Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31033.t1 | XP_003602498.2 | 97.3 | 111 | 3 | 0 | 20 | 130 | 95 | 205 | 1.50E-56 | 228.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31033.t1 | Q93WU9 | 54.2 | 120 | 55 | 0 | 3 | 122 | 70 | 189 | 6.9e-31 | 134.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31033.t1 | G7JAB7 | 97.3 | 111 | 3 | 0 | 20 | 130 | 95 | 205 | 1.0e-56 | 228.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene31033.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049354 | MS.gene31033 | 0.957646 | 1.64E-115 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31033.t1 | MTR_3g095040 | 95.726 | 117 | 5 | 0 | 14 | 130 | 89 | 205 | 7.47e-79 | 231 |
MS.gene31033.t1 | MTR_8g092010 | 67.677 | 99 | 32 | 0 | 20 | 118 | 85 | 183 | 3.15e-46 | 148 |
MS.gene31033.t1 | MTR_1g015140 | 67.949 | 78 | 25 | 0 | 26 | 103 | 85 | 162 | 8.55e-36 | 120 |
MS.gene31033.t1 | MTR_3g104750 | 69.444 | 72 | 22 | 0 | 30 | 101 | 91 | 162 | 4.55e-34 | 116 |
MS.gene31033.t1 | MTR_2g033820 | 59.740 | 77 | 31 | 0 | 29 | 105 | 189 | 265 | 5.71e-30 | 111 |
MS.gene31033.t1 | MTR_4g094588 | 46.667 | 105 | 43 | 1 | 29 | 120 | 164 | 268 | 1.88e-29 | 108 |
MS.gene31033.t1 | MTR_8g007270 | 54.167 | 96 | 34 | 2 | 9 | 104 | 129 | 214 | 1.79e-28 | 103 |
MS.gene31033.t1 | MTR_4g122530 | 62.162 | 74 | 28 | 0 | 30 | 103 | 195 | 268 | 1.83e-28 | 107 |
MS.gene31033.t1 | MTR_7g079010 | 51.579 | 95 | 43 | 2 | 9 | 103 | 108 | 199 | 2.37e-28 | 103 |
MS.gene31033.t1 | MTR_5g091390 | 57.333 | 75 | 32 | 0 | 29 | 103 | 143 | 217 | 3.96e-28 | 105 |
MS.gene31033.t1 | MTR_1g086790 | 55.844 | 77 | 34 | 0 | 29 | 105 | 144 | 220 | 2.98e-27 | 103 |
MS.gene31033.t1 | MTR_7g028415 | 57.353 | 68 | 29 | 0 | 32 | 99 | 82 | 149 | 6.21e-27 | 98.6 |
MS.gene31033.t1 | MTR_7g028710 | 57.353 | 68 | 29 | 0 | 32 | 99 | 82 | 149 | 6.21e-27 | 98.6 |
MS.gene31033.t1 | MTR_7g011820 | 52.000 | 75 | 36 | 0 | 29 | 103 | 396 | 470 | 4.83e-26 | 101 |
MS.gene31033.t1 | MTR_7g011820 | 56.667 | 60 | 25 | 1 | 43 | 102 | 228 | 286 | 1.06e-15 | 72.4 |
MS.gene31033.t1 | MTR_8g096730 | 55.714 | 70 | 31 | 0 | 30 | 99 | 57 | 126 | 6.94e-26 | 95.1 |
MS.gene31033.t1 | MTR_5g043880 | 54.795 | 73 | 33 | 0 | 29 | 101 | 110 | 182 | 7.72e-26 | 98.6 |
MS.gene31033.t1 | MTR_5g042920 | 52.000 | 75 | 36 | 0 | 29 | 103 | 306 | 380 | 1.02e-25 | 100 |
MS.gene31033.t1 | MTR_5g042920 | 51.667 | 60 | 28 | 1 | 43 | 102 | 151 | 209 | 1.06e-13 | 66.6 |
MS.gene31033.t1 | MTR_7g080020 | 56.000 | 75 | 33 | 0 | 29 | 103 | 479 | 553 | 1.29e-25 | 100 |
MS.gene31033.t1 | MTR_7g080020 | 52.381 | 63 | 29 | 1 | 43 | 105 | 280 | 341 | 1.44e-14 | 69.3 |
MS.gene31033.t1 | MTR_7g080000 | 53.947 | 76 | 35 | 0 | 28 | 103 | 417 | 492 | 1.30e-25 | 100 |
MS.gene31033.t1 | MTR_7g080000 | 50.000 | 64 | 31 | 1 | 42 | 105 | 233 | 295 | 6.57e-14 | 67.4 |
MS.gene31033.t1 | MTR_7g109800 | 49.383 | 81 | 41 | 0 | 30 | 110 | 132 | 212 | 1.46e-25 | 98.2 |
MS.gene31033.t1 | MTR_5g094430 | 45.833 | 96 | 44 | 1 | 16 | 103 | 217 | 312 | 1.73e-25 | 99.8 |
MS.gene31033.t1 | MTR_5g094430 | 48.333 | 60 | 30 | 1 | 43 | 102 | 88 | 146 | 3.16e-12 | 62.4 |
MS.gene31033.t1 | MTR_5g094430 | 45.833 | 96 | 44 | 1 | 16 | 103 | 195 | 290 | 1.75e-25 | 99.4 |
MS.gene31033.t1 | MTR_5g094430 | 48.333 | 60 | 30 | 1 | 43 | 102 | 66 | 124 | 3.85e-12 | 62.4 |
MS.gene31033.t1 | MTR_5g094430 | 45.833 | 96 | 44 | 1 | 16 | 103 | 329 | 424 | 1.79e-25 | 100 |
MS.gene31033.t1 | MTR_5g094430 | 48.333 | 60 | 30 | 1 | 43 | 102 | 200 | 258 | 2.06e-12 | 63.2 |
MS.gene31033.t1 | MTR_3g095080 | 56.579 | 76 | 32 | 1 | 29 | 104 | 154 | 228 | 1.96e-25 | 96.7 |
MS.gene31033.t1 | MTR_3g095080 | 56.579 | 76 | 32 | 1 | 29 | 104 | 130 | 204 | 2.23e-25 | 95.9 |
MS.gene31033.t1 | MTR_3g009470 | 50.000 | 88 | 44 | 0 | 29 | 116 | 481 | 568 | 2.53e-25 | 100 |
MS.gene31033.t1 | MTR_3g009470 | 53.333 | 60 | 27 | 1 | 43 | 102 | 280 | 338 | 1.15e-14 | 69.7 |
MS.gene31033.t1 | MTR_7g071120 | 51.724 | 87 | 36 | 1 | 17 | 103 | 304 | 384 | 4.84e-25 | 99.0 |
MS.gene31033.t1 | MTR_7g071120 | 51.667 | 60 | 28 | 1 | 43 | 102 | 166 | 224 | 3.17e-14 | 68.2 |
MS.gene31033.t1 | MTR_4g082580 | 52.000 | 75 | 36 | 0 | 29 | 103 | 264 | 338 | 7.41e-25 | 97.4 |
MS.gene31033.t1 | MTR_4g082580 | 44.828 | 87 | 43 | 1 | 43 | 129 | 145 | 226 | 2.04e-15 | 71.6 |
MS.gene31033.t1 | MTR_4g013260 | 55.405 | 74 | 33 | 0 | 29 | 102 | 322 | 395 | 7.59e-25 | 98.2 |
MS.gene31033.t1 | MTR_4g013260 | 45.833 | 72 | 39 | 0 | 31 | 102 | 172 | 243 | 1.02e-15 | 72.4 |
MS.gene31033.t1 | MTR_3g056100 | 54.054 | 74 | 34 | 0 | 29 | 102 | 244 | 317 | 1.30e-24 | 97.4 |
MS.gene31033.t1 | MTR_3g056100 | 48.333 | 60 | 30 | 1 | 43 | 102 | 99 | 157 | 4.95e-12 | 62.0 |
MS.gene31033.t1 | MTR_3g056100 | 54.054 | 74 | 34 | 0 | 29 | 102 | 388 | 461 | 1.35e-24 | 97.8 |
MS.gene31033.t1 | MTR_3g056100 | 48.333 | 60 | 30 | 1 | 43 | 102 | 243 | 301 | 3.60e-12 | 62.4 |
MS.gene31033.t1 | MTR_3g056100 | 53.333 | 75 | 35 | 0 | 29 | 103 | 401 | 475 | 1.47e-24 | 97.8 |
MS.gene31033.t1 | MTR_3g056100 | 48.333 | 60 | 30 | 1 | 43 | 102 | 243 | 301 | 3.76e-12 | 62.4 |
MS.gene31033.t1 | MTR_3g056100 | 54.054 | 74 | 34 | 0 | 29 | 102 | 257 | 330 | 1.54e-24 | 97.1 |
MS.gene31033.t1 | MTR_3g056100 | 48.333 | 60 | 30 | 1 | 43 | 102 | 99 | 157 | 5.18e-12 | 62.0 |
MS.gene31033.t1 | MTR_3g031220 | 53.333 | 75 | 35 | 0 | 29 | 103 | 351 | 425 | 5.43e-24 | 95.9 |
MS.gene31033.t1 | MTR_3g031220 | 44.000 | 75 | 37 | 2 | 33 | 103 | 184 | 257 | 8.65e-14 | 67.0 |
MS.gene31033.t1 | MTR_8g092140 | 57.143 | 77 | 31 | 2 | 29 | 104 | 145 | 220 | 6.11e-24 | 92.4 |
MS.gene31033.t1 | MTR_5g074400 | 53.333 | 75 | 35 | 0 | 29 | 103 | 406 | 480 | 1.74e-23 | 94.7 |
MS.gene31033.t1 | MTR_5g074400 | 51.667 | 60 | 28 | 1 | 43 | 102 | 243 | 301 | 3.14e-13 | 65.5 |
MS.gene31033.t1 | MTR_7g100510 | 44.330 | 97 | 48 | 1 | 12 | 102 | 324 | 420 | 4.08e-23 | 93.2 |
MS.gene31033.t1 | MTR_7g100510 | 54.237 | 59 | 26 | 1 | 44 | 102 | 190 | 247 | 5.99e-14 | 67.4 |
MS.gene31033.t1 | MTR_6g086555 | 46.835 | 79 | 41 | 1 | 25 | 102 | 188 | 266 | 4.80e-22 | 90.1 |
MS.gene31033.t1 | MTR_5g097490 | 52.055 | 73 | 35 | 0 | 30 | 102 | 239 | 311 | 9.23e-22 | 89.0 |
MS.gene31033.t1 | MTR_5g097490 | 39.726 | 73 | 43 | 1 | 40 | 112 | 89 | 160 | 3.50e-11 | 59.3 |
MS.gene31033.t1 | MTR_7g062220 | 46.914 | 81 | 37 | 1 | 43 | 123 | 124 | 198 | 3.31e-21 | 86.7 |
MS.gene31033.t1 | MTR_1g077780 | 39.394 | 99 | 50 | 2 | 5 | 102 | 32 | 121 | 2.76e-20 | 80.9 |
MS.gene31033.t1 | MTR_4g132430 | 48.649 | 74 | 37 | 1 | 30 | 102 | 114 | 187 | 3.38e-20 | 84.7 |
MS.gene31033.t1 | MTR_1g078260 | 42.553 | 94 | 47 | 2 | 13 | 99 | 211 | 304 | 4.14e-20 | 85.1 |
MS.gene31033.t1 | MTR_3g053330 | 50.000 | 74 | 36 | 1 | 30 | 102 | 238 | 311 | 4.30e-20 | 84.7 |
MS.gene31033.t1 | MTR_2g045360 | 51.351 | 74 | 35 | 1 | 30 | 102 | 198 | 271 | 6.16e-20 | 84.3 |
MS.gene31033.t1 | MTR_4g130900 | 44.000 | 75 | 42 | 0 | 29 | 103 | 345 | 419 | 6.57e-20 | 84.3 |
MS.gene31033.t1 | MTR_2g105060 | 36.296 | 135 | 67 | 5 | 15 | 130 | 63 | 197 | 1.43e-19 | 81.3 |
MS.gene31033.t1 | MTR_2g105060 | 36.296 | 135 | 67 | 5 | 15 | 130 | 138 | 272 | 3.02e-19 | 81.6 |
MS.gene31033.t1 | MTR_7g110720 | 45.055 | 91 | 45 | 2 | 17 | 102 | 159 | 249 | 3.16e-19 | 82.4 |
MS.gene31033.t1 | MTR_7g110720 | 45.055 | 91 | 45 | 2 | 17 | 102 | 186 | 276 | 3.56e-19 | 82.0 |
MS.gene31033.t1 | MTR_4g094412 | 48.000 | 75 | 38 | 1 | 30 | 103 | 221 | 295 | 6.94e-19 | 81.6 |
MS.gene31033.t1 | MTR_4g094412 | 48.000 | 75 | 38 | 1 | 30 | 103 | 230 | 304 | 8.21e-19 | 81.3 |
MS.gene31033.t1 | MTR_4g094908 | 44.186 | 86 | 44 | 2 | 15 | 99 | 241 | 323 | 9.25e-19 | 80.5 |
MS.gene31033.t1 | MTR_4g049760 | 49.351 | 77 | 38 | 1 | 30 | 105 | 277 | 353 | 1.51e-18 | 80.5 |
MS.gene31033.t1 | MTR_4g107970 | 44.706 | 85 | 46 | 1 | 19 | 102 | 154 | 238 | 2.14e-18 | 80.1 |
MS.gene31033.t1 | MTR_4g132430 | 48.649 | 74 | 37 | 1 | 30 | 102 | 248 | 321 | 2.32e-18 | 80.1 |
MS.gene31033.t1 | MTR_2g023930 | 48.649 | 74 | 37 | 1 | 30 | 102 | 292 | 365 | 3.23e-18 | 79.7 |
MS.gene31033.t1 | MTR_4g107970 | 44.706 | 85 | 46 | 1 | 19 | 102 | 231 | 315 | 3.56e-18 | 79.7 |
MS.gene31033.t1 | MTR_3g106060 | 52.542 | 59 | 27 | 1 | 42 | 99 | 137 | 195 | 1.72e-17 | 76.6 |
MS.gene31033.t1 | MTR_7g109600 | 43.158 | 95 | 51 | 2 | 9 | 102 | 21 | 113 | 2.85e-17 | 75.5 |
MS.gene31033.t1 | MTR_7g009730 | 46.479 | 71 | 37 | 1 | 30 | 99 | 206 | 276 | 3.16e-17 | 77.0 |
MS.gene31033.t1 | MTR_2g088000 | 47.297 | 74 | 38 | 1 | 30 | 102 | 336 | 409 | 4.21e-17 | 76.6 |
MS.gene31033.t1 | MTR_5g016610 | 47.887 | 71 | 36 | 1 | 30 | 99 | 186 | 256 | 7.37e-17 | 74.7 |
MS.gene31033.t1 | MTR_4g127040 | 44.318 | 88 | 42 | 2 | 13 | 99 | 221 | 302 | 7.89e-17 | 75.1 |
MS.gene31033.t1 | MTR_2g083870 | 41.758 | 91 | 50 | 2 | 15 | 102 | 50 | 140 | 8.20e-17 | 74.3 |
MS.gene31033.t1 | MTR_1g009613 | 43.750 | 80 | 44 | 1 | 21 | 99 | 240 | 319 | 9.19e-17 | 75.1 |
MS.gene31033.t1 | MTR_8g087000 | 47.143 | 70 | 36 | 1 | 44 | 112 | 78 | 147 | 1.13e-16 | 73.6 |
MS.gene31033.t1 | MTR_8g087000 | 47.143 | 70 | 36 | 1 | 44 | 112 | 77 | 146 | 1.30e-16 | 73.6 |
MS.gene31033.t1 | MTR_4g007060 | 49.206 | 63 | 31 | 1 | 41 | 102 | 126 | 188 | 1.85e-16 | 73.6 |
MS.gene31033.t1 | MTR_5g097500 | 41.892 | 74 | 43 | 0 | 29 | 102 | 216 | 289 | 2.41e-16 | 73.6 |
MS.gene31033.t1 | MTR_4g007060 | 49.206 | 63 | 31 | 1 | 41 | 102 | 160 | 222 | 3.10e-16 | 73.2 |
MS.gene31033.t1 | MTR_4g049790 | 45.333 | 75 | 40 | 1 | 30 | 103 | 299 | 373 | 9.44e-16 | 72.8 |
MS.gene31033.t1 | MTR_8g028565 | 45.455 | 66 | 35 | 1 | 40 | 104 | 152 | 217 | 1.26e-15 | 72.0 |
MS.gene31033.t1 | MTR_1g099600 | 47.619 | 63 | 32 | 1 | 41 | 102 | 183 | 245 | 2.01e-15 | 71.2 |
MS.gene31033.t1 | MTR_2g032030 | 37.778 | 90 | 55 | 1 | 14 | 102 | 238 | 327 | 3.99e-15 | 70.9 |
MS.gene31033.t1 | MTR_8g098945 | 50.000 | 60 | 29 | 1 | 44 | 102 | 130 | 189 | 4.35e-15 | 69.7 |
MS.gene31033.t1 | MTR_7g079040 | 47.619 | 63 | 32 | 1 | 41 | 102 | 152 | 214 | 4.41e-15 | 70.1 |
MS.gene31033.t1 | MTR_1g070455 | 49.180 | 61 | 30 | 1 | 40 | 99 | 290 | 350 | 4.53e-15 | 70.5 |
MS.gene31033.t1 | MTR_8g092010 | 58.000 | 50 | 21 | 0 | 20 | 69 | 85 | 134 | 7.13e-15 | 66.6 |
MS.gene31033.t1 | MTR_2g032030 | 37.363 | 91 | 56 | 1 | 14 | 103 | 238 | 328 | 7.73e-15 | 70.1 |
MS.gene31033.t1 | MTR_1g013760 | 47.368 | 57 | 29 | 1 | 44 | 99 | 141 | 197 | 8.24e-15 | 69.3 |
MS.gene31033.t1 | MTR_2g016770 | 37.895 | 95 | 55 | 2 | 9 | 102 | 4 | 95 | 1.00e-14 | 68.2 |
MS.gene31033.t1 | MTR_3g009470 | 53.333 | 60 | 27 | 1 | 43 | 102 | 280 | 338 | 1.64e-14 | 68.9 |
MS.gene31033.t1 | MTR_2g016770 | 48.333 | 60 | 30 | 1 | 44 | 102 | 28 | 87 | 2.75e-14 | 66.6 |
MS.gene31033.t1 | MTR_3g031220 | 44.000 | 75 | 37 | 2 | 33 | 103 | 184 | 257 | 7.00e-14 | 67.0 |
MS.gene31033.t1 | MTR_0117s0040 | 35.556 | 90 | 54 | 2 | 13 | 101 | 47 | 133 | 9.00e-14 | 65.9 |
MS.gene31033.t1 | MTR_1g013790 | 38.095 | 84 | 47 | 2 | 41 | 119 | 99 | 182 | 9.30e-14 | 65.9 |
MS.gene31033.t1 | MTR_3g108960 | 38.202 | 89 | 46 | 3 | 13 | 99 | 290 | 371 | 9.76e-14 | 66.6 |
MS.gene31033.t1 | MTR_2g024380 | 45.312 | 64 | 34 | 1 | 40 | 102 | 248 | 311 | 1.40e-13 | 66.2 |
MS.gene31033.t1 | MTR_2g024350 | 43.077 | 65 | 36 | 1 | 40 | 103 | 5 | 69 | 5.07e-13 | 63.5 |
MS.gene31033.t1 | MTR_8g067635 | 43.284 | 67 | 37 | 1 | 40 | 105 | 346 | 412 | 1.33e-12 | 63.5 |
MS.gene31033.t1 | MTR_8g067650 | 43.939 | 66 | 36 | 1 | 41 | 105 | 337 | 402 | 1.83e-12 | 63.2 |
MS.gene31033.t1 | MTR_8g069935 | 43.750 | 64 | 35 | 1 | 40 | 102 | 328 | 391 | 3.03e-12 | 62.4 |
MS.gene31033.t1 | MTR_5g074200 | 47.619 | 63 | 32 | 1 | 43 | 105 | 220 | 281 | 5.01e-12 | 61.6 |
MS.gene31033.t1 | MTR_6g053200 | 40.909 | 66 | 36 | 3 | 40 | 103 | 327 | 391 | 1.04e-11 | 61.2 |
MS.gene31033.t1 | MTR_2g075610 | 44.262 | 61 | 31 | 1 | 41 | 98 | 27 | 87 | 1.75e-11 | 58.9 |
MS.gene31033.t1 | MTR_4g047580 | 40.541 | 74 | 43 | 1 | 30 | 102 | 268 | 341 | 1.76e-11 | 60.5 |
MS.gene31033.t1 | MTR_2g075700 | 37.234 | 94 | 53 | 3 | 27 | 117 | 131 | 221 | 5.46e-11 | 58.9 |
MS.gene31033.t1 | MTR_7g073430 | 36.471 | 85 | 44 | 3 | 43 | 124 | 122 | 199 | 7.26e-11 | 58.2 |
MS.gene31033.t1 | MTR_3g090860 | 40.678 | 59 | 32 | 1 | 42 | 97 | 132 | 190 | 9.07e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31033.t1 | AT5G64810 | 54.167 | 120 | 55 | 0 | 3 | 122 | 70 | 189 | 5.36e-42 | 137 |
MS.gene31033.t1 | AT5G26170 | 75.000 | 72 | 18 | 0 | 30 | 101 | 100 | 171 | 1.41e-37 | 125 |
MS.gene31033.t1 | AT2G46130 | 57.895 | 76 | 30 | 1 | 28 | 103 | 15 | 88 | 4.76e-29 | 102 |
MS.gene31033.t1 | AT4G18170 | 57.895 | 76 | 32 | 0 | 29 | 104 | 158 | 233 | 7.27e-29 | 107 |
MS.gene31033.t1 | AT3G01970 | 60.000 | 70 | 28 | 0 | 30 | 99 | 52 | 121 | 1.89e-28 | 102 |
MS.gene31033.t1 | AT5G49520 | 59.459 | 74 | 30 | 0 | 30 | 103 | 208 | 281 | 2.35e-28 | 107 |
MS.gene31033.t1 | AT5G41570 | 51.136 | 88 | 41 | 1 | 16 | 103 | 71 | 156 | 6.92e-28 | 101 |
MS.gene31033.t1 | AT5G46350 | 55.263 | 76 | 34 | 0 | 29 | 104 | 169 | 244 | 9.29e-28 | 104 |
MS.gene31033.t1 | AT1G29860 | 58.904 | 73 | 30 | 0 | 30 | 102 | 123 | 195 | 9.66e-28 | 103 |
MS.gene31033.t1 | AT1G13960 | 55.405 | 74 | 33 | 0 | 29 | 102 | 242 | 315 | 5.45e-27 | 102 |
MS.gene31033.t1 | AT1G13960 | 47.436 | 78 | 37 | 2 | 31 | 105 | 61 | 137 | 1.42e-17 | 77.4 |
MS.gene31033.t1 | AT2G21900 | 46.392 | 97 | 44 | 2 | 14 | 107 | 82 | 173 | 5.51e-27 | 99.8 |
MS.gene31033.t1 | AT2G47260 | 48.958 | 96 | 44 | 1 | 10 | 105 | 146 | 236 | 5.73e-27 | 102 |
MS.gene31033.t1 | AT3G62340 | 58.667 | 75 | 31 | 0 | 29 | 103 | 104 | 178 | 9.66e-27 | 100 |
MS.gene31033.t1 | AT1G13960 | 55.405 | 74 | 33 | 0 | 29 | 102 | 395 | 468 | 1.28e-26 | 103 |
MS.gene31033.t1 | AT1G13960 | 47.059 | 85 | 40 | 3 | 24 | 105 | 208 | 290 | 1.50e-17 | 77.8 |
MS.gene31033.t1 | AT5G13080 | 57.143 | 70 | 30 | 0 | 30 | 99 | 54 | 123 | 2.06e-26 | 96.7 |
MS.gene31033.t1 | AT2G44745 | 50.538 | 93 | 37 | 1 | 7 | 99 | 118 | 201 | 2.48e-26 | 98.6 |
MS.gene31033.t1 | AT1G64000 | 55.405 | 74 | 31 | 1 | 30 | 103 | 101 | 172 | 4.72e-26 | 97.1 |
MS.gene31033.t1 | AT1G69310 | 54.795 | 73 | 33 | 0 | 29 | 101 | 133 | 205 | 7.58e-26 | 98.6 |
MS.gene31033.t1 | AT1G69310 | 54.795 | 73 | 33 | 0 | 29 | 101 | 133 | 205 | 7.58e-26 | 98.6 |
MS.gene31033.t1 | AT1G69310 | 54.795 | 73 | 33 | 0 | 29 | 101 | 133 | 205 | 7.58e-26 | 98.6 |
MS.gene31033.t1 | AT2G03340 | 53.333 | 75 | 35 | 0 | 29 | 103 | 401 | 475 | 8.49e-26 | 101 |
MS.gene31033.t1 | AT2G03340 | 50.000 | 74 | 32 | 2 | 33 | 102 | 236 | 308 | 1.05e-15 | 72.4 |
MS.gene31033.t1 | AT4G39410 | 48.485 | 99 | 41 | 2 | 6 | 104 | 195 | 283 | 1.99e-25 | 97.8 |
MS.gene31033.t1 | AT2G30250 | 46.939 | 98 | 47 | 1 | 11 | 103 | 291 | 388 | 6.49e-25 | 97.8 |
MS.gene31033.t1 | AT2G46130 | 55.263 | 76 | 28 | 2 | 28 | 103 | 15 | 84 | 9.92e-25 | 91.3 |
MS.gene31033.t1 | AT5G56270 | 54.667 | 75 | 34 | 0 | 29 | 103 | 473 | 547 | 1.12e-24 | 98.2 |
MS.gene31033.t1 | AT5G56270 | 55.000 | 60 | 26 | 1 | 43 | 102 | 273 | 331 | 5.07e-15 | 70.5 |
MS.gene31033.t1 | AT2G04880 | 44.444 | 99 | 47 | 1 | 18 | 108 | 250 | 348 | 1.13e-24 | 97.8 |
MS.gene31033.t1 | AT2G04880 | 42.857 | 63 | 35 | 1 | 41 | 103 | 109 | 170 | 7.90e-11 | 58.5 |
MS.gene31033.t1 | AT2G04880 | 44.444 | 99 | 47 | 1 | 18 | 108 | 274 | 372 | 1.25e-24 | 97.8 |
MS.gene31033.t1 | AT2G04880 | 43.548 | 62 | 34 | 1 | 41 | 102 | 109 | 169 | 7.17e-11 | 58.5 |
MS.gene31033.t1 | AT5G07100 | 47.000 | 100 | 49 | 2 | 3 | 102 | 105 | 200 | 1.92e-24 | 93.6 |
MS.gene31033.t1 | AT5G07100 | 46.667 | 60 | 32 | 0 | 43 | 102 | 24 | 83 | 2.05e-12 | 62.0 |
MS.gene31033.t1 | AT5G07100 | 47.000 | 100 | 49 | 2 | 3 | 102 | 105 | 200 | 1.92e-24 | 93.6 |
MS.gene31033.t1 | AT5G07100 | 46.667 | 60 | 32 | 0 | 43 | 102 | 24 | 83 | 2.05e-12 | 62.0 |
MS.gene31033.t1 | AT5G07100 | 47.000 | 100 | 49 | 2 | 3 | 102 | 105 | 200 | 1.92e-24 | 93.6 |
MS.gene31033.t1 | AT5G07100 | 46.667 | 60 | 32 | 0 | 43 | 102 | 24 | 83 | 2.05e-12 | 62.0 |
MS.gene31033.t1 | AT5G07100 | 47.000 | 100 | 49 | 2 | 3 | 102 | 105 | 200 | 1.92e-24 | 93.6 |
MS.gene31033.t1 | AT5G07100 | 46.667 | 60 | 32 | 0 | 43 | 102 | 24 | 83 | 2.05e-12 | 62.0 |
MS.gene31033.t1 | AT2G38470 | 53.333 | 75 | 35 | 0 | 29 | 103 | 348 | 422 | 3.25e-24 | 96.7 |
MS.gene31033.t1 | AT2G38470 | 39.394 | 99 | 56 | 3 | 6 | 102 | 146 | 242 | 5.51e-13 | 64.7 |
MS.gene31033.t1 | AT4G26640 | 52.000 | 75 | 36 | 0 | 29 | 103 | 191 | 265 | 3.58e-24 | 95.5 |
MS.gene31033.t1 | AT4G26640 | 39.535 | 86 | 51 | 1 | 41 | 126 | 33 | 117 | 3.38e-13 | 65.1 |
MS.gene31033.t1 | AT4G26640 | 52.000 | 75 | 36 | 0 | 29 | 103 | 191 | 265 | 3.58e-24 | 95.5 |
MS.gene31033.t1 | AT4G26640 | 39.535 | 86 | 51 | 1 | 41 | 126 | 33 | 117 | 3.38e-13 | 65.1 |
MS.gene31033.t1 | AT4G26640 | 52.000 | 75 | 36 | 0 | 29 | 103 | 191 | 265 | 3.58e-24 | 95.5 |
MS.gene31033.t1 | AT4G26640 | 39.535 | 86 | 51 | 1 | 41 | 126 | 33 | 117 | 3.38e-13 | 65.1 |
MS.gene31033.t1 | AT4G26640 | 52.000 | 75 | 36 | 0 | 29 | 103 | 191 | 265 | 3.58e-24 | 95.5 |
MS.gene31033.t1 | AT4G26640 | 39.535 | 86 | 51 | 1 | 41 | 126 | 33 | 117 | 3.38e-13 | 65.1 |
MS.gene31033.t1 | AT4G26640 | 52.000 | 75 | 36 | 0 | 29 | 103 | 327 | 401 | 4.01e-24 | 96.3 |
MS.gene31033.t1 | AT4G26640 | 48.387 | 62 | 31 | 1 | 41 | 102 | 169 | 229 | 2.91e-13 | 65.5 |
MS.gene31033.t1 | AT4G26640 | 52.000 | 75 | 36 | 0 | 29 | 103 | 367 | 441 | 4.43e-24 | 96.3 |
MS.gene31033.t1 | AT4G26640 | 48.387 | 62 | 31 | 1 | 41 | 102 | 209 | 269 | 2.97e-13 | 65.5 |
MS.gene31033.t1 | AT3G01080 | 50.000 | 74 | 37 | 0 | 29 | 102 | 292 | 365 | 4.45e-24 | 95.9 |
MS.gene31033.t1 | AT3G01080 | 51.613 | 62 | 29 | 1 | 43 | 104 | 167 | 227 | 1.38e-14 | 69.3 |
MS.gene31033.t1 | AT4G26640 | 52.000 | 75 | 36 | 0 | 29 | 103 | 295 | 369 | 4.74e-24 | 96.3 |
MS.gene31033.t1 | AT4G26640 | 39.535 | 86 | 51 | 1 | 41 | 126 | 137 | 221 | 3.13e-13 | 65.5 |
MS.gene31033.t1 | AT5G07100 | 53.333 | 75 | 35 | 0 | 29 | 103 | 220 | 294 | 5.38e-24 | 94.4 |
MS.gene31033.t1 | AT5G07100 | 46.667 | 60 | 32 | 0 | 43 | 102 | 117 | 176 | 1.93e-12 | 62.8 |
MS.gene31033.t1 | AT3G01080 | 50.000 | 74 | 37 | 0 | 29 | 102 | 330 | 403 | 5.71e-24 | 95.9 |
MS.gene31033.t1 | AT3G01080 | 51.613 | 62 | 29 | 1 | 43 | 104 | 205 | 265 | 1.53e-14 | 69.3 |
MS.gene31033.t1 | AT4G26440 | 53.333 | 75 | 35 | 0 | 29 | 103 | 358 | 432 | 5.20e-23 | 93.6 |
MS.gene31033.t1 | AT4G26440 | 53.333 | 60 | 27 | 1 | 43 | 102 | 178 | 236 | 5.41e-14 | 67.8 |
MS.gene31033.t1 | AT1G69310 | 52.055 | 73 | 31 | 1 | 29 | 101 | 133 | 201 | 1.70e-21 | 87.0 |
MS.gene31033.t1 | AT1G68150 | 48.052 | 77 | 39 | 1 | 30 | 105 | 222 | 298 | 5.78e-20 | 84.0 |
MS.gene31033.t1 | AT4G04450 | 48.649 | 74 | 37 | 1 | 30 | 102 | 185 | 258 | 1.02e-19 | 84.0 |
MS.gene31033.t1 | AT4G30935 | 43.210 | 81 | 44 | 1 | 41 | 119 | 329 | 409 | 2.22e-19 | 82.8 |
MS.gene31033.t1 | AT1G62300 | 50.000 | 74 | 36 | 1 | 30 | 102 | 299 | 372 | 2.66e-19 | 82.8 |
MS.gene31033.t1 | AT4G04450 | 48.649 | 74 | 37 | 1 | 30 | 102 | 279 | 352 | 2.86e-19 | 82.8 |
MS.gene31033.t1 | AT1G55600 | 46.575 | 73 | 39 | 0 | 30 | 102 | 294 | 366 | 5.53e-19 | 82.0 |
MS.gene31033.t1 | AT5G43290 | 45.679 | 81 | 43 | 1 | 20 | 99 | 90 | 170 | 8.52e-19 | 79.7 |
MS.gene31033.t1 | AT4G01720 | 42.708 | 96 | 50 | 2 | 12 | 102 | 204 | 299 | 1.01e-18 | 81.3 |
MS.gene31033.t1 | AT4G22070 | 50.000 | 74 | 36 | 1 | 30 | 102 | 284 | 357 | 4.05e-18 | 79.3 |
MS.gene31033.t1 | AT4G22070 | 50.000 | 74 | 36 | 1 | 30 | 102 | 284 | 357 | 4.05e-18 | 79.3 |
MS.gene31033.t1 | AT4G22070 | 50.000 | 74 | 36 | 1 | 30 | 102 | 284 | 357 | 4.05e-18 | 79.3 |
MS.gene31033.t1 | AT4G22070 | 50.000 | 74 | 36 | 1 | 30 | 102 | 284 | 357 | 4.05e-18 | 79.3 |
MS.gene31033.t1 | AT1G29280 | 38.679 | 106 | 62 | 2 | 3 | 105 | 32 | 137 | 5.46e-18 | 77.4 |
MS.gene31033.t1 | AT2G25000 | 45.833 | 72 | 38 | 1 | 42 | 112 | 102 | 173 | 5.79e-18 | 76.6 |
MS.gene31033.t1 | AT2G25000 | 45.833 | 72 | 38 | 1 | 42 | 112 | 102 | 173 | 5.79e-18 | 76.6 |
MS.gene31033.t1 | AT5G15130 | 45.455 | 77 | 41 | 1 | 30 | 105 | 172 | 248 | 7.25e-18 | 78.6 |
MS.gene31033.t1 | AT5G15130 | 45.455 | 77 | 41 | 1 | 30 | 105 | 214 | 290 | 8.50e-18 | 78.6 |
MS.gene31033.t1 | AT1G18860 | 47.297 | 74 | 38 | 1 | 30 | 102 | 226 | 299 | 1.01e-17 | 78.2 |
MS.gene31033.t1 | AT2G23320 | 42.353 | 85 | 45 | 2 | 16 | 99 | 216 | 297 | 1.13e-17 | 77.4 |
MS.gene31033.t1 | AT2G25000 | 47.143 | 70 | 36 | 1 | 44 | 112 | 126 | 195 | 1.17e-17 | 76.3 |
MS.gene31033.t1 | AT2G25000 | 47.143 | 70 | 36 | 1 | 44 | 112 | 147 | 216 | 1.57e-17 | 76.3 |
MS.gene31033.t1 | AT4G31800 | 51.667 | 60 | 28 | 1 | 44 | 102 | 112 | 171 | 1.72e-17 | 75.9 |
MS.gene31033.t1 | AT4G24240 | 45.455 | 88 | 41 | 2 | 13 | 99 | 257 | 338 | 1.97e-17 | 77.0 |
MS.gene31033.t1 | AT4G31800 | 51.667 | 60 | 28 | 1 | 44 | 102 | 177 | 236 | 3.16e-17 | 75.9 |
MS.gene31033.t1 | AT1G80840 | 47.619 | 63 | 32 | 1 | 41 | 102 | 144 | 206 | 5.64e-17 | 75.1 |
MS.gene31033.t1 | AT3G58710 | 39.175 | 97 | 58 | 1 | 13 | 108 | 40 | 136 | 1.99e-16 | 73.6 |
MS.gene31033.t1 | AT3G58710 | 38.776 | 98 | 59 | 1 | 12 | 108 | 40 | 137 | 2.28e-16 | 73.2 |
MS.gene31033.t1 | AT2G24570 | 42.000 | 100 | 50 | 4 | 12 | 109 | 218 | 311 | 2.59e-16 | 73.6 |
MS.gene31033.t1 | AT2G30590 | 45.000 | 80 | 43 | 1 | 21 | 99 | 291 | 370 | 2.87e-16 | 73.9 |
MS.gene31033.t1 | AT2G37260 | 50.000 | 58 | 29 | 0 | 42 | 99 | 348 | 405 | 4.36e-16 | 73.6 |
MS.gene31033.t1 | AT2G37260 | 52.542 | 59 | 27 | 1 | 44 | 102 | 166 | 223 | 1.01e-12 | 63.9 |
MS.gene31033.t1 | AT2G37260 | 50.000 | 58 | 29 | 0 | 42 | 99 | 268 | 325 | 5.39e-16 | 72.8 |
MS.gene31033.t1 | AT2G37260 | 52.542 | 59 | 27 | 1 | 44 | 102 | 86 | 143 | 1.48e-12 | 63.2 |
MS.gene31033.t1 | AT2G37260 | 50.000 | 58 | 29 | 0 | 42 | 99 | 266 | 323 | 5.78e-16 | 72.8 |
MS.gene31033.t1 | AT2G37260 | 52.542 | 59 | 27 | 1 | 44 | 102 | 84 | 141 | 1.63e-12 | 63.2 |
MS.gene31033.t1 | AT2G34830 | 41.304 | 92 | 50 | 3 | 13 | 102 | 186 | 275 | 5.99e-16 | 73.2 |
MS.gene31033.t1 | AT2G34830 | 41.304 | 92 | 50 | 3 | 13 | 102 | 195 | 284 | 6.63e-16 | 73.2 |
MS.gene31033.t1 | AT5G28650 | 52.459 | 61 | 28 | 1 | 40 | 99 | 259 | 319 | 6.88e-16 | 72.4 |
MS.gene31033.t1 | AT4G01250 | 48.387 | 62 | 31 | 1 | 44 | 104 | 129 | 190 | 1.56e-15 | 71.2 |
MS.gene31033.t1 | AT4G31550 | 43.182 | 88 | 43 | 3 | 13 | 99 | 221 | 302 | 2.28e-15 | 71.2 |
MS.gene31033.t1 | AT3G04670 | 50.820 | 61 | 29 | 1 | 40 | 99 | 259 | 319 | 2.83e-15 | 70.9 |
MS.gene31033.t1 | AT1G30650 | 39.362 | 94 | 54 | 3 | 11 | 102 | 185 | 277 | 2.87e-15 | 71.2 |
MS.gene31033.t1 | AT4G31550 | 42.697 | 89 | 44 | 3 | 12 | 99 | 221 | 303 | 3.10e-15 | 70.9 |
MS.gene31033.t1 | AT5G52830 | 46.269 | 67 | 35 | 1 | 37 | 102 | 159 | 225 | 5.98e-15 | 70.1 |
MS.gene31033.t1 | AT3G01080 | 51.613 | 62 | 29 | 1 | 43 | 104 | 205 | 265 | 1.30e-14 | 68.9 |
MS.gene31033.t1 | AT4G23550 | 45.312 | 64 | 34 | 1 | 41 | 103 | 138 | 201 | 1.50e-14 | 68.6 |
MS.gene31033.t1 | AT1G69810 | 42.667 | 75 | 41 | 2 | 30 | 102 | 132 | 206 | 6.99e-14 | 67.0 |
MS.gene31033.t1 | AT5G45050 | 50.000 | 60 | 29 | 1 | 44 | 102 | 1042 | 1101 | 7.65e-14 | 67.4 |
MS.gene31033.t1 | AT5G45050 | 50.000 | 60 | 29 | 1 | 44 | 102 | 1181 | 1240 | 7.70e-14 | 67.4 |
MS.gene31033.t1 | AT5G45050 | 50.000 | 60 | 29 | 1 | 44 | 102 | 1153 | 1212 | 8.64e-14 | 67.0 |
MS.gene31033.t1 | AT1G69810 | 42.667 | 75 | 41 | 2 | 30 | 102 | 190 | 264 | 1.04e-13 | 66.6 |
MS.gene31033.t1 | AT5G24110 | 36.471 | 85 | 49 | 3 | 42 | 122 | 112 | 195 | 2.97e-12 | 62.4 |
MS.gene31033.t1 | AT2G40740 | 34.234 | 111 | 64 | 3 | 12 | 116 | 145 | 252 | 1.14e-11 | 60.5 |
MS.gene31033.t1 | AT2G40740 | 34.234 | 111 | 64 | 3 | 12 | 116 | 154 | 261 | 1.56e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 1.75e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 1.75e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 1.75e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 1.80e-11 | 60.5 |
MS.gene31033.t1 | AT1G66560 | 44.828 | 58 | 29 | 1 | 43 | 97 | 103 | 160 | 1.83e-11 | 59.7 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 1.84e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 1.86e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 1.87e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 1.92e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 1.92e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 400 | 459 | 1.93e-11 | 60.5 |
MS.gene31033.t1 | AT4G12020 | 45.902 | 61 | 32 | 1 | 42 | 102 | 467 | 526 | 2.71e-11 | 60.1 |
Find 40 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGATTAACTTAGCATTAAT+TGG | 0.209206 | 3.3:+78837943 | None:intergenic |
GAGATCGCAGCTTGAGATTA+TGG | 0.274833 | 3.3:-78839267 | MS.gene31033:CDS |
ATACTGCACCCCAGTGTCTT+TGG | 0.341378 | 3.3:-78838014 | MS.gene31033:CDS |
CTCGTTCTAAACGTCACTCT+TGG | 0.361959 | 3.3:+78839287 | None:intergenic |
GGATTCAAATGGAGGAAGTA+TGG | 0.376820 | 3.3:-78839239 | MS.gene31033:CDS |
TGGGGTGCAGTATGAATTGC+AGG | 0.381764 | 3.3:+78838024 | None:intergenic |
GCACCCTCGACGAAAATGTT+TGG | 0.425423 | 3.3:-78839977 | None:intergenic |
GTTTCAATTGTGAAAGAAGA+AGG | 0.451206 | 3.3:+78839948 | None:intergenic |
CAGCTTGAGATTATGGATGA+TGG | 0.458517 | 3.3:-78839260 | MS.gene31033:CDS |
AGAAAAGGGTGGAAAGGGAT+AGG | 0.462080 | 3.3:-78838102 | MS.gene31033:CDS |
AAGGATGTGGTGTGAAGAAA+AGG | 0.469530 | 3.3:-78838117 | MS.gene31033:CDS |
TCGTTCTAAACGTCACTCTT+GGG | 0.470165 | 3.3:+78839288 | None:intergenic |
GAAAAGGGTGGAAAGGGATA+GGG | 0.470665 | 3.3:-78838101 | MS.gene31033:CDS |
GTGCTGCTGTGGCCATTCAT+TGG | 0.482833 | 3.3:+78837985 | None:intergenic |
ACGTAAAAGCAGGGAGATGA+AGG | 0.487697 | 3.3:-78839330 | MS.gene31033:CDS |
TTGGAAGAAGAGGTTGCAGA+AGG | 0.494174 | 3.3:+78837962 | None:intergenic |
CTTTGGTGTATTCCAATGAA+TGG | 0.497333 | 3.3:-78837997 | MS.gene31033:CDS |
TGTGAAGAAAAGGGTGGAAA+GGG | 0.502030 | 3.3:-78838107 | MS.gene31033:CDS |
AGGAACTACTACAAGTGTTC+AGG | 0.517573 | 3.3:-78838142 | MS.gene31033:CDS |
AAGAGTAATTACCTTGGGTA+TGG | 0.521127 | 3.3:+78839194 | None:intergenic |
TTGACAGGAAACGTAAAAGC+AGG | 0.524253 | 3.3:-78839340 | MS.gene31033:intron |
TTATGGATGATGGATTCAAA+TGG | 0.530112 | 3.3:-78839250 | MS.gene31033:CDS |
TTAGCATTAATTGGAAGAAG+AGG | 0.534274 | 3.3:+78837952 | None:intergenic |
TATGTGCTAACAAGCTATGA+AGG | 0.537065 | 3.3:-78838067 | MS.gene31033:CDS |
TTGGAATACACCAAAGACAC+TGG | 0.546851 | 3.3:+78838004 | None:intergenic |
TACTACAAGTGTTCAGGTGA+AGG | 0.550615 | 3.3:-78838136 | MS.gene31033:CDS |
GTGTGAAGAAAAGGGTGGAA+AGG | 0.565384 | 3.3:-78838108 | MS.gene31033:CDS |
GTTGCAGAAGGGTGCTGCTG+TGG | 0.575437 | 3.3:+78837974 | None:intergenic |
CCTCGACGAAAATGTTTGGA+AGG | 0.595069 | 3.3:-78839973 | None:intergenic |
TGGATGATGGATTCAAATGG+AGG | 0.596809 | 3.3:-78839247 | MS.gene31033:CDS |
TGGAATACACCAAAGACACT+GGG | 0.603339 | 3.3:+78838005 | None:intergenic |
AAGTGTTCAGGTGAAGGATG+TGG | 0.620118 | 3.3:-78838130 | MS.gene31033:CDS |
GGGGTGCAGTATGAATTGCA+GGG | 0.623339 | 3.3:+78838025 | None:intergenic |
AGGATGTGGTGTGAAGAAAA+GGG | 0.633271 | 3.3:-78838116 | MS.gene31033:CDS |
TGGAAGAAGAGGTTGCAGAA+GGG | 0.634753 | 3.3:+78837963 | None:intergenic |
TCAAGAATAGTCCATACCCA+AGG | 0.659061 | 3.3:-78839205 | MS.gene31033:intron |
GGGTGCAGTATGAATTGCAG+GGG | 0.665109 | 3.3:+78838026 | None:intergenic |
ATGTGGTGTGAAGAAAAGGG+TGG | 0.669156 | 3.3:-78838113 | MS.gene31033:CDS |
TGACAGGAAACGTAAAAGCA+GGG | 0.673462 | 3.3:-78839339 | MS.gene31033:intron |
GGAATACACCAAAGACACTG+GGG | 0.775844 | 3.3:+78838006 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATTATTATTGTGATAA+GGG | + | chr3.3:78838256-78838275 | None:intergenic | 10.0% |
!! | TTATAATGAAAAAAATACTA+TGG | + | chr3.3:78838046-78838065 | None:intergenic | 10.0% |
!!! | ATAATAATGTATGTATATTT+TGG | - | chr3.3:78838547-78838566 | MS.gene31033:intron | 10.0% |
!! | AGTAATAAAGCATATATATT+AGG | - | chr3.3:78837995-78838014 | MS.gene31033:CDS | 15.0% |
!! | GATATATTATTATTGTGATA+AGG | + | chr3.3:78838257-78838276 | None:intergenic | 15.0% |
!! | GATCATATATATAAATATTG+TGG | - | chr3.3:78839138-78839157 | MS.gene31033:intron | 15.0% |
!! | TAATAAATATACATATCAAG+TGG | - | chr3.3:78838079-78838098 | MS.gene31033:CDS | 15.0% |
!! | TAATTAGCAAACAAATTAAA+TGG | - | chr3.3:78839305-78839324 | MS.gene31033:CDS | 15.0% |
!! | TCATAATTATAAACTGTATA+CGG | - | chr3.3:78839207-78839226 | MS.gene31033:CDS | 15.0% |
!!! | CAAAATAACTTTTCTATTTA+TGG | + | chr3.3:78838972-78838991 | None:intergenic | 15.0% |
!!! | CTTTTTCTTTAAATTATTCT+AGG | - | chr3.3:78839679-78839698 | MS.gene31033:intron | 15.0% |
!! | AAAAATTAACATCACAAAAG+TGG | + | chr3.3:78838512-78838531 | None:intergenic | 20.0% |
!! | AACATTATCCTTAACTTAAT+TGG | - | chr3.3:78839074-78839093 | MS.gene31033:intron | 20.0% |
!! | CATATATATAAATATTGTGG+CGG | - | chr3.3:78839141-78839160 | MS.gene31033:intron | 20.0% |
!! | CATTAATTTATCTGATTATC+TGG | - | chr3.3:78838301-78838320 | MS.gene31033:intron | 20.0% |
!! | TACATATTGCATATATGATT+GGG | + | chr3.3:78839254-78839273 | None:intergenic | 20.0% |
!! | TTACATATTGCATATATGAT+TGG | + | chr3.3:78839255-78839274 | None:intergenic | 20.0% |
!!! | ATTGATGACATTAATATCAA+TGG | + | chr3.3:78838405-78838424 | None:intergenic | 20.0% |
!!! | TAATTACACACAAAATTTTC+TGG | + | chr3.3:78839711-78839730 | None:intergenic | 20.0% |
!!! | TATGTATATTTTGGATTCTT+TGG | - | chr3.3:78838556-78838575 | MS.gene31033:intron | 20.0% |
! | AACTTAATTGGATAGGAAAT+AGG | - | chr3.3:78839086-78839105 | MS.gene31033:intron | 25.0% |
! | GATATTAATGTCATCAATCA+AGG | - | chr3.3:78838407-78838426 | MS.gene31033:intron | 25.0% |
! | TAAATTAATGAAATCAGACG+AGG | + | chr3.3:78838291-78838310 | None:intergenic | 25.0% |
! | TATCCTTAACTTAATTGGAT+AGG | - | chr3.3:78839079-78839098 | MS.gene31033:intron | 25.0% |
! | TTTCCTATCCAATTAAGTTA+AGG | + | chr3.3:78839085-78839104 | None:intergenic | 25.0% |
ATCTGTCTAATTAATTGCGA+GGG | - | chr3.3:78838202-78838221 | MS.gene31033:intron | 30.0% | |
ATGATGAACATCAAGAATGT+TGG | - | chr3.3:78838330-78838349 | MS.gene31033:intron | 30.0% | |
ATTAGGGTTTCCAAAATACA+TGG | + | chr3.3:78838228-78838247 | None:intergenic | 30.0% | |
ATTGTTTAACCAATGCTCTT+AGG | - | chr3.3:78839042-78839061 | MS.gene31033:intron | 30.0% | |
CATAAAAGACCAAATTCTGT+GGG | - | chr3.3:78838165-78838184 | MS.gene31033:intron | 30.0% | |
CTTGAGTTAAAAGTTGTGTA+CGG | + | chr3.3:78838907-78838926 | None:intergenic | 30.0% | |
GATGACATTAATATCAATGG+TGG | + | chr3.3:78838402-78838421 | None:intergenic | 30.0% | |
GTTTCAATTGTGAAAGAAGA+AGG | + | chr3.3:78837975-78837994 | None:intergenic | 30.0% | |
TAAACTGTATACGGTTTAAG+TGG | - | chr3.3:78839216-78839235 | MS.gene31033:CDS | 30.0% | |
TATCTGTCTAATTAATTGCG+AGG | - | chr3.3:78838201-78838220 | MS.gene31033:intron | 30.0% | |
TCATAAAAGACCAAATTCTG+TGG | - | chr3.3:78838164-78838183 | MS.gene31033:intron | 30.0% | |
TCTTTAATTCATTGCCTTCT+TGG | - | chr3.3:78838761-78838780 | MS.gene31033:intron | 30.0% | |
TGACTAAGAGTAATTACCTT+GGG | + | chr3.3:78838734-78838753 | None:intergenic | 30.0% | |
TGTGATAAGGGTTAGAATTA+GGG | + | chr3.3:78838244-78838263 | None:intergenic | 30.0% | |
TTGACTAAGAGTAATTACCT+TGG | + | chr3.3:78838735-78838754 | None:intergenic | 30.0% | |
TTGTGATAAGGGTTAGAATT+AGG | + | chr3.3:78838245-78838264 | None:intergenic | 30.0% | |
! | CATCATGTTATTGTTGTTGT+TGG | + | chr3.3:78838462-78838481 | None:intergenic | 30.0% |
!! | GTACACAACTTTTAACTCAA+GGG | - | chr3.3:78838906-78838925 | MS.gene31033:intron | 30.0% |
!! | TGCAAAAGTGCCATTATTTA+CGG | + | chr3.3:78839537-78839556 | None:intergenic | 30.0% |
!! | TTATGGATGATGGATTCAAA+TGG | - | chr3.3:78838670-78838689 | MS.gene31033:intron | 30.0% |
AACTGAATCATCAGACAACA+AGG | - | chr3.3:78838367-78838386 | MS.gene31033:intron | 35.0% | |
AAGAGTAATTACCTTGGGTA+TGG | + | chr3.3:78838729-78838748 | None:intergenic | 35.0% | |
AGATGTGTACATATACAAGC+AGG | - | chr3.3:78839758-78839777 | MS.gene31033:intron | 35.0% | |
GACATTAATATCAATGGTGG+TGG | + | chr3.3:78838399-78838418 | None:intergenic | 35.0% | |
TATGTGCTAACAAGCTATGA+AGG | - | chr3.3:78839853-78839872 | MS.gene31033:intron | 35.0% | |
TGTACGGCATGATATTGATA+GGG | + | chr3.3:78838891-78838910 | None:intergenic | 35.0% | |
TTAATGAAATCAGACGAGGA+AGG | + | chr3.3:78838287-78838306 | None:intergenic | 35.0% | |
TTGGATAGGAAATAGGATAG+TGG | - | chr3.3:78839093-78839112 | MS.gene31033:intron | 35.0% | |
TTTATCTGATTATCTGGTGC+TGG | - | chr3.3:78838307-78838326 | MS.gene31033:intron | 35.0% | |
! | CTTTGGTGTATTCCAATGAA+TGG | - | chr3.3:78839923-78839942 | MS.gene31033:intron | 35.0% |
! | GTTATTGTTGTTGTTGGTAG+AGG | + | chr3.3:78838456-78838475 | None:intergenic | 35.0% |
!! | AAAAGTGCCATTATTTACGG+GGG | + | chr3.3:78839534-78839553 | None:intergenic | 35.0% |
!! | ATATATGCTAGTTGATGGAG+GGG | - | chr3.3:78839167-78839186 | MS.gene31033:intron | 35.0% |
!! | CAAAAGTGCCATTATTTACG+GGG | + | chr3.3:78839535-78839554 | None:intergenic | 35.0% |
!! | CGTACACAACTTTTAACTCA+AGG | - | chr3.3:78838905-78838924 | MS.gene31033:intron | 35.0% |
!! | GATATATGCTAGTTGATGGA+GGG | - | chr3.3:78839166-78839185 | MS.gene31033:intron | 35.0% |
!! | GCAAAAGTGCCATTATTTAC+GGG | + | chr3.3:78839536-78839555 | None:intergenic | 35.0% |
!! | TGATATATGCTAGTTGATGG+AGG | - | chr3.3:78839165-78839184 | MS.gene31033:intron | 35.0% |
!! | TTAATATCAATGGTGGTGGA+AGG | + | chr3.3:78838395-78838414 | None:intergenic | 35.0% |
!! | TTTGGATTCTTTGGTTTGAC+AGG | - | chr3.3:78838565-78838584 | MS.gene31033:intron | 35.0% |
AAGGATGTGGTGTGAAGAAA+AGG | - | chr3.3:78839803-78839822 | MS.gene31033:intron | 40.0% | |
AGGAACTACTACAAGTGTTC+AGG | - | chr3.3:78839778-78839797 | MS.gene31033:intron | 40.0% | |
AGGATGTGGTGTGAAGAAAA+GGG | - | chr3.3:78839804-78839823 | MS.gene31033:intron | 40.0% | |
CAGCTTGAGATTATGGATGA+TGG | - | chr3.3:78838660-78838679 | MS.gene31033:intron | 40.0% | |
GAATGTTGGTCACAAAGTAC+AGG | - | chr3.3:78838344-78838363 | MS.gene31033:intron | 40.0% | |
GGATTCAAATGGAGGAAGTA+TGG | - | chr3.3:78838681-78838700 | MS.gene31033:intron | 40.0% | |
GGCTGATATATGCTAGTTGA+TGG | - | chr3.3:78839162-78839181 | MS.gene31033:intron | 40.0% | |
GTGTACGGCATGATATTGAT+AGG | + | chr3.3:78838892-78838911 | None:intergenic | 40.0% | |
TACTACAAGTGTTCAGGTGA+AGG | - | chr3.3:78839784-78839803 | MS.gene31033:intron | 40.0% | |
TATGACGTATGTAGCCAAGA+AGG | + | chr3.3:78838778-78838797 | None:intergenic | 40.0% | |
TCAAGAATAGTCCATACCCA+AGG | - | chr3.3:78838715-78838734 | MS.gene31033:intron | 40.0% | |
TCGATTCCAGGACAAACAAA+TGG | + | chr3.3:78839383-78839402 | None:intergenic | 40.0% | |
TGACAGGAAACGTAAAAGCA+GGG | - | chr3.3:78838581-78838600 | MS.gene31033:intron | 40.0% | |
TGGAATACACCAAAGACACT+GGG | + | chr3.3:78839918-78839937 | None:intergenic | 40.0% | |
TGGTTTCCATTTGTTTGTCC+TGG | - | chr3.3:78839374-78839393 | MS.gene31033:intron | 40.0% | |
TGTGAAGAAAAGGGTGGAAA+GGG | - | chr3.3:78839813-78839832 | MS.gene31033:intron | 40.0% | |
TTGACAGGAAACGTAAAAGC+AGG | - | chr3.3:78838580-78838599 | MS.gene31033:intron | 40.0% | |
TTGGAATACACCAAAGACAC+TGG | + | chr3.3:78839919-78839938 | None:intergenic | 40.0% | |
! | AATCGATGTCCTAAGAGCAT+TGG | + | chr3.3:78839054-78839073 | None:intergenic | 40.0% |
! | GATAGGAAATAGGATAGTGG+TGG | - | chr3.3:78839096-78839115 | MS.gene31033:intron | 40.0% |
! | TCGTTCTAAACGTCACTCTT+GGG | + | chr3.3:78838635-78838654 | None:intergenic | 40.0% |
!! | CTACTACTTTTCTCGATTCC+AGG | + | chr3.3:78839395-78839414 | None:intergenic | 40.0% |
!! | TATATGCTAGTTGATGGAGG+GGG | - | chr3.3:78839168-78839187 | MS.gene31033:intron | 40.0% |
!! | TGGATGATGGATTCAAATGG+AGG | - | chr3.3:78838673-78838692 | MS.gene31033:intron | 40.0% |
AAGAGAGAGATTCTGTGCAC+TGG | - | chr3.3:78839599-78839618 | MS.gene31033:intron | 45.0% | |
AAGTGTTCAGGTGAAGGATG+TGG | - | chr3.3:78839790-78839809 | MS.gene31033:intron | 45.0% | |
ACACGCAAGCTCAACAAGTA+GGG | + | chr3.3:78839347-78839366 | None:intergenic | 45.0% | |
ACGTAAAAGCAGGGAGATGA+AGG | - | chr3.3:78838590-78838609 | MS.gene31033:intron | 45.0% | |
AGAAAAGGGTGGAAAGGGAT+AGG | - | chr3.3:78839818-78839837 | MS.gene31033:intron | 45.0% | |
AGAGAGAGATTCTGTGCACT+GGG | - | chr3.3:78839600-78839619 | MS.gene31033:intron | 45.0% | |
AGCTAGTCCCCCGTAAATAA+TGG | - | chr3.3:78839524-78839543 | MS.gene31033:intron | 45.0% | |
ATGAAATCAGACGAGGAAGG+AGG | + | chr3.3:78838284-78838303 | None:intergenic | 45.0% | |
ATGTGGTGTGAAGAAAAGGG+TGG | - | chr3.3:78839807-78839826 | MS.gene31033:intron | 45.0% | |
CTGCAAAGACCCACAGAATT+TGG | + | chr3.3:78838177-78838196 | None:intergenic | 45.0% | |
CTGTTGTTGATCTCATCAGG+TGG | - | chr3.3:78839624-78839643 | MS.gene31033:intron | 45.0% | |
GAAAAGGGTGGAAAGGGATA+GGG | - | chr3.3:78839819-78839838 | MS.gene31033:intron | 45.0% | |
GAGATCGCAGCTTGAGATTA+TGG | - | chr3.3:78838653-78838672 | MS.gene31033:intron | 45.0% | |
GGAATACACCAAAGACACTG+GGG | + | chr3.3:78839917-78839936 | None:intergenic | 45.0% | |
GGACTGTTGTTGATCTCATC+AGG | - | chr3.3:78839621-78839640 | MS.gene31033:intron | 45.0% | |
GTGTGAAGAAAAGGGTGGAA+AGG | - | chr3.3:78839812-78839831 | MS.gene31033:intron | 45.0% | |
TACACGCAAGCTCAACAAGT+AGG | + | chr3.3:78839348-78839367 | None:intergenic | 45.0% | |
TGAGCTTGCGTGTATATGTG+TGG | - | chr3.3:78839354-78839373 | MS.gene31033:intron | 45.0% | |
TGGAAGAAGAGGTTGCAGAA+GGG | + | chr3.3:78839960-78839979 | None:intergenic | 45.0% | |
TTGGAAGAAGAGGTTGCAGA+AGG | + | chr3.3:78839961-78839980 | None:intergenic | 45.0% | |
! | AGGAAATAGGATAGTGGTGG+TGG | - | chr3.3:78839099-78839118 | MS.gene31033:intron | 45.0% |
! | ATTGCGAGGGCCATGTATTT+TGG | - | chr3.3:78838215-78838234 | MS.gene31033:intron | 45.0% |
! | CTCGTTCTAAACGTCACTCT+TGG | + | chr3.3:78838636-78838655 | None:intergenic | 45.0% |
! | GGAAATAGGATAGTGGTGGT+GGG | - | chr3.3:78839100-78839119 | MS.gene31033:intron | 45.0% |
!! | ATATGCTAGTTGATGGAGGG+GGG | - | chr3.3:78839169-78839188 | MS.gene31033:intron | 45.0% |
AAATCAGACGAGGAAGGAGG+AGG | + | chr3.3:78838281-78838300 | None:intergenic | 50.0% | |
ATACTGCACCCCAGTGTCTT+TGG | - | chr3.3:78839906-78839925 | MS.gene31033:intron | 50.0% | |
GGGGTGCAGTATGAATTGCA+GGG | + | chr3.3:78839898-78839917 | None:intergenic | 50.0% | |
GGGTGCAGTATGAATTGCAG+GGG | + | chr3.3:78839897-78839916 | None:intergenic | 50.0% | |
TGGGGTGCAGTATGAATTGC+AGG | + | chr3.3:78839899-78839918 | None:intergenic | 50.0% | |
!! | ATAGTGGTGGTGGGTCTGAT+TGG | - | chr3.3:78839109-78839128 | MS.gene31033:intron | 50.0% |
!! | GGACTAGCTAGCTAGCAAGT+GGG | + | chr3.3:78839513-78839532 | None:intergenic | 50.0% |
! | GTGCTGCTGTGGCCATTCAT+TGG | + | chr3.3:78839938-78839957 | None:intergenic | 55.0% |
!! | GGGACTAGCTAGCTAGCAAG+TGG | + | chr3.3:78839514-78839533 | None:intergenic | 55.0% |
!! | GTTGCAGAAGGGTGCTGCTG+TGG | + | chr3.3:78839949-78839968 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 78837958 | 78839984 | 78837958 | ID=MS.gene31033 |
chr3.3 | mRNA | 78837958 | 78839984 | 78837958 | ID=MS.gene31033.t1;Parent=MS.gene31033 |
chr3.3 | exon | 78839947 | 78839984 | 78839947 | ID=MS.gene31033.t1.exon1;Parent=MS.gene31033.t1 |
chr3.3 | CDS | 78839947 | 78839984 | 78839947 | ID=cds.MS.gene31033.t1;Parent=MS.gene31033.t1 |
chr3.3 | exon | 78839206 | 78839355 | 78839206 | ID=MS.gene31033.t1.exon2;Parent=MS.gene31033.t1 |
chr3.3 | CDS | 78839206 | 78839355 | 78839206 | ID=cds.MS.gene31033.t1;Parent=MS.gene31033.t1 |
chr3.3 | exon | 78837958 | 78838162 | 78837958 | ID=MS.gene31033.t1.exon3;Parent=MS.gene31033.t1 |
chr3.3 | CDS | 78837958 | 78838162 | 78837958 | ID=cds.MS.gene31033.t1;Parent=MS.gene31033.t1 |
Gene Sequence |
Protein sequence |