Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31769.t1 | KEH40371.1 | 69.4 | 324 | 94 | 3 | 1 | 322 | 1 | 321 | 4.80E-117 | 431 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31769.t1 | A0A072VFM9 | 69.4 | 324 | 94 | 3 | 1 | 322 | 1 | 321 | 3.5e-117 | 431.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049346 | MS.gene31769 | 0.81222 | 4.73E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31769.t1 | MTR_1g027950 | 70.679 | 324 | 90 | 4 | 1 | 322 | 1 | 321 | 9.98e-160 | 451 |
MS.gene31769.t1 | MTR_1g027880 | 70.807 | 322 | 82 | 7 | 1 | 321 | 1 | 311 | 1.84e-151 | 427 |
MS.gene31769.t1 | MTR_6g044970 | 63.804 | 326 | 78 | 9 | 1 | 321 | 1 | 291 | 1.92e-130 | 374 |
MS.gene31769.t1 | MTR_1g027710 | 63.363 | 333 | 81 | 10 | 1 | 321 | 1 | 304 | 1.23e-127 | 367 |
MS.gene31769.t1 | MTR_1g028250 | 50.825 | 303 | 107 | 8 | 18 | 314 | 6 | 272 | 9.38e-91 | 272 |
MS.gene31769.t1 | MTR_1g027830 | 50.645 | 310 | 116 | 9 | 10 | 316 | 8 | 283 | 7.28e-89 | 280 |
MS.gene31769.t1 | MTR_3g028640 | 51.203 | 291 | 89 | 9 | 36 | 316 | 14 | 261 | 1.65e-83 | 253 |
MS.gene31769.t1 | MTR_1g027050 | 50.329 | 304 | 121 | 9 | 25 | 302 | 1 | 300 | 1.05e-82 | 265 |
MS.gene31769.t1 | MTR_1g027140 | 49.664 | 298 | 104 | 12 | 36 | 304 | 25 | 305 | 1.20e-75 | 247 |
MS.gene31769.t1 | MTR_1g027030 | 49.515 | 309 | 119 | 9 | 19 | 302 | 9 | 305 | 7.46e-74 | 241 |
MS.gene31769.t1 | MTR_1g027030 | 49.515 | 309 | 119 | 9 | 19 | 302 | 9 | 305 | 2.09e-73 | 241 |
MS.gene31769.t1 | MTR_1g027070 | 47.557 | 307 | 122 | 12 | 15 | 314 | 6 | 280 | 3.65e-72 | 237 |
MS.gene31769.t1 | MTR_1g026950 | 38.636 | 308 | 139 | 8 | 20 | 309 | 1 | 276 | 6.58e-61 | 196 |
MS.gene31769.t1 | MTR_1g027450 | 37.049 | 305 | 141 | 10 | 23 | 314 | 6 | 272 | 1.25e-55 | 182 |
MS.gene31769.t1 | MTR_1g027260 | 38.790 | 281 | 125 | 7 | 34 | 297 | 14 | 264 | 2.04e-55 | 182 |
MS.gene31769.t1 | MTR_1g026970 | 40.613 | 261 | 115 | 7 | 50 | 299 | 31 | 262 | 9.46e-54 | 178 |
MS.gene31769.t1 | MTR_1g027520 | 38.007 | 271 | 119 | 8 | 19 | 275 | 3 | 238 | 2.69e-52 | 172 |
MS.gene31769.t1 | MTR_1g027180 | 38.790 | 281 | 126 | 10 | 34 | 299 | 19 | 268 | 2.73e-51 | 173 |
MS.gene31769.t1 | MTR_1g027380 | 36.786 | 280 | 135 | 6 | 50 | 321 | 30 | 275 | 1.26e-50 | 170 |
MS.gene31769.t1 | MTR_1g027360 | 35.274 | 292 | 135 | 7 | 50 | 323 | 31 | 286 | 7.19e-49 | 166 |
MS.gene31769.t1 | MTR_1g028090 | 37.102 | 283 | 124 | 9 | 47 | 310 | 29 | 276 | 1.28e-42 | 150 |
MS.gene31769.t1 | MTR_1g027990 | 33.438 | 317 | 171 | 13 | 13 | 324 | 7 | 288 | 1.77e-40 | 150 |
MS.gene31769.t1 | MTR_1g028150 | 36.059 | 269 | 121 | 9 | 47 | 301 | 29 | 260 | 3.40e-40 | 142 |
MS.gene31769.t1 | MTR_1g028280 | 35.125 | 279 | 135 | 8 | 21 | 299 | 4 | 236 | 6.80e-40 | 149 |
MS.gene31769.t1 | MTR_1g028280 | 35.125 | 279 | 135 | 8 | 21 | 299 | 4 | 236 | 7.88e-40 | 148 |
MS.gene31769.t1 | MTR_1g027680 | 31.420 | 331 | 174 | 15 | 1 | 324 | 1 | 285 | 4.43e-39 | 146 |
MS.gene31769.t1 | MTR_1g031510 | 33.913 | 230 | 123 | 8 | 53 | 279 | 35 | 238 | 7.19e-23 | 99.8 |
MS.gene31769.t1 | MTR_1g031490 | 33.478 | 230 | 123 | 10 | 55 | 281 | 36 | 238 | 1.44e-20 | 90.1 |
MS.gene31769.t1 | MTR_1g031535 | 29.021 | 286 | 153 | 12 | 20 | 302 | 4 | 242 | 5.98e-20 | 88.2 |
MS.gene31769.t1 | MTR_1g031560 | 31.599 | 269 | 136 | 14 | 22 | 279 | 4 | 235 | 1.11e-19 | 90.1 |
MS.gene31769.t1 | MTR_1g031450 | 29.795 | 292 | 151 | 13 | 14 | 302 | 2 | 242 | 1.57e-18 | 86.3 |
MS.gene31769.t1 | MTR_1g031520 | 32.189 | 233 | 119 | 11 | 55 | 279 | 33 | 234 | 8.89e-17 | 81.3 |
MS.gene31769.t1 | MTR_1g031280 | 30.739 | 257 | 144 | 12 | 39 | 287 | 22 | 252 | 2.10e-16 | 80.5 |
MS.gene31769.t1 | MTR_1g031200 | 42.574 | 101 | 54 | 2 | 37 | 136 | 9 | 106 | 1.04e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 64 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCAATATCAAATCGATTA+TGG | 0.188286 | 1.1:+13603095 | MS.gene31769:CDS |
CAAATCGATTATGGGTATTA+TGG | 0.274093 | 1.1:+13603104 | MS.gene31769:CDS |
ACTATTGTAAGAAGAGAAAT+TGG | 0.275794 | 1.1:-13603057 | None:intergenic |
CATAATCGATTTGATATTGA+TGG | 0.311110 | 1.1:-13603094 | None:intergenic |
GCAATCACCCTCTTCAATTC+CGG | 0.338049 | 1.1:-13603003 | None:intergenic |
CAGCAACCACCATCACAATT+TGG | 0.341915 | 1.1:-13602722 | None:intergenic |
AAAAGCATAATGATAGCTTT+TGG | 0.351683 | 1.1:-13603222 | None:intergenic |
TCAAGCCGCAGTCTATATTA+TGG | 0.355766 | 1.1:-13603511 | None:intergenic |
CTTTCATACGAGGAAATTCA+TGG | 0.368428 | 1.1:+13603428 | MS.gene31769:CDS |
TATGAAGATGAAAACGATCT+TGG | 0.379940 | 1.1:+13603269 | MS.gene31769:CDS |
AGAAATTGGTTGATGTTAAG+AGG | 0.388044 | 1.1:-13603043 | None:intergenic |
ATCAATATCAAATCGATTAT+GGG | 0.394020 | 1.1:+13603096 | MS.gene31769:CDS |
CAATCACCCTCTTCAATTCC+GGG | 0.397957 | 1.1:-13603002 | None:intergenic |
GCTTGTTGCTATGACATCTT+CGG | 0.427497 | 1.1:+13603361 | MS.gene31769:CDS |
AAGATGGTGGACAATATGTT+TGG | 0.448816 | 1.1:-13602800 | None:intergenic |
TTCTGGGCTTCAATTCCAAA+TGG | 0.457782 | 1.1:-13603596 | None:intergenic |
AAGCACTGCTGATCCATGAT+AGG | 0.459048 | 1.1:-13603472 | None:intergenic |
GGGTCATTCTTAAGTCGAAA+TGG | 0.459923 | 1.1:-13602852 | None:intergenic |
TTTGGAGTTCGAGTTGATGC+AGG | 0.462929 | 1.1:-13603204 | None:intergenic |
TGATATTGATTCCGTAGAGC+AGG | 0.467154 | 1.1:-13602685 | None:intergenic |
TTCATAACATTCAATATGTC+CGG | 0.475216 | 1.1:-13603543 | None:intergenic |
CATGAATTTCCTCGTATGAA+AGG | 0.482628 | 1.1:-13603427 | None:intergenic |
ATGAATTTCCTCGTATGAAA+GGG | 0.482848 | 1.1:-13603426 | None:intergenic |
ATGAAGATGAAAACGATCTT+GGG | 0.489524 | 1.1:+13603270 | MS.gene31769:CDS |
TCACAGGATAACTCATACCT+CGG | 0.490964 | 1.1:-13602891 | None:intergenic |
GTTGATGTTAAGAGGTAATG+AGG | 0.491694 | 1.1:-13603035 | None:intergenic |
TCGGATCACCACATGATGTT+GGG | 0.492384 | 1.1:-13602872 | None:intergenic |
TCTACGGATTTAGCCTATCA+TGG | 0.493184 | 1.1:+13603459 | MS.gene31769:CDS |
CTCGGATCACCACATGATGT+TGG | 0.524972 | 1.1:-13602873 | None:intergenic |
GATATTGATTCCGTAGAGCA+GGG | 0.543742 | 1.1:-13602684 | None:intergenic |
GATATCCTTCCCCTGCTCTA+CGG | 0.545723 | 1.1:+13602674 | MS.gene31769:CDS |
CGATTATGGGTATTATGGCG+TGG | 0.549654 | 1.1:+13603109 | MS.gene31769:CDS |
TGCTGCAGACTTCTACGTGA+GGG | 0.554587 | 1.1:+13603244 | MS.gene31769:CDS |
GATTATGGGTATTATGGCGT+GGG | 0.561296 | 1.1:+13603110 | MS.gene31769:CDS |
TCGTATGAAAGGGATCGATC+TGG | 0.563858 | 1.1:-13603416 | None:intergenic |
ACAATTCAGGTAGTTGATCC+CGG | 0.567342 | 1.1:+13602984 | MS.gene31769:CDS |
GAATGATGATCCTGAGTATG+TGG | 0.574657 | 1.1:+13603172 | MS.gene31769:CDS |
TTGGAGTTCGAGTTGATGCA+GGG | 0.579240 | 1.1:-13603203 | None:intergenic |
ATTCATGGAATGCTACTCTA+CGG | 0.580096 | 1.1:+13603443 | MS.gene31769:CDS |
TCATAGCAACAAGCTTCACT+TGG | 0.581621 | 1.1:-13603352 | None:intergenic |
TACAATAGTATCAACGAGGA+TGG | 0.586698 | 1.1:+13603071 | MS.gene31769:CDS |
TTTGGGTAAATACTACGTGA+AGG | 0.590105 | 1.1:+13602941 | MS.gene31769:CDS |
CTTCCTCCAAATTGTGATGG+TGG | 0.595760 | 1.1:+13602716 | MS.gene31769:CDS |
TGTTAAGAGGTAATGAGGAA+TGG | 0.598884 | 1.1:-13603030 | None:intergenic |
AGTTGATCCCGGAATTGAAG+AGG | 0.607068 | 1.1:+13602995 | MS.gene31769:CDS |
GGAGCTGTATCCACATACTC+AGG | 0.616776 | 1.1:-13603182 | None:intergenic |
TGCGGCTTGAATTACAGCAC+CGG | 0.619496 | 1.1:+13603524 | MS.gene31769:CDS |
TTGCTGCAGACTTCTACGTG+AGG | 0.627162 | 1.1:+13603243 | MS.gene31769:CDS |
TGTTCTCTGAAACTGACACT+AGG | 0.632826 | 1.1:-13603389 | None:intergenic |
GTTGATCCCGGAATTGAAGA+GGG | 0.640516 | 1.1:+13602996 | MS.gene31769:CDS |
AAGAATGACCCAACATCATG+TGG | 0.641945 | 1.1:+13602864 | MS.gene31769:CDS |
CAACCACCATCACAATTTGG+AGG | 0.645295 | 1.1:-13602719 | None:intergenic |
TGATTCCGTAGAGCAGGGGA+AGG | 0.648059 | 1.1:-13602679 | None:intergenic |
ATGCTTCCTCCAAATTGTGA+TGG | 0.648693 | 1.1:+13602713 | MS.gene31769:CDS |
ATTGAAGCCCAGAAAAGATG+TGG | 0.649227 | 1.1:+13603605 | MS.gene31769:CDS |
CAACATCATGTGGTGATCCG+AGG | 0.653095 | 1.1:+13602874 | MS.gene31769:CDS |
TGAAAACGATCTTGGGTACG+AGG | 0.653942 | 1.1:+13603277 | MS.gene31769:CDS |
GGTACGAGGAGTCTTACTCT+CGG | 0.657085 | 1.1:+13603291 | MS.gene31769:CDS |
AGTGCTTGCGAAGAATCTTG+CGG | 0.666410 | 1.1:+13603488 | MS.gene31769:CDS |
ATATTGATTCCGTAGAGCAG+GGG | 0.667424 | 1.1:-13602683 | None:intergenic |
AGATCGATCCCTTTCATACG+AGG | 0.671208 | 1.1:+13603418 | MS.gene31769:CDS |
TGCGGCCATAATATAGACTG+CGG | 0.685811 | 1.1:+13603506 | MS.gene31769:CDS |
TATTGTCCACCATCTTCCTG+CGG | 0.721788 | 1.1:+13602807 | MS.gene31769:CDS |
TTCTTACAATAGTATCAACG+AGG | 0.774326 | 1.1:+13603067 | MS.gene31769:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCTTTTTATTTTTAGAAATT+CGG | + | chr1.1:13603642-13603661 | MS.gene31769:intron | 10.0% |
!! | ATCAATATCAAATCGATTAT+GGG | + | chr1.1:13603096-13603115 | MS.gene31769:CDS | 20.0% |
! | ACTATTGTAAGAAGAGAAAT+TGG | - | chr1.1:13603060-13603079 | None:intergenic | 25.0% |
! | CAAAAATCATCATTTAGATC+TGG | - | chr1.1:13603569-13603588 | None:intergenic | 25.0% |
! | CATCAATATCAAATCGATTA+TGG | + | chr1.1:13603095-13603114 | MS.gene31769:CDS | 25.0% |
! | TTCATAACATTCAATATGTC+CGG | - | chr1.1:13603546-13603565 | None:intergenic | 25.0% |
!!! | AAAAGCATAATGATAGCTTT+TGG | - | chr1.1:13603225-13603244 | None:intergenic | 25.0% |
!!! | CATAATCGATTTGATATTGA+TGG | - | chr1.1:13603097-13603116 | None:intergenic | 25.0% |
!!! | GATTTTTGCTATTATCCATT+TGG | + | chr1.1:13603581-13603600 | MS.gene31769:CDS | 25.0% |
ATGAAGATGAAAACGATCTT+GGG | + | chr1.1:13603270-13603289 | MS.gene31769:CDS | 30.0% | |
ATGAATTTCCTCGTATGAAA+GGG | - | chr1.1:13603429-13603448 | None:intergenic | 30.0% | |
CAAATCGATTATGGGTATTA+TGG | + | chr1.1:13603104-13603123 | MS.gene31769:CDS | 30.0% | |
CTACAAAAACTACACAATTC+AGG | + | chr1.1:13602971-13602990 | MS.gene31769:CDS | 30.0% | |
TATGAAGATGAAAACGATCT+TGG | + | chr1.1:13603269-13603288 | MS.gene31769:CDS | 30.0% | |
TTCTTACAATAGTATCAACG+AGG | + | chr1.1:13603067-13603086 | MS.gene31769:CDS | 30.0% | |
TTTACCCAAAAACAGAGTTA+AGG | - | chr1.1:13602931-13602950 | None:intergenic | 30.0% | |
! | AGAAATTGGTTGATGTTAAG+AGG | - | chr1.1:13603046-13603065 | None:intergenic | 30.0% |
! | ATTTCTTACCACATCTTTTC+TGG | - | chr1.1:13603616-13603635 | None:intergenic | 30.0% |
! | TTTCTTACCACATCTTTTCT+GGG | - | chr1.1:13603615-13603634 | None:intergenic | 30.0% |
!! | ACAACCTTAACTCTGTTTTT+GGG | + | chr1.1:13602924-13602943 | MS.gene31769:CDS | 30.0% |
ATTCATGGAATGCTACTCTA+CGG | + | chr1.1:13603443-13603462 | MS.gene31769:CDS | 35.0% | |
CATGAATTTCCTCGTATGAA+AGG | - | chr1.1:13603430-13603449 | None:intergenic | 35.0% | |
CTTTCATACGAGGAAATTCA+TGG | + | chr1.1:13603428-13603447 | MS.gene31769:CDS | 35.0% | |
GTTGATGTTAAGAGGTAATG+AGG | - | chr1.1:13603038-13603057 | None:intergenic | 35.0% | |
TACAATAGTATCAACGAGGA+TGG | + | chr1.1:13603071-13603090 | MS.gene31769:CDS | 35.0% | |
TGTTAAGAGGTAATGAGGAA+TGG | - | chr1.1:13603033-13603052 | None:intergenic | 35.0% | |
TTTGGGTAAATACTACGTGA+AGG | + | chr1.1:13602941-13602960 | MS.gene31769:CDS | 35.0% | |
! | CACAACCTTAACTCTGTTTT+TGG | + | chr1.1:13602923-13602942 | MS.gene31769:CDS | 35.0% |
!! | AAGATGGTGGACAATATGTT+TGG | - | chr1.1:13602803-13602822 | None:intergenic | 35.0% |
AAGAATGACCCAACATCATG+TGG | + | chr1.1:13602864-13602883 | MS.gene31769:CDS | 40.0% | |
ACAATTCAGGTAGTTGATCC+CGG | + | chr1.1:13602984-13603003 | MS.gene31769:CDS | 40.0% | |
ATGCTTCCTCCAAATTGTGA+TGG | + | chr1.1:13602713-13602732 | MS.gene31769:CDS | 40.0% | |
ATTGAAGCCCAGAAAAGATG+TGG | + | chr1.1:13603605-13603624 | MS.gene31769:CDS | 40.0% | |
GAATGATGATCCTGAGTATG+TGG | + | chr1.1:13603172-13603191 | MS.gene31769:CDS | 40.0% | |
GATTATGGGTATTATGGCGT+GGG | + | chr1.1:13603110-13603129 | MS.gene31769:CDS | 40.0% | |
GGAAAAACTACTTGTCAGCT+GGG | + | chr1.1:13603312-13603331 | MS.gene31769:CDS | 40.0% | |
GGGTCATTCTTAAGTCGAAA+TGG | - | chr1.1:13602855-13602874 | None:intergenic | 40.0% | |
TCAAGCCGCAGTCTATATTA+TGG | - | chr1.1:13603514-13603533 | None:intergenic | 40.0% | |
TCACAGGATAACTCATACCT+CGG | - | chr1.1:13602894-13602913 | None:intergenic | 40.0% | |
TCATAGCAACAAGCTTCACT+TGG | - | chr1.1:13603355-13603374 | None:intergenic | 40.0% | |
TCTACGGATTTAGCCTATCA+TGG | + | chr1.1:13603459-13603478 | MS.gene31769:CDS | 40.0% | |
TTCTGGGCTTCAATTCCAAA+TGG | - | chr1.1:13603599-13603618 | None:intergenic | 40.0% | |
! | GCTTGTTGCTATGACATCTT+CGG | + | chr1.1:13603361-13603380 | MS.gene31769:CDS | 40.0% |
!! | ATATTGATTCCGTAGAGCAG+GGG | - | chr1.1:13602686-13602705 | None:intergenic | 40.0% |
!! | GATATTGATTCCGTAGAGCA+GGG | - | chr1.1:13602687-13602706 | None:intergenic | 40.0% |
!! | TGATATTGATTCCGTAGAGC+AGG | - | chr1.1:13602688-13602707 | None:intergenic | 40.0% |
!! | TGTTCTCTGAAACTGACACT+AGG | - | chr1.1:13603392-13603411 | None:intergenic | 40.0% |
!!! | GGTTGTGATGTTGTTTTCAC+AGG | - | chr1.1:13602910-13602929 | None:intergenic | 40.0% |
AGATCGATCCCTTTCATACG+AGG | + | chr1.1:13603418-13603437 | MS.gene31769:CDS | 45.0% | |
AGTGCTTGCGAAGAATCTTG+CGG | + | chr1.1:13603488-13603507 | MS.gene31769:CDS | 45.0% | |
AGTTGATCCCGGAATTGAAG+AGG | + | chr1.1:13602995-13603014 | MS.gene31769:CDS | 45.0% | |
CAACCACCATCACAATTTGG+AGG | - | chr1.1:13602722-13602741 | None:intergenic | 45.0% | |
CAATCACCCTCTTCAATTCC+GGG | - | chr1.1:13603005-13603024 | None:intergenic | 45.0% | |
CAGCAACCACCATCACAATT+TGG | - | chr1.1:13602725-13602744 | None:intergenic | 45.0% | |
CGATTATGGGTATTATGGCG+TGG | + | chr1.1:13603109-13603128 | MS.gene31769:CDS | 45.0% | |
CGGAAAAACTACTTGTCAGC+TGG | + | chr1.1:13603311-13603330 | MS.gene31769:CDS | 45.0% | |
CTTCCTCCAAATTGTGATGG+TGG | + | chr1.1:13602716-13602735 | MS.gene31769:CDS | 45.0% | |
GCAATCACCCTCTTCAATTC+CGG | - | chr1.1:13603006-13603025 | None:intergenic | 45.0% | |
GTTGATCCCGGAATTGAAGA+GGG | + | chr1.1:13602996-13603015 | MS.gene31769:CDS | 45.0% | |
TATTGTCCACCATCTTCCTG+CGG | + | chr1.1:13602807-13602826 | MS.gene31769:CDS | 45.0% | |
TCGGATCACCACATGATGTT+GGG | - | chr1.1:13602875-13602894 | None:intergenic | 45.0% | |
TCGTATGAAAGGGATCGATC+TGG | - | chr1.1:13603419-13603438 | None:intergenic | 45.0% | |
TGAAAACGATCTTGGGTACG+AGG | + | chr1.1:13603277-13603296 | MS.gene31769:CDS | 45.0% | |
TGCGGCCATAATATAGACTG+CGG | + | chr1.1:13603506-13603525 | MS.gene31769:CDS | 45.0% | |
! | AAGCACTGCTGATCCATGAT+AGG | - | chr1.1:13603475-13603494 | None:intergenic | 45.0% |
! | ATTTTTCCGCAGGAAGATGG+TGG | - | chr1.1:13602816-13602835 | None:intergenic | 45.0% |
! | CTGATTTTTCCGCAGGAAGA+TGG | - | chr1.1:13602819-13602838 | None:intergenic | 45.0% |
!! | TTGGAGTTCGAGTTGATGCA+GGG | - | chr1.1:13603206-13603225 | None:intergenic | 45.0% |
!! | TTTGGAGTTCGAGTTGATGC+AGG | - | chr1.1:13603207-13603226 | None:intergenic | 45.0% |
!!! | GATGTTGCTGATTTTTCCGC+AGG | - | chr1.1:13602826-13602845 | None:intergenic | 45.0% |
CAACATCATGTGGTGATCCG+AGG | + | chr1.1:13602874-13602893 | MS.gene31769:CDS | 50.0% | |
CTCGGATCACCACATGATGT+TGG | - | chr1.1:13602876-13602895 | None:intergenic | 50.0% | |
GATATCCTTCCCCTGCTCTA+CGG | + | chr1.1:13602674-13602693 | MS.gene31769:CDS | 50.0% | |
GGAGCTGTATCCACATACTC+AGG | - | chr1.1:13603185-13603204 | None:intergenic | 50.0% | |
GGTACGAGGAGTCTTACTCT+CGG | + | chr1.1:13603291-13603310 | MS.gene31769:CDS | 50.0% | |
TGCGGCTTGAATTACAGCAC+CGG | + | chr1.1:13603524-13603543 | MS.gene31769:CDS | 50.0% | |
TGCTGCAGACTTCTACGTGA+GGG | + | chr1.1:13603244-13603263 | MS.gene31769:CDS | 50.0% | |
TTGCTGCAGACTTCTACGTG+AGG | + | chr1.1:13603243-13603262 | MS.gene31769:CDS | 50.0% | |
TGATTCCGTAGAGCAGGGGA+AGG | - | chr1.1:13602682-13602701 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 13602663 | 13603667 | 13602663 | ID=MS.gene31769 |
chr1.1 | mRNA | 13602663 | 13603667 | 13602663 | ID=MS.gene31769.t1;Parent=MS.gene31769 |
chr1.1 | exon | 13602663 | 13603626 | 13602663 | ID=MS.gene31769.t1.exon1;Parent=MS.gene31769.t1 |
chr1.1 | CDS | 13602663 | 13603626 | 13602663 | ID=cds.MS.gene31769.t1;Parent=MS.gene31769.t1 |
chr1.1 | exon | 13603657 | 13603667 | 13603657 | ID=MS.gene31769.t1.exon2;Parent=MS.gene31769.t1 |
chr1.1 | CDS | 13603657 | 13603667 | 13603657 | ID=cds.MS.gene31769.t1;Parent=MS.gene31769.t1 |
Gene Sequence |
Protein sequence |