AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32168

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32168.t1 MTR_1g074370 96.714 213 4 1 1 210 1 213 8.74e-150 414
MS.gene32168.t1 MTR_1g043350 62.136 206 66 3 8 202 6 210 9.58e-68 207
MS.gene32168.t1 MTR_1g070015 48.438 192 78 4 15 203 42 215 6.26e-53 169
MS.gene32168.t1 MTR_1g070000 49.239 197 72 6 15 204 42 217 2.91e-52 168
MS.gene32168.t1 MTR_1g069985 55.128 156 64 3 52 203 54 207 3.96e-51 164
MS.gene32168.t1 MTR_4g054740 54.037 161 58 5 55 199 75 235 2.03e-50 164
MS.gene32168.t1 MTR_1g070020 59.574 141 45 4 66 199 63 198 1.27e-48 158
MS.gene32168.t1 MTR_4g054860 57.042 142 45 4 74 199 132 273 1.28e-47 157
MS.gene32168.t1 MTR_1g069940 59.732 149 49 3 70 207 92 240 1.59e-47 156
MS.gene32168.t1 MTR_1g069945 62.143 140 43 2 70 199 98 237 2.65e-47 156
MS.gene32168.t1 MTR_4g054360 58.156 141 45 4 73 199 124 264 1.01e-46 155
MS.gene32168.t1 MTR_7g096830 54.438 169 61 4 47 199 68 236 1.20e-46 154
MS.gene32168.t1 MTR_1g070035 44.615 195 86 5 28 203 21 212 5.29e-44 147
MS.gene32168.t1 MTR_7g096780 60.714 140 50 2 68 202 80 219 1.52e-43 146
MS.gene32168.t1 MTR_1g070045 55.319 141 54 5 29 167 25 158 2.30e-42 140
MS.gene32168.t1 MTR_4g088005 58.654 104 42 1 28 130 11 114 4.40e-42 138
MS.gene32168.t1 MTR_2g015040 57.895 114 41 2 28 134 11 124 5.45e-42 139
MS.gene32168.t1 MTR_2g015050 45.882 170 69 3 50 201 111 275 1.83e-36 129
MS.gene32168.t1 MTR_4g100380 46.528 144 39 3 28 133 62 205 1.18e-33 121
MS.gene32168.t1 MTR_8g006840 46.212 132 45 3 28 133 54 185 4.87e-31 112
MS.gene32168.t1 MTR_1g070070 69.620 79 21 1 57 132 2 80 5.69e-30 108
MS.gene32168.t1 MTR_7g096750 75.362 69 17 0 64 132 11 79 1.25e-29 107
MS.gene32168.t1 MTR_1g048610 59.140 93 34 2 55 143 69 161 1.56e-29 109
MS.gene32168.t1 MTR_7g081795 50.000 124 44 4 16 130 3 117 3.34e-29 108
MS.gene32168.t1 MTR_7g096700 67.901 81 19 2 52 132 6 79 5.90e-29 105
MS.gene32168.t1 MTR_8g006815 68.493 73 23 0 61 133 84 156 1.01e-28 107
MS.gene32168.t1 MTR_1g090290 57.895 95 38 1 51 143 89 183 5.38e-28 105
MS.gene32168.t1 MTR_1g074230 78.333 60 13 0 73 132 19 78 8.98e-28 102
MS.gene32168.t1 MTR_4g100420 53.763 93 43 0 59 151 143 235 1.05e-27 107
MS.gene32168.t1 MTR_1g074310 62.500 72 27 0 61 132 9 80 1.33e-27 102
MS.gene32168.t1 MTR_7g081815 63.855 83 25 2 48 130 41 118 1.53e-27 103
MS.gene32168.t1 MTR_4g100450 64.000 75 27 0 59 133 140 214 2.42e-27 105
MS.gene32168.t1 MTR_7g081805 60.714 84 29 1 47 130 39 118 3.96e-27 103
MS.gene32168.t1 MTR_8g006825 52.632 95 40 2 43 133 63 156 3.19e-26 100
MS.gene32168.t1 MTR_7g021010 61.111 72 27 1 64 135 42 112 5.35e-26 99.4
MS.gene32168.t1 MTR_7g020980 52.174 92 40 2 47 135 22 112 6.49e-26 99.0
MS.gene32168.t1 MTR_7g021010 61.972 71 26 1 65 135 4 73 1.26e-25 97.1
MS.gene32168.t1 MTR_1g074250 64.000 75 19 2 64 130 3 77 7.07e-25 95.1
MS.gene32168.t1 MTR_2g438180 65.625 64 22 0 69 132 10 73 4.80e-23 90.1
MS.gene32168.t1 MTR_1g069960 76.667 60 14 0 73 132 27 86 8.21e-23 90.1
MS.gene32168.t1 MTR_7g096810 61.842 76 29 0 64 139 4 79 1.07e-22 89.4
MS.gene32168.t1 MTR_2g078680 52.809 89 39 2 48 134 6 93 1.37e-22 91.3
MS.gene32168.t1 MTR_1g040430 59.551 89 36 0 44 132 82 170 4.35e-22 89.7
MS.gene32168.t1 MTR_4g086160 42.520 127 53 5 73 198 96 203 1.67e-21 89.0
MS.gene32168.t1 MTR_2g014300 54.762 84 36 2 61 143 3 85 1.67e-21 87.4
MS.gene32168.t1 MTR_3g053690 64.062 64 22 1 69 132 23 85 3.36e-21 87.8
MS.gene32168.t1 MTR_5g085070 65.079 63 21 1 69 131 47 108 3.94e-21 89.0
MS.gene32168.t1 MTR_4g086165 64.286 70 22 2 69 138 78 144 4.28e-21 87.4
MS.gene32168.t1 MTR_8g092460 58.571 70 28 1 64 133 136 204 4.37e-21 89.4
MS.gene32168.t1 MTR_5g009620 66.102 59 19 1 71 129 110 167 5.82e-21 89.0
MS.gene32168.t1 MTR_4g086190 65.217 69 21 2 73 141 96 161 6.29e-21 87.4
MS.gene32168.t1 MTR_5g085100 65.079 63 21 1 69 131 42 103 7.69e-21 88.2
MS.gene32168.t1 MTR_2g105380 54.545 77 34 1 56 132 100 175 3.96e-20 87.4
MS.gene32168.t1 MTR_1g087920 65.000 60 20 1 73 132 77 135 5.72e-20 86.3
MS.gene32168.t1 MTR_2g014340 61.538 65 24 1 69 133 15 78 7.53e-20 83.6
MS.gene32168.t1 MTR_8g022820 59.722 72 27 2 62 132 111 181 8.02e-20 86.7
MS.gene32168.t1 MTR_8g022820 59.722 72 27 2 62 132 112 182 8.33e-20 86.7
MS.gene32168.t1 MTR_8g022820 59.722 72 27 2 62 132 112 182 8.33e-20 86.7
MS.gene32168.t1 MTR_1g090170 48.889 90 41 2 45 130 120 208 9.61e-20 85.5
MS.gene32168.t1 MTR_2g435590 67.241 58 18 1 73 130 96 152 1.07e-19 84.7
MS.gene32168.t1 MTR_1g090170 48.889 90 41 2 45 130 207 295 1.22e-19 86.3
MS.gene32168.t1 MTR_5g062700 62.500 64 23 1 67 130 167 229 1.35e-19 85.9
MS.gene32168.t1 MTR_4g086220 67.797 59 18 1 73 131 96 153 1.44e-19 84.0
MS.gene32168.t1 MTR_8g069360 70.175 57 16 1 73 129 44 99 2.19e-19 85.9
MS.gene32168.t1 MTR_3g090760 54.412 68 30 1 71 138 111 177 2.52e-19 85.1
MS.gene32168.t1 MTR_2g090235 66.667 60 19 1 71 130 216 274 5.04e-19 84.7
MS.gene32168.t1 MTR_1g028560 61.667 60 22 1 70 129 112 170 5.39e-19 84.0
MS.gene32168.t1 MTR_3g074130 65.000 60 20 1 71 130 148 206 6.31e-19 83.6
MS.gene32168.t1 MTR_5g075570 53.731 67 30 1 68 134 119 184 6.83e-19 82.8
MS.gene32168.t1 MTR_4g078710 48.864 88 41 2 43 130 1 84 8.59e-19 81.3
MS.gene32168.t1 MTR_4g119270 51.852 81 35 2 49 129 32 108 9.42e-19 83.2
MS.gene32168.t1 MTR_0939s0010 57.500 80 28 3 73 147 65 143 1.15e-18 80.5
MS.gene32168.t1 MTR_2g089170 60.938 64 23 2 73 135 65 127 4.00e-18 79.0
MS.gene32168.t1 MTR_8g090350 58.730 63 25 1 68 130 108 169 4.22e-18 80.9
MS.gene32168.t1 MTR_7g084370 70.690 58 14 2 73 129 42 97 6.28e-18 80.1
MS.gene32168.t1 MTR_5g083340 63.934 61 21 1 70 130 82 141 6.88e-18 81.3
MS.gene32168.t1 MTR_8g099215 59.322 59 23 1 71 129 105 162 7.02e-18 80.5
MS.gene32168.t1 MTR_2g019750 50.633 79 35 2 51 129 31 105 7.07e-18 80.1
MS.gene32168.t1 MTR_8g006410 46.914 81 41 2 56 136 35 113 1.87e-17 77.4
MS.gene32168.t1 MTR_7g046260 46.512 86 41 2 45 130 37 117 2.05e-17 78.2
MS.gene32168.t1 MTR_5g032820 66.667 57 18 1 73 129 46 101 2.74e-17 79.3
MS.gene32168.t1 MTR_4g111915 47.561 82 39 2 49 130 32 109 3.16e-17 75.5
MS.gene32168.t1 MTR_3g110205 56.452 62 26 1 69 130 39 99 3.20e-17 76.6
MS.gene32168.t1 MTR_3g102100 50.000 68 33 1 63 130 35 101 3.38e-17 76.3
MS.gene32168.t1 MTR_6g088405 60.345 58 22 1 73 130 44 100 3.55e-17 77.0
MS.gene32168.t1 MTR_8g013860 53.226 62 28 1 69 130 43 103 5.77e-17 76.3
MS.gene32168.t1 MTR_5g008540 49.315 73 36 1 67 139 18 89 8.80e-17 72.8
MS.gene32168.t1 MTR_2g101340 56.897 58 24 1 73 130 41 97 1.69e-16 75.1
MS.gene32168.t1 MTR_4g112490 47.561 82 39 2 49 130 32 109 1.69e-16 75.1
MS.gene32168.t1 MTR_8g102800 58.621 58 23 1 73 130 37 93 2.76e-16 75.1
MS.gene32168.t1 MTR_2g043050 50.667 75 32 2 60 130 2 75 4.00e-16 74.3
MS.gene32168.t1 MTR_4g100650 51.515 66 31 1 65 130 66 130 6.88e-16 74.3
MS.gene32168.t1 MTR_1g019110 48.571 70 35 1 71 140 42 110 7.31e-16 72.8
MS.gene32168.t1 MTR_4g035430 54.098 61 27 1 73 133 32 91 7.55e-16 73.6
MS.gene32168.t1 MTR_4g114570 55.738 61 26 1 71 131 5 64 9.10e-16 73.2
MS.gene32168.t1 MTR_4g010640 55.556 63 27 1 69 131 3 64 1.38e-15 72.8
MS.gene32168.t1 MTR_7g011630 51.899 79 34 3 54 129 20 97 1.78e-15 74.7
MS.gene32168.t1 MTR_5g012910 53.226 62 28 1 69 130 24 84 1.86e-15 71.6
MS.gene32168.t1 MTR_2g103700 52.381 63 29 1 71 133 5 66 2.50e-15 71.2
MS.gene32168.t1 MTR_7g117690 50.820 61 29 1 73 133 28 87 4.63e-15 70.5
MS.gene32168.t1 MTR_7g092190 55.172 58 25 1 73 130 30 86 6.28e-15 72.0
MS.gene32168.t1 MTR_5g016750 52.459 61 28 1 70 130 22 81 6.30e-15 70.1
MS.gene32168.t1 MTR_8g027465 47.761 67 34 1 69 135 35 100 7.04e-15 70.1
MS.gene32168.t1 MTR_6g029180 50.769 65 31 1 73 137 33 96 7.27e-15 72.0
MS.gene32168.t1 MTR_3g106290 52.381 63 29 1 68 130 3 64 1.03e-14 69.7
MS.gene32168.t1 MTR_5g083330 56.452 62 26 1 69 130 31 91 1.03e-14 71.6
MS.gene32168.t1 MTR_7g085810 42.529 87 40 2 73 150 30 115 1.04e-14 71.2
MS.gene32168.t1 MTR_2g043030 55.172 58 25 1 73 130 19 75 1.22e-14 70.1
MS.gene32168.t1 MTR_1g014860 43.902 82 39 2 49 130 4 78 1.45e-14 70.1
MS.gene32168.t1 MTR_2g016730 48.611 72 36 1 60 131 10 80 2.16e-14 70.9
MS.gene32168.t1 MTR_5g008470 53.571 56 25 1 75 130 77 131 2.41e-14 68.6
MS.gene32168.t1 MTR_6g012970 53.226 62 28 1 68 129 33 93 2.69e-14 70.9
MS.gene32168.t1 MTR_8g085960 54.386 57 25 1 73 129 25 80 3.21e-14 69.3
MS.gene32168.t1 MTR_4g008860 52.381 63 29 1 68 130 3 64 3.86e-14 68.6
MS.gene32168.t1 MTR_1g014800 41.026 78 44 2 53 130 12 87 5.01e-14 68.6
MS.gene32168.t1 MTR_1g014820 43.836 73 38 2 60 130 12 83 6.05e-14 68.9
MS.gene32168.t1 MTR_3g105510 50.000 66 30 2 65 129 29 92 6.36e-14 68.6
MS.gene32168.t1 MTR_1g074280 61.667 60 23 0 73 132 17 76 6.71e-14 65.9
MS.gene32168.t1 MTR_5g085125 55.556 63 27 1 69 131 12 73 7.06e-14 67.0
MS.gene32168.t1 MTR_7g070220 56.250 64 20 2 73 129 78 140 8.38e-14 69.7
MS.gene32168.t1 MTR_1g014780 42.683 82 40 2 49 130 20 94 9.09e-14 68.2
MS.gene32168.t1 MTR_3g098580 61.538 65 24 1 69 133 72 135 1.16e-13 68.2
MS.gene32168.t1 MTR_8g032610 42.105 76 43 1 71 146 25 99 1.21e-13 68.6
MS.gene32168.t1 MTR_5g082950 59.649 57 22 1 73 129 66 121 1.29e-13 68.9
MS.gene32168.t1 MTR_2g043040 53.448 58 26 1 73 130 19 75 1.39e-13 67.4
MS.gene32168.t1 MTR_4g082345 51.613 62 29 1 68 129 43 103 1.53e-13 68.6
MS.gene32168.t1 MTR_6g088425 59.677 62 24 1 69 130 45 105 1.87e-13 67.4
MS.gene32168.t1 MTR_1g074290 63.333 60 22 0 73 132 17 76 2.13e-13 65.9
MS.gene32168.t1 MTR_3g095190 48.039 102 41 3 40 130 126 226 3.81e-13 67.4
MS.gene32168.t1 MTR_6g033255 66.154 65 21 1 69 133 16 79 7.50e-13 65.1
MS.gene32168.t1 MTR_8g023680 69.048 42 12 1 73 114 116 156 8.77e-13 66.6
MS.gene32168.t1 MTR_1g097190 52.727 55 25 1 68 122 18 71 8.90e-13 63.5
MS.gene32168.t1 MTR_2g043020 51.724 58 27 1 73 130 19 75 1.04e-12 64.7
MS.gene32168.t1 MTR_1g101600 52.632 57 26 1 73 129 41 96 1.54e-12 64.3
MS.gene32168.t1 MTR_1g006660 55.714 70 28 2 69 138 43 109 1.94e-12 64.7
MS.gene32168.t1 MTR_6g466130 42.529 87 48 2 43 129 37 121 2.35e-12 64.3
MS.gene32168.t1 MTR_4g102670 46.032 63 32 2 68 130 10 70 2.88e-12 62.8
MS.gene32168.t1 MTR_1g074270 65.909 44 14 1 88 130 22 65 8.18e-12 60.5
MS.gene32168.t1 MTR_2g085015 44.068 59 32 1 73 130 47 105 1.55e-11 62.0
MS.gene32168.t1 MTR_6g465510 47.619 63 32 1 73 135 33 94 2.22e-11 61.2
MS.gene32168.t1 MTR_6g465430 50.000 62 28 2 69 129 50 109 2.98e-11 61.2
MS.gene32168.t1 MTR_5g008790 46.774 62 30 2 71 130 16 76 3.57e-11 59.7
MS.gene32168.t1 MTR_1g105400 33.010 103 57 2 60 162 102 192 3.78e-11 61.6
MS.gene32168.t1 MTR_6g466000 40.230 87 50 2 43 129 28 112 5.21e-11 60.5
MS.gene32168.t1 MTR_4g134870 73.684 38 10 0 89 126 331 368 5.35e-11 61.6
MS.gene32168.t1 MTR_6g465690 41.176 85 48 2 45 129 36 118 6.16e-11 60.5
MS.gene32168.t1 MTR_6g465530 50.877 57 27 1 73 129 33 88 6.54e-11 59.7
MS.gene32168.t1 MTR_4g130270 29.710 138 84 4 67 195 45 178 7.69e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32168.t1 AT3G23240 64.444 180 58 3 28 203 36 213 1.89e-73 221
MS.gene32168.t1 AT2G31230 53.005 183 53 3 52 202 61 242 2.93e-52 168
MS.gene32168.t1 AT1G06160 50.000 182 57 3 53 201 62 242 1.66e-38 133
MS.gene32168.t1 AT5G47220 50.000 130 41 3 28 133 48 177 1.90e-35 125
MS.gene32168.t1 AT4G17500 47.826 138 40 2 28 133 71 208 9.68e-35 124
MS.gene32168.t1 AT2G44840 48.739 119 48 2 28 133 34 152 3.99e-30 111
MS.gene32168.t1 AT5G43410 80.000 60 12 0 73 132 15 74 5.69e-30 108
MS.gene32168.t1 AT3G23230 71.875 64 18 0 69 132 16 79 4.66e-28 103
MS.gene32168.t1 AT5G47230 46.923 130 58 3 15 133 87 216 5.74e-28 107
MS.gene32168.t1 AT5G51190 69.841 63 19 0 70 132 69 131 7.77e-28 105
MS.gene32168.t1 AT4G18450 62.338 77 27 2 69 144 106 181 9.37e-27 104
MS.gene32168.t1 AT4G17490 69.231 65 20 0 69 133 133 197 1.11e-26 103
MS.gene32168.t1 AT5G61600 65.079 63 22 0 71 133 86 148 6.19e-26 100
MS.gene32168.t1 AT3G16770 58.824 85 29 3 51 130 52 135 1.12e-24 97.8
MS.gene32168.t1 AT5G07580 59.494 79 29 1 54 132 94 169 1.15e-24 96.7
MS.gene32168.t1 AT2G33710 66.154 65 21 1 69 133 66 129 1.82e-24 96.3
MS.gene32168.t1 AT2G33710 66.154 65 21 1 69 133 66 129 2.14e-24 96.7
MS.gene32168.t1 AT5G13330 53.846 78 34 2 56 133 23 98 2.57e-23 93.2
MS.gene32168.t1 AT3G23220 74.603 63 16 0 70 132 11 73 4.56e-23 90.5
MS.gene32168.t1 AT1G04370 73.438 64 17 0 69 132 16 79 8.86e-23 89.7
MS.gene32168.t1 AT5G61890 61.538 65 24 1 69 133 86 149 3.99e-22 90.9
MS.gene32168.t1 AT2G47520 57.143 77 30 2 62 136 37 112 6.52e-22 88.6
MS.gene32168.t1 AT4G11140 55.405 74 32 1 71 144 85 157 3.13e-21 89.4
MS.gene32168.t1 AT4G28140 58.750 80 30 3 71 148 141 219 3.74e-21 89.4
MS.gene32168.t1 AT5G44210 64.062 64 22 1 68 131 28 90 1.11e-20 85.9
MS.gene32168.t1 AT1G36060 65.625 64 21 1 68 131 138 200 1.19e-20 88.2
MS.gene32168.t1 AT3G20310 52.874 87 40 1 69 155 23 108 1.31e-20 86.7
MS.gene32168.t1 AT1G50640 64.062 64 22 1 69 132 24 86 1.49e-20 86.3
MS.gene32168.t1 AT2G22200 61.429 70 22 3 73 142 71 135 1.50e-20 87.0
MS.gene32168.t1 AT1G03800 60.606 66 25 1 66 131 46 110 1.63e-20 86.7
MS.gene32168.t1 AT3G15210 56.410 78 30 2 69 146 21 94 2.13e-20 85.9
MS.gene32168.t1 AT1G72360 48.750 80 40 1 53 132 54 132 2.16e-20 86.7
MS.gene32168.t1 AT1G72360 54.167 72 32 1 61 132 13 83 3.50e-20 85.1
MS.gene32168.t1 AT3G61630 51.220 82 35 2 69 146 101 181 3.53e-20 87.0
MS.gene32168.t1 AT1G22190 51.190 84 38 2 47 130 59 139 4.22e-20 85.9
MS.gene32168.t1 AT1G72360 53.086 81 36 2 53 132 55 134 7.26e-20 85.1
MS.gene32168.t1 AT1G28360 62.903 62 22 1 69 130 8 68 9.72e-20 83.2
MS.gene32168.t1 AT5G65130 62.121 66 23 2 71 136 109 172 1.01e-19 85.1
MS.gene32168.t1 AT4G27950 51.250 80 33 2 53 132 103 176 1.06e-19 85.9
MS.gene32168.t1 AT5G65130 62.121 66 23 2 71 136 111 174 1.13e-19 85.1
MS.gene32168.t1 AT1G78080 44.248 113 59 3 68 180 147 255 1.19e-19 85.5
MS.gene32168.t1 AT2G20880 47.312 93 41 2 38 130 159 243 1.67e-19 85.1
MS.gene32168.t1 AT5G61590 59.740 77 29 1 58 132 90 166 2.63e-19 82.4
MS.gene32168.t1 AT4G13620 65.000 60 20 1 71 130 230 288 3.13e-19 85.1
MS.gene32168.t1 AT5G18560 60.294 68 23 2 62 129 47 110 5.36e-19 84.0
MS.gene32168.t1 AT4G39780 62.295 61 22 1 70 130 90 149 6.08e-19 82.8
MS.gene32168.t1 AT5G13910 53.750 80 32 2 50 129 1 75 6.20e-19 81.6
MS.gene32168.t1 AT4G23750 52.778 72 33 1 60 131 109 179 9.35e-19 83.2
MS.gene32168.t1 AT4G23750 52.778 72 33 1 60 131 109 179 9.35e-19 83.2
MS.gene32168.t1 AT1G28370 45.263 95 48 2 36 130 24 114 1.23e-18 80.9
MS.gene32168.t1 AT1G28370 53.247 77 32 2 54 130 4 76 1.30e-18 79.7
MS.gene32168.t1 AT4G31060 51.471 68 32 1 65 132 19 85 1.76e-18 79.7
MS.gene32168.t1 AT4G32800 55.882 68 29 1 63 130 9 75 2.58e-18 80.1
MS.gene32168.t1 AT2G46310 44.231 104 42 5 73 161 99 201 3.38e-18 81.3
MS.gene32168.t1 AT4G06746 52.239 67 31 1 70 136 33 98 5.33e-18 77.8
MS.gene32168.t1 AT1G28160 63.934 61 21 1 69 129 35 94 6.69e-18 79.7
MS.gene32168.t1 AT5G53290 57.377 61 25 1 71 131 123 182 7.07e-18 80.9
MS.gene32168.t1 AT5G25810 54.054 74 33 1 57 130 20 92 8.30e-18 79.0
MS.gene32168.t1 AT5G25390 60.656 61 23 1 71 131 5 64 3.11e-17 76.6
MS.gene32168.t1 AT1G12890 57.353 68 28 1 62 129 10 76 3.38e-17 77.0
MS.gene32168.t1 AT1G12980 59.375 64 23 2 73 134 57 119 3.51e-17 79.0
MS.gene32168.t1 AT2G25820 62.069 58 21 1 73 130 26 82 5.33e-17 76.6
MS.gene32168.t1 AT1G24590 66.667 57 18 1 73 129 58 113 5.38e-17 78.2
MS.gene32168.t1 AT5G25390 59.016 61 21 1 71 131 5 61 6.74e-17 75.5
MS.gene32168.t1 AT3G16280 58.621 58 23 1 73 130 79 135 6.93e-17 77.0
MS.gene32168.t1 AT3G11020 58.462 65 26 1 72 136 77 140 8.08e-17 77.8
MS.gene32168.t1 AT3G16280 58.621 58 23 1 73 130 61 117 8.40e-17 76.3
MS.gene32168.t1 AT1G22985 58.065 62 24 1 70 129 72 133 9.16e-17 74.7
MS.gene32168.t1 AT1G46768 53.030 66 30 1 71 136 29 93 1.37e-16 73.9
MS.gene32168.t1 AT1G46768 53.030 66 30 1 71 136 29 93 1.37e-16 73.9
MS.gene32168.t1 AT3G50260 44.737 76 41 1 68 143 16 90 1.43e-16 73.9
MS.gene32168.t1 AT1G46768 53.030 66 30 1 71 136 29 93 1.45e-16 73.6
MS.gene32168.t1 AT4G36900 52.381 63 29 1 68 130 25 86 1.47e-16 75.1
MS.gene32168.t1 AT5G11590 56.452 62 26 1 69 130 47 107 1.97e-16 75.5
MS.gene32168.t1 AT1G71450 58.333 60 22 2 72 130 23 80 1.98e-16 74.3
MS.gene32168.t1 AT5G67190 46.575 73 38 1 68 140 16 87 2.24e-16 74.3
MS.gene32168.t1 AT4G16750 46.753 77 40 1 54 130 21 96 3.10e-16 73.6
MS.gene32168.t1 AT2G23340 42.105 95 49 2 68 162 23 111 3.24e-16 73.6
MS.gene32168.t1 AT1G75490 57.627 59 24 1 72 130 41 98 5.62e-16 73.6
MS.gene32168.t1 AT2G35700 53.226 62 28 1 69 130 41 101 5.79e-16 73.2
MS.gene32168.t1 AT5G05410 61.017 59 22 1 72 130 78 135 5.95e-16 75.1
MS.gene32168.t1 AT2G44940 53.226 62 28 1 69 130 96 156 8.55e-16 74.7
MS.gene32168.t1 AT5G05410 61.017 59 22 1 72 130 78 135 8.69e-16 75.1
MS.gene32168.t1 AT5G64750 63.793 58 18 2 80 135 192 248 1.09e-15 75.1
MS.gene32168.t1 AT3G60490 55.932 59 25 1 72 130 70 127 1.49e-15 73.6
MS.gene32168.t1 AT3G57600 55.172 58 25 1 73 130 28 84 2.41e-15 73.2
MS.gene32168.t1 AT2G40340 58.209 67 26 2 73 139 14 78 2.42e-15 73.2
MS.gene32168.t1 AT2G40340 58.209 67 26 2 73 139 14 78 2.42e-15 73.2
MS.gene32168.t1 AT2G40340 58.209 67 26 2 73 139 14 78 2.42e-15 73.2
MS.gene32168.t1 AT4G34410 69.492 59 17 1 72 130 135 192 3.04e-15 72.8
MS.gene32168.t1 AT5G07310 66.129 62 20 1 69 130 88 148 3.17e-15 72.4
MS.gene32168.t1 AT1G01250 52.308 65 30 1 69 133 41 104 3.78e-15 71.2
MS.gene32168.t1 AT5G50080 66.154 65 21 1 69 133 82 145 4.01e-15 71.6
MS.gene32168.t1 AT2G40340 58.209 67 26 2 73 139 72 136 4.40e-15 73.2
MS.gene32168.t1 AT5G50080 66.154 65 21 1 69 133 73 136 4.42e-15 71.6
MS.gene32168.t1 AT2G40340 58.209 67 26 2 73 139 79 143 4.49e-15 73.2
MS.gene32168.t1 AT2G40340 58.209 67 26 2 73 139 72 136 4.66e-15 72.4
MS.gene32168.t1 AT1G71130 53.731 67 25 2 68 129 74 139 5.17e-15 70.1
MS.gene32168.t1 AT1G15360 54.098 61 27 1 71 131 5 64 6.08e-15 70.9
MS.gene32168.t1 AT1G15360 54.098 61 27 1 71 131 5 64 6.08e-15 70.9
MS.gene32168.t1 AT1G43160 60.000 70 27 1 69 138 57 125 7.63e-15 70.5
MS.gene32168.t1 AT2G40350 55.932 59 25 1 73 131 74 131 1.08e-14 69.3
MS.gene32168.t1 AT2G40350 55.932 59 25 1 73 131 67 124 1.14e-14 68.9
MS.gene32168.t1 AT5G19790 48.101 79 37 3 51 129 3 77 1.99e-14 70.1
MS.gene32168.t1 AT1G53170 48.352 91 46 1 43 133 1 90 3.64e-14 68.2
MS.gene32168.t1 AT3G14230 54.321 81 36 1 52 132 102 181 4.48e-14 70.5
MS.gene32168.t1 AT3G14230 54.321 81 36 1 52 132 103 182 4.54e-14 70.5
MS.gene32168.t1 AT3G14230 54.321 81 36 1 52 132 107 186 4.83e-14 70.1
MS.gene32168.t1 AT5G21960 55.932 59 23 2 73 130 7 63 5.12e-14 68.6
MS.gene32168.t1 AT4G25480 47.887 71 36 1 73 143 51 120 5.73e-14 68.6
MS.gene32168.t1 AT5G18450 53.448 58 26 1 72 129 33 89 6.89e-14 69.3
MS.gene32168.t1 AT1G74930 44.444 81 41 3 50 130 1 77 1.12e-13 67.4
MS.gene32168.t1 AT4G25490 46.479 71 37 1 73 143 48 117 1.84e-13 67.0
MS.gene32168.t1 AT5G25190 50.794 63 30 1 68 130 3 64 1.97e-13 66.2
MS.gene32168.t1 AT4G25470 46.479 71 37 1 73 143 51 120 3.75e-13 66.2
MS.gene32168.t1 AT1G21910 42.667 75 42 1 73 147 50 123 4.97e-13 66.2
MS.gene32168.t1 AT1G53910 58.667 75 29 2 62 135 113 186 7.78e-13 66.6
MS.gene32168.t1 AT1G53910 58.667 75 29 2 62 135 113 186 7.78e-13 66.6
MS.gene32168.t1 AT1G53910 58.667 75 29 2 62 135 111 184 7.80e-13 66.6
MS.gene32168.t1 AT1G77200 53.968 63 28 1 68 130 38 99 8.29e-13 65.5
MS.gene32168.t1 AT5G51990 45.070 71 38 1 73 143 54 123 1.04e-12 65.1
MS.gene32168.t1 AT1G19210 46.774 62 30 2 70 130 9 68 2.15e-12 63.5
MS.gene32168.t1 AT1G22810 44.286 70 34 3 64 130 5 72 3.30e-12 62.0
MS.gene32168.t1 AT2G36450 50.794 63 29 2 69 130 11 72 1.06e-11 61.6
MS.gene32168.t1 AT3G54320 41.463 82 40 2 68 141 61 142 1.47e-11 63.2
MS.gene32168.t1 AT3G54320 41.463 82 40 2 68 141 61 142 1.71e-11 63.2
MS.gene32168.t1 AT1G12610 45.902 61 32 1 69 129 26 85 3.67e-11 60.5
MS.gene32168.t1 AT5G65510 33.846 130 68 4 47 162 142 267 4.00e-11 61.6
MS.gene32168.t1 AT5G65510 32.075 159 77 6 47 174 200 358 4.31e-11 62.0
MS.gene32168.t1 AT5G65510 32.075 159 77 6 47 174 200 358 4.31e-11 62.0
MS.gene32168.t1 AT5G65510 32.075 159 77 6 47 174 142 300 4.90e-11 61.6
MS.gene32168.t1 AT1G71520 43.939 66 30 3 70 130 11 74 5.09e-11 58.9
MS.gene32168.t1 AT1G63030 50.877 57 27 1 73 129 30 85 5.54e-11 59.7
MS.gene32168.t1 AT1G63030 50.877 57 27 1 73 129 30 85 5.54e-11 59.7
MS.gene32168.t1 AT1G80580 41.935 124 55 4 20 131 55 173 5.94e-11 60.5

Find 48 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATCTTGGTGCTGATTATT+TGG 0.227126 1.2:+57468939 MS.gene32168:CDS
CATTCTTTGAGAAGGAAAAT+TGG 0.257371 1.2:+57468856 MS.gene32168:CDS
AAATCTGAAGTGGAAGAGTT+TGG 0.342337 1.2:-57468400 None:intergenic
CCCCTGTTGTTGCTCTTAAG+AGG 0.345190 1.2:+57468830 MS.gene32168:CDS
CTCGGGATCGTTCTCGTTGA+AGG 0.349216 1.2:-57468461 None:intergenic
TAGTGCTGAAGCTGCTGCTT+TGG 0.395905 1.2:+57468687 MS.gene32168:CDS
CGAGGAATGGAATGAGGGTT+TGG 0.401828 1.2:+57468650 MS.gene32168:CDS
GCTGTTGTGTTTGAAGATCT+TGG 0.410603 1.2:+57468925 MS.gene32168:CDS
GAAATTTGCAGCAGAGATAA+GGG 0.426052 1.2:+57468621 MS.gene32168:CDS
GGAAATTTGCAGCAGAGATA+AGG 0.428164 1.2:+57468620 MS.gene32168:CDS
GGGAAGATAGTTGAATTCAT+AGG 0.435702 1.2:-57468440 None:intergenic
TTCCTCTTAAGAGCAACAAC+AGG 0.438452 1.2:-57468832 None:intergenic
GATTCTCTAACAATCTCAAC+AGG 0.458717 1.2:-57468763 None:intergenic
AGTGGAAGAGTTTGGAATTG+AGG 0.469757 1.2:-57468392 None:intergenic
TCGGGATCGTTCTCGTTGAA+GGG 0.479132 1.2:-57468460 None:intergenic
TGTGATGATGGTTCTGAAGA+TGG 0.489697 1.2:+57468802 MS.gene32168:CDS
ATAGTTGAATTCATAGGAGG+AGG 0.489994 1.2:-57468434 None:intergenic
GTGTCAAGAAGAACAAAGAT+AGG 0.503715 1.2:+57468878 MS.gene32168:CDS
AGAGGAAACATTCTTTGAGA+AGG 0.505396 1.2:+57468848 MS.gene32168:CDS
AGAAGTCGTACCGAGGTGTA+AGG 0.511464 1.2:+57468584 MS.gene32168:CDS
ATAAGGGATTCGACGAGGAA+TGG 0.519223 1.2:+57468637 MS.gene32168:CDS
AAGATAGTTGAATTCATAGG+AGG 0.520766 1.2:-57468437 None:intergenic
AATGGAATGAGGGTTTGGTT+AGG 0.521683 1.2:+57468655 MS.gene32168:CDS
TATTGCAGAAGAACCTCTCA+TGG 0.525031 1.2:-57468731 None:intergenic
GCCGTAGAGAAGCATCTCCT+CGG 0.528260 1.2:-57468479 None:intergenic
CGGTACGACTTCTCCTTCCT+CGG 0.531935 1.2:-57468574 None:intergenic
ATGAATCACTGAGGAGGACA+TGG 0.532558 1.2:-57468991 None:intergenic
CCGTAGAGAAGCATCTCCTC+GGG 0.552041 1.2:-57468478 None:intergenic
AGTGATATGAATTGTGATGA+TGG 0.552854 1.2:+57468790 MS.gene32168:CDS
ATTCGACGAGGAATGGAATG+AGG 0.559425 1.2:+57468644 MS.gene32168:CDS
AACTACAGTGAAGGAAGAAG+AGG 0.577423 1.2:+57468531 MS.gene32168:CDS
AGGTGTAAGGAGAAGACCAT+GGG 0.586469 1.2:+57468597 MS.gene32168:CDS
TCCTCTTAAGAGCAACAACA+GGG 0.588563 1.2:-57468831 None:intergenic
TGAAGAGAATGAACCGAGGA+AGG 0.591846 1.2:+57468561 MS.gene32168:CDS
GAATTGATGAATCACTGAGG+AGG 0.610780 1.2:-57468997 None:intergenic
TTCGACGAGGAATGGAATGA+GGG 0.612578 1.2:+57468645 MS.gene32168:CDS
TCTCAACAAAACTACAGTGA+AGG 0.614019 1.2:+57468522 MS.gene32168:CDS
CCCGAGGAGATGCTTCTCTA+CGG 0.630834 1.2:+57468478 MS.gene32168:CDS
ATGGTCTTCTCCTTACACCT+CGG 0.652870 1.2:-57468594 None:intergenic
CAGAGATAAGGGATTCGACG+AGG 0.694195 1.2:+57468632 MS.gene32168:CDS
CTTCAACGAGAACGATCCCG+AGG 0.698476 1.2:+57468462 MS.gene32168:CDS
GAGGTGTAAGGAGAAGACCA+TGG 0.701326 1.2:+57468596 MS.gene32168:CDS
AGGAAGGAGAAGTCGTACCG+AGG 0.711683 1.2:+57468577 MS.gene32168:CDS
GTTCTGAAGAGAATGAACCG+AGG 0.733463 1.2:+57468557 MS.gene32168:CDS
CCTCTTAAGAGCAACAACAG+GGG 0.742459 1.2:-57468830 None:intergenic
GGTGTAAGGAGAAGACCATG+GGG 0.758068 1.2:+57468598 MS.gene32168:CDS
TTTGAATTGATGAATCACTG+AGG 0.760725 1.2:-57469000 None:intergenic
GTGTAAGGAGAAGACCATGG+GGG 0.800753 1.2:+57468599 MS.gene32168:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AAGATAGTTGAATTCATAGG+AGG - chr1.2:57468440-57468459 None:intergenic 30.0%
AGTGATATGAATTGTGATGA+TGG + chr1.2:57468790-57468809 MS.gene32168:CDS 30.0%
TTCTGATGAAAAATCTGAAG+TGG - chr1.2:57468413-57468432 None:intergenic 30.0%
! CATTCTTTGAGAAGGAAAAT+TGG + chr1.2:57468856-57468875 MS.gene32168:CDS 30.0%
!!! TGTAGTTTTGTTGAGATTGT+TGG - chr1.2:57468518-57468537 None:intergenic 30.0%
ATAGTTGAATTCATAGGAGG+AGG - chr1.2:57468437-57468456 None:intergenic 35.0%
GAAATTTGCAGCAGAGATAA+GGG + chr1.2:57468621-57468640 MS.gene32168:CDS 35.0%
GATTCTCTAACAATCTCAAC+AGG - chr1.2:57468766-57468785 None:intergenic 35.0%
GGGAAGATAGTTGAATTCAT+AGG - chr1.2:57468443-57468462 None:intergenic 35.0%
GTGTCAAGAAGAACAAAGAT+AGG + chr1.2:57468878-57468897 MS.gene32168:CDS 35.0%
TCTCAACAAAACTACAGTGA+AGG + chr1.2:57468522-57468541 MS.gene32168:CDS 35.0%
! AAATCTGAAGTGGAAGAGTT+TGG - chr1.2:57468403-57468422 None:intergenic 35.0%
! AGAGGAAACATTCTTTGAGA+AGG + chr1.2:57468848-57468867 MS.gene32168:CDS 35.0%
!! AGATCTTGGTGCTGATTATT+TGG + chr1.2:57468939-57468958 MS.gene32168:CDS 35.0%
AACTACAGTGAAGGAAGAAG+AGG + chr1.2:57468531-57468550 MS.gene32168:CDS 40.0%
GCTGTTGTGTTTGAAGATCT+TGG + chr1.2:57468925-57468944 MS.gene32168:CDS 40.0%
GGAAATTTGCAGCAGAGATA+AGG + chr1.2:57468620-57468639 MS.gene32168:CDS 40.0%
TATTGCAGAAGAACCTCTCA+TGG - chr1.2:57468734-57468753 None:intergenic 40.0%
TCCTCTTAAGAGCAACAACA+GGG - chr1.2:57468834-57468853 None:intergenic 40.0%
TTCCTCTTAAGAGCAACAAC+AGG - chr1.2:57468835-57468854 None:intergenic 40.0%
! AATGGAATGAGGGTTTGGTT+AGG + chr1.2:57468655-57468674 MS.gene32168:CDS 40.0%
! AGTGGAAGAGTTTGGAATTG+AGG - chr1.2:57468395-57468414 None:intergenic 40.0%
!! TGTGATGATGGTTCTGAAGA+TGG + chr1.2:57468802-57468821 MS.gene32168:CDS 40.0%
AGGTGTAAGGAGAAGACCAT+GGG + chr1.2:57468597-57468616 MS.gene32168:CDS 45.0%
ATAAGGGATTCGACGAGGAA+TGG + chr1.2:57468637-57468656 MS.gene32168:CDS 45.0%
ATGGTCTTCTCCTTACACCT+CGG - chr1.2:57468597-57468616 None:intergenic 45.0%
ATTCGACGAGGAATGGAATG+AGG + chr1.2:57468644-57468663 MS.gene32168:CDS 45.0%
CCTCTTAAGAGCAACAACAG+GGG - chr1.2:57468833-57468852 None:intergenic 45.0%
TGAAGAGAATGAACCGAGGA+AGG + chr1.2:57468561-57468580 MS.gene32168:CDS 45.0%
TTCGACGAGGAATGGAATGA+GGG + chr1.2:57468645-57468664 MS.gene32168:CDS 45.0%
!! GTTCTGAAGAGAATGAACCG+AGG + chr1.2:57468557-57468576 MS.gene32168:CDS 45.0%
!!! CAAGCTGCTTTTTCCATGAG+AGG + chr1.2:57468718-57468737 MS.gene32168:CDS 45.0%
AGAAGTCGTACCGAGGTGTA+AGG + chr1.2:57468584-57468603 MS.gene32168:CDS 50.0%
CAGAGATAAGGGATTCGACG+AGG + chr1.2:57468632-57468651 MS.gene32168:CDS 50.0%
CCCCTGTTGTTGCTCTTAAG+AGG + chr1.2:57468830-57468849 MS.gene32168:CDS 50.0%
CGAGGAATGGAATGAGGGTT+TGG + chr1.2:57468650-57468669 MS.gene32168:CDS 50.0%
GAGGTGTAAGGAGAAGACCA+TGG + chr1.2:57468596-57468615 MS.gene32168:CDS 50.0%
GGTGTAAGGAGAAGACCATG+GGG + chr1.2:57468598-57468617 MS.gene32168:CDS 50.0%
GTGTAAGGAGAAGACCATGG+GGG + chr1.2:57468599-57468618 MS.gene32168:CDS 50.0%
TCGGGATCGTTCTCGTTGAA+GGG - chr1.2:57468463-57468482 None:intergenic 50.0%
TCTGCTGCAAATTTCCCCCA+TGG - chr1.2:57468616-57468635 None:intergenic 50.0%
! TAGTGCTGAAGCTGCTGCTT+TGG + chr1.2:57468687-57468706 MS.gene32168:CDS 50.0%
AGGAAGGAGAAGTCGTACCG+AGG + chr1.2:57468577-57468596 MS.gene32168:CDS 55.0%
CCCGAGGAGATGCTTCTCTA+CGG + chr1.2:57468478-57468497 MS.gene32168:CDS 55.0%
CGGTACGACTTCTCCTTCCT+CGG - chr1.2:57468577-57468596 None:intergenic 55.0%
CTCGGGATCGTTCTCGTTGA+AGG - chr1.2:57468464-57468483 None:intergenic 55.0%
CTTCAACGAGAACGATCCCG+AGG + chr1.2:57468462-57468481 MS.gene32168:CDS 55.0%
!! CCGTAGAGAAGCATCTCCTC+GGG - chr1.2:57468481-57468500 None:intergenic 55.0%
!! GCCGTAGAGAAGCATCTCCT+CGG - chr1.2:57468482-57468501 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 57468376 57469008 57468376 ID=MS.gene32168
chr1.2 mRNA 57468376 57469008 57468376 ID=MS.gene32168.t1;Parent=MS.gene32168
chr1.2 exon 57468376 57469008 57468376 ID=MS.gene32168.t1.exon1;Parent=MS.gene32168.t1
chr1.2 CDS 57468376 57469008 57468376 ID=cds.MS.gene32168.t1;Parent=MS.gene32168.t1
Gene Sequence

>MS.gene32168

ATGGATTCAAGTTCAACCTCAATTCCAAACTCTTCCACTTCAGATTTTTCATCAGAATCCTCCTCCTATGAATTCAACTATCTTCCCTTCAACGAGAACGATCCCGAGGAGATGCTTCTCTACGGCATGATCAACGACGCCAACAATCTCAACAAAACTACAGTGAAGGAAGAAGAGGTAAGTTCTGAAGAGAATGAACCGAGGAAGGAGAAGTCGTACCGAGGTGTAAGGAGAAGACCATGGGGGAAATTTGCAGCAGAGATAAGGGATTCGACGAGGAATGGAATGAGGGTTTGGTTAGGAACATTTGATAGTGCTGAAGCTGCTGCTTTGGCTTATGATCAAGCTGCTTTTTCCATGAGAGGTTCTTCTGCAATACTCAATTTTCCTGTTGAGATTGTTAGAGAATCTCTTAGTGATATGAATTGTGATGATGGTTCTGAAGATGGATGTTCCCCTGTTGTTGCTCTTAAGAGGAAACATTCTTTGAGAAGGAAAATTGGTGTCAAGAAGAACAAAGATAGGAGCAATAATAGTAGTGTTGATAATGCTGTTGTGTTTGAAGATCTTGGTGCTGATTATTTGGAACAATTGTTGATTTCATCTGATGAGTTTCCATGTCCTCCTCAGTGA
Protein sequence

>MS.gene32168.t1

MDSSSTSIPNSSTSDFSSESSSYEFNYLPFNENDPEEMLLYGMINDANNLNKTTVKEEEVSSEENEPRKEKSYRGVRRRPWGKFAAEIRDSTRNGMRVWLGTFDSAEAAALAYDQAAFSMRGSSAILNFPVEIVRESLSDMNCDDGSEDGCSPVVALKRKHSLRRKIGVKKNKDRSNNSSVDNAVVFEDLGADYLEQLLISSDEFPCPPQ