AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31122

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31122.t1 MTR_2g097580 97.033 337 8 2 1 336 1 336 0.0 665
MS.gene31122.t1 MTR_3g058630 57.792 308 115 6 41 336 45 349 9.91e-128 369
MS.gene31122.t1 MTR_4g083570 21.629 356 251 11 1 335 1 349 8.89e-14 71.6
MS.gene31122.t1 MTR_3g082050 23.913 322 210 10 43 335 33 348 2.67e-12 67.4
MS.gene31122.t1 MTR_3g081690 24.920 313 195 11 43 321 33 339 3.23e-12 67.0
MS.gene31122.t1 MTR_3g082050 23.913 322 210 10 43 335 56 371 3.50e-12 67.0
MS.gene31122.t1 MTR_3g081690 24.920 313 195 11 43 321 56 362 3.91e-12 67.0
MS.gene31122.t1 MTR_3g082050 23.913 322 210 10 43 335 61 376 4.06e-12 67.0
MS.gene31122.t1 MTR_3g081580 24.351 308 199 10 31 310 31 332 4.89e-12 66.6
MS.gene31122.t1 MTR_5g071990 23.975 317 187 11 50 335 24 317 8.86e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31122.t1 AT5G59520 59.091 352 124 6 3 336 4 353 1.57e-132 382
MS.gene31122.t1 AT1G55910 57.547 318 109 5 28 336 25 325 9.47e-131 376
MS.gene31122.t1 AT2G32270 24.047 341 228 11 11 335 13 338 6.37e-15 75.1
MS.gene31122.t1 AT1G31260 21.067 356 249 7 9 335 11 363 1.21e-14 74.3
MS.gene31122.t1 AT4G19680 23.269 361 239 10 1 335 1 349 3.39e-14 73.2
MS.gene31122.t1 AT4G19690 21.875 352 252 9 1 335 1 346 3.52e-14 72.8
MS.gene31122.t1 AT2G04032 25.538 372 232 15 1 335 1 364 4.55e-14 72.8
MS.gene31122.t1 AT3G12750 22.222 351 231 11 12 335 19 354 1.11e-11 65.5

Find 72 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCCTGCTGTTGTTATTAA+TGG 0.165665 2.4:-6246564 None:intergenic
GGCATCGCCGTTGGAATTTC+AGG 0.231489 2.4:+6245849 MS.gene31122:CDS
GCCTTCATGTTGGCTTGTTC+TGG 0.231810 2.4:+6245603 MS.gene31122:CDS
AATAAGGAACGTTGACTTTA+GGG 0.232919 2.4:-6245271 None:intergenic
GTTTGGTCCTTGTTAAAATA+TGG 0.282576 2.4:+6245391 MS.gene31122:CDS
AAATAAGGAACGTTGACTTT+AGG 0.295702 2.4:-6245272 None:intergenic
TAATTGCAGTTGTCATGATT+TGG 0.312381 2.4:+6246826 MS.gene31122:CDS
CCCTTCTGTTGTTGCGTCGA+TGG 0.338990 2.4:-6246637 None:intergenic
AGCCCAATTGGCGTAGGAAT+TGG 0.343250 2.4:+6246609 MS.gene31122:CDS
ATTCCAATTCCTACGCCAAT+TGG 0.349639 2.4:-6246612 None:intergenic
AAATTTACGTTCGAGGAGTT+TGG 0.351394 2.4:+6245374 MS.gene31122:CDS
GTTTCGACACTCCATGGTTT+AGG 0.355520 2.4:+6246775 MS.gene31122:CDS
TCGTTCCAACGGAAATAATA+AGG 0.363463 2.4:-6245459 None:intergenic
GAACGTTGACTTTAGGGCTT+TGG 0.365709 2.4:-6245265 None:intergenic
AGACTAAGAGACACAAAATA+AGG 0.372662 2.4:-6245287 None:intergenic
CTATTAGGGACACAATTTGC+TGG 0.389492 2.4:+6245492 MS.gene31122:CDS
AATTGCAGTTGTCATGATTT+GGG 0.398612 2.4:+6246827 MS.gene31122:CDS
ATCAATCATTTAATCTCTAA+AGG 0.405525 2.4:+6246726 MS.gene31122:CDS
TTCATGAAGACTACTAATCT+TGG 0.413670 2.4:+6245777 MS.gene31122:CDS
TTTGCTATCTCTAGCCCAAT+TGG 0.420772 2.4:+6246597 MS.gene31122:CDS
TTCAATTCAATCAAAGCTCA+TGG 0.442939 2.4:+6245315 MS.gene31122:CDS
CAAGCCAACATGAAGGCAAA+AGG 0.443986 2.4:-6245597 None:intergenic
TTGGATGTATGCAATATCAA+TGG 0.451469 2.4:+6246671 MS.gene31122:CDS
CGAACGTAAATTTATGTTGT+CGG 0.451852 2.4:-6245364 None:intergenic
CGTTGACTTTAGGGCTTTGG+AGG 0.455192 2.4:-6245262 None:intergenic
TGTCTCCTTATTATTTCCGT+TGG 0.456903 2.4:+6245454 MS.gene31122:CDS
AAGAAGCATGGAGGAATTTG+TGG 0.466479 2.4:+6246469 MS.gene31122:CDS
AGCTTTGATTGAATTGAAGA+AGG 0.475831 2.4:-6245310 None:intergenic
TTCCAATTCCTACGCCAATT+GGG 0.476127 2.4:-6246611 None:intergenic
GAGAACACCTCAAGAAGAAG+AGG 0.481872 2.4:+6245716 MS.gene31122:CDS
ACAACATAAATTTACGTTCG+AGG 0.488053 2.4:+6245367 MS.gene31122:CDS
AATTTATGTTGTCGGAGTCA+TGG 0.509180 2.4:-6245356 None:intergenic
GATATTTGCTGCAATAGCAA+TGG 0.517861 2.4:+6246509 MS.gene31122:CDS
ATATTTGCTGCAATAGCAAT+GGG 0.519706 2.4:+6246510 MS.gene31122:CDS
TGGATGTATGCAATATCAAT+GGG 0.524253 2.4:+6246672 MS.gene31122:CDS
GTCGTTCCCTCTTCTTCTTG+AGG 0.530005 2.4:-6245723 None:intergenic
AAATTAATGATCAGGTACTA+AGG 0.530087 2.4:+6246446 MS.gene31122:intron
CAGAAGGGAGAACAGCGGAT+TGG 0.535719 2.4:+6246652 MS.gene31122:CDS
AACCATGTTTGGTGATTGTG+TGG 0.549871 2.4:+6245635 MS.gene31122:CDS
GCCATCGACGCAACAACAGA+AGG 0.551024 2.4:+6246636 MS.gene31122:CDS
GCTAAAGTTGAGGAACTTGA+AGG 0.551786 2.4:+6245690 MS.gene31122:CDS
GCTCTCATCCATCGCCAACT+CGG 0.559618 2.4:-6245745 None:intergenic
AAGCCAACATGAAGGCAAAA+GGG 0.565308 2.4:-6245596 None:intergenic
GGGAACGACCGAGTTGGCGA+TGG 0.565946 2.4:+6245737 MS.gene31122:CDS
CACCACACAATCACCAAACA+TGG 0.566132 2.4:-6245637 None:intergenic
AGACCATTAATAACAACAGC+AGG 0.566425 2.4:+6246561 MS.gene31122:CDS
GCCGGCGTTTCGACACTCCA+TGG 0.567900 2.4:+6246769 MS.gene31122:CDS
TCAAACCGCAGAGGAAGAGC+CGG 0.577625 2.4:+6246751 MS.gene31122:CDS
CATGTTTGGTGATTGTGTGG+TGG 0.584077 2.4:+6245638 MS.gene31122:CDS
TCCAGAACAAGCCAACATGA+AGG 0.595290 2.4:-6245604 None:intergenic
AAGTTGAGGAACTTGAAGGA+GGG 0.602436 2.4:+6245694 MS.gene31122:CDS
TATGTTGTCGGAGTCATGGT+CGG 0.603695 2.4:-6245352 None:intergenic
TTAGGGACACAATTTGCTGG+TGG 0.603967 2.4:+6245495 MS.gene31122:CDS
TGTAACAAGTAATAATCAGA+GGG 0.605818 2.4:+6245665 MS.gene31122:CDS
AGAAGAGGGAACGACCGAGT+TGG 0.611188 2.4:+6245731 MS.gene31122:CDS
AAAGTTGAGGAACTTGAAGG+AGG 0.613893 2.4:+6245693 MS.gene31122:CDS
ACCATGGAGTGTCGAAACGC+CGG 0.617560 2.4:-6246770 None:intergenic
ATGTAACAAGTAATAATCAG+AGG 0.621888 2.4:+6245664 MS.gene31122:CDS
AGAACACCTCAAGAAGAAGA+GGG 0.622606 2.4:+6245717 MS.gene31122:CDS
ATCTCTAGCCCAATTGGCGT+AGG 0.622666 2.4:+6246603 MS.gene31122:CDS
TTATTATTTCCGTTGGAACG+AGG 0.624370 2.4:+6245461 MS.gene31122:CDS
AAACGCCGGCTCTTCCTCTG+CGG 0.631854 2.4:-6246756 None:intergenic
CAGGTACTAAGGAAGAAGCA+TGG 0.640699 2.4:+6246457 MS.gene31122:intron
CCATCGACGCAACAACAGAA+GGG 0.642467 2.4:+6246637 MS.gene31122:CDS
TCAGAGGGAAGCTAAAGTTG+AGG 0.644763 2.4:+6245680 MS.gene31122:CDS
ATATCAATGGGTATTGCTTG+TGG 0.657971 2.4:+6246684 MS.gene31122:CDS
GAAATAACCTGAAATTCCAA+CGG 0.686017 2.4:-6245856 None:intergenic
CTAAAGGCTTCAAACCGCAG+AGG 0.686420 2.4:+6246742 MS.gene31122:CDS
ACAGCAAGAAACCTAAACCA+TGG 0.706576 2.4:-6246786 None:intergenic
AATTCAATCAAAGCTCATGG+AGG 0.725080 2.4:+6245318 MS.gene31122:CDS
AACAACAGAAGGGAGAACAG+CGG 0.747170 2.4:+6246647 MS.gene31122:CDS
GTACTAAGGAAGAAGCATGG+AGG 0.765390 2.4:+6246460 MS.gene31122:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATACAAATTAATGATC+AGG + chr2.4:6246438-6246457 MS.gene31122:intron 15.0%
!!! ATTTTAACTATTCGTATATA+TGG - chr2.4:6246112-6246131 None:intergenic 15.0%
!!! TTTTAACTATTCGTATATAT+GGG - chr2.4:6246111-6246130 None:intergenic 15.0%
!! ATCAATCATTTAATCTCTAA+AGG + chr2.4:6246726-6246745 MS.gene31122:CDS 20.0%
!!! ATATGCATTTTCATATTGAA+AGG - chr2.4:6246361-6246380 None:intergenic 20.0%
!!! ATTTTAAATAGCATCAAAGT+GGG + chr2.4:6246211-6246230 MS.gene31122:intron 20.0%
!!! TATGCATTTTCATATTGAAA+GGG - chr2.4:6246360-6246379 None:intergenic 20.0%
!!! TATTTTAAATAGCATCAAAG+TGG + chr2.4:6246210-6246229 MS.gene31122:intron 20.0%
!!! TGATAGTCTTTTTCTTTTTT+CGG + chr2.4:6245907-6245926 MS.gene31122:intron 20.0%
!!! TGTATATATGATGTGTTTTA+GGG + chr2.4:6246238-6246257 MS.gene31122:intron 20.0%
! AAATTAATGATCAGGTACTA+AGG + chr2.4:6246446-6246465 MS.gene31122:intron 25.0%
! AAGAAAAAGACTATCAAGAA+AGG - chr2.4:6245903-6245922 None:intergenic 25.0%
! ATGTAACAAGTAATAATCAG+AGG + chr2.4:6245664-6245683 MS.gene31122:CDS 25.0%
! GAAAATTTGATCTTCAACAT+TGG - chr2.4:6245960-6245979 None:intergenic 25.0%
! TGTAACAAGTAATAATCAGA+GGG + chr2.4:6245665-6245684 MS.gene31122:CDS 25.0%
!! CTGTATATATGATGTGTTTT+AGG + chr2.4:6246237-6246256 MS.gene31122:intron 25.0%
!! GATAGTCTTTTTCTTTTTTC+GGG + chr2.4:6245908-6245927 MS.gene31122:intron 25.0%
!!! GTTGTTATTAATGGTCTTTT+TGG - chr2.4:6246558-6246577 None:intergenic 25.0%
!!! TCAAACACCATATTTTAACA+AGG - chr2.4:6245401-6245420 None:intergenic 25.0%
!!! TTGTTTGTTTTCACTTTCTT+AGG + chr2.4:6245426-6245445 MS.gene31122:CDS 25.0%
AATTGCAGTTGTCATGATTT+GGG + chr2.4:6246827-6246846 MS.gene31122:CDS 30.0%
ACAACATAAATTTACGTTCG+AGG + chr2.4:6245367-6245386 MS.gene31122:CDS 30.0%
AGAAAGGATGAAATAAACGA+TGG - chr2.4:6245887-6245906 None:intergenic 30.0%
AGACTAAGAGACACAAAATA+AGG - chr2.4:6245290-6245309 None:intergenic 30.0%
CGAACGTAAATTTATGTTGT+CGG - chr2.4:6245367-6245386 None:intergenic 30.0%
GAAATAACCTGAAATTCCAA+CGG - chr2.4:6245859-6245878 None:intergenic 30.0%
GTTTGGTCCTTGTTAAAATA+TGG + chr2.4:6245391-6245410 MS.gene31122:CDS 30.0%
TAATTGCAGTTGTCATGATT+TGG + chr2.4:6246826-6246845 MS.gene31122:CDS 30.0%
TGACTGTTATGTTACTGTAT+TGG + chr2.4:6246261-6246280 MS.gene31122:intron 30.0%
TGGATGTATGCAATATCAAT+GGG + chr2.4:6246672-6246691 MS.gene31122:CDS 30.0%
TTATGCATTCTTCTCTTTCT+TGG + chr2.4:6246155-6246174 MS.gene31122:intron 30.0%
TTCAATTCAATCAAAGCTCA+TGG + chr2.4:6245315-6245334 MS.gene31122:CDS 30.0%
TTCATGAAGACTACTAATCT+TGG + chr2.4:6245777-6245796 MS.gene31122:CDS 30.0%
TTGGATGTATGCAATATCAA+TGG + chr2.4:6246671-6246690 MS.gene31122:CDS 30.0%
! AACGAGGTTTTTCTTCTATT+AGG + chr2.4:6245477-6245496 MS.gene31122:CDS 30.0%
! AAGTTTGGCATGTGATTTTT+AGG + chr2.4:6246312-6246331 MS.gene31122:intron 30.0%
! ACGAGGTTTTTCTTCTATTA+GGG + chr2.4:6245478-6245497 MS.gene31122:CDS 30.0%
! AGCTTTGATTGAATTGAAGA+AGG - chr2.4:6245313-6245332 None:intergenic 30.0%
! AGTGTTAAAGTATCAAACCT+AGG + chr2.4:6245931-6245950 MS.gene31122:intron 30.0%
! ATATTTGCTGCAATAGCAAT+GGG + chr2.4:6246510-6246529 MS.gene31122:CDS 30.0%
! CATTTTCATATTGAAAGGGA+TGG - chr2.4:6246356-6246375 None:intergenic 30.0%
! GGATATCTTTTAACCATGTT+TGG + chr2.4:6245624-6245643 MS.gene31122:CDS 30.0%
! TATCCTGCTGTTGTTATTAA+TGG - chr2.4:6246567-6246586 None:intergenic 30.0%
! TGTTTTCATTCGGTTTTTGA+AGG + chr2.4:6245828-6245847 MS.gene31122:CDS 30.0%
!! AAATAAGGAACGTTGACTTT+AGG - chr2.4:6245275-6245294 None:intergenic 30.0%
!! AATAAGGAACGTTGACTTTA+GGG - chr2.4:6245274-6245293 None:intergenic 30.0%
!! TTTGTTTTCACTTTCTTAGG+TGG + chr2.4:6245429-6245448 MS.gene31122:CDS 30.0%
!!! TCTTGCACTTTGTTTTCATT+CGG + chr2.4:6245818-6245837 MS.gene31122:CDS 30.0%
AAATTTACGTTCGAGGAGTT+TGG + chr2.4:6245374-6245393 MS.gene31122:CDS 35.0%
AATTCAATCAAAGCTCATGG+AGG + chr2.4:6245318-6245337 MS.gene31122:CDS 35.0%
AATTTATGTTGTCGGAGTCA+TGG - chr2.4:6245359-6245378 None:intergenic 35.0%
AGACCATTAATAACAACAGC+AGG + chr2.4:6246561-6246580 MS.gene31122:CDS 35.0%
AGACTACCAAGAAATGATGT+TGG - chr2.4:6246004-6246023 None:intergenic 35.0%
TCGTTCCAACGGAAATAATA+AGG - chr2.4:6245462-6245481 None:intergenic 35.0%
TGAAGACCAACATCATTTCT+TGG + chr2.4:6245995-6246014 MS.gene31122:intron 35.0%
TGTCTCCTTATTATTTCCGT+TGG + chr2.4:6245454-6245473 MS.gene31122:CDS 35.0%
TTATTATTTCCGTTGGAACG+AGG + chr2.4:6245461-6245480 MS.gene31122:CDS 35.0%
! ATATCAATGGGTATTGCTTG+TGG + chr2.4:6246684-6246703 MS.gene31122:CDS 35.0%
! GATATTTGCTGCAATAGCAA+TGG + chr2.4:6246509-6246528 MS.gene31122:CDS 35.0%
!! ATTGAAAGGGATGGACTATA+TGG - chr2.4:6246347-6246366 None:intergenic 35.0%
AAAGTTGAGGAACTTGAAGG+AGG + chr2.4:6245693-6245712 MS.gene31122:CDS 40.0%
AAGCCAACATGAAGGCAAAA+GGG - chr2.4:6245599-6245618 None:intergenic 40.0%
AAGTTGAGGAACTTGAAGGA+GGG + chr2.4:6245694-6245713 MS.gene31122:CDS 40.0%
ACAGCAAGAAACCTAAACCA+TGG - chr2.4:6246789-6246808 None:intergenic 40.0%
AGAACACCTCAAGAAGAAGA+GGG + chr2.4:6245717-6245736 MS.gene31122:CDS 40.0%
ATTCCAATTCCTACGCCAAT+TGG - chr2.4:6246615-6246634 None:intergenic 40.0%
CTATTAGGGACACAATTTGC+TGG + chr2.4:6245492-6245511 MS.gene31122:CDS 40.0%
GAAGAAAAACCTCGTTCCAA+CGG - chr2.4:6245473-6245492 None:intergenic 40.0%
GCTAAAGTTGAGGAACTTGA+AGG + chr2.4:6245690-6245709 MS.gene31122:CDS 40.0%
GTGACTTTGCATCTCAAGTT+TGG + chr2.4:6246297-6246316 MS.gene31122:intron 40.0%
TTCCAATTCCTACGCCAATT+GGG - chr2.4:6246614-6246633 None:intergenic 40.0%
! AACCATGTTTGGTGATTGTG+TGG + chr2.4:6245635-6245654 MS.gene31122:CDS 40.0%
! AAGAAGCATGGAGGAATTTG+TGG + chr2.4:6246469-6246488 MS.gene31122:CDS 40.0%
! ATCTTCAACATTGGTGACCT+AGG - chr2.4:6245951-6245970 None:intergenic 40.0%
! GGCAAAAGGGTAAGTTTTCT+TGG - chr2.4:6245586-6245605 None:intergenic 40.0%
! TTACCCTTTTGCCTTCATGT+TGG + chr2.4:6245593-6245612 MS.gene31122:CDS 40.0%
! TTTGCTATCTCTAGCCCAAT+TGG + chr2.4:6246597-6246616 MS.gene31122:CDS 40.0%
! TTTGCTGGTGGAGTTTTTCT+TGG + chr2.4:6245507-6245526 MS.gene31122:CDS 40.0%
!! AGGTTTCTTGCTGTGCTTTT+TGG + chr2.4:6246795-6246814 MS.gene31122:CDS 40.0%
AACAACAGAAGGGAGAACAG+CGG + chr2.4:6246647-6246666 MS.gene31122:CDS 45.0%
CAAGCCAACATGAAGGCAAA+AGG - chr2.4:6245600-6245619 None:intergenic 45.0%
CACCACACAATCACCAAACA+TGG - chr2.4:6245640-6245659 None:intergenic 45.0%
CAGGTACTAAGGAAGAAGCA+TGG + chr2.4:6246457-6246476 MS.gene31122:intron 45.0%
GAGAACACCTCAAGAAGAAG+AGG + chr2.4:6245716-6245735 MS.gene31122:CDS 45.0%
GTTTCGACACTCCATGGTTT+AGG + chr2.4:6246775-6246794 MS.gene31122:CDS 45.0%
TATGTTGTCGGAGTCATGGT+CGG - chr2.4:6245355-6245374 None:intergenic 45.0%
TCAGAGGGAAGCTAAAGTTG+AGG + chr2.4:6245680-6245699 MS.gene31122:CDS 45.0%
TCCAGAACAAGCCAACATGA+AGG - chr2.4:6245607-6245626 None:intergenic 45.0%
! CATGTTTGGTGATTGTGTGG+TGG + chr2.4:6245638-6245657 MS.gene31122:CDS 45.0%
! GTACTAAGGAAGAAGCATGG+AGG + chr2.4:6246460-6246479 MS.gene31122:CDS 45.0%
!! GAACGTTGACTTTAGGGCTT+TGG - chr2.4:6245268-6245287 None:intergenic 45.0%
!! TTAGGGACACAATTTGCTGG+TGG + chr2.4:6245495-6245514 MS.gene31122:CDS 45.0%
AGCCCAATTGGCGTAGGAAT+TGG + chr2.4:6246609-6246628 MS.gene31122:CDS 50.0%
ATCTCTAGCCCAATTGGCGT+AGG + chr2.4:6246603-6246622 MS.gene31122:CDS 50.0%
CCATCGACGCAACAACAGAA+GGG + chr2.4:6246637-6246656 MS.gene31122:CDS 50.0%
CTAAAGGCTTCAAACCGCAG+AGG + chr2.4:6246742-6246761 MS.gene31122:CDS 50.0%
GTCGTTCCCTCTTCTTCTTG+AGG - chr2.4:6245726-6245745 None:intergenic 50.0%
!! CGTTGACTTTAGGGCTTTGG+AGG - chr2.4:6245265-6245284 None:intergenic 50.0%
!! GCCTTCATGTTGGCTTGTTC+TGG + chr2.4:6245603-6245622 MS.gene31122:CDS 50.0%
!!! GTTTTTGAAGGCATCGCCGT+TGG + chr2.4:6245840-6245859 MS.gene31122:CDS 50.0%
AGAAGAGGGAACGACCGAGT+TGG + chr2.4:6245731-6245750 MS.gene31122:CDS 55.0%
CAGAAGGGAGAACAGCGGAT+TGG + chr2.4:6246652-6246671 MS.gene31122:CDS 55.0%
CCCTTCTGTTGTTGCGTCGA+TGG - chr2.4:6246640-6246659 None:intergenic 55.0%
GCCATCGACGCAACAACAGA+AGG + chr2.4:6246636-6246655 MS.gene31122:CDS 55.0%
GCTCTCATCCATCGCCAACT+CGG - chr2.4:6245748-6245767 None:intergenic 55.0%
GGCATCGCCGTTGGAATTTC+AGG + chr2.4:6245849-6245868 MS.gene31122:CDS 55.0%
TCAAACCGCAGAGGAAGAGC+CGG + chr2.4:6246751-6246770 MS.gene31122:CDS 55.0%
!! ACCATGGAGTGTCGAAACGC+CGG - chr2.4:6246773-6246792 None:intergenic 55.0%
!! AAACGCCGGCTCTTCCTCTG+CGG - chr2.4:6246759-6246778 None:intergenic 60.0%
GCCGGCGTTTCGACACTCCA+TGG + chr2.4:6246769-6246788 MS.gene31122:CDS 65.0%
! GGGAACGACCGAGTTGGCGA+TGG + chr2.4:6245737-6245756 MS.gene31122:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 6245255 6246854 6245255 ID=MS.gene31122
chr2.4 mRNA 6245255 6246854 6245255 ID=MS.gene31122.t1;Parent=MS.gene31122
chr2.4 exon 6245255 6245870 6245255 ID=MS.gene31122.t1.exon1;Parent=MS.gene31122.t1
chr2.4 CDS 6245255 6245870 6245255 ID=cds.MS.gene31122.t1;Parent=MS.gene31122.t1
chr2.4 exon 6246460 6246854 6246460 ID=MS.gene31122.t1.exon2;Parent=MS.gene31122.t1
chr2.4 CDS 6246460 6246854 6246460 ID=cds.MS.gene31122.t1;Parent=MS.gene31122.t1
Gene Sequence

>MS.gene31122

ATGGCTTCCTCCAAAGCCCTAAAGTCAACGTTCCTTATTTTGTGTCTCTTAGTCTCCTTCTTCAATTCAATCAAAGCTCATGGAGGACACGATGATTCCGACCATGACTCCGACAACATAAATTTACGTTCGAGGAGTTTGGTCCTTGTTAAAATATGGTGTTTGATCATCTTGTTTGTTTTCACTTTCTTAGGTGGCGTGTCTCCTTATTATTTCCGTTGGAACGAGGTTTTTCTTCTATTAGGGACACAATTTGCTGGTGGAGTTTTTCTTGGAACATCTATGATGCATTTCTTGAGTGACTCAAATGAAACTTTTGAAGATCTTACCAAGAAAACTTACCCTTTTGCCTTCATGTTGGCTTGTTCTGGATATCTTTTAACCATGTTTGGTGATTGTGTGGTGGTTTATGTAACAAGTAATAATCAGAGGGAAGCTAAAGTTGAGGAACTTGAAGGAGGGAGAACACCTCAAGAAGAAGAGGGAACGACCGAGTTGGCGATGGATGAGAGCAACGTTGCATTCATGAAGACTACTAATCTTGGAGATACAATTTTGCTTATTCTTGCACTTTGTTTTCATTCGGTTTTTGAAGGCATCGCCGTTGGAATTTCAGGTTATTTCGCACTCCATCGTTTATTTCATCCTTTCTTGATAGTCTTTTTCTTTTTTCGGGAGTGTTAAAGTATCAAACCTAGGTCACCAATGTTGAAGATCAAATTTTCTATCAAGATACTATATGAAGACCAACATCATTTCTTGGTAGTCTATTGTTAGAAGAGAAGTTTTAACAAGAAACGCAATATATTAAGTGCTAGCATGTATAACACTTGCAAACAATAATCATCATTCTCCCATATATACGAATAGTTAAAATTTGATTAGTTAAATATCATATTTTTATGCATTCTTCTCTTTCTTGGATAGATATTTCGAAACAAATAGCAAATTTTTATATTTTAAATAGCATCAAAGTGGGAAGCTGTATATATGATGTGTTTTAGGGTGACTGTTATGTTACTGTATTGGCTAGCTATGAGATGTGACTTTGCATCTCAAGTTTGGCATGTGATTTTTAGGTGAGTGAAACCATATAGTCCATCCCTTTCAATATGAAAATGCATATGATGTTATTTTGAAGCAAATTGATACATTTCATAACTTAATTTGTTTAAACTAATGCTAATATACAAATTAATGATCAGGTACTAAGGAAGAAGCATGGAGGAATTTGTGGACAATATCATTACACAAGATATTTGCTGCAATAGCAATGGGAATCGCGTTGCTAAGAATGTTACCAAAAAGACCATTAATAACAACAGCAGGATATTCATTTGCATTTGCTATCTCTAGCCCAATTGGCGTAGGAATTGGAATTGCCATCGACGCAACAACAGAAGGGAGAACAGCGGATTGGATGTATGCAATATCAATGGGTATTGCTTGTGGTGTTTTTGTTTATGTTGCTATCAATCATTTAATCTCTAAAGGCTTCAAACCGCAGAGGAAGAGCCGGCGTTTCGACACTCCATGGTTTAGGTTTCTTGCTGTGCTTTTTGGTGTTGCTGTAATTGCAGTTGTCATGATTTGGGATTGA
Protein sequence

>MS.gene31122.t1

MASSKALKSTFLILCLLVSFFNSIKAHGGHDDSDHDSDNINLRSRSLVLVKIWCLIILFVFTFLGGVSPYYFRWNEVFLLLGTQFAGGVFLGTSMMHFLSDSNETFEDLTKKTYPFAFMLACSGYLLTMFGDCVVVYVTSNNQREAKVEELEGGRTPQEEEGTTELAMDESNVAFMKTTNLGDTILLILALCFHSVFEGIAVGISGTKEEAWRNLWTISLHKIFAAIAMGIALLRMLPKRPLITTAGYSFAFAISSPIGVGIGIAIDATTEGRTADWMYAISMGIACGVFVYVAINHLISKGFKPQRKSRRFDTPWFRFLAVLFGVAVIAVVMIWD