Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32076.t1 | XP_003590693.1 | 99.5 | 417 | 2 | 0 | 1 | 417 | 1 | 417 | 2.40E-222 | 781.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32076.t1 | Q9M8J9 | 75.3 | 377 | 93 | 0 | 39 | 415 | 30 | 406 | 3.5e-169 | 595.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32076.t1 | G7I2K6 | 99.5 | 417 | 2 | 0 | 1 | 417 | 1 | 417 | 1.8e-222 | 781.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32076 | MS.gene60766 | PPI |
| MS.gene32076 | MS.gene006074 | PPI |
| MS.gene32076 | MS.gene88846 | PPI |
| MS.gene33918 | MS.gene32076 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32076.t1 | MTR_1g072650 | 99.520 | 417 | 2 | 0 | 1 | 417 | 1 | 417 | 0.0 | 865 |
| MS.gene32076.t1 | MTR_7g094490 | 88.647 | 414 | 43 | 1 | 1 | 414 | 1 | 410 | 0.0 | 730 |
| MS.gene32076.t1 | MTR_5g087500 | 57.545 | 391 | 149 | 6 | 33 | 413 | 23 | 406 | 2.30e-154 | 442 |
| MS.gene32076.t1 | MTR_7g086500 | 57.143 | 385 | 157 | 4 | 36 | 415 | 13 | 394 | 1.46e-145 | 421 |
| MS.gene32076.t1 | MTR_5g087500 | 61.027 | 331 | 120 | 5 | 33 | 359 | 23 | 348 | 9.75e-141 | 405 |
| MS.gene32076.t1 | MTR_5g087500 | 60.486 | 329 | 122 | 4 | 33 | 357 | 23 | 347 | 3.54e-140 | 404 |
| MS.gene32076.t1 | MTR_7g086500 | 59.627 | 322 | 124 | 3 | 36 | 354 | 13 | 331 | 8.24e-129 | 375 |
| MS.gene32076.t1 | MTR_4g009630 | 60.335 | 179 | 71 | 0 | 39 | 217 | 23 | 201 | 8.09e-71 | 227 |
| MS.gene32076.t1 | MTR_4g009630 | 60.335 | 179 | 71 | 0 | 39 | 217 | 23 | 201 | 1.00e-69 | 225 |
| MS.gene32076.t1 | MTR_3g069000 | 54.595 | 185 | 84 | 0 | 204 | 388 | 51 | 235 | 1.03e-59 | 196 |
| MS.gene32076.t1 | MTR_1g104870 | 31.098 | 164 | 89 | 4 | 191 | 348 | 519 | 664 | 3.84e-15 | 77.8 |
| MS.gene32076.t1 | MTR_5g005940 | 30.435 | 161 | 94 | 3 | 191 | 348 | 516 | 661 | 5.77e-14 | 74.3 |
| MS.gene32076.t1 | MTR_7g094900 | 28.395 | 162 | 96 | 4 | 191 | 348 | 525 | 670 | 2.91e-13 | 72.0 |
| MS.gene32076.t1 | MTR_7g094910 | 28.395 | 162 | 96 | 4 | 191 | 348 | 506 | 651 | 3.74e-13 | 71.6 |
| MS.gene32076.t1 | MTR_3g088660 | 27.568 | 185 | 113 | 5 | 205 | 383 | 74 | 243 | 1.14e-12 | 68.2 |
| MS.gene32076.t1 | MTR_3g061090 | 26.627 | 169 | 109 | 3 | 184 | 350 | 66 | 221 | 5.39e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32076.t1 | AT3G06190 | 72.372 | 409 | 109 | 1 | 7 | 415 | 2 | 406 | 0.0 | 624 |
| MS.gene32076.t1 | AT5G19000 | 72.606 | 376 | 103 | 0 | 40 | 415 | 32 | 407 | 0.0 | 591 |
| MS.gene32076.t1 | AT5G19000 | 72.606 | 376 | 103 | 0 | 40 | 415 | 32 | 407 | 0.0 | 591 |
| MS.gene32076.t1 | AT5G19000 | 66.423 | 411 | 103 | 1 | 40 | 415 | 32 | 442 | 0.0 | 574 |
| MS.gene32076.t1 | AT3G06190 | 72.571 | 350 | 92 | 1 | 7 | 356 | 2 | 347 | 0.0 | 538 |
| MS.gene32076.t1 | AT2G39760 | 60.955 | 356 | 138 | 1 | 27 | 382 | 11 | 365 | 2.06e-165 | 471 |
| MS.gene32076.t1 | AT3G03740 | 60.274 | 365 | 134 | 4 | 22 | 382 | 31 | 388 | 3.08e-153 | 442 |
| MS.gene32076.t1 | AT2G39760 | 61.280 | 328 | 126 | 1 | 27 | 354 | 11 | 337 | 8.47e-152 | 434 |
| MS.gene32076.t1 | AT2G39760 | 61.280 | 328 | 126 | 1 | 27 | 354 | 11 | 337 | 8.47e-152 | 434 |
| MS.gene32076.t1 | AT2G39760 | 61.280 | 328 | 126 | 1 | 27 | 354 | 11 | 337 | 9.22e-152 | 433 |
| MS.gene32076.t1 | AT3G43700 | 52.927 | 410 | 177 | 7 | 16 | 413 | 8 | 413 | 3.37e-145 | 419 |
| MS.gene32076.t1 | AT5G21010 | 52.068 | 411 | 181 | 6 | 15 | 413 | 2 | 408 | 2.26e-141 | 409 |
| MS.gene32076.t1 | AT3G43700 | 55.524 | 353 | 144 | 6 | 16 | 359 | 8 | 356 | 2.61e-133 | 387 |
| MS.gene32076.t1 | AT3G43700 | 56.322 | 348 | 139 | 6 | 16 | 354 | 8 | 351 | 2.97e-133 | 387 |
| MS.gene32076.t1 | AT3G06190 | 65.188 | 293 | 91 | 3 | 7 | 292 | 2 | 290 | 7.16e-133 | 384 |
| MS.gene32076.t1 | AT3G06190 | 71.154 | 260 | 71 | 1 | 7 | 266 | 2 | 257 | 1.98e-132 | 382 |
| MS.gene32076.t1 | AT3G06190 | 70.472 | 254 | 71 | 1 | 7 | 260 | 2 | 251 | 5.75e-126 | 366 |
| MS.gene32076.t1 | AT3G06190 | 59.649 | 57 | 23 | 0 | 359 | 415 | 239 | 295 | 1.50e-13 | 71.2 |
| MS.gene32076.t1 | AT5G19330 | 29.193 | 161 | 96 | 3 | 191 | 348 | 521 | 666 | 1.29e-15 | 79.3 |
| MS.gene32076.t1 | AT5G13060 | 26.368 | 201 | 133 | 3 | 189 | 388 | 546 | 732 | 7.28e-14 | 73.9 |
Find 86 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTAAGACAGTTATCTTTA+AGG | 0.101359 | 1.2:+55488161 | None:intergenic |
| CATTGCTTCATGTTATATAT+TGG | 0.188490 | 1.2:-55486989 | MS.gene32076:CDS |
| CTCTCAAAAGGGATTGGAAT+TGG | 0.250201 | 1.2:-55489176 | MS.gene32076:CDS |
| ATTGGAATTGAAAATGCTTT+AGG | 0.257927 | 1.2:+55488097 | None:intergenic |
| TTACTGGGATTAACTCAAAA+TGG | 0.277584 | 1.2:-55486941 | MS.gene32076:CDS |
| TCTACTATTGGTCACCAGTT+TGG | 0.278284 | 1.2:-55488067 | MS.gene32076:CDS |
| ATTGCTTCATGTTATATATT+GGG | 0.290116 | 1.2:-55486988 | MS.gene32076:CDS |
| TCACCAGTTTGGGAAGCTTT+TGG | 0.292881 | 1.2:-55488056 | MS.gene32076:CDS |
| TTGGAATTGAAAATGCTTTA+GGG | 0.298549 | 1.2:+55488098 | None:intergenic |
| CCTGACATGCAAGAGCTTAC+TGG | 0.322826 | 1.2:-55486957 | MS.gene32076:CDS |
| CGAGTGAAGGGACTGATGTT+AGG | 0.326194 | 1.2:-55489034 | MS.gene32076:CDS |
| CCAATATCACCTTCTACTAT+TGG | 0.326476 | 1.2:-55488079 | MS.gene32076:CDS |
| CTACTATTGGTCACCAGTTT+GGG | 0.329635 | 1.2:-55488066 | MS.gene32076:CDS |
| GAACCTATGTGAGCCTTTGA+TGG | 0.352408 | 1.2:+55489217 | None:intergenic |
| CCACGATATTTCAACGTATA+AGG | 0.352677 | 1.2:+55488924 | None:intergenic |
| CATCAGCCTAAGTCTATCTA+AGG | 0.367304 | 1.2:+55486869 | None:intergenic |
| CTTGATGGCAGTGATGTAAA+TGG | 0.372844 | 1.2:-55485485 | MS.gene32076:CDS |
| CCAATAGTAGAAGGTGATAT+TGG | 0.380995 | 1.2:+55488079 | None:intergenic |
| CCAGTAAGCTCTTGCATGTC+AGG | 0.381423 | 1.2:+55486957 | None:intergenic |
| TTTCCAAAAGCTTCCCAAAC+TGG | 0.384496 | 1.2:+55488053 | None:intergenic |
| TCACATAGGTTCAAGATAAC+GGG | 0.392891 | 1.2:-55489206 | MS.gene32076:CDS |
| ATTATTTAAACCTTGAAAAC+GGG | 0.395746 | 1.2:+55487872 | None:intergenic |
| AATTATTTAAACCTTGAAAA+CGG | 0.403166 | 1.2:+55487871 | None:intergenic |
| CGTGGCTACAACTTTAGCTT+TGG | 0.416152 | 1.2:-55486808 | MS.gene32076:CDS |
| TCTCAAAAGGGATTGGAATT+GGG | 0.424168 | 1.2:-55489175 | MS.gene32076:CDS |
| GATGTTGAGGAGGTTGTTGA+TGG | 0.428183 | 1.2:+55489251 | None:intergenic |
| GGCTAGATTTACTGAGCATT+CGG | 0.434481 | 1.2:-55485540 | MS.gene32076:CDS |
| CACCGTTGGTGGGTACGAAT+GGG | 0.437086 | 1.2:-55489129 | MS.gene32076:CDS |
| TCACCGTTGGTGGGTACGAA+TGG | 0.438080 | 1.2:-55489130 | MS.gene32076:CDS |
| ACGGGGTATTCACTCTCAAA+AGG | 0.441675 | 1.2:-55489188 | MS.gene32076:CDS |
| TCAAACAGACTGCTTTCAGC+TGG | 0.445729 | 1.2:+55486766 | None:intergenic |
| TTCATCGCGCTTGCGAGTGA+AGG | 0.449539 | 1.2:-55489047 | MS.gene32076:CDS |
| CTCACATAGGTTCAAGATAA+CGG | 0.449878 | 1.2:-55489207 | MS.gene32076:CDS |
| AAAATGGGCAACTACCTTGA+TGG | 0.450276 | 1.2:-55486925 | MS.gene32076:CDS |
| CTGACATGCAAGAGCTTACT+GGG | 0.457209 | 1.2:-55486956 | MS.gene32076:CDS |
| TGATGGTTTCGAGTACTTGA+AGG | 0.459553 | 1.2:-55485603 | MS.gene32076:CDS |
| TGTGTGTTCTGATCTTTCAT+AGG | 0.465282 | 1.2:+55487923 | None:intergenic |
| TATTCACTCTCAAAAGGGAT+TGG | 0.480986 | 1.2:-55489182 | MS.gene32076:CDS |
| AACTGGTGACCAATAGTAGA+AGG | 0.481007 | 1.2:+55488070 | None:intergenic |
| GAGGTTGTTGATGGAATTGA+GGG | 0.492292 | 1.2:+55489260 | None:intergenic |
| GAGTGAAGGGACTGATGTTA+GGG | 0.509324 | 1.2:-55489033 | MS.gene32076:CDS |
| CTTCGTTCCTATGCTTGCAC+AGG | 0.511010 | 1.2:+55485513 | None:intergenic |
| AGATGATGATGATGAATTTG+AGG | 0.513479 | 1.2:+55489298 | None:intergenic |
| GGAGGTTGTTGATGGAATTG+AGG | 0.515360 | 1.2:+55489259 | None:intergenic |
| ATCTGCTAGCAGCAGCTGAT+CGG | 0.518356 | 1.2:-55486896 | MS.gene32076:CDS |
| TACTGGGATTAACTCAAAAT+GGG | 0.520060 | 1.2:-55486940 | MS.gene32076:CDS |
| CGGGGTATTCACTCTCAAAA+GGG | 0.521264 | 1.2:-55489187 | MS.gene32076:CDS |
| TCATCGCGCTTGCGAGTGAA+GGG | 0.522765 | 1.2:-55489046 | MS.gene32076:CDS |
| TCTGTTTGAAATTCATTGCA+AGG | 0.524584 | 1.2:-55486752 | MS.gene32076:CDS |
| AAAAGCTCAGTCAAAACAGA+TGG | 0.526627 | 1.2:+55485572 | None:intergenic |
| CTTAGTGTTAATTGTAGCGT+TGG | 0.538942 | 1.2:-55488145 | MS.gene32076:CDS |
| GATGGAATTGAGGGTGGTGA+TGG | 0.542993 | 1.2:+55489269 | None:intergenic |
| AGGAACGAAGCAATACTTGA+TGG | 0.545226 | 1.2:-55485500 | MS.gene32076:CDS |
| GAGTGGGAAAGAGAGGCATA+AGG | 0.552695 | 1.2:-55488982 | MS.gene32076:CDS |
| CTGCTTTCAGCTGGAAACAA+TGG | 0.557661 | 1.2:+55486775 | None:intergenic |
| TGGATCAGAGTGGGAAAGAG+AGG | 0.559531 | 1.2:-55488989 | MS.gene32076:CDS |
| TAGCAGATGCTGAGCCATCA+AGG | 0.560135 | 1.2:+55486911 | None:intergenic |
| TTTGATAGGACGTTGGAGAG+TGG | 0.581385 | 1.2:-55488948 | MS.gene32076:CDS |
| CGGACTTCCTGTGCAAGCAT+AGG | 0.582301 | 1.2:-55485520 | MS.gene32076:CDS |
| ATGTGAGCCTTTGATGGTGT+CGG | 0.584850 | 1.2:+55489223 | None:intergenic |
| GTTGTTGATGGAATTGAGGG+TGG | 0.596454 | 1.2:+55489263 | None:intergenic |
| TGAAATATCGTGGTAGCATG+TGG | 0.600425 | 1.2:-55488914 | MS.gene32076:intron |
| TCGATAACCGACACCATCAA+AGG | 0.601387 | 1.2:-55489230 | MS.gene32076:CDS |
| CAAAGCTAAAGTTGTAGCCA+CGG | 0.605118 | 1.2:+55486809 | None:intergenic |
| TCAGCTGTGATGCAAACTGA+TGG | 0.605667 | 1.2:-55485620 | MS.gene32076:intron |
| ATTGTAGCGTTGGTGTTGTG+AGG | 0.611297 | 1.2:-55488135 | MS.gene32076:CDS |
| CAGTGATGTAAATGGAAGGC+GGG | 0.613054 | 1.2:-55485477 | MS.gene32076:CDS |
| CGCCCATTCGTACCCACCAA+CGG | 0.616095 | 1.2:+55489127 | None:intergenic |
| GATGATGATGAATTTGAGGA+TGG | 0.626655 | 1.2:+55489302 | None:intergenic |
| CCTTATACGTTGAAATATCG+TGG | 0.627057 | 1.2:-55488924 | MS.gene32076:CDS |
| AAAGCTCAGTCAAAACAGAT+GGG | 0.629546 | 1.2:+55485573 | None:intergenic |
| TATAAAAGTTGAAGATATCG+AGG | 0.632506 | 1.2:-55487897 | MS.gene32076:CDS |
| ACACCATCAAAGGCTCACAT+AGG | 0.632820 | 1.2:-55489220 | MS.gene32076:CDS |
| GTCGGTTATCGATGTTGAGG+AGG | 0.637096 | 1.2:+55489241 | None:intergenic |
| GTTGTGAGGTCACACACAGA+GGG | 0.645126 | 1.2:-55488121 | MS.gene32076:CDS |
| GGTATGCCTTAGATAGACTT+AGG | 0.647862 | 1.2:-55486875 | MS.gene32076:CDS |
| CACATAGGTTCAAGATAACG+GGG | 0.658135 | 1.2:-55489205 | MS.gene32076:CDS |
| CCCTGATGGGAAAAGCGTGG+AGG | 0.667337 | 1.2:-55489093 | MS.gene32076:CDS |
| TTACCCTGATGGGAAAAGCG+TGG | 0.670712 | 1.2:-55489096 | MS.gene32076:CDS |
| AGATTCTTCGCGAAACAACG+AGG | 0.699126 | 1.2:-55489325 | MS.gene32076:CDS |
| ATGGCAGTGATGTAAATGGA+AGG | 0.702793 | 1.2:-55485481 | MS.gene32076:CDS |
| AGATGTTGCAATAAATACCG+TGG | 0.705274 | 1.2:-55486826 | MS.gene32076:CDS |
| GCAGTGATGTAAATGGAAGG+CGG | 0.707656 | 1.2:-55485478 | MS.gene32076:CDS |
| GGTGTCGGTTATCGATGTTG+AGG | 0.707765 | 1.2:+55489238 | None:intergenic |
| TGTTGTGAGGTCACACACAG+AGG | 0.714300 | 1.2:-55488122 | MS.gene32076:CDS |
| GCAAGGCCTGAAAATCTCAG+AGG | 0.724609 | 1.2:-55486735 | MS.gene32076:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATTAACTAATAATAAAT+TGG | + | chr1.2:55488424-55488443 | None:intergenic | 10.0% |
| !!! | TAATAATAAATTGGTTTAAT+GGG | + | chr1.2:55488415-55488434 | None:intergenic | 10.0% |
| !!! | TTATTGATTAATAACTATAT+TGG | - | chr1.2:55488549-55488568 | MS.gene32076:intron | 10.0% |
| !! | AATTATTTAAACCTTGAAAA+CGG | + | chr1.2:55486912-55486931 | None:intergenic | 15.0% |
| !! | ATGCTTAACAATTATAATAA+GGG | + | chr1.2:55487071-55487090 | None:intergenic | 15.0% |
| !! | TATGCTTAACAATTATAATA+AGG | + | chr1.2:55487072-55487091 | None:intergenic | 15.0% |
| !! | TCAAAATAGAGAAAAAAATA+TGG | + | chr1.2:55487768-55487787 | None:intergenic | 15.0% |
| !!! | AAAAAAAAACGAGTTTTTTT+GGG | + | chr1.2:55488459-55488478 | None:intergenic | 15.0% |
| !!! | ACCATTAGAAAAAATATTTT+GGG | + | chr1.2:55488618-55488637 | None:intergenic | 15.0% |
| !!! | CTAATAATAAATTGGTTTAA+TGG | + | chr1.2:55488416-55488435 | None:intergenic | 15.0% |
| !!! | TACCATTAGAAAAAATATTT+TGG | + | chr1.2:55488619-55488638 | None:intergenic | 15.0% |
| !!! | TATTTGTTAATTGGTATAAT+AGG | + | chr1.2:55488518-55488537 | None:intergenic | 15.0% |
| !!! | TATTTTTTTCTCTATTTTGA+AGG | - | chr1.2:55487768-55487787 | MS.gene32076:intron | 15.0% |
| !!! | TGTTGATAAAAAAAAAATAG+AGG | + | chr1.2:55487334-55487353 | None:intergenic | 15.0% |
| !! | AAAAATATGTGCAATATTAG+GGG | - | chr1.2:55488119-55488138 | MS.gene32076:CDS | 20.0% |
| !! | AGAAAAATATGTGCAATATT+AGG | - | chr1.2:55488117-55488136 | MS.gene32076:CDS | 20.0% |
| !! | AGAACACAACAATAAAAATA+TGG | - | chr1.2:55487291-55487310 | MS.gene32076:intron | 20.0% |
| !! | ATTATTTAAACCTTGAAAAC+GGG | + | chr1.2:55486911-55486930 | None:intergenic | 20.0% |
| !! | ATTGCTTCATGTTATATATT+GGG | - | chr1.2:55487792-55487811 | MS.gene32076:intron | 20.0% |
| !! | GAAAAATATGTGCAATATTA+GGG | - | chr1.2:55488118-55488137 | MS.gene32076:CDS | 20.0% |
| !! | TACATGTTTGCAAAAAATAT+TGG | - | chr1.2:55487157-55487176 | MS.gene32076:intron | 20.0% |
| !! | TCAATTTATACTATAACTTG+TGG | + | chr1.2:55487492-55487511 | None:intergenic | 20.0% |
| !! | TCTAATTCTTATTAAACCAT+TGG | - | chr1.2:55487596-55487615 | MS.gene32076:intron | 20.0% |
| !! | TCTTTATACCAATTAACATT+TGG | + | chr1.2:55487388-55487407 | None:intergenic | 20.0% |
| !! | TTATAAGAAAGATGAAAATC+TGG | - | chr1.2:55486141-55486160 | MS.gene32076:intron | 20.0% |
| !!! | AAAAAGGCGTTTTTTTTTTT+TGG | + | chr1.2:55488358-55488377 | None:intergenic | 20.0% |
| !!! | AAAAGGCGTTTTTTTTTTTT+GGG | + | chr1.2:55488357-55488376 | None:intergenic | 20.0% |
| !!! | AATTTATACTATAACTTGTG+GGG | + | chr1.2:55487490-55487509 | None:intergenic | 20.0% |
| !!! | ATTACTTTGAGTTATTTAAG+GGG | + | chr1.2:55486383-55486402 | None:intergenic | 20.0% |
| !!! | ATTGTTTTAAATTGTGTTTC+AGG | - | chr1.2:55486549-55486568 | MS.gene32076:intron | 20.0% |
| !!! | CAAAAAAAAACGAGTTTTTT+TGG | + | chr1.2:55488460-55488479 | None:intergenic | 20.0% |
| !!! | CAATTTATACTATAACTTGT+GGG | + | chr1.2:55487491-55487510 | None:intergenic | 20.0% |
| !!! | CATTACTTTGAGTTATTTAA+GGG | + | chr1.2:55486384-55486403 | None:intergenic | 20.0% |
| !!! | GTTCTTAAACTCTTTTAATT+AGG | - | chr1.2:55488989-55489008 | MS.gene32076:CDS | 20.0% |
| !!! | TCCCAAAATATTTTTTCTAA+TGG | - | chr1.2:55488614-55488633 | MS.gene32076:intron | 20.0% |
| !!! | TGCAATACTATAAATTTTGT+AGG | - | chr1.2:55488679-55488698 | MS.gene32076:intron | 20.0% |
| !!! | TTAAACTCTTTTAATTAGGA+TGG | - | chr1.2:55488993-55489012 | MS.gene32076:CDS | 20.0% |
| !!! | TTAGAAAAAATATTTTGGGA+AGG | + | chr1.2:55488614-55488633 | None:intergenic | 20.0% |
| !!! | TTGTTTTAAATTGTGTTTCA+GGG | - | chr1.2:55486550-55486569 | MS.gene32076:intron | 20.0% |
| ! | AAATCAACAAATGCATTCAA+TGG | + | chr1.2:55486446-55486465 | None:intergenic | 25.0% |
| ! | AATCAACAAATGCATTCAAT+GGG | + | chr1.2:55486445-55486464 | None:intergenic | 25.0% |
| ! | AATGGTAAGAAATTTATGTG+TGG | - | chr1.2:55488632-55488651 | MS.gene32076:intron | 25.0% |
| ! | ATACAAATTTACCAACGATT+TGG | + | chr1.2:55489047-55489066 | None:intergenic | 25.0% |
| ! | ATGTTAATTGGTATAAAGAC+TGG | - | chr1.2:55487389-55487408 | MS.gene32076:intron | 25.0% |
| ! | ATTGGAATTGAAAATGCTTT+AGG | + | chr1.2:55486686-55486705 | None:intergenic | 25.0% |
| ! | CATTGCTTCATGTTATATAT+TGG | - | chr1.2:55487791-55487810 | MS.gene32076:intron | 25.0% |
| ! | CCTTAAATAACTCAAAGTAA+TGG | - | chr1.2:55486382-55486401 | MS.gene32076:intron | 25.0% |
| ! | GAAGTTTAATAACATGCATA+TGG | - | chr1.2:55487715-55487734 | MS.gene32076:intron | 25.0% |
| ! | TAAAGGAACTAAAATCAGAA+AGG | + | chr1.2:55487536-55487555 | None:intergenic | 25.0% |
| ! | TACAAATTTACCAACGATTT+GGG | + | chr1.2:55489046-55489065 | None:intergenic | 25.0% |
| ! | TATAAAAGTTGAAGATATCG+AGG | - | chr1.2:55486883-55486902 | MS.gene32076:CDS | 25.0% |
| ! | TTATACCAATTAACATTTGG+AGG | + | chr1.2:55487385-55487404 | None:intergenic | 25.0% |
| ! | TTGGAATTGAAAATGCTTTA+GGG | + | chr1.2:55486685-55486704 | None:intergenic | 25.0% |
| !! | AATACTTCAGTTGATATCAT+AGG | + | chr1.2:55489122-55489141 | None:intergenic | 25.0% |
| !! | CCATTACTTTGAGTTATTTA+AGG | + | chr1.2:55486385-55486404 | None:intergenic | 25.0% |
| !!! | AAACGTTTGATTCGTTTTTT+GGG | - | chr1.2:55486317-55486336 | MS.gene32076:intron | 25.0% |
| !!! | ATTTTAGTTCCTTTATTGCT+TGG | - | chr1.2:55487541-55487560 | MS.gene32076:intron | 25.0% |
| !!! | TGTTTCTGAACAAATTTTGA+AGG | - | chr1.2:55487261-55487280 | MS.gene32076:intron | 25.0% |
| !!! | TGTTTTAAATTGTGTTTCAG+GGG | - | chr1.2:55486551-55486570 | MS.gene32076:intron | 25.0% |
| !!! | TTGAATGCATTTGTTGATTT+TGG | - | chr1.2:55486446-55486465 | MS.gene32076:intron | 25.0% |
| AAATCAAGCATAGTGACTTT+GGG | - | chr1.2:55488947-55488966 | MS.gene32076:CDS | 30.0% | |
| ACTTGTGTTTAATGTGTTTG+TGG | - | chr1.2:55487673-55487692 | MS.gene32076:intron | 30.0% | |
| AGGATAACAATATCGTGAAT+CGG | + | chr1.2:55488730-55488749 | None:intergenic | 30.0% | |
| ATAGTCTAACTTCAAAACCA+AGG | + | chr1.2:55486360-55486379 | None:intergenic | 30.0% | |
| ATATCAGGACAAAGACAAAA+AGG | + | chr1.2:55487011-55487030 | None:intergenic | 30.0% | |
| ATCACAGCTGAAAAAAAGAA+AGG | + | chr1.2:55489151-55489170 | None:intergenic | 30.0% | |
| ATTATTGTCTAGTGGTGTAT+TGG | + | chr1.2:55488583-55488602 | None:intergenic | 30.0% | |
| CACTAAGACAGTTATCTTTA+AGG | + | chr1.2:55486622-55486641 | None:intergenic | 30.0% | |
| CGAAGTTCAATATCTATATC+AGG | + | chr1.2:55487026-55487045 | None:intergenic | 30.0% | |
| CGTAAACTGAATAAAGTCAA+AGG | + | chr1.2:55487634-55487653 | None:intergenic | 30.0% | |
| TACTGGGATTAACTCAAAAT+GGG | - | chr1.2:55487840-55487859 | MS.gene32076:intron | 30.0% | |
| TGATTCTAATTCCTTATCGA+GGG | - | chr1.2:55485957-55485976 | MS.gene32076:intron | 30.0% | |
| TTACATACTTATGCTTCTGT+GGG | - | chr1.2:55486108-55486127 | MS.gene32076:intron | 30.0% | |
| TTACTGGGATTAACTCAAAA+TGG | - | chr1.2:55487839-55487858 | MS.gene32076:intron | 30.0% | |
| TTATGCCTCCAAATGTTAAT+TGG | - | chr1.2:55487377-55487396 | MS.gene32076:intron | 30.0% | |
| TTATTGTCTAGTGGTGTATT+GGG | + | chr1.2:55488582-55488601 | None:intergenic | 30.0% | |
| TTCTGAACATTGTTGGAAAA+GGG | - | chr1.2:55486207-55486226 | MS.gene32076:intron | 30.0% | |
| TTTCACGAATTATTGTCTAG+TGG | + | chr1.2:55488591-55488610 | None:intergenic | 30.0% | |
| ! | AAAAAGTGCAAATGAGTTCT+TGG | + | chr1.2:55487458-55487477 | None:intergenic | 30.0% |
| ! | AATTTTTGCGGCTCATAAAT+TGG | - | chr1.2:55486790-55486809 | MS.gene32076:CDS | 30.0% |
| ! | AGATGATGATGATGAATTTG+AGG | + | chr1.2:55485485-55485504 | None:intergenic | 30.0% |
| ! | AGTGAATGGTGAAATTTTTG+CGG | - | chr1.2:55486778-55486797 | MS.gene32076:CDS | 30.0% |
| ! | ATTTTGTCTACCTTGATTAG+GGG | - | chr1.2:55488774-55488793 | MS.gene32076:intron | 30.0% |
| ! | CGTATGCTTATGCTTTATTA+AGG | - | chr1.2:55488886-55488905 | MS.gene32076:intron | 30.0% |
| ! | GATTTTGTCTACCTTGATTA+GGG | - | chr1.2:55488773-55488792 | MS.gene32076:intron | 30.0% |
| ! | GCTTTTTGAATTAACGCTTT+TGG | - | chr1.2:55485771-55485790 | MS.gene32076:intron | 30.0% |
| ! | GGAATGATAGGAATTTTTAC+TGG | - | chr1.2:55486077-55486096 | MS.gene32076:intron | 30.0% |
| ! | TCTGTTTGAAATTCATTGCA+AGG | - | chr1.2:55488028-55488047 | MS.gene32076:CDS | 30.0% |
| !! | AGGTTCATAGTCATTTTGAT+AGG | - | chr1.2:55485818-55485837 | MS.gene32076:intron | 30.0% |
| !!! | AAAAACGAGTTTTTTTGGGA+AGG | + | chr1.2:55488455-55488474 | None:intergenic | 30.0% |
| !!! | AACGTTTGATTCGTTTTTTG+GGG | - | chr1.2:55486318-55486337 | MS.gene32076:intron | 30.0% |
| !!! | ACTGGTATTTTTTCAGATTG+AGG | - | chr1.2:55487407-55487426 | MS.gene32076:intron | 30.0% |
| !!! | ATGGAACTTTTTTGTGACAA+TGG | - | chr1.2:55486501-55486520 | MS.gene32076:intron | 30.0% |
| !!! | CAAACGTTTGATTCGTTTTT+TGG | - | chr1.2:55486316-55486335 | MS.gene32076:intron | 30.0% |
| !!! | CGATTTATTTTTACCCTGAT+GGG | - | chr1.2:55485674-55485693 | MS.gene32076:intron | 30.0% |
| !!! | GATGTGAATTTTGAAGTGAA+TGG | - | chr1.2:55486764-55486783 | MS.gene32076:CDS | 30.0% |
| !!! | TGCATTTGTTGATTTTGGTT+TGG | - | chr1.2:55486451-55486470 | MS.gene32076:intron | 30.0% |
| AAAAGCTCAGTCAAAACAGA+TGG | + | chr1.2:55489211-55489230 | None:intergenic | 35.0% | |
| AAACAGGAACCAAGCAATAA+AGG | + | chr1.2:55487553-55487572 | None:intergenic | 35.0% | |
| AAAGCTCAGTCAAAACAGAT+GGG | + | chr1.2:55489210-55489229 | None:intergenic | 35.0% | |
| AAGGCAGTTTGAAAAACCAA+TGG | + | chr1.2:55487615-55487634 | None:intergenic | 35.0% | |
| AGATGTTGCAATAAATACCG+TGG | - | chr1.2:55487954-55487973 | MS.gene32076:CDS | 35.0% | |
| ATAACAATATCGTGAATCGG+GGG | + | chr1.2:55488727-55488746 | None:intergenic | 35.0% | |
| ATAGCAACATACAGACTTTC+AGG | + | chr1.2:55488818-55488837 | None:intergenic | 35.0% | |
| ATATACTCGCAAATTGCAAC+TGG | + | chr1.2:55487229-55487248 | None:intergenic | 35.0% | |
| ATTAGGATGGCTATATACGA+TGG | - | chr1.2:55489006-55489025 | MS.gene32076:CDS | 35.0% | |
| CAAATCAAGCATAGTGACTT+TGG | - | chr1.2:55488946-55488965 | MS.gene32076:CDS | 35.0% | |
| CATGTGACAGCAACAAAAAA+AGG | + | chr1.2:55488374-55488393 | None:intergenic | 35.0% | |
| CATTCCAAGTTACCAACATT+GGG | + | chr1.2:55486063-55486082 | None:intergenic | 35.0% | |
| CCAATAGTAGAAGGTGATAT+TGG | + | chr1.2:55486704-55486723 | None:intergenic | 35.0% | |
| CCAATATCACCTTCTACTAT+TGG | - | chr1.2:55486701-55486720 | MS.gene32076:intron | 35.0% | |
| CCACGATATTTCAACGTATA+AGG | + | chr1.2:55485859-55485878 | None:intergenic | 35.0% | |
| CCTTATACGTTGAAATATCG+TGG | - | chr1.2:55485856-55485875 | MS.gene32076:intron | 35.0% | |
| CTCACATAGGTTCAAGATAA+CGG | - | chr1.2:55485573-55485592 | MS.gene32076:CDS | 35.0% | |
| CTGATTCTAATTCCTTATCG+AGG | - | chr1.2:55485956-55485975 | MS.gene32076:intron | 35.0% | |
| CTTAGTGTTAATTGTAGCGT+TGG | - | chr1.2:55486635-55486654 | MS.gene32076:intron | 35.0% | |
| GATAACAATATCGTGAATCG+GGG | + | chr1.2:55488728-55488747 | None:intergenic | 35.0% | |
| GGATAACAATATCGTGAATC+GGG | + | chr1.2:55488729-55488748 | None:intergenic | 35.0% | |
| GGTCTGGATGAAGAATAAAT+AGG | + | chr1.2:55489101-55489120 | None:intergenic | 35.0% | |
| GTTACATACTTATGCTTCTG+TGG | - | chr1.2:55486107-55486126 | MS.gene32076:intron | 35.0% | |
| TATTCACTCTCAAAAGGGAT+TGG | - | chr1.2:55485598-55485617 | MS.gene32076:CDS | 35.0% | |
| TCACATAGGTTCAAGATAAC+GGG | - | chr1.2:55485574-55485593 | MS.gene32076:CDS | 35.0% | |
| TCATTCCAAGTTACCAACAT+TGG | + | chr1.2:55486064-55486083 | None:intergenic | 35.0% | |
| TCTCAAAAGGGATTGGAATT+GGG | - | chr1.2:55485605-55485624 | MS.gene32076:CDS | 35.0% | |
| TCTGAACATTGTTGGAAAAG+GGG | - | chr1.2:55486208-55486227 | MS.gene32076:intron | 35.0% | |
| TGTGTGTTCTGATCTTTCAT+AGG | + | chr1.2:55486860-55486879 | None:intergenic | 35.0% | |
| TGTTTGTGAAGGTTTAAGCT+TGG | - | chr1.2:55485983-55486002 | MS.gene32076:intron | 35.0% | |
| TTGCGAGTATATTTGACTGT+TGG | - | chr1.2:55487237-55487256 | MS.gene32076:intron | 35.0% | |
| ! | AACATTTGGAGGCATAAATG+AGG | + | chr1.2:55487374-55487393 | None:intergenic | 35.0% |
| ! | ACATTTGGAGGCATAAATGA+GGG | + | chr1.2:55487373-55487392 | None:intergenic | 35.0% |
| ! | CGATTTTGTCTACCTTGATT+AGG | - | chr1.2:55488772-55488791 | MS.gene32076:intron | 35.0% |
| ! | GATGATGATGAATTTGAGGA+TGG | + | chr1.2:55485481-55485500 | None:intergenic | 35.0% |
| ! | GTTCTGAACATTGTTGGAAA+AGG | - | chr1.2:55486206-55486225 | MS.gene32076:intron | 35.0% |
| ! | TGAAGTGTTCTGAACATTGT+TGG | - | chr1.2:55486200-55486219 | MS.gene32076:intron | 35.0% |
| ! | TTCAGTTGATATCATAGGTC+TGG | + | chr1.2:55489117-55489136 | None:intergenic | 35.0% |
| !! | AAAAGCTGAGCTCTAAAAAC+AGG | + | chr1.2:55486833-55486852 | None:intergenic | 35.0% |
| !! | GAAGAGGTACAGTTTTCTAA+AGG | - | chr1.2:55486523-55486542 | MS.gene32076:intron | 35.0% |
| !! | TAGTCATTTTGATAGGACGT+TGG | - | chr1.2:55485825-55485844 | MS.gene32076:intron | 35.0% |
| !! | TGTTGGTAACTTGGAATGAT+AGG | - | chr1.2:55486065-55486084 | MS.gene32076:intron | 35.0% |
| !!! | ACGTTTGATTCGTTTTTTGG+GGG | - | chr1.2:55486319-55486338 | MS.gene32076:intron | 35.0% |
| !!! | ATCTGTTTTGACTGAGCTTT+TGG | - | chr1.2:55489210-55489229 | MS.gene32076:CDS | 35.0% |
| !!! | CTCGTTTTTTTTTGTTGACC+TGG | - | chr1.2:55488466-55488485 | MS.gene32076:intron | 35.0% |
| !!! | CTTTTTTGTGACAATGGAAG+AGG | - | chr1.2:55486507-55486526 | MS.gene32076:intron | 35.0% |
| !!! | GCGATTTATTTTTACCCTGA+TGG | - | chr1.2:55485673-55485692 | MS.gene32076:intron | 35.0% |
| !!! | GTTTTTAGAGCTCAGCTTTT+TGG | - | chr1.2:55486833-55486852 | MS.gene32076:CDS | 35.0% |
| !!! | TTTCTGAAGTTTTTCGAAGC+CGG | + | chr1.2:55488334-55488353 | None:intergenic | 35.0% |
| AAAATGGGCAACTACCTTGA+TGG | - | chr1.2:55487855-55487874 | MS.gene32076:intron | 40.0% | |
| AACTGGTGACCAATAGTAGA+AGG | + | chr1.2:55486713-55486732 | None:intergenic | 40.0% | |
| AGCATACGATAGTCAACAAC+AGG | + | chr1.2:55488874-55488893 | None:intergenic | 40.0% | |
| AGGAACGAAGCAATACTTGA+TGG | - | chr1.2:55489280-55489299 | MS.gene32076:CDS | 40.0% | |
| AGGGGAATTGGGACATTAAA+AGG | - | chr1.2:55488792-55488811 | MS.gene32076:intron | 40.0% | |
| ATCGAGATCCTAGACAAGAT+CGG | + | chr1.2:55488756-55488775 | None:intergenic | 40.0% | |
| ATGGCAGTGATGTAAATGGA+AGG | - | chr1.2:55489299-55489318 | MS.gene32076:CDS | 40.0% | |
| CAAAGCTAAAGTTGTAGCCA+CGG | + | chr1.2:55487974-55487993 | None:intergenic | 40.0% | |
| CACATAGGTTCAAGATAACG+GGG | - | chr1.2:55485575-55485594 | MS.gene32076:CDS | 40.0% | |
| CATCAGCCTAAGTCTATCTA+AGG | + | chr1.2:55487914-55487933 | None:intergenic | 40.0% | |
| CTACCTTGATTAGGGGAATT+GGG | - | chr1.2:55488781-55488800 | MS.gene32076:intron | 40.0% | |
| CTACTATTGGTCACCAGTTT+GGG | - | chr1.2:55486714-55486733 | MS.gene32076:intron | 40.0% | |
| CTCTCAAAAGGGATTGGAAT+TGG | - | chr1.2:55485604-55485623 | MS.gene32076:CDS | 40.0% | |
| CTGAACATTGTTGGAAAAGG+GGG | - | chr1.2:55486209-55486228 | MS.gene32076:intron | 40.0% | |
| GCTAGAACAACTCAACAAAC+AGG | + | chr1.2:55487569-55487588 | None:intergenic | 40.0% | |
| GGCTAGATTTACTGAGCATT+CGG | - | chr1.2:55489240-55489259 | MS.gene32076:CDS | 40.0% | |
| GGTATGCCTTAGATAGACTT+AGG | - | chr1.2:55487905-55487924 | MS.gene32076:CDS | 40.0% | |
| GTTCACTGAGATGTGAGATT+TGG | - | chr1.2:55487432-55487451 | MS.gene32076:intron | 40.0% | |
| TACCATCTGAGTGCTTGATT+GGG | - | chr1.2:55488199-55488218 | MS.gene32076:CDS | 40.0% | |
| TATGTGCAATATTAGGGGCA+TGG | - | chr1.2:55488124-55488143 | MS.gene32076:CDS | 40.0% | |
| TCTACCTTGATTAGGGGAAT+TGG | - | chr1.2:55488780-55488799 | MS.gene32076:intron | 40.0% | |
| TCTACTATTGGTCACCAGTT+TGG | - | chr1.2:55486713-55486732 | MS.gene32076:intron | 40.0% | |
| TGAAATATCGTGGTAGCATG+TGG | - | chr1.2:55485866-55485885 | MS.gene32076:intron | 40.0% | |
| TGAACATTGTTGGAAAAGGG+GGG | - | chr1.2:55486210-55486229 | MS.gene32076:intron | 40.0% | |
| TGCTTGATTGGGTATGGAAT+CGG | - | chr1.2:55488210-55488229 | MS.gene32076:CDS | 40.0% | |
| TGTGAAGGTTTAAGCTTGGT+GGG | - | chr1.2:55485987-55486006 | MS.gene32076:intron | 40.0% | |
| TTCCATGAACTCAATTCAGC+AGG | + | chr1.2:55486487-55486506 | None:intergenic | 40.0% | |
| TTCCTGCTGAATTGAGTTCA+TGG | - | chr1.2:55486482-55486501 | MS.gene32076:intron | 40.0% | |
| TTCTTGAAATCCCGGGTTTA+CGG | - | chr1.2:55488294-55488313 | MS.gene32076:intron | 40.0% | |
| TTGGGTATGGAATCGGAAAT+TGG | - | chr1.2:55488217-55488236 | MS.gene32076:intron | 40.0% | |
| TTGTGAAGGTTTAAGCTTGG+TGG | - | chr1.2:55485986-55486005 | MS.gene32076:intron | 40.0% | |
| TTTCCAAAAGCTTCCCAAAC+TGG | + | chr1.2:55486730-55486749 | None:intergenic | 40.0% | |
| ! | CTTGATGGCAGTGATGTAAA+TGG | - | chr1.2:55489295-55489314 | MS.gene32076:CDS | 40.0% |
| ! | GAGGTTGTTGATGGAATTGA+GGG | + | chr1.2:55485523-55485542 | None:intergenic | 40.0% |
| ! | GTTTGTTGAGTTGTTCTAGC+TGG | - | chr1.2:55487569-55487588 | MS.gene32076:intron | 40.0% |
| ! | TAACGCTTTTGGATCAGAGT+GGG | - | chr1.2:55485782-55485801 | MS.gene32076:intron | 40.0% |
| ! | TGATGGTTTCGAGTACTTGA+AGG | - | chr1.2:55489177-55489196 | MS.gene32076:CDS | 40.0% |
| ! | TGCAGTTTTACCCAAATCGT+TGG | - | chr1.2:55489033-55489052 | MS.gene32076:CDS | 40.0% |
| ! | TTAACGCTTTTGGATCAGAG+TGG | - | chr1.2:55485781-55485800 | MS.gene32076:intron | 40.0% |
| !! | TTCTTGAGTTGACCCAATGT+TGG | - | chr1.2:55486048-55486067 | MS.gene32076:intron | 40.0% |
| !! | TTGACCCAATGTTGGTAACT+TGG | - | chr1.2:55486056-55486075 | MS.gene32076:intron | 40.0% |
| !! | TTTGGGAAGCTTTTGGAAAG+TGG | - | chr1.2:55486731-55486750 | MS.gene32076:intron | 40.0% |
| !!! | AACACACCTCTGAGATTTTC+AGG | + | chr1.2:55488054-55488073 | None:intergenic | 40.0% |
| !!! | TTCTGAAGTTTTTCGAAGCC+GGG | + | chr1.2:55488333-55488352 | None:intergenic | 40.0% |
| !!! | TTGATTCGTTTTTTGGGGGT+GGG | - | chr1.2:55486323-55486342 | MS.gene32076:intron | 40.0% |
| !!! | TTTGATTCGTTTTTTGGGGG+TGG | - | chr1.2:55486322-55486341 | MS.gene32076:intron | 40.0% |
| ACACCATCAAAGGCTCACAT+AGG | - | chr1.2:55485560-55485579 | MS.gene32076:CDS | 45.0% | |
| AGATTCTTCGCGAAACAACG+AGG | - | chr1.2:55485455-55485474 | MS.gene32076:CDS | 45.0% | |
| ATCCGTTTCATTCATGTGCC+AGG | + | chr1.2:55488487-55488506 | None:intergenic | 45.0% | |
| ATCGAGGGTAGTGTTTGTGA+AGG | - | chr1.2:55485972-55485991 | MS.gene32076:intron | 45.0% | |
| CACAAACACTACCCTCGATA+AGG | + | chr1.2:55485971-55485990 | None:intergenic | 45.0% | |
| CAGTGATGTAAATGGAAGGC+GGG | - | chr1.2:55489303-55489322 | MS.gene32076:CDS | 45.0% | |
| CTGACATGCAAGAGCTTACT+GGG | - | chr1.2:55487824-55487843 | MS.gene32076:intron | 45.0% | |
| CTGCTTTCAGCTGGAAACAA+TGG | + | chr1.2:55488008-55488027 | None:intergenic | 45.0% | |
| GAACCTATGTGAGCCTTTGA+TGG | + | chr1.2:55485566-55485585 | None:intergenic | 45.0% | |
| GACCTGGCACATGAATGAAA+CGG | - | chr1.2:55488482-55488501 | MS.gene32076:intron | 45.0% | |
| GAGTGAAGGGACTGATGTTA+GGG | - | chr1.2:55485747-55485766 | MS.gene32076:intron | 45.0% | |
| GATGTTGAGGAGGTTGTTGA+TGG | + | chr1.2:55485532-55485551 | None:intergenic | 45.0% | |
| GCAGTGATGTAAATGGAAGG+CGG | - | chr1.2:55489302-55489321 | MS.gene32076:CDS | 45.0% | |
| GTACCATCTGAGTGCTTGAT+TGG | - | chr1.2:55488198-55488217 | MS.gene32076:CDS | 45.0% | |
| TACCCAATCAAGCACTCAGA+TGG | + | chr1.2:55488204-55488223 | None:intergenic | 45.0% | |
| TCAAACAGACTGCTTTCAGC+TGG | + | chr1.2:55488017-55488036 | None:intergenic | 45.0% | |
| TCAGCTGTGATGCAAACTGA+TGG | - | chr1.2:55489160-55489179 | MS.gene32076:CDS | 45.0% | |
| TCGAGATCCTAGACAAGATC+GGG | + | chr1.2:55488755-55488774 | None:intergenic | 45.0% | |
| TCGATAACCGACACCATCAA+AGG | - | chr1.2:55485550-55485569 | MS.gene32076:CDS | 45.0% | |
| TCGCAAATTGCAACTGGCAA+GGG | + | chr1.2:55487223-55487242 | None:intergenic | 45.0% | |
| TCTGAGTGCTTGATTGGGTA+TGG | - | chr1.2:55488204-55488223 | MS.gene32076:CDS | 45.0% | |
| TCTTGAAATCCCGGGTTTAC+GGG | - | chr1.2:55488295-55488314 | MS.gene32076:intron | 45.0% | |
| TGTCCCAATTCCCCTAATCA+AGG | + | chr1.2:55488787-55488806 | None:intergenic | 45.0% | |
| TGTCTAGTGGTGTATTGGGA+AGG | + | chr1.2:55488578-55488597 | None:intergenic | 45.0% | |
| TGTGCGTCTTCTTGAAATCC+CGG | - | chr1.2:55488286-55488305 | MS.gene32076:intron | 45.0% | |
| TTTGATAGGACGTTGGAGAG+TGG | - | chr1.2:55485832-55485851 | MS.gene32076:intron | 45.0% | |
| ! | ACGGGGTATTCACTCTCAAA+AGG | - | chr1.2:55485592-55485611 | MS.gene32076:CDS | 45.0% |
| ! | CGGGGTATTCACTCTCAAAA+GGG | - | chr1.2:55485593-55485612 | MS.gene32076:CDS | 45.0% |
| ! | CGTGGCTACAACTTTAGCTT+TGG | - | chr1.2:55487972-55487991 | MS.gene32076:CDS | 45.0% |
| ! | CTGAGATTTTCACCGTTGGT+GGG | - | chr1.2:55485641-55485660 | MS.gene32076:intron | 45.0% |
| ! | GGAGGTTGTTGATGGAATTG+AGG | + | chr1.2:55485524-55485543 | None:intergenic | 45.0% |
| ! | GTTGTTGATGGAATTGAGGG+TGG | + | chr1.2:55485520-55485539 | None:intergenic | 45.0% |
| ! | TCACCAGTTTGGGAAGCTTT+TGG | - | chr1.2:55486724-55486743 | MS.gene32076:intron | 45.0% |
| !! | ATGTGAGCCTTTGATGGTGT+CGG | + | chr1.2:55485560-55485579 | None:intergenic | 45.0% |
| !! | ATTGTAGCGTTGGTGTTGTG+AGG | - | chr1.2:55486645-55486664 | MS.gene32076:intron | 45.0% |
| !! | GCATCTGAGATTTTCACCGT+TGG | - | chr1.2:55485637-55485656 | MS.gene32076:intron | 45.0% |
| !! | TCTGAGATTTTCACCGTTGG+TGG | - | chr1.2:55485640-55485659 | MS.gene32076:intron | 45.0% |
| !!! | GACTGAGCTTTTGGAGTATG+TGG | - | chr1.2:55489219-55489238 | MS.gene32076:CDS | 45.0% |
| !!! | TGATTCGTTTTTTGGGGGTG+GGG | - | chr1.2:55486324-55486343 | MS.gene32076:intron | 45.0% |
| !! | ATAAATAAAAAATAATAAAG+AGG | + | chr1.2:55486949-55486968 | None:intergenic | 5.0% |
| !!! | ATTAATAAATATTTGTTAAT+TGG | + | chr1.2:55488527-55488546 | None:intergenic | 5.0% |
| AACTAATGCCAGAAGCAGGC+AGG | + | chr1.2:55487121-55487140 | None:intergenic | 50.0% | |
| ACCCAACTAATGCCAGAAGC+AGG | + | chr1.2:55487125-55487144 | None:intergenic | 50.0% | |
| ACCGTTTCCATGCGTTATCG+CGG | + | chr1.2:55488261-55488280 | None:intergenic | 50.0% | |
| ATCTGCTAGCAGCAGCTGAT+CGG | - | chr1.2:55487884-55487903 | MS.gene32076:CDS | 50.0% | |
| ATGCGTTATCGCGGAGATTC+CGG | + | chr1.2:55488252-55488271 | None:intergenic | 50.0% | |
| CAAATTGCAACTGGCAAGGG+TGG | + | chr1.2:55487220-55487239 | None:intergenic | 50.0% | |
| CCAGTAAGCTCTTGCATGTC+AGG | + | chr1.2:55487826-55487845 | None:intergenic | 50.0% | |
| CCTGACATGCAAGAGCTTAC+TGG | - | chr1.2:55487823-55487842 | MS.gene32076:intron | 50.0% | |
| CGAGATCCTAGACAAGATCG+GGG | + | chr1.2:55488754-55488773 | None:intergenic | 50.0% | |
| CGAGTGAAGGGACTGATGTT+AGG | - | chr1.2:55485746-55485765 | MS.gene32076:intron | 50.0% | |
| CTCGCAAATTGCAACTGGCA+AGG | + | chr1.2:55487224-55487243 | None:intergenic | 50.0% | |
| CTTCGTTCCTATGCTTGCAC+AGG | + | chr1.2:55489270-55489289 | None:intergenic | 50.0% | |
| GAATCGGAAATTGGTGAGCG+CGG | - | chr1.2:55488226-55488245 | MS.gene32076:intron | 50.0% | |
| GATGGAATTGAGGGTGGTGA+TGG | + | chr1.2:55485514-55485533 | None:intergenic | 50.0% | |
| GCAAGGCCTGAAAATCTCAG+AGG | - | chr1.2:55488045-55488064 | MS.gene32076:CDS | 50.0% | |
| GCCTGCTTCTGGCATTAGTT+GGG | - | chr1.2:55487121-55487140 | MS.gene32076:intron | 50.0% | |
| GTCGGTTATCGATGTTGAGG+AGG | + | chr1.2:55485542-55485561 | None:intergenic | 50.0% | |
| GTGCGTCTTCTTGAAATCCC+GGG | - | chr1.2:55488287-55488306 | MS.gene32076:intron | 50.0% | |
| GTTGTGAGGTCACACACAGA+GGG | - | chr1.2:55486659-55486678 | MS.gene32076:intron | 50.0% | |
| TAGCAGATGCTGAGCCATCA+AGG | + | chr1.2:55487872-55487891 | None:intergenic | 50.0% | |
| TCCGCGATAACGCATGGAAA+CGG | - | chr1.2:55488257-55488276 | MS.gene32076:intron | 50.0% | |
| TGAATCGGGGGATCGTAACA+CGG | + | chr1.2:55488715-55488734 | None:intergenic | 50.0% | |
| TGCCTGCTTCTGGCATTAGT+TGG | - | chr1.2:55487120-55487139 | MS.gene32076:intron | 50.0% | |
| TGGATCAGAGTGGGAAAGAG+AGG | - | chr1.2:55485791-55485810 | MS.gene32076:intron | 50.0% | |
| TGTTGGAAAAGGGGGGTGAA+AGG | - | chr1.2:55486217-55486236 | MS.gene32076:intron | 50.0% | |
| TGTTGTGAGGTCACACACAG+AGG | - | chr1.2:55486658-55486677 | MS.gene32076:intron | 50.0% | |
| TTACCCTGATGGGAAAAGCG+TGG | - | chr1.2:55485684-55485703 | MS.gene32076:intron | 50.0% | |
| ! | GAGTGGGAAAGAGAGGCATA+AGG | - | chr1.2:55485798-55485817 | MS.gene32076:intron | 50.0% |
| ! | TATCGAGGCTCCCGTTTTCA+AGG | - | chr1.2:55486898-55486917 | MS.gene32076:CDS | 50.0% |
| !! | GGTGTCGGTTATCGATGTTG+AGG | + | chr1.2:55485545-55485564 | None:intergenic | 50.0% |
| ATCCTAGACAAGATCGGGGC+AGG | + | chr1.2:55488750-55488769 | None:intergenic | 55.0% | |
| ATCCTGCCCCGATCTTGTCT+AGG | - | chr1.2:55488745-55488764 | MS.gene32076:intron | 55.0% | |
| ATGCCAGAAGCAGGCAGGAT+TGG | + | chr1.2:55487116-55487135 | None:intergenic | 55.0% | |
| CGGACTTCCTGTGCAAGCAT+AGG | - | chr1.2:55489260-55489279 | MS.gene32076:CDS | 55.0% | |
| GAAATCCCGGGTTTACGGGT+CGG | - | chr1.2:55488299-55488318 | MS.gene32076:intron | 55.0% | |
| GCGATAACGCATGGAAACGG+TGG | - | chr1.2:55488260-55488279 | MS.gene32076:intron | 55.0% | |
| GGAATCTCCGCGATAACGCA+TGG | - | chr1.2:55488251-55488270 | MS.gene32076:intron | 55.0% | |
| GGCAGGATTGGGCACTAAGT+CGG | + | chr1.2:55487104-55487123 | None:intergenic | 55.0% | |
| TCATCGCGCTTGCGAGTGAA+GGG | - | chr1.2:55485734-55485753 | MS.gene32076:intron | 55.0% | |
| TGCCAGAAGCAGGCAGGATT+GGG | + | chr1.2:55487115-55487134 | None:intergenic | 55.0% | |
| TTCATCGCGCTTGCGAGTGA+AGG | - | chr1.2:55485733-55485752 | MS.gene32076:intron | 55.0% | |
| ! | CACCGTTGGTGGGTACGAAT+GGG | - | chr1.2:55485651-55485670 | MS.gene32076:intron | 55.0% |
| ! | CCTCCACGCTTTTCCCATCA+GGG | + | chr1.2:55485690-55485709 | None:intergenic | 55.0% |
| ! | TCACCGTTGGTGGGTACGAA+TGG | - | chr1.2:55485650-55485669 | MS.gene32076:intron | 55.0% |
| ! | TCCTCCACGCTTTTCCCATC+AGG | + | chr1.2:55485691-55485710 | None:intergenic | 55.0% |
| !! | AGTTTTTCGAAGCCGGGTCG+CGG | + | chr1.2:55488327-55488346 | None:intergenic | 55.0% |
| !!! | TCGTTTTTTGGGGGTGGGGT+GGG | - | chr1.2:55486328-55486347 | MS.gene32076:intron | 55.0% |
| !!! | TTCGTTTTTTGGGGGTGGGG+TGG | - | chr1.2:55486327-55486346 | MS.gene32076:intron | 55.0% |
| CGCCCATTCGTACCCACCAA+CGG | + | chr1.2:55485656-55485675 | None:intergenic | 60.0% | |
| CGGGGGATCGTAACACGGAT+CGG | + | chr1.2:55488710-55488729 | None:intergenic | 60.0% | |
| TGCCCAATCCTGCCTGCTTC+TGG | - | chr1.2:55487110-55487129 | MS.gene32076:intron | 60.0% | |
| ! | CCCTGATGGGAAAAGCGTGG+AGG | - | chr1.2:55485687-55485706 | MS.gene32076:intron | 60.0% |
| CGGAAATTGGTGAGCGCGGC+CGG | - | chr1.2:55488230-55488249 | MS.gene32076:intron | 65.0% | |
| CGGATCCGACCCGTAAACCC+GGG | + | chr1.2:55488307-55488326 | None:intergenic | 65.0% | |
| GCGGATCCGACCCGTAAACC+CGG | + | chr1.2:55488308-55488327 | None:intergenic | 65.0% | |
| TTTGGGGGTGGGGTGGGAGA+GGG | - | chr1.2:55486334-55486353 | MS.gene32076:intron | 65.0% | |
| !! | TTTTGGGGGTGGGGTGGGAG+AGG | - | chr1.2:55486333-55486352 | MS.gene32076:intron | 65.0% |
| TACGGGTCGGATCCGCGACC+CGG | - | chr1.2:55488312-55488331 | MS.gene32076:intron | 70.0% | |
| GGTGGGGTGGGAGAGGGCCT+TGG | - | chr1.2:55486340-55486359 | MS.gene32076:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 55485448 | 55489354 | 55485448 | ID=MS.gene32076 |
| chr1.2 | mRNA | 55485448 | 55489354 | 55485448 | ID=MS.gene32076.t1;Parent=MS.gene32076 |
| chr1.2 | exon | 55488915 | 55489354 | 55488915 | ID=MS.gene32076.t1.exon1;Parent=MS.gene32076.t1 |
| chr1.2 | CDS | 55488915 | 55489354 | 55488915 | ID=cds.MS.gene32076.t1;Parent=MS.gene32076.t1 |
| chr1.2 | exon | 55487883 | 55488231 | 55487883 | ID=MS.gene32076.t1.exon2;Parent=MS.gene32076.t1 |
| chr1.2 | CDS | 55487883 | 55488231 | 55487883 | ID=cds.MS.gene32076.t1;Parent=MS.gene32076.t1 |
| chr1.2 | exon | 55486736 | 55487012 | 55486736 | ID=MS.gene32076.t1.exon3;Parent=MS.gene32076.t1 |
| chr1.2 | CDS | 55486736 | 55487012 | 55486736 | ID=cds.MS.gene32076.t1;Parent=MS.gene32076.t1 |
| chr1.2 | exon | 55485448 | 55485638 | 55485448 | ID=MS.gene32076.t1.exon4;Parent=MS.gene32076.t1 |
| chr1.2 | CDS | 55485448 | 55485638 | 55485448 | ID=cds.MS.gene32076.t1;Parent=MS.gene32076.t1 |
| Gene Sequence |
| Protein sequence |
