Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31063.t1 | XP_003597479.1 | 98.3 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 7.50E-196 | 693 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31063.t1 | Q04869 | 25.9 | 367 | 241 | 12 | 1 | 355 | 1 | 348 | 6.7e-20 | 99.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31063.t1 | G7IHQ8 | 98.3 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 5.4e-196 | 693.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052032 | MS.gene31063 | 0.854168 | 1.47E-61 | -1.69E-46 |
| MS.gene052665 | MS.gene31063 | 0.818789 | 1.63E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene31063 | 0.83205 | 1.18E-55 | -1.69E-46 |
| MS.gene056432 | MS.gene31063 | 0.804511 | 2.09E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31063.t1 | MTR_2g098500 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 718 |
| MS.gene31063.t1 | MTR_8g016390 | 95.789 | 95 | 4 | 0 | 262 | 356 | 1 | 95 | 3.72e-60 | 189 |
| MS.gene31063.t1 | MTR_8g016390 | 95.789 | 95 | 4 | 0 | 262 | 356 | 1 | 95 | 1.83e-59 | 188 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31063.t1 | AT3G20790 | 69.886 | 352 | 100 | 3 | 6 | 356 | 9 | 355 | 2.44e-177 | 496 |
Find 72 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTCACTCAAATTGTTAA+AGG | 0.165991 | 2.4:+5499355 | MS.gene31063:CDS |
| GGGAGGTTTCATTCTTGATA+TGG | 0.259648 | 2.4:+5501405 | MS.gene31063:intron |
| AACCGCTGTTCTTGTCGTTT+TGG | 0.265232 | 2.4:+5498040 | MS.gene31063:CDS |
| TACTCCACTGAAAGGGAAAA+AGG | 0.284785 | 2.4:-5502619 | None:intergenic |
| CCAATACAGATCGCGATTCT+AGG | 0.299863 | 2.4:+5497819 | MS.gene31063:CDS |
| GGAAATGTGGAATCTAAATT+TGG | 0.301322 | 2.4:+5497978 | MS.gene31063:CDS |
| ATGCTCCTGGGCAAATAATT+TGG | 0.322118 | 2.4:+5500705 | MS.gene31063:CDS |
| TGCATTTCATTGCAGGGTTA+AGG | 0.331258 | 2.4:+5501431 | MS.gene31063:CDS |
| AATGTTTATCCTCAGTCATT+TGG | 0.334582 | 2.4:+5502153 | MS.gene31063:intron |
| ACCACATGCCTTGGGTGATC+TGG | 0.360498 | 2.4:-5502215 | None:intergenic |
| ATGGGTGTGCATTTCATTGC+AGG | 0.364601 | 2.4:+5501424 | MS.gene31063:CDS |
| AACGACAAGAACAGCGGTTA+TGG | 0.368079 | 2.4:-5498036 | None:intergenic |
| TCGATTTCTGCTGATGCTCC+TGG | 0.371960 | 2.4:+5500692 | MS.gene31063:CDS |
| CAAGAATCTAATTACCTTGA+GGG | 0.378715 | 2.4:-5502685 | None:intergenic |
| TTAGAGGCAATGCTTGAGTC+TGG | 0.383664 | 2.4:+5503016 | MS.gene31063:CDS |
| AAGACAGATGATATATTATC+TGG | 0.394396 | 2.4:-5502065 | None:intergenic |
| CCTAGAATCGCGATCTGTAT+TGG | 0.394617 | 2.4:-5497819 | None:intergenic |
| GGAGGTTTCATTCTTGATAT+GGG | 0.408876 | 2.4:+5501406 | MS.gene31063:CDS |
| TGCAACAATCATTACCTTGA+AGG | 0.412787 | 2.4:-5499391 | None:intergenic |
| TGGCGAGTCGTTGGCATGAA+TGG | 0.428674 | 2.4:+5502362 | MS.gene31063:CDS |
| GAAGAGAAACCGGCAGCATC+TGG | 0.437544 | 2.4:+5499594 | MS.gene31063:intron |
| ATCCTCAGTCATTTGGAGAA+TGG | 0.439451 | 2.4:+5502160 | MS.gene31063:intron |
| GCTGGTAAACATGTCCTTCA+AGG | 0.444302 | 2.4:+5499377 | MS.gene31063:CDS |
| CCAGGTAACCATGTTGTCCT+TGG | 0.464149 | 2.4:-5502409 | None:intergenic |
| ACAAAAGAGAGGCGATGCTC+AGG | 0.477335 | 2.4:-5502968 | None:intergenic |
| ATCATGAGTTCGACTCCAAA+TGG | 0.477980 | 2.4:-5497913 | None:intergenic |
| AAGAAACTAATTGCTGACCT+TGG | 0.488102 | 2.4:+5500841 | MS.gene31063:CDS |
| TGTGAGATCTCCGAGAGTCT+TGG | 0.491599 | 2.4:-5497873 | None:intergenic |
| AGAAACTAATTGCTGACCTT+GGG | 0.508482 | 2.4:+5500842 | MS.gene31063:CDS |
| AGAAACAAATACCTCAACTA+AGG | 0.508827 | 2.4:-5500759 | None:intergenic |
| TCACTCAAATTGTTAAAGGC+TGG | 0.510501 | 2.4:+5499359 | MS.gene31063:CDS |
| CCAAGGACAACATGGTTACC+TGG | 0.511081 | 2.4:+5502409 | MS.gene31063:CDS |
| GCTTGAGTCTGGATCAAAGC+AGG | 0.513242 | 2.4:+5503027 | MS.gene31063:CDS |
| TATATTATCTGGCGGTGGTA+AGG | 0.516675 | 2.4:-5502054 | None:intergenic |
| TGGTGGATATGAAGAGAAAC+CGG | 0.517771 | 2.4:+5499584 | MS.gene31063:intron |
| GGAATCCACGCTCAATCTGA+AGG | 0.518597 | 2.4:-5502388 | None:intergenic |
| TACTGCAGGTATAACTGAGC+TGG | 0.521091 | 2.4:+5500646 | MS.gene31063:intron |
| AGTGTGCAAGTTATTATAGA+AGG | 0.522861 | 2.4:+5500874 | MS.gene31063:CDS |
| GAATCTAAATTTGGAGATAA+CGG | 0.525100 | 2.4:+5497987 | MS.gene31063:CDS |
| ATTTCATTATATGATGCTCA+TGG | 0.528500 | 2.4:+5502582 | MS.gene31063:CDS |
| CGATTTCTGCTGATGCTCCT+GGG | 0.530286 | 2.4:+5500693 | MS.gene31063:CDS |
| CAGATTGAGCGTGGATTCCA+AGG | 0.533748 | 2.4:+5502392 | MS.gene31063:CDS |
| CTTCAGTTACTCCACTGAAA+GGG | 0.534240 | 2.4:-5502626 | None:intergenic |
| TAGATCTTGTGGCGAGTCGT+TGG | 0.542383 | 2.4:+5502353 | MS.gene31063:intron |
| TCATTTGGAGAATGGATGCT+CGG | 0.542787 | 2.4:+5502168 | MS.gene31063:CDS |
| TCTTCAGTTACTCCACTGAA+AGG | 0.550039 | 2.4:-5502627 | None:intergenic |
| TGAACACATTATAGATCTTG+TGG | 0.550569 | 2.4:+5502342 | MS.gene31063:intron |
| ACAAATACCTCAACTAAGGC+AGG | 0.553907 | 2.4:-5500755 | None:intergenic |
| ACAGACCAAATTATTTGCCC+AGG | 0.558393 | 2.4:-5500710 | None:intergenic |
| CATTTGGAGAATGGATGCTC+GGG | 0.559246 | 2.4:+5502169 | MS.gene31063:CDS |
| CGTGGATTCCAAGGACAACA+TGG | 0.570880 | 2.4:+5502401 | MS.gene31063:CDS |
| TGGGTGTGCATTTCATTGCA+GGG | 0.573946 | 2.4:+5501425 | MS.gene31063:CDS |
| TTTCATTGCAGGGTTAAGGA+TGG | 0.576994 | 2.4:+5501435 | MS.gene31063:CDS |
| TCAATACCTTCCAAGACTCT+CGG | 0.581013 | 2.4:+5497863 | MS.gene31063:CDS |
| CAGATCGCGATTCTAGGAGC+AGG | 0.582695 | 2.4:+5497825 | MS.gene31063:CDS |
| TGCTACTTACCAGATGCTGC+CGG | 0.584855 | 2.4:-5499603 | None:intergenic |
| TTCAGCTATGACATCTCATG+TGG | 0.585284 | 2.4:+5502025 | MS.gene31063:CDS |
| GATGATATATTATCTGGCGG+TGG | 0.593534 | 2.4:-5502059 | None:intergenic |
| ACATGCCTTGGGTGATCTGG+AGG | 0.596307 | 2.4:-5502212 | None:intergenic |
| GGAACCCTTCAGATTGAGCG+TGG | 0.602295 | 2.4:+5502383 | MS.gene31063:CDS |
| GAATCCACGCTCAATCTGAA+GGG | 0.610146 | 2.4:-5502387 | None:intergenic |
| TCGACAGCTTGTTGGATGTG+AGG | 0.615898 | 2.4:+5501992 | MS.gene31063:intron |
| TGGGCAAATAATTTGGTCTG+TGG | 0.621983 | 2.4:+5500712 | MS.gene31063:CDS |
| TGTCTCCTCCAGATCACCCA+AGG | 0.629643 | 2.4:+5502207 | MS.gene31063:CDS |
| CTTGAGTCTGGATCAAAGCA+GGG | 0.629895 | 2.4:+5503028 | MS.gene31063:CDS |
| ACAGCTTGTTGGATGTGAGG+TGG | 0.631292 | 2.4:+5501995 | MS.gene31063:intron |
| ATGCTCGGGAGTATTTGTAA+TGG | 0.634118 | 2.4:+5502183 | MS.gene31063:CDS |
| TCGCACCCTCGACAAAAGAG+AGG | 0.637493 | 2.4:-5502979 | None:intergenic |
| TGTTTCTGAAAACACCCTCA+AGG | 0.651558 | 2.4:+5502671 | MS.gene31063:CDS |
| AGATCTCCGAGAGTCTTGGA+AGG | 0.674115 | 2.4:-5497869 | None:intergenic |
| ACAGATGATATATTATCTGG+CGG | 0.689783 | 2.4:-5502062 | None:intergenic |
| AGCCAAAACGACAAGAACAG+CGG | 0.710945 | 2.4:-5498042 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAATAATGACATTAAAT+TGG | - | chr2.4:5498799-5498818 | None:intergenic | 10.0% |
| !! | TTAATTAATCAAATATATAG+CGG | + | chr2.4:5499034-5499053 | MS.gene31063:intron | 10.0% |
| !!! | TATAAATCATTTTTCTTTTA+TGG | + | chr2.4:5499671-5499690 | MS.gene31063:intron | 10.0% |
| !!! | TTGAATTTTCTTTAATTTTA+GGG | + | chr2.4:5498962-5498981 | MS.gene31063:intron | 10.0% |
| !!! | TTTGAATTTTCTTTAATTTT+AGG | + | chr2.4:5498961-5498980 | MS.gene31063:intron | 10.0% |
| !! | ATAAATTATAAGCTCAAAAA+TGG | + | chr2.4:5498728-5498747 | MS.gene31063:intron | 15.0% |
| !! | ATATTAGAAACTTAGTAATT+AGG | + | chr2.4:5501926-5501945 | MS.gene31063:intron | 15.0% |
| !! | TAAATTATAAGCTCAAAAAT+GGG | + | chr2.4:5498729-5498748 | MS.gene31063:intron | 15.0% |
| !! | TAATTAATCAAATATATAGC+GGG | + | chr2.4:5499035-5499054 | MS.gene31063:intron | 15.0% |
| !! | TATATAATTGAGAATAAGAA+AGG | - | chr2.4:5502790-5502809 | None:intergenic | 15.0% |
| !!! | AAGAAAGAAATATTTGAAAT+AGG | + | chr2.4:5500114-5500133 | MS.gene31063:intron | 15.0% |
| !!! | AGAAAGAAATATTTGAAATA+GGG | + | chr2.4:5500115-5500134 | MS.gene31063:intron | 15.0% |
| !!! | GTTTTCATAAATAATATCTT+AGG | + | chr2.4:5502456-5502475 | MS.gene31063:intron | 15.0% |
| !!! | TACAATTTTAAGGATTAAAT+TGG | + | chr2.4:5498920-5498939 | MS.gene31063:intron | 15.0% |
| !!! | TTTTTTCAATTAAGATTAGA+GGG | + | chr2.4:5498557-5498576 | MS.gene31063:intron | 15.0% |
| !!! | TTTTTTTCAATTAAGATTAG+AGG | + | chr2.4:5498556-5498575 | MS.gene31063:intron | 15.0% |
| !! | AAAAAAAAAAAAGTTCATGC+TGG | + | chr2.4:5502896-5502915 | MS.gene31063:intron | 20.0% |
| !! | AAAAAAAAAAAGTTCATGCT+GGG | + | chr2.4:5502897-5502916 | MS.gene31063:intron | 20.0% |
| !! | CAAAAGATGAAAAGAATTAA+TGG | + | chr2.4:5501870-5501889 | MS.gene31063:intron | 20.0% |
| !! | CATATACACATAATAGTTAA+TGG | + | chr2.4:5502846-5502865 | MS.gene31063:intron | 20.0% |
| !! | CTATATTGCTAACTTAATTT+AGG | + | chr2.4:5499781-5499800 | MS.gene31063:intron | 20.0% |
| !! | GACAAAATAAATTATGTGAA+TGG | - | chr2.4:5500816-5500835 | None:intergenic | 20.0% |
| !! | GTATTTGGTTATTTATGTTA+AGG | + | chr2.4:5501361-5501380 | MS.gene31063:intron | 20.0% |
| !! | TAAGAAAAAGTTTCTACATT+TGG | + | chr2.4:5500255-5500274 | MS.gene31063:intron | 20.0% |
| !! | TCATAAATAATATCTTAGGT+AGG | + | chr2.4:5502460-5502479 | MS.gene31063:intron | 20.0% |
| !! | TGACTAAATTTCTCTTTATT+TGG | + | chr2.4:5499533-5499552 | MS.gene31063:intron | 20.0% |
| !! | TTAAATTGGTTATTTACTTG+CGG | + | chr2.4:5498934-5498953 | MS.gene31063:intron | 20.0% |
| !! | TTACTAAGTTTCTAATATAG+AGG | - | chr2.4:5501924-5501943 | None:intergenic | 20.0% |
| !! | TTTATGTATTTCCTTATATC+TGG | + | chr2.4:5501249-5501268 | MS.gene31063:intron | 20.0% |
| !!! | ATCTTTTATTTACGTCATTT+TGG | - | chr2.4:5498229-5498248 | None:intergenic | 20.0% |
| !!! | TCACATAATTTATTTTGTCA+GGG | + | chr2.4:5500817-5500836 | MS.gene31063:intron | 20.0% |
| !!! | TTACTTTTATTAGCTTATAG+TGG | - | chr2.4:5498640-5498659 | None:intergenic | 20.0% |
| !!! | TTCACATAATTTATTTTGTC+AGG | + | chr2.4:5500816-5500835 | MS.gene31063:intron | 20.0% |
| !!! | TTGACTAATAAAGACATTTT+TGG | - | chr2.4:5498693-5498712 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTAAGATTAGAG+GGG | + | chr2.4:5498558-5498577 | MS.gene31063:intron | 20.0% |
| !!! | TTTTTTCCCAATAAAGTTTA+GGG | - | chr2.4:5499255-5499274 | None:intergenic | 20.0% |
| ! | AAAAAGTAGTTATGGAAGAA+TGG | - | chr2.4:5498095-5498114 | None:intergenic | 25.0% |
| ! | AAAGTTATCAATGTGATAGA+GGG | - | chr2.4:5500529-5500548 | None:intergenic | 25.0% |
| ! | AACAAATTATCAATTCTTGC+AGG | + | chr2.4:5499328-5499347 | MS.gene31063:intron | 25.0% |
| ! | AACGCTAAATACTTATCTAT+TGG | + | chr2.4:5499955-5499974 | MS.gene31063:intron | 25.0% |
| ! | AAGACAGATGATATATTATC+TGG | - | chr2.4:5502068-5502087 | None:intergenic | 25.0% |
| ! | ACTTCTATACAATGATTTGA+TGG | + | chr2.4:5501953-5501972 | MS.gene31063:intron | 25.0% |
| ! | ATAAAGAGAAATTTAGTCAG+TGG | - | chr2.4:5499532-5499551 | None:intergenic | 25.0% |
| ! | ATAATCTACTTGAATTAGCT+TGG | + | chr2.4:5498608-5498627 | MS.gene31063:intron | 25.0% |
| ! | ATATATTAATCTGATACTGC+AGG | + | chr2.4:5500632-5500651 | MS.gene31063:intron | 25.0% |
| ! | ATTGTAAAATAGTGTCAACT+TGG | - | chr2.4:5498989-5499008 | None:intergenic | 25.0% |
| ! | ATTTCATTATATGATGCTCA+TGG | + | chr2.4:5502582-5502601 | MS.gene31063:CDS | 25.0% |
| ! | CCTAATTAAGAAGATATTTG+AGG | + | chr2.4:5499839-5499858 | MS.gene31063:intron | 25.0% |
| ! | CCTCAAATATCTTCTTAATT+AGG | - | chr2.4:5499842-5499861 | None:intergenic | 25.0% |
| ! | CTTTACTTTCATAAAGTTTG+TGG | - | chr2.4:5501117-5501136 | None:intergenic | 25.0% |
| ! | GAATCTAAATTTGGAGATAA+CGG | + | chr2.4:5497987-5498006 | MS.gene31063:CDS | 25.0% |
| ! | GGTAAAAAAATAGTGAATAG+CGG | + | chr2.4:5498391-5498410 | MS.gene31063:intron | 25.0% |
| ! | GTAAAAAAATAGTGAATAGC+GGG | + | chr2.4:5498392-5498411 | MS.gene31063:intron | 25.0% |
| ! | GTCATTCCAAATACTAATAA+AGG | + | chr2.4:5498819-5498838 | MS.gene31063:intron | 25.0% |
| ! | TAATAGAATCTTAGAAGCTA+GGG | - | chr2.4:5499818-5499837 | None:intergenic | 25.0% |
| ! | TATTCTGGCATAAAAATGAA+GGG | + | chr2.4:5501043-5501062 | MS.gene31063:intron | 25.0% |
| ! | TCAGATAGTAATGAAGATAA+CGG | - | chr2.4:5502544-5502563 | None:intergenic | 25.0% |
| ! | TCATTACATATAAGTGAGAT+GGG | - | chr2.4:5500465-5500484 | None:intergenic | 25.0% |
| ! | TCTCACTTATATGTAATGAA+AGG | + | chr2.4:5500466-5500485 | MS.gene31063:intron | 25.0% |
| ! | TGAAGTAATTGCAAATTAAG+TGG | - | chr2.4:5502508-5502527 | None:intergenic | 25.0% |
| ! | TTAATAGAATCTTAGAAGCT+AGG | - | chr2.4:5499819-5499838 | None:intergenic | 25.0% |
| ! | TTCATTACATATAAGTGAGA+TGG | - | chr2.4:5500466-5500485 | None:intergenic | 25.0% |
| ! | TTCCATACTCAAGTTTATTT+CGG | - | chr2.4:5501668-5501687 | None:intergenic | 25.0% |
| ! | TTCGTACCTTTATTAGTATT+TGG | - | chr2.4:5498828-5498847 | None:intergenic | 25.0% |
| !! | AAATCGTTATCTGAAATTGT+AGG | + | chr2.4:5498257-5498276 | MS.gene31063:intron | 25.0% |
| !! | ATCTGTATTTGTTTAAGTTC+AGG | + | chr2.4:5500979-5500998 | MS.gene31063:intron | 25.0% |
| !! | ATTAACATTTTGCAATTCCA+GGG | + | chr2.4:5498852-5498871 | MS.gene31063:intron | 25.0% |
| !! | CAAATTGCTAACAAACTTTT+TGG | + | chr2.4:5497954-5497973 | MS.gene31063:CDS | 25.0% |
| !! | GACACTATTTTACAATTTGA+AGG | + | chr2.4:5498993-5499012 | MS.gene31063:intron | 25.0% |
| !! | GAGGATAAATTTGAAACTAA+GGG | - | chr2.4:5498769-5498788 | None:intergenic | 25.0% |
| !! | TCTGTATTTGTTTAAGTTCA+GGG | + | chr2.4:5500980-5500999 | MS.gene31063:intron | 25.0% |
| !! | TGATAAATGCTGATTATCTT+TGG | + | chr2.4:5501548-5501567 | MS.gene31063:intron | 25.0% |
| !! | TTCATAAAGTTTGTGGTTTT+AGG | - | chr2.4:5501110-5501129 | None:intergenic | 25.0% |
| !! | TTTTCAATCTCAAATCCATT+TGG | + | chr2.4:5497898-5497917 | MS.gene31063:CDS | 25.0% |
| !!! | AAGGTATTATTTTTCCTTTC+TGG | + | chr2.4:5501380-5501399 | MS.gene31063:intron | 25.0% |
| !!! | ACTAGGTTGATACAATTTTA+AGG | + | chr2.4:5498910-5498929 | MS.gene31063:intron | 25.0% |
| !!! | CTTTTTCAAAACTCAATCAT+TGG | + | chr2.4:5498109-5498128 | MS.gene31063:intron | 25.0% |
| !!! | CTTTTTTCCCAATAAAGTTT+AGG | - | chr2.4:5499256-5499275 | None:intergenic | 25.0% |
| !!! | GAGTTTTGAAAAAGTAGTTA+TGG | - | chr2.4:5498103-5498122 | None:intergenic | 25.0% |
| !!! | TTTGAGTAAATAACTTGTTC+TGG | + | chr2.4:5498307-5498326 | MS.gene31063:intron | 25.0% |
| AAGTCACTACTAAGTATCAT+CGG | - | chr2.4:5500492-5500511 | None:intergenic | 30.0% | |
| AATGGAACCAAAAAATGAGA+AGG | - | chr2.4:5502732-5502751 | None:intergenic | 30.0% | |
| AATGTTTATCCTCAGTCATT+TGG | + | chr2.4:5502153-5502172 | MS.gene31063:intron | 30.0% | |
| ACAGATGATATATTATCTGG+CGG | - | chr2.4:5502065-5502084 | None:intergenic | 30.0% | |
| ACCTTGTCAGTAAAAAAAAG+TGG | - | chr2.4:5500022-5500041 | None:intergenic | 30.0% | |
| AGAAACAAATACCTCAACTA+AGG | - | chr2.4:5500762-5500781 | None:intergenic | 30.0% | |
| AGTGTGCAAGTTATTATAGA+AGG | + | chr2.4:5500874-5500893 | MS.gene31063:CDS | 30.0% | |
| ATCTAGATGTATCTTCACTA+AGG | + | chr2.4:5498360-5498379 | MS.gene31063:intron | 30.0% | |
| ATTCTGGCATAAAAATGAAG+GGG | + | chr2.4:5501044-5501063 | MS.gene31063:intron | 30.0% | |
| CAAGAATCTAATTACCTTGA+GGG | - | chr2.4:5502688-5502707 | None:intergenic | 30.0% | |
| CATCTCACTCAAATTGTTAA+AGG | + | chr2.4:5499355-5499374 | MS.gene31063:CDS | 30.0% | |
| CTATTCTGGCATAAAAATGA+AGG | + | chr2.4:5501042-5501061 | MS.gene31063:intron | 30.0% | |
| CTTAATCAACTCTACTATTC+TGG | + | chr2.4:5501028-5501047 | MS.gene31063:intron | 30.0% | |
| GAAAGTTATCAATGTGATAG+AGG | - | chr2.4:5500530-5500549 | None:intergenic | 30.0% | |
| GCAAATTAAGTGGATATTGA+AGG | - | chr2.4:5502498-5502517 | None:intergenic | 30.0% | |
| GGAAATGTGGAATCTAAATT+TGG | + | chr2.4:5497978-5497997 | MS.gene31063:CDS | 30.0% | |
| GTAACAAATGTCAATACAGT+AGG | - | chr2.4:5499480-5499499 | None:intergenic | 30.0% | |
| TATAGACGAGGAATTTGTAA+TGG | - | chr2.4:5502750-5502769 | None:intergenic | 30.0% | |
| TATATCAGGTGAGCTTATAA+TGG | + | chr2.4:5498448-5498467 | MS.gene31063:intron | 30.0% | |
| TATCTTTGGTCTAATCAACT+GGG | + | chr2.4:5501562-5501581 | MS.gene31063:intron | 30.0% | |
| TATGAGCATATCTACTGTTT+GGG | - | chr2.4:5502283-5502302 | None:intergenic | 30.0% | |
| TATTGGGAAAAAAGAGTCAT+TGG | + | chr2.4:5499262-5499281 | MS.gene31063:intron | 30.0% | |
| TCCAAGAGCTTGAAAAATAA+GGG | - | chr2.4:5500918-5500937 | None:intergenic | 30.0% | |
| TCTATACAATGATTTGATGG+TGG | + | chr2.4:5501956-5501975 | MS.gene31063:intron | 30.0% | |
| TGAACACATTATAGATCTTG+TGG | + | chr2.4:5502342-5502361 | MS.gene31063:intron | 30.0% | |
| TGAAGATACATCTAGATAGA+GGG | - | chr2.4:5498357-5498376 | None:intergenic | 30.0% | |
| TGATAAGCTTAGCTTATATC+AGG | + | chr2.4:5498434-5498453 | MS.gene31063:intron | 30.0% | |
| TGCTAGTATAACCAGATATA+AGG | - | chr2.4:5501263-5501282 | None:intergenic | 30.0% | |
| TGTACTATAGTTACAGTTAC+AGG | + | chr2.4:5502434-5502453 | MS.gene31063:intron | 30.0% | |
| TTATCTTTGGTCTAATCAAC+TGG | + | chr2.4:5501561-5501580 | MS.gene31063:intron | 30.0% | |
| TTATGAGCATATCTACTGTT+TGG | - | chr2.4:5502284-5502303 | None:intergenic | 30.0% | |
| TTATTTGCCTCTCTATTAGA+TGG | + | chr2.4:5500570-5500589 | MS.gene31063:intron | 30.0% | |
| TTGAAATGTTTCTCACTTCA+TGG | + | chr2.4:5501733-5501752 | MS.gene31063:intron | 30.0% | |
| TTGGATGTATTGTATGCATT+GGG | + | chr2.4:5499552-5499571 | MS.gene31063:intron | 30.0% | |
| TTTGGATGTATTGTATGCAT+TGG | + | chr2.4:5499551-5499570 | MS.gene31063:intron | 30.0% | |
| ! | AAACTTTTGTGCTACATGTA+AGG | - | chr2.4:5501321-5501340 | None:intergenic | 30.0% |
| ! | AACTTTTGTGCTACATGTAA+GGG | - | chr2.4:5501320-5501339 | None:intergenic | 30.0% |
| ! | ATAGAGAACTGCTTTCATTT+TGG | + | chr2.4:5501771-5501790 | MS.gene31063:intron | 30.0% |
| ! | ATTGCTAACAAACTTTTTGG+TGG | + | chr2.4:5497957-5497976 | MS.gene31063:CDS | 30.0% |
| ! | CAACAATATTTTCAGACTTC+CGG | - | chr2.4:5502132-5502151 | None:intergenic | 30.0% |
| ! | CGAGGATAAATTTGAAACTA+AGG | - | chr2.4:5498770-5498789 | None:intergenic | 30.0% |
| ! | CTGTATTTGTTTAAGTTCAG+GGG | + | chr2.4:5500981-5501000 | MS.gene31063:intron | 30.0% |
| ! | GATTAACATTTTGCAATTCC+AGG | + | chr2.4:5498851-5498870 | MS.gene31063:intron | 30.0% |
| ! | GTATTTTGTTGCGCAATTTA+TGG | + | chr2.4:5501522-5501541 | MS.gene31063:intron | 30.0% |
| ! | TACGCTAAGAGTTTAGAATA+GGG | - | chr2.4:5500609-5500628 | None:intergenic | 30.0% |
| ! | TGTTTTCTCTCAACAGTATT+TGG | + | chr2.4:5501346-5501365 | MS.gene31063:intron | 30.0% |
| ! | TTACGCTAAGAGTTTAGAAT+AGG | - | chr2.4:5500610-5500629 | None:intergenic | 30.0% |
| ! | TTCTTGCAAGTTTTTACTCA+TGG | + | chr2.4:5502316-5502335 | MS.gene31063:intron | 30.0% |
| ! | TTTTCTGAATCAACTGTTTG+TGG | - | chr2.4:5502823-5502842 | None:intergenic | 30.0% |
| !! | ACATTAAATTGGTAATGTCG+AGG | - | chr2.4:5498788-5498807 | None:intergenic | 30.0% |
| !! | ATTATTTTTCCTTTCTGGCA+GGG | + | chr2.4:5501385-5501404 | MS.gene31063:intron | 30.0% |
| !! | CTCTTTCGTGTTATTTCAAA+GGG | - | chr2.4:5500319-5500338 | None:intergenic | 30.0% |
| !! | CTTATAATGGATAGGTGATA+GGG | + | chr2.4:5498461-5498480 | MS.gene31063:intron | 30.0% |
| !! | CTTTGAAATAACACGAAAGA+GGG | + | chr2.4:5500318-5500337 | MS.gene31063:intron | 30.0% |
| !! | GACATTTTAACCTATGAATC+TGG | + | chr2.4:5500786-5500805 | MS.gene31063:intron | 30.0% |
| !! | TATTATTTTTCCTTTCTGGC+AGG | + | chr2.4:5501384-5501403 | MS.gene31063:intron | 30.0% |
| !! | TTTGCTGGAGTTTATTTTTC+AGG | + | chr2.4:5499295-5499314 | MS.gene31063:intron | 30.0% |
| !!! | AGTTCTACCTTCTCATTTTT+TGG | + | chr2.4:5502722-5502741 | MS.gene31063:intron | 30.0% |
| !!! | ATTGGAATCATGTTTTTTGC+TGG | + | chr2.4:5499280-5499299 | MS.gene31063:intron | 30.0% |
| !!! | TCCTTTTAGTTTAGATGACA+TGG | + | chr2.4:5501170-5501189 | MS.gene31063:intron | 30.0% |
| !!! | TCTTGTTTTTGCATGATTCT+AGG | + | chr2.4:5499714-5499733 | MS.gene31063:intron | 30.0% |
| !!! | TTTCATCTTTTGACTTCCTA+AGG | - | chr2.4:5501862-5501881 | None:intergenic | 30.0% |
| AAAAAAAAGTTCATGCTGGG+AGG | + | chr2.4:5502900-5502919 | MS.gene31063:intron | 35.0% | |
| AAAATGAGAAGGTAGAACTG+AGG | - | chr2.4:5502721-5502740 | None:intergenic | 35.0% | |
| AAGAAACTAATTGCTGACCT+TGG | + | chr2.4:5500841-5500860 | MS.gene31063:CDS | 35.0% | |
| AATACCTATCTAAGTGCTCT+TGG | + | chr2.4:5499184-5499203 | MS.gene31063:intron | 35.0% | |
| AGAAACTAATTGCTGACCTT+GGG | + | chr2.4:5500842-5500861 | MS.gene31063:CDS | 35.0% | |
| ATCTTCACTAAGGTTCTGTT+TGG | + | chr2.4:5498370-5498389 | MS.gene31063:intron | 35.0% | |
| ATGAAATTTCCTGTCTCCTT+AGG | + | chr2.4:5501843-5501862 | MS.gene31063:intron | 35.0% | |
| ATGATTGCTACAAATAGGCT+TGG | - | chr2.4:5500377-5500396 | None:intergenic | 35.0% | |
| CAACTTTCCATCTAATAGAG+AGG | - | chr2.4:5500580-5500599 | None:intergenic | 35.0% | |
| CATGATTTCAAAATGATCCC+TGG | - | chr2.4:5498872-5498891 | None:intergenic | 35.0% | |
| CATTCACTTTCAGTTCATCA+CGG | + | chr2.4:5501225-5501244 | MS.gene31063:intron | 35.0% | |
| CGGAAGTCTGAAAATATTGT+TGG | + | chr2.4:5502130-5502149 | MS.gene31063:intron | 35.0% | |
| CGTTTAAATCAGACAAGCAA+TGG | - | chr2.4:5501694-5501713 | None:intergenic | 35.0% | |
| CTCCAAGAGCTTGAAAAATA+AGG | - | chr2.4:5500919-5500938 | None:intergenic | 35.0% | |
| CTGTAACTATAGTACATACC+AGG | - | chr2.4:5502430-5502449 | None:intergenic | 35.0% | |
| GACTCATGATTGCTACAAAT+AGG | - | chr2.4:5500382-5500401 | None:intergenic | 35.0% | |
| GATGAACAAAGATATAGACG+AGG | - | chr2.4:5502762-5502781 | None:intergenic | 35.0% | |
| GATGATACTTAGTAGTGACT+TGG | + | chr2.4:5500491-5500510 | MS.gene31063:intron | 35.0% | |
| GCAAGAATCTAATTACCTTG+AGG | - | chr2.4:5502689-5502708 | None:intergenic | 35.0% | |
| GCCATGTCATCTAAACTAAA+AGG | - | chr2.4:5501174-5501193 | None:intergenic | 35.0% | |
| GGAGGTTTCATTCTTGATAT+GGG | + | chr2.4:5501406-5501425 | MS.gene31063:CDS | 35.0% | |
| GTGAAGATACATCTAGATAG+AGG | - | chr2.4:5498358-5498377 | None:intergenic | 35.0% | |
| TACAGTAGGATAATGAGTAG+TGG | - | chr2.4:5499466-5499485 | None:intergenic | 35.0% | |
| TACATATAAGTGAGATGGGA+TGG | - | chr2.4:5500461-5500480 | None:intergenic | 35.0% | |
| TAGAGTCATTGAAACTCCAA+GGG | + | chr2.4:5499075-5499094 | MS.gene31063:intron | 35.0% | |
| TCAACTGTTTGTGGTAAGTT+TGG | - | chr2.4:5502814-5502833 | None:intergenic | 35.0% | |
| TCACTCAAATTGTTAAAGGC+TGG | + | chr2.4:5499359-5499378 | MS.gene31063:CDS | 35.0% | |
| TGCAACAATCATTACCTTGA+AGG | - | chr2.4:5499394-5499413 | None:intergenic | 35.0% | |
| TGCCGAAATAAACTTGAGTA+TGG | + | chr2.4:5501663-5501682 | MS.gene31063:intron | 35.0% | |
| TGGATATTGAAGGAAAAGCT+CGG | - | chr2.4:5502488-5502507 | None:intergenic | 35.0% | |
| TGGATGTATTGTATGCATTG+GGG | + | chr2.4:5499553-5499572 | MS.gene31063:intron | 35.0% | |
| TGGATTATGGAATTTCAGCA+GGG | + | chr2.4:5500424-5500443 | MS.gene31063:intron | 35.0% | |
| ! | ATTCACTTCCATTTTGCAGA+AGG | + | chr2.4:5502937-5502956 | MS.gene31063:intron | 35.0% |
| ! | TTCACTTCCATTTTGCAGAA+GGG | + | chr2.4:5502938-5502957 | MS.gene31063:intron | 35.0% |
| ! | TTTGAAACTAAGGGTCTGTT+TGG | - | chr2.4:5498760-5498779 | None:intergenic | 35.0% |
| !! | AAATGTTAACTTGTGCCCTT+GGG | - | chr2.4:5500296-5500315 | None:intergenic | 35.0% |
| !! | CAAACTTTTTGGTGGAAATG+TGG | + | chr2.4:5497965-5497984 | MS.gene31063:CDS | 35.0% |
| !! | CCTCTTTCGTGTTATTTCAA+AGG | - | chr2.4:5500320-5500339 | None:intergenic | 35.0% |
| !! | CCTTTGAAATAACACGAAAG+AGG | + | chr2.4:5500317-5500336 | MS.gene31063:intron | 35.0% |
| !! | GCTTATAATGGATAGGTGAT+AGG | + | chr2.4:5498460-5498479 | MS.gene31063:intron | 35.0% |
| !! | TTCATTTTGGCACCAATTTG+AGG | + | chr2.4:5501784-5501803 | MS.gene31063:intron | 35.0% |
| !!! | ACCCTTATTTTTCAAGCTCT+TGG | + | chr2.4:5500914-5500933 | MS.gene31063:CDS | 35.0% |
| !!! | CAGGGATCATTTTGAAATCA+TGG | + | chr2.4:5498870-5498889 | MS.gene31063:intron | 35.0% |
| !!! | CTTATTTTTCAAGCTCTTGG+AGG | + | chr2.4:5500917-5500936 | MS.gene31063:CDS | 35.0% |
| !!! | GCCACTTTTTTTTACTGACA+AGG | + | chr2.4:5500018-5500037 | MS.gene31063:intron | 35.0% |
| AACAAGCTGTCGAGAGTAAA+AGG | - | chr2.4:5501985-5502004 | None:intergenic | 40.0% | |
| ACAAATACCTCAACTAAGGC+AGG | - | chr2.4:5500758-5500777 | None:intergenic | 40.0% | |
| ACAGACCAAATTATTTGCCC+AGG | - | chr2.4:5500713-5500732 | None:intergenic | 40.0% | |
| AGTCTTGCAGCAGTTATAGT+GGG | + | chr2.4:5500062-5500081 | MS.gene31063:intron | 40.0% | |
| AGTGGTAAAAACACAGGTGT+TGG | + | chr2.4:5499106-5499125 | MS.gene31063:intron | 40.0% | |
| ATCATGAGTTCGACTCCAAA+TGG | - | chr2.4:5497916-5497935 | None:intergenic | 40.0% | |
| ATCCATTCTCCAAATGACTG+AGG | - | chr2.4:5502165-5502184 | None:intergenic | 40.0% | |
| ATCCTCAGTCATTTGGAGAA+TGG | + | chr2.4:5502160-5502179 | MS.gene31063:intron | 40.0% | |
| ATGCTCCTGGGCAAATAATT+TGG | + | chr2.4:5500705-5500724 | MS.gene31063:CDS | 40.0% | |
| ATTTATATTGACCTCCCTCC+AGG | - | chr2.4:5499167-5499186 | None:intergenic | 40.0% | |
| CCCTCACCCTAAACTTTATT+GGG | + | chr2.4:5499246-5499265 | MS.gene31063:intron | 40.0% | |
| CTGGATTATGGAATTTCAGC+AGG | + | chr2.4:5500423-5500442 | MS.gene31063:intron | 40.0% | |
| CTTCAGTTACTCCACTGAAA+GGG | - | chr2.4:5502629-5502648 | None:intergenic | 40.0% | |
| GATCATTTACCACATGCCTT+GGG | - | chr2.4:5502226-5502245 | None:intergenic | 40.0% | |
| GATGATATATTATCTGGCGG+TGG | - | chr2.4:5502062-5502081 | None:intergenic | 40.0% | |
| GCATGCAGACTAAGAAAGTA+TGG | - | chr2.4:5499751-5499770 | None:intergenic | 40.0% | |
| GGATGTATTGTATGCATTGG+GGG | + | chr2.4:5499554-5499573 | MS.gene31063:intron | 40.0% | |
| GGATTATGGAATTTCAGCAG+GGG | + | chr2.4:5500425-5500444 | MS.gene31063:intron | 40.0% | |
| GGGAGGTTTCATTCTTGATA+TGG | + | chr2.4:5501405-5501424 | MS.gene31063:intron | 40.0% | |
| GTAGAGTCATTGAAACTCCA+AGG | + | chr2.4:5499074-5499093 | MS.gene31063:intron | 40.0% | |
| GTTGCATTTAAGCACACTTG+AGG | + | chr2.4:5499917-5499936 | MS.gene31063:intron | 40.0% | |
| TAATGTGCTCATGAAGGACT+AGG | + | chr2.4:5498893-5498912 | MS.gene31063:intron | 40.0% | |
| TACTCCACTGAAAGGGAAAA+AGG | - | chr2.4:5502622-5502641 | None:intergenic | 40.0% | |
| TAGAATCTTAGAAGCTAGGG+AGG | - | chr2.4:5499815-5499834 | None:intergenic | 40.0% | |
| TATATTATCTGGCGGTGGTA+AGG | - | chr2.4:5502057-5502076 | None:intergenic | 40.0% | |
| TCAATACCTTCCAAGACTCT+CGG | + | chr2.4:5497863-5497882 | MS.gene31063:CDS | 40.0% | |
| TCATTGAAACTCCAAGGGAT+TGG | + | chr2.4:5499080-5499099 | MS.gene31063:intron | 40.0% | |
| TCATTTGGAGAATGGATGCT+CGG | + | chr2.4:5502168-5502187 | MS.gene31063:CDS | 40.0% | |
| TCTAATCAACTGGGACTCTT+TGG | + | chr2.4:5501571-5501590 | MS.gene31063:intron | 40.0% | |
| TCTTCAGTTACTCCACTGAA+AGG | - | chr2.4:5502630-5502649 | None:intergenic | 40.0% | |
| TGATCATTTACCACATGCCT+TGG | - | chr2.4:5502227-5502246 | None:intergenic | 40.0% | |
| TGCATTTCATTGCAGGGTTA+AGG | + | chr2.4:5501431-5501450 | MS.gene31063:CDS | 40.0% | |
| TGGGCAAATAATTTGGTCTG+TGG | + | chr2.4:5500712-5500731 | MS.gene31063:CDS | 40.0% | |
| TGGTCTAGTGGTAAAAACAC+AGG | + | chr2.4:5499100-5499119 | MS.gene31063:intron | 40.0% | |
| TTACAGATCGAGCCTCAAAT+TGG | - | chr2.4:5501799-5501818 | None:intergenic | 40.0% | |
| TTCAGCTATGACATCTCATG+TGG | + | chr2.4:5502025-5502044 | MS.gene31063:CDS | 40.0% | |
| TTCCTTAACTTATGCCCCAA+GGG | + | chr2.4:5500278-5500297 | MS.gene31063:intron | 40.0% | |
| TTTATATTGACCTCCCTCCA+GGG | - | chr2.4:5499166-5499185 | None:intergenic | 40.0% | |
| TTTCATTGCAGGGTTAAGGA+TGG | + | chr2.4:5501435-5501454 | MS.gene31063:CDS | 40.0% | |
| ! | AGTTCCTTTTTCCCTTTCAG+TGG | + | chr2.4:5502615-5502634 | MS.gene31063:CDS | 40.0% |
| ! | CCAATAAAGTTTAGGGTGAG+GGG | - | chr2.4:5499248-5499267 | None:intergenic | 40.0% |
| ! | CCCAATAAAGTTTAGGGTGA+GGG | - | chr2.4:5499249-5499268 | None:intergenic | 40.0% |
| ! | GAGAGATGTTGCTCTTTTAG+AGG | + | chr2.4:5503000-5503019 | MS.gene31063:CDS | 40.0% |
| ! | TAGTCTTGCAGCAGTTATAG+TGG | + | chr2.4:5500061-5500080 | MS.gene31063:intron | 40.0% |
| ! | TCATGGTAATGTGCTCATGA+AGG | + | chr2.4:5498887-5498906 | MS.gene31063:intron | 40.0% |
| ! | TCCCAATAAAGTTTAGGGTG+AGG | - | chr2.4:5499250-5499269 | None:intergenic | 40.0% |
| ! | TGGTGGATATGAAGAGAAAC+CGG | + | chr2.4:5499584-5499603 | MS.gene31063:intron | 40.0% |
| ! | TGTTTCTGAAAACACCCTCA+AGG | + | chr2.4:5502671-5502690 | MS.gene31063:CDS | 40.0% |
| ! | TTTAGCGTTAGAAAGTGTGC+AGG | - | chr2.4:5499944-5499963 | None:intergenic | 40.0% |
| ! | TTTTACTCTCGACAGCTTGT+TGG | + | chr2.4:5501984-5502003 | MS.gene31063:intron | 40.0% |
| !! | AAAAACACAGGTGTTGGATC+TGG | + | chr2.4:5499112-5499131 | MS.gene31063:intron | 40.0% |
| !! | AATGTTAACTTGTGCCCTTG+GGG | - | chr2.4:5500295-5500314 | None:intergenic | 40.0% |
| !! | ATGCTCGGGAGTATTTGTAA+TGG | + | chr2.4:5502183-5502202 | MS.gene31063:CDS | 40.0% |
| !! | CAGGTGAGCTTATAATGGAT+AGG | + | chr2.4:5498453-5498472 | MS.gene31063:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | + | chr2.4:5500139-5500158 | MS.gene31063:intron | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | - | chr2.4:5500297-5500316 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | + | chr2.4:5500138-5500157 | MS.gene31063:intron | 40.0% |
| !!! | TTTTGACTTCCTAAGGAGAC+AGG | - | chr2.4:5501855-5501874 | None:intergenic | 40.0% |
| AACGACAAGAACAGCGGTTA+TGG | - | chr2.4:5498039-5498058 | None:intergenic | 45.0% | |
| AGCCAAAACGACAAGAACAG+CGG | - | chr2.4:5498045-5498064 | None:intergenic | 45.0% | |
| ATGGGTGTGCATTTCATTGC+AGG | + | chr2.4:5501424-5501443 | MS.gene31063:CDS | 45.0% | |
| CATTTGGAGAATGGATGCTC+GGG | + | chr2.4:5502169-5502188 | MS.gene31063:CDS | 45.0% | |
| CCAATACAGATCGCGATTCT+AGG | + | chr2.4:5497819-5497838 | MS.gene31063:CDS | 45.0% | |
| CCCCTCACCCTAAACTTTAT+TGG | + | chr2.4:5499245-5499264 | MS.gene31063:intron | 45.0% | |
| CCTAGAATCGCGATCTGTAT+TGG | - | chr2.4:5497822-5497841 | None:intergenic | 45.0% | |
| CTTGAGTCTGGATCAAAGCA+GGG | + | chr2.4:5503028-5503047 | MS.gene31063:CDS | 45.0% | |
| GAATCCACGCTCAATCTGAA+GGG | - | chr2.4:5502390-5502409 | None:intergenic | 45.0% | |
| GAATGGACAGCCAGATTCAT+AGG | - | chr2.4:5500799-5500818 | None:intergenic | 45.0% | |
| GCTGGTAAACATGTCCTTCA+AGG | + | chr2.4:5499377-5499396 | MS.gene31063:CDS | 45.0% | |
| GTCTTGCAGCAGTTATAGTG+GGG | + | chr2.4:5500063-5500082 | MS.gene31063:intron | 45.0% | |
| GTTCCTTAACTTATGCCCCA+AGG | + | chr2.4:5500277-5500296 | MS.gene31063:intron | 45.0% | |
| TACTGCAGGTATAACTGAGC+TGG | + | chr2.4:5500646-5500665 | MS.gene31063:intron | 45.0% | |
| TAGTTTAGATGACATGGCCG+CGG | + | chr2.4:5501176-5501195 | MS.gene31063:intron | 45.0% | |
| TATGCATTGGGGGACTGATT+TGG | + | chr2.4:5499564-5499583 | MS.gene31063:intron | 45.0% | |
| TGCTACAAATAGGCTTGGCT+TGG | - | chr2.4:5500372-5500391 | None:intergenic | 45.0% | |
| TGGGTGTGCATTTCATTGCA+GGG | + | chr2.4:5501425-5501444 | MS.gene31063:CDS | 45.0% | |
| TTACCACTAGACCAATCCCT+TGG | - | chr2.4:5499094-5499113 | None:intergenic | 45.0% | |
| TTAGAGGCAATGCTTGAGTC+TGG | + | chr2.4:5503016-5503035 | MS.gene31063:CDS | 45.0% | |
| TTATATTGACCTCCCTCCAG+GGG | - | chr2.4:5499165-5499184 | None:intergenic | 45.0% | |
| TTGACTTTCTCAGTACTCCG+CGG | - | chr2.4:5501196-5501215 | None:intergenic | 45.0% | |
| ! | ACTTCCATTTTGCAGAAGGG+CGG | + | chr2.4:5502941-5502960 | MS.gene31063:intron | 45.0% |
| ! | GCACACTCATCATTTTCCCA+AGG | - | chr2.4:5500861-5500880 | None:intergenic | 45.0% |
| ! | TTTTGAGCCTGCCTTAGTTG+AGG | + | chr2.4:5500748-5500767 | MS.gene31063:CDS | 45.0% |
| !! | AACCGCTGTTCTTGTCGTTT+TGG | + | chr2.4:5498040-5498059 | MS.gene31063:CDS | 45.0% |
| !! | ATTTTTCCTTTCTGGCAGGG+AGG | + | chr2.4:5501388-5501407 | MS.gene31063:intron | 45.0% |
| !! | CTCCTTAACTTGTGCCCTTA+GGG | - | chr2.4:5500156-5500175 | None:intergenic | 45.0% |
| !! | TCTCCTTAACTTGTGCCCTT+AGG | - | chr2.4:5500157-5500176 | None:intergenic | 45.0% |
| !!! | CGTTTTGGCTGGACAATATC+AGG | + | chr2.4:5498055-5498074 | MS.gene31063:CDS | 45.0% |
| ACAAAAGAGAGGCGATGCTC+AGG | - | chr2.4:5502971-5502990 | None:intergenic | 50.0% | |
| AGATCTCCGAGAGTCTTGGA+AGG | - | chr2.4:5497872-5497891 | None:intergenic | 50.0% | |
| ATGAAACCTCCCTGCCAGAA+AGG | - | chr2.4:5501397-5501416 | None:intergenic | 50.0% | |
| CAGATTGAGCGTGGATTCCA+AGG | + | chr2.4:5502392-5502411 | MS.gene31063:CDS | 50.0% | |
| CCAAGGACAACATGGTTACC+TGG | + | chr2.4:5502409-5502428 | MS.gene31063:CDS | 50.0% | |
| CCAAGGCAGAGAAGACCTTA+GGG | - | chr2.4:5499212-5499231 | None:intergenic | 50.0% | |
| CCAGGTAACCATGTTGTCCT+TGG | - | chr2.4:5502412-5502431 | None:intergenic | 50.0% | |
| CGATTTCTGCTGATGCTCCT+GGG | + | chr2.4:5500693-5500712 | MS.gene31063:CDS | 50.0% | |
| CGTGGATTCCAAGGACAACA+TGG | + | chr2.4:5502401-5502420 | MS.gene31063:CDS | 50.0% | |
| GCTTGAGTCTGGATCAAAGC+AGG | + | chr2.4:5503027-5503046 | MS.gene31063:CDS | 50.0% | |
| GGAATCCACGCTCAATCTGA+AGG | - | chr2.4:5502391-5502410 | None:intergenic | 50.0% | |
| GTATTAAGCTGCACGCTAGC+TGG | + | chr2.4:5500404-5500423 | MS.gene31063:intron | 50.0% | |
| GTGTTGGATCTGGAGGTTTC+GGG | + | chr2.4:5499122-5499141 | MS.gene31063:intron | 50.0% | |
| TAAGTGCTCTTGGAGCCCTA+AGG | + | chr2.4:5499194-5499213 | MS.gene31063:intron | 50.0% | |
| TAGATCTTGTGGCGAGTCGT+TGG | + | chr2.4:5502353-5502372 | MS.gene31063:intron | 50.0% | |
| TCCAAGGCAGAGAAGACCTT+AGG | - | chr2.4:5499213-5499232 | None:intergenic | 50.0% | |
| TCGATTTCTGCTGATGCTCC+TGG | + | chr2.4:5500692-5500711 | MS.gene31063:CDS | 50.0% | |
| TGCCCTTGGGGCATAAGTTA+AGG | - | chr2.4:5500283-5500302 | None:intergenic | 50.0% | |
| TGTGAGATCTCCGAGAGTCT+TGG | - | chr2.4:5497876-5497895 | None:intergenic | 50.0% | |
| ! | ACTGTTTGGGATGCGTAGCA+TGG | - | chr2.4:5502270-5502289 | None:intergenic | 50.0% |
| ! | CATCGCCTCTCTTTTGTCGA+GGG | + | chr2.4:5502974-5502993 | MS.gene31063:CDS | 50.0% |
| ! | CTGTTTGGGATGCGTAGCAT+GGG | - | chr2.4:5502269-5502288 | None:intergenic | 50.0% |
| ! | GGTGTTGGATCTGGAGGTTT+CGG | + | chr2.4:5499121-5499140 | MS.gene31063:intron | 50.0% |
| ! | TGCCCTAAGGGCACAAGTTA+AGG | + | chr2.4:5500151-5500170 | MS.gene31063:intron | 50.0% |
| ! | TGCTACTTACCAGATGCTGC+CGG | - | chr2.4:5499606-5499625 | None:intergenic | 50.0% |
| !! | AACACAGGTGTTGGATCTGG+AGG | + | chr2.4:5499115-5499134 | MS.gene31063:intron | 50.0% |
| !! | ACAGCTTGTTGGATGTGAGG+TGG | + | chr2.4:5501995-5502014 | MS.gene31063:intron | 50.0% |
| !! | ACTCCAAGGGATTGGTCTAG+TGG | + | chr2.4:5499088-5499107 | MS.gene31063:intron | 50.0% |
| !! | GGCTCCAAGAGCACTTAGAT+AGG | - | chr2.4:5499191-5499210 | None:intergenic | 50.0% |
| !! | TCGACAGCTTGTTGGATGTG+AGG | + | chr2.4:5501992-5502011 | MS.gene31063:intron | 50.0% |
| !!! | GCTGTTCTTGTCGTTTTGGC+TGG | + | chr2.4:5498044-5498063 | MS.gene31063:CDS | 50.0% |
| ACATGCCTTGGGTGATCTGG+AGG | - | chr2.4:5502215-5502234 | None:intergenic | 55.0% | |
| ACCACATGCCTTGGGTGATC+TGG | - | chr2.4:5502218-5502237 | None:intergenic | 55.0% | |
| AGGTCTTCTCTGCCTTGGAC+TGG | + | chr2.4:5499214-5499233 | MS.gene31063:intron | 55.0% | |
| CCCTAAGGTCTTCTCTGCCT+TGG | + | chr2.4:5499209-5499228 | MS.gene31063:intron | 55.0% | |
| CTGACCGCCCTTCTGCAAAA+TGG | - | chr2.4:5502948-5502967 | None:intergenic | 55.0% | |
| GAAGAGAAACCGGCAGCATC+TGG | + | chr2.4:5499594-5499613 | MS.gene31063:intron | 55.0% | |
| GCTGCACGCTAGCTGGATTA+TGG | + | chr2.4:5500411-5500430 | MS.gene31063:intron | 55.0% | |
| GGAACCCTTCAGATTGAGCG+TGG | + | chr2.4:5502383-5502402 | MS.gene31063:CDS | 55.0% | |
| GGTCTTCTCTGCCTTGGACT+GGG | + | chr2.4:5499215-5499234 | MS.gene31063:intron | 55.0% | |
| TCCAGATCACCCAAGGCATG+TGG | + | chr2.4:5502214-5502233 | MS.gene31063:intron | 55.0% | |
| TCGCACCCTCGACAAAAGAG+AGG | - | chr2.4:5502982-5503001 | None:intergenic | 55.0% | |
| TGGCGAGTCGTTGGCATGAA+TGG | + | chr2.4:5502362-5502381 | MS.gene31063:CDS | 55.0% | |
| TGTCTCCTCCAGATCACCCA+AGG | + | chr2.4:5502207-5502226 | MS.gene31063:CDS | 55.0% | |
| ! | CAGATCGCGATTCTAGGAGC+AGG | + | chr2.4:5497825-5497844 | MS.gene31063:CDS | 55.0% |
| ! | GCATCGCCTCTCTTTTGTCG+AGG | + | chr2.4:5502973-5502992 | MS.gene31063:CDS | 55.0% |
| !! | GCATTGGGGGACTGATTTGG+TGG | + | chr2.4:5499567-5499586 | MS.gene31063:intron | 55.0% |
| TGTGCACGCGCGCAATTGTC+TGG | + | chr2.4:5499440-5499459 | MS.gene31063:intron | 60.0% | |
| AGCTCTGCTAGTGCCCCTGG+AGG | + | chr2.4:5499149-5499168 | MS.gene31063:intron | 65.0% | |
| CTGAGCTCTGCTAGTGCCCC+TGG | + | chr2.4:5499146-5499165 | MS.gene31063:intron | 65.0% | |
| GCTCTGCTAGTGCCCCTGGA+GGG | + | chr2.4:5499150-5499169 | MS.gene31063:intron | 65.0% | |
| GGGGACAGTGACCCAGTCCA+AGG | - | chr2.4:5499229-5499248 | None:intergenic | 65.0% | |
| CTGCTAGTGCCCCTGGAGGG+AGG | + | chr2.4:5499153-5499172 | MS.gene31063:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 5497813 | 5503078 | 5497813 | ID=MS.gene31063 |
| chr2.4 | mRNA | 5497813 | 5503078 | 5497813 | ID=MS.gene31063.t1;Parent=MS.gene31063 |
| chr2.4 | exon | 5497813 | 5498076 | 5497813 | ID=MS.gene31063.t1.exon1;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5497813 | 5498076 | 5497813 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5499350 | 5499398 | 5499350 | ID=MS.gene31063.t1.exon2;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5499350 | 5499398 | 5499350 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5499598 | 5499615 | 5499598 | ID=MS.gene31063.t1.exon3;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5499598 | 5499615 | 5499598 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5500654 | 5500769 | 5500654 | ID=MS.gene31063.t1.exon4;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5500654 | 5500769 | 5500654 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5500838 | 5500951 | 5500838 | ID=MS.gene31063.t1.exon5;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5500838 | 5500951 | 5500838 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5501406 | 5501456 | 5501406 | ID=MS.gene31063.t1.exon6;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5501406 | 5501456 | 5501406 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5501999 | 5502087 | 5501999 | ID=MS.gene31063.t1.exon7;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5501999 | 5502087 | 5501999 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5502168 | 5502228 | 5502168 | ID=MS.gene31063.t1.exon8;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5502168 | 5502228 | 5502168 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5502356 | 5502430 | 5502356 | ID=MS.gene31063.t1.exon9;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5502356 | 5502430 | 5502356 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5502582 | 5502692 | 5502582 | ID=MS.gene31063.t1.exon10;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5502582 | 5502692 | 5502582 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| chr2.4 | exon | 5502956 | 5503078 | 5502956 | ID=MS.gene31063.t1.exon11;Parent=MS.gene31063.t1 |
| chr2.4 | CDS | 5502956 | 5503078 | 5502956 | ID=cds.MS.gene31063.t1;Parent=MS.gene31063.t1 |
| Gene Sequence |
| Protein sequence |
