.0% | |
| TCAAGTCATTGGGGGGGGGG+GGG | + | chr3.3:79050701-79050720 | MS.gene31020:intron | 65.0% | |
| TGCAGGCCGAGGTCGTGGAA+GGG | + | chr3.3:79053528-79053547 | MS.gene31020:intron | 65.0% | |
| TGCTTACCACGTGGGGCAGG+TGG | - | chr3.3:79053047-79053066 | None:intergenic | 65.0% | |
| TGGGGGGTCTCTTGAGACCC+AGG | - | chr3.3:79051955-79051974 | None:intergenic | 65.0% | |
| TTGCAGGCCGAGGTCGTGGA+AGG | + | chr3.3:79053527-79053546 | MS.gene31020:intron | 65.0% | |
| ! | GGAAAGCACGCCCCCATGCA+CGG | - | chr3.3:79052959-79052978 | None:intergenic | 65.0% |
| ! | GGCGTGGCTATGGTGGGAGA+GGG | + | chr3.3:79052928-79052947 | MS.gene31020:CDS | 65.0% |
| ! | GTGCATGGGGGCGTGCTTTC+CGG | + | chr3.3:79052958-79052977 | MS.gene31020:CDS | 65.0% |
| ! | TGCATGGGGGCGTGCTTTCC+GGG | + | chr3.3:79052959-79052978 | MS.gene31020:CDS | 65.0% |
| !! | GATGGTGGGCGTGGCTATGG+TGG | + | chr3.3:79052921-79052940 | MS.gene31020:CDS | 65.0% |
| !! | GATGGTTGGGATGGTGGGCG+TGG | + | chr3.3:79052912-79052931 | MS.gene31020:CDS | 65.0% |
| !! | TGGGATGGTGGGCGTGGCTA+TGG | + | chr3.3:79052918-79052937 | MS.gene31020:CDS | 65.0% |
| AAGTCATTGGGGGGGGGGGG+GGG | + | chr3.3:79050703-79050722 | MS.gene31020:intron | 70.0% | |
| AGGATGCGGGGAAGGGGACG+TGG | + | chr3.3:79052686-79052705 | MS.gene31020:CDS | 70.0% | |
| CAAGTCATTGGGGGGGGGGG+GGG | + | chr3.3:79050702-79050721 | MS.gene31020:intron | 70.0% | |
| CGGGGACGAGGACGTGGCTA+TGG | + | chr3.3:79052978-79052997 | MS.gene31020:CDS | 70.0% | |
| CGTCCCCTTCCCCGCATCCT+TGG | - | chr3.3:79052686-79052705 | None:intergenic | 70.0% | |
| CGTGGAAGGGGAAGAGGCCG+TGG | + | chr3.3:79053541-79053560 | MS.gene31020:CDS | 70.0% | |
| GATGCACCACCTGCCCCACG+TGG | + | chr3.3:79053038-79053057 | MS.gene31020:CDS | 70.0% | |
| GCAGGCCGAGGTCGTGGAAG+GGG | + | chr3.3:79053529-79053548 | MS.gene31020:intron | 70.0% | |
| GCTTTCCGGGGACGAGGACG+TGG | + | chr3.3:79052972-79052991 | MS.gene31020:CDS | 70.0% | |
| ! | AGAGGGCGTGGCCGTGCATG+GGG | + | chr3.3:79052945-79052964 | MS.gene31020:CDS | 70.0% |
| ! | GAGAGGGCGTGGCCGTGCAT+GGG | + | chr3.3:79052944-79052963 | MS.gene31020:CDS | 70.0% |
| ! | GCATGGGGGCGTGCTTTCCG+GGG | + | chr3.3:79052960-79052979 | MS.gene31020:CDS | 70.0% |
| ! | GGCTATGGTGCCGAGCCAGC+TGG | + | chr3.3:79052993-79053012 | MS.gene31020:CDS | 70.0% |
| ! | GGCTATGGTGGGAGAGGGCG+TGG | + | chr3.3:79052933-79052952 | MS.gene31020:CDS | 70.0% |
| ! | GGGCGTGGCTATGGTGGGAG+AGG | + | chr3.3:79052927-79052946 | MS.gene31020:CDS | 70.0% |
| AGTCATTGGGGGGGGGGGGG+GGG | + | chr3.3:79050704-79050723 | MS.gene31020:intron | 75.0% | |
| CGGGGAAGGGGACGTGGTCG+TGG | + | chr3.3:79052692-79052711 | MS.gene31020:CDS | 75.0% | |
| GGGCGTGCTTTCCGGGGACG+AGG | + | chr3.3:79052966-79052985 | MS.gene31020:CDS | 75.0% | |
| ! | GAGGGCGTGGCCGTGCATGG+GGG | + | chr3.3:79052946-79052965 | MS.gene31020:CDS | 75.0% |
| ! | GGAGAGGGCGTGGCCGTGCA+TGG | + | chr3.3:79052943-79052962 | MS.gene31020:CDS | 75.0% |
| ! | GTCATTGGGGGGGGGGGGGG+GGG | + | chr3.3:79050705-79050724 | MS.gene31020:intron | 80.0% |
| ! | TCATTGGGGGGGGGGGGGGG+GGG | + | chr3.3:79050706-79050725 | MS.gene31020:intron | 80.0% |
| ! | ATTGGGGGGGGGGGGGGGGG+GGG | + | chr3.3:79050708-79050727 | MS.gene31020:intron | 85.0% |
| ! | CATTGGGGGGGGGGGGGGGG+GGG | + | chr3.3:79050707-79050726 | MS.gene31020:intron | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr3.3:79050709-79050728 | MS.gene31020:intron | 90.0% |
| ! | GGGGGGGGGGGGGGGGGGGT+GGG | + | chr3.3:79050717-79050736 | MS.gene31020:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGTG+GGG | + | chr3.3:79050718-79050737 | MS.gene31020:intron | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr3.3:79050710-79050729 | MS.gene31020:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 79049774 | 79053649 | 79049774 | ID=MS.gene31020 |
| chr3.3 | mRNA | 79049774 | 79053649 | 79049774 | ID=MS.gene31020.t1;Parent=MS.gene31020 |
| chr3.3 | exon | 79049774 | 79049896 | 79049774 | ID=MS.gene31020.t1.exon1;Parent=MS.gene31020.t1 |
| chr3.3 | CDS | 79049774 | 79049896 | 79049774 | ID=cds.MS.gene31020.t1;Parent=MS.gene31020.t1 |
| chr3.3 | exon | 79051126 | 79051206 | 79051126 | ID=MS.gene31020.t1.exon2;Parent=MS.gene31020.t1 |
| chr3.3 | CDS | 79051126 | 79051206 | 79051126 | ID=cds.MS.gene31020.t1;Parent=MS.gene31020.t1 |
| chr3.3 | exon | 79051290 | 79051378 | 79051290 | ID=MS.gene31020.t1.exon3;Parent=MS.gene31020.t1 |
| chr3.3 | CDS | 79051290 | 79051378 | 79051290 | ID=cds.MS.gene31020.t1;Parent=MS.gene31020.t1 |
| chr3.3 | exon | 79051475 | 79051549 | 79051475 | ID=MS.gene31020.t1.exon4;Parent=MS.gene31020.t1 |
| chr3.3 | CDS | 79051475 | 79051549 | 79051475 | ID=cds.MS.gene31020.t1;Parent=MS.gene31020.t1 |
| chr3.3 | exon | 79052518 | 79052579 | 79052518 | ID=MS.gene31020.t1.exon5;Parent=MS.gene31020.t1 |
| chr3.3 | CDS | 79052518 | 79052579 | 79052518 | ID=cds.MS.gene31020.t1;Parent=MS.gene31020.t1 |
| chr3.3 | exon | 79052675 | 79052737 | 79052675 | ID=MS.gene31020.t1.exon6;Parent=MS.gene31020.t1 |
| chr3.3 | CDS | 79052675 | 79052737 | 79052675 | ID=cds.MS.gene31020.t1;Parent=MS.gene31020.t1 |
| chr3.3 | exon | 79052883 | 79053059 | 79052883 | ID=MS.gene31020.t1.exon7;Parent=MS.gene31020.t1 |
| chr3.3 | CDS | 79052883 | 79053059 | 79052883 | ID=cds.MS.gene31020.t1;Parent=MS.gene31020.t1 |
| chr3.3 | exon | 79053341 | 79053402 | 79053341 | ID=MS.gene31020.t1.exon8;Parent=MS.gene31020.t1 |
| chr3.3 | CDS | 79053341 | 79053402 | 79053341 | ID=cds.MS.gene31020.t1;Parent=MS.gene31020.t1 |
| chr3.3 | exon | 79053533 | 79053649 | 79053533 | ID=MS.gene31020.t1.exon9;Parent=MS.gene31020.t1 |
| chr3.3 | CDS | 79053533 | 79053649 | 79053533 | ID=cds.MS.gene31020.t1;Parent=MS.gene31020.t1 |
| Gene Sequence |
| Protein sequence |
