Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32196.t1 | XP_003608224.1 | 99.2 | 630 | 4 | 1 | 1 | 630 | 1 | 629 | 0.00E+00 | 1247.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32196.t1 | Q9FKL6 | 61.8 | 638 | 212 | 10 | 15 | 629 | 13 | 641 | 2.3e-209 | 729.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32196.t1 | G7JRT0 | 99.2 | 630 | 4 | 1 | 1 | 630 | 1 | 629 | 0.0e+00 | 1247.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050669 | MS.gene32196 | 0.804032 | 2.62E-49 | -1.69E-46 |
| MS.gene052546 | MS.gene32196 | 0.857872 | 1.21E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32196.t1 | MTR_4g090970 | 99.206 | 630 | 4 | 1 | 1 | 630 | 1 | 629 | 0.0 | 1301 |
| MS.gene32196.t1 | MTR_2g011810 | 77.445 | 634 | 139 | 2 | 1 | 630 | 1 | 634 | 0.0 | 1016 |
| MS.gene32196.t1 | MTR_4g128600 | 64.399 | 632 | 199 | 9 | 15 | 629 | 14 | 636 | 0.0 | 810 |
| MS.gene32196.t1 | MTR_2g450080 | 54.575 | 623 | 240 | 10 | 12 | 628 | 8 | 593 | 0.0 | 635 |
| MS.gene32196.t1 | MTR_8g104510 | 46.193 | 394 | 198 | 6 | 13 | 397 | 2 | 390 | 1.97e-114 | 350 |
| MS.gene32196.t1 | MTR_6g083730 | 41.955 | 491 | 253 | 12 | 13 | 479 | 2 | 484 | 1.25e-112 | 346 |
| MS.gene32196.t1 | MTR_8g104490 | 46.134 | 388 | 193 | 5 | 13 | 389 | 2 | 384 | 3.20e-112 | 345 |
| MS.gene32196.t1 | MTR_4g106810 | 45.662 | 438 | 227 | 8 | 15 | 447 | 4 | 435 | 8.06e-112 | 346 |
| MS.gene32196.t1 | MTR_8g104490 | 47.797 | 295 | 150 | 2 | 96 | 389 | 28 | 319 | 4.98e-95 | 298 |
| MS.gene32196.t1 | MTR_6g083320 | 48.993 | 298 | 140 | 5 | 13 | 299 | 2 | 298 | 4.09e-90 | 286 |
| MS.gene32196.t1 | MTR_7g112000 | 34.550 | 411 | 220 | 13 | 55 | 450 | 44 | 420 | 4.90e-59 | 207 |
| MS.gene32196.t1 | MTR_7g111980 | 35.103 | 339 | 201 | 8 | 47 | 379 | 51 | 376 | 1.92e-46 | 173 |
| MS.gene32196.t1 | MTR_7g111960 | 34.024 | 338 | 200 | 8 | 55 | 381 | 60 | 385 | 3.37e-45 | 169 |
| MS.gene32196.t1 | MTR_7g111980 | 37.024 | 289 | 172 | 6 | 96 | 379 | 10 | 293 | 6.07e-44 | 164 |
| MS.gene32196.t1 | MTR_6g083810 | 45.522 | 134 | 61 | 5 | 13 | 135 | 2 | 134 | 3.93e-23 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32196.t1 | AT5G57580 | 61.502 | 639 | 204 | 12 | 15 | 625 | 13 | 637 | 0.0 | 753 |
| MS.gene32196.t1 | AT4G25800 | 62.019 | 624 | 185 | 12 | 24 | 630 | 9 | 597 | 0.0 | 738 |
| MS.gene32196.t1 | AT4G25800 | 62.019 | 624 | 185 | 12 | 24 | 630 | 9 | 597 | 0.0 | 738 |
| MS.gene32196.t1 | AT2G18750 | 58.488 | 648 | 221 | 12 | 1 | 629 | 1 | 619 | 0.0 | 736 |
| MS.gene32196.t1 | AT2G18750 | 58.488 | 648 | 221 | 12 | 1 | 629 | 1 | 619 | 0.0 | 736 |
| MS.gene32196.t1 | AT2G18750 | 58.488 | 648 | 221 | 12 | 1 | 629 | 1 | 619 | 0.0 | 736 |
| MS.gene32196.t1 | AT2G24300 | 53.333 | 615 | 247 | 11 | 25 | 628 | 18 | 603 | 0.0 | 610 |
| MS.gene32196.t1 | AT2G24300 | 53.333 | 615 | 247 | 11 | 25 | 628 | 14 | 599 | 0.0 | 610 |
| MS.gene32196.t1 | AT4G31000 | 50.651 | 614 | 224 | 12 | 25 | 628 | 18 | 562 | 0.0 | 573 |
| MS.gene32196.t1 | AT2G24300 | 52.265 | 574 | 237 | 10 | 63 | 628 | 8 | 552 | 0.0 | 555 |
| MS.gene32196.t1 | AT4G31000 | 45.114 | 614 | 237 | 13 | 25 | 628 | 18 | 541 | 3.09e-165 | 483 |
| MS.gene32196.t1 | AT5G62570 | 47.967 | 369 | 183 | 6 | 24 | 389 | 15 | 377 | 5.92e-112 | 345 |
| MS.gene32196.t1 | AT5G62570 | 46.739 | 368 | 187 | 6 | 24 | 388 | 15 | 376 | 1.84e-110 | 337 |
| MS.gene32196.t1 | AT5G62570 | 48.596 | 356 | 174 | 6 | 37 | 389 | 13 | 362 | 5.17e-110 | 340 |
| MS.gene32196.t1 | AT1G73805 | 43.655 | 394 | 196 | 13 | 33 | 419 | 27 | 401 | 7.07e-91 | 289 |
| MS.gene32196.t1 | AT5G62570 | 50.357 | 280 | 131 | 5 | 24 | 301 | 15 | 288 | 6.42e-87 | 273 |
| MS.gene32196.t1 | AT5G26920 | 37.466 | 371 | 218 | 5 | 38 | 407 | 28 | 385 | 1.49e-75 | 248 |
| MS.gene32196.t1 | AT5G26920 | 37.466 | 371 | 218 | 5 | 38 | 407 | 28 | 385 | 1.20e-74 | 249 |
| MS.gene32196.t1 | AT5G26920 | 36.927 | 371 | 212 | 6 | 38 | 407 | 28 | 377 | 8.58e-72 | 242 |
Find 169 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTTTCCCGCCAGTAAAA+AGG | 0.203080 | 4.4:+22842769 | None:intergenic |
| CAACTTCAAAGAAGTGAAAA+TGG | 0.241246 | 4.4:-22840450 | MS.gene32196:CDS |
| CTAGGTCCCACCAAGCTTAA+TGG | 0.270553 | 4.4:-22843198 | MS.gene32196:CDS |
| ATCTTTCTTATGTAGATTCT+TGG | 0.271515 | 4.4:-22842023 | MS.gene32196:intron |
| AAAATGCGTTATCATCAAAT+TGG | 0.299882 | 4.4:+22840511 | None:intergenic |
| ATAATGAGGACGATGAAAAT+TGG | 0.321922 | 4.4:-22842626 | MS.gene32196:CDS |
| TGAAGAAAGCATATGATAAT+TGG | 0.328947 | 4.4:-22841256 | MS.gene32196:CDS |
| CGATCTGCAAGTTATATTAA+AGG | 0.329553 | 4.4:-22842538 | MS.gene32196:CDS |
| GGCAGCCATACATATTGTTT+TGG | 0.333368 | 4.4:-22842733 | MS.gene32196:CDS |
| TGAAAGAACGTGAAGGAAAA+AGG | 0.334477 | 4.4:-22842575 | MS.gene32196:CDS |
| AACAGTGAAAGCTTCTGATT+TGG | 0.334732 | 4.4:+22842392 | None:intergenic |
| CACTTCTTTGAAGTTGAGCT+TGG | 0.344968 | 4.4:+22840457 | None:intergenic |
| TTGTAGCTCATGTTGTTTGC+AGG | 0.346018 | 4.4:+22840189 | None:intergenic |
| GAAGGCTGGCCTGTATTTAC+TGG | 0.346866 | 4.4:+22841089 | None:intergenic |
| ATCAGAAGCTTTCACTGTTA+AGG | 0.352594 | 4.4:-22842388 | MS.gene32196:CDS |
| CTGGGCCTGACGTGACAATA+TGG | 0.357739 | 4.4:+22842694 | None:intergenic |
| GGTCTCTGATAACAAGTCTT+AGG | 0.357889 | 4.4:+22842151 | None:intergenic |
| CTTACAACTCTGCGTAGAAT+AGG | 0.366420 | 4.4:+22843966 | None:intergenic |
| TGCTCATCCTCAGGCTCTCA+TGG | 0.367536 | 4.4:-22841168 | MS.gene32196:CDS |
| CCCCACATTTCTTGCATCCT+CGG | 0.372526 | 4.4:+22841914 | None:intergenic |
| CTAATACGTATTTCTTCCTC+TGG | 0.373734 | 4.4:+22840336 | None:intergenic |
| AAGAACAAATACATCTAGTT+TGG | 0.377151 | 4.4:+22842662 | None:intergenic |
| TTTACTGGCGGGAAAGTAGA+AGG | 0.384990 | 4.4:-22842765 | MS.gene32196:CDS |
| TCTAGTTTGGCACATGACTC+TGG | 0.387351 | 4.4:+22842675 | None:intergenic |
| CGGCCTTGCATGATGAGGTT+TGG | 0.387698 | 4.4:-22842251 | MS.gene32196:CDS |
| CTGCATACTATCCACCTTCA+AGG | 0.390498 | 4.4:+22844010 | None:intergenic |
| CTAGATGTATTTGTTCTTGA+GGG | 0.392152 | 4.4:-22842657 | MS.gene32196:CDS |
| TCTTCTCCAAAGCGCATAGA+AGG | 0.396583 | 4.4:-22842843 | MS.gene32196:CDS |
| CGGGCAAAGCTGTTGTGGGC+TGG | 0.400583 | 4.4:-22840140 | MS.gene32196:CDS |
| TAGGTCCCACCAAGCTTAAT+GGG | 0.401085 | 4.4:-22843197 | MS.gene32196:CDS |
| TTACTGGATGTGGCAAACTA+TGG | 0.402100 | 4.4:+22841105 | None:intergenic |
| TCTTTCTTATGTAGATTCTT+GGG | 0.403004 | 4.4:-22842022 | MS.gene32196:intron |
| TAGGGCGGAGAAGAGAAGTT+TGG | 0.406515 | 4.4:-22844211 | MS.gene32196:CDS |
| TGATCGGAAACGACCTGCTT+TGG | 0.409072 | 4.4:-22844160 | MS.gene32196:CDS |
| TTCTTTGAAGTTGAGCTTGG+TGG | 0.410617 | 4.4:+22840460 | None:intergenic |
| TCGGGGCCTTCTATGCGCTT+TGG | 0.416408 | 4.4:+22842837 | None:intergenic |
| CTGACAACTCCAGTTGGATA+AGG | 0.417279 | 4.4:-22842482 | MS.gene32196:CDS |
| GCATGTGTGCAGATGGATTA+GGG | 0.419038 | 4.4:+22840211 | None:intergenic |
| AATTGTAAATTATTGTCATC+GGG | 0.421222 | 4.4:+22842819 | None:intergenic |
| TCCTCGGGCAAAGCTGTTGT+GGG | 0.426737 | 4.4:-22840144 | MS.gene32196:CDS |
| TGAAGAAGTGGAGCGTGCTT+TGG | 0.427217 | 4.4:-22843226 | MS.gene32196:CDS |
| GATTCCACTTCTGCTGAAGA+TGG | 0.432531 | 4.4:-22844189 | MS.gene32196:CDS |
| TCTTTCAATTCCCACGAAGA+TGG | 0.434601 | 4.4:-22840237 | MS.gene32196:CDS |
| TGTGGGCTGGCTCAAGCTTA+AGG | 0.435478 | 4.4:-22840127 | MS.gene32196:CDS |
| GTTTCTATTGCAGGTTTATG+TGG | 0.438320 | 4.4:-22841288 | MS.gene32196:intron |
| GAGAATCAGCTGAGTGATAC+TGG | 0.440984 | 4.4:+22841844 | None:intergenic |
| CTTCCTACTCCTTATCCAAC+TGG | 0.446989 | 4.4:+22842473 | None:intergenic |
| AATTTGAAATGCTGGCAGTC+TGG | 0.447809 | 4.4:+22840388 | None:intergenic |
| AAAGCAGGTCGTTTCCGATC+AGG | 0.448193 | 4.4:+22844162 | None:intergenic |
| AGGAGTAGGAAGTTCAGATT+GGG | 0.448651 | 4.4:-22842462 | MS.gene32196:CDS |
| TTCCTCGGGCAAAGCTGTTG+TGG | 0.450883 | 4.4:-22840145 | MS.gene32196:CDS |
| GTAAGTAGAATTTGAAATGC+TGG | 0.458447 | 4.4:+22840380 | None:intergenic |
| AACCCGTGTGTTACTGTTTG+TGG | 0.458824 | 4.4:+22840411 | None:intergenic |
| GTTTGGAGACTGGAGAAGAT+TGG | 0.459512 | 4.4:-22842234 | MS.gene32196:CDS |
| GTTGCTCCTGTATCCATTGA+AGG | 0.461495 | 4.4:+22841071 | None:intergenic |
| TGTGATTGTTGAAGCCTTGA+AGG | 0.462803 | 4.4:-22844024 | MS.gene32196:CDS |
| CCCACATTTCTTGCATCCTC+GGG | 0.466596 | 4.4:+22841915 | None:intergenic |
| CTTTCAATTCCCACGAAGAT+GGG | 0.466934 | 4.4:-22840236 | MS.gene32196:CDS |
| ATCAACCAAAACAATATGTA+TGG | 0.469814 | 4.4:+22842728 | None:intergenic |
| CTGAAGATGGTCAGCCTGAT+CGG | 0.470951 | 4.4:-22844176 | MS.gene32196:CDS |
| AAATACAGGCCAGCCTTCAA+TGG | 0.472050 | 4.4:-22841084 | MS.gene32196:CDS |
| TCTTTGAAGTTGAGCTTGGT+GGG | 0.474459 | 4.4:+22840461 | None:intergenic |
| CTCCTGTATCCATTGAAGGC+TGG | 0.476524 | 4.4:+22841075 | None:intergenic |
| AGCTTAAGGCAGCTTTGAGA+TGG | 0.477017 | 4.4:-22840113 | MS.gene32196:CDS |
| TTTGGAACCTGCTCATCCTC+AGG | 0.477671 | 4.4:-22841177 | MS.gene32196:CDS |
| GGCATGTGTGCAGATGGATT+AGG | 0.478461 | 4.4:+22840210 | None:intergenic |
| GTATTAAGTTTGAATACTCA+TGG | 0.479574 | 4.4:+22841141 | None:intergenic |
| GCATGATGAGGTTTGGAGAC+TGG | 0.484113 | 4.4:-22842244 | MS.gene32196:CDS |
| AAGGAGTAGGAAGTTCAGAT+TGG | 0.484403 | 4.4:-22842463 | MS.gene32196:CDS |
| CAATTGTAAATTATTGTCAT+CGG | 0.484942 | 4.4:+22842818 | None:intergenic |
| GTCTCTACTAAATTACAATC+AGG | 0.488606 | 4.4:-22841207 | MS.gene32196:CDS |
| AGGATGGTTCCTTTCACAAA+AGG | 0.490250 | 4.4:-22842209 | MS.gene32196:CDS |
| TTTGCAGGCATGTGTGCAGA+TGG | 0.494790 | 4.4:+22840204 | None:intergenic |
| AACTTCAAAGAAGTGAAAAT+GGG | 0.494858 | 4.4:-22840449 | MS.gene32196:CDS |
| TTGCCACATCCAGTAAATAC+AGG | 0.495007 | 4.4:-22841098 | MS.gene32196:CDS |
| GGTGGGGAACACTCATCAGC+TGG | 0.498211 | 4.4:+22840478 | None:intergenic |
| ACTAGATGTATTTGTTCTTG+AGG | 0.505473 | 4.4:-22842658 | MS.gene32196:CDS |
| CTGGAGAAGATTGGTAAGGA+TGG | 0.505500 | 4.4:-22842225 | MS.gene32196:CDS |
| GGCCAGCCTTCAATGGATAC+AGG | 0.505597 | 4.4:-22841077 | MS.gene32196:CDS |
| TTGGGGCTGAAAGTTTCCTC+AGG | 0.506119 | 4.4:-22842444 | MS.gene32196:CDS |
| TTCTCTCTCTGAGAGTCAAA+AGG | 0.509605 | 4.4:-22841826 | MS.gene32196:intron |
| ATTAGTATTCTGTGATTGCA+TGG | 0.512283 | 4.4:+22840548 | None:intergenic |
| GCTTAAGGCAGCTTTGAGAT+GGG | 0.515225 | 4.4:-22840112 | MS.gene32196:CDS |
| GAGACTGGAGAAGATTGGTA+AGG | 0.515902 | 4.4:-22842229 | MS.gene32196:CDS |
| CCCGAGGATGCAAGAAATGT+GGG | 0.517046 | 4.4:-22841915 | MS.gene32196:CDS |
| ATTATACCTCCCATTAAGCT+TGG | 0.517672 | 4.4:+22843188 | None:intergenic |
| ACGTTGATCATCATGTAGCT+AGG | 0.518132 | 4.4:-22844230 | MS.gene32196:CDS |
| GCTCATCCTCAGGCTCTCAT+GGG | 0.518303 | 4.4:-22841167 | MS.gene32196:CDS |
| CACAAAAGGCTAAATAAAGC+AGG | 0.518999 | 4.4:-22842195 | MS.gene32196:CDS |
| CTTTGAAGTTGAGCTTGGTG+GGG | 0.521569 | 4.4:+22840462 | None:intergenic |
| ATGAGAGCCTGAGGATGAGC+AGG | 0.524169 | 4.4:+22841170 | None:intergenic |
| AAAGGATGGTGTAGGAACAC+TGG | 0.526677 | 4.4:-22842520 | MS.gene32196:CDS |
| ATGCACGTTATTGAGTATGA+TGG | 0.527033 | 4.4:-22841233 | MS.gene32196:CDS |
| CTGACCATCTTCAGCAGAAG+TGG | 0.529403 | 4.4:+22844185 | None:intergenic |
| TGGCCTGTATTTACTGGATG+TGG | 0.534639 | 4.4:+22841095 | None:intergenic |
| ACAGGCCATATTGTCACGTC+AGG | 0.535118 | 4.4:-22842699 | MS.gene32196:CDS |
| CTAGTTTGGCACATGACTCT+GGG | 0.535530 | 4.4:+22842676 | None:intergenic |
| GGGAAAGTAGAAGGTGAGCA+AGG | 0.540107 | 4.4:-22842756 | MS.gene32196:CDS |
| CTGTGATTGCATGGAGAAGC+TGG | 0.540929 | 4.4:+22840557 | None:intergenic |
| CATTTACTGACAACTCCAGT+TGG | 0.541343 | 4.4:-22842488 | MS.gene32196:CDS |
| GTTATATTAAAGGATGGTGT+AGG | 0.543007 | 4.4:-22842528 | MS.gene32196:CDS |
| GAAGAAGGCTGCTGACAGAC+GGG | 0.544326 | 4.4:-22840076 | MS.gene32196:CDS |
| GGCTTCCCATGTTAAACATA+CGG | 0.545819 | 4.4:+22840271 | None:intergenic |
| AATCACATTTATGAATTGAG+CGG | 0.549042 | 4.4:-22841882 | MS.gene32196:CDS |
| TACCTCCCATTAAGCTTGGT+GGG | 0.550426 | 4.4:+22843192 | None:intergenic |
| TTTGCTCCGTATGTTTAACA+TGG | 0.552386 | 4.4:-22840277 | MS.gene32196:CDS |
| TTAATTAACCTAGCCAAAGC+AGG | 0.554172 | 4.4:+22844147 | None:intergenic |
| GGAAGAAGGCTGCTGACAGA+CGG | 0.555602 | 4.4:-22840077 | MS.gene32196:CDS |
| ACCTCATCATGCAAGGCCGG+TGG | 0.557048 | 4.4:+22842255 | None:intergenic |
| GGAAACGACCTGCTTTGGCT+AGG | 0.557280 | 4.4:-22844155 | MS.gene32196:intron |
| CAAACCTCATCATGCAAGGC+CGG | 0.558896 | 4.4:+22842252 | None:intergenic |
| ATACCTCCCATTAAGCTTGG+TGG | 0.562645 | 4.4:+22843191 | None:intergenic |
| GGAAAGTAGAAGGTGAGCAA+GGG | 0.563214 | 4.4:-22842755 | MS.gene32196:CDS |
| GAGCGTGCTTTGGCAAAACT+AGG | 0.563474 | 4.4:-22843216 | MS.gene32196:CDS |
| AGTGAAAATGGGATGATGCT+TGG | 0.563707 | 4.4:-22840438 | MS.gene32196:CDS |
| GATACAGGAGCAACAGTTGG+AGG | 0.566308 | 4.4:-22841062 | MS.gene32196:intron |
| ATGTCTGCAGGTTATCATGA+TGG | 0.567312 | 4.4:-22840588 | MS.gene32196:intron |
| CGTTGATCATCATGTAGCTA+GGG | 0.569340 | 4.4:-22844229 | MS.gene32196:CDS |
| AAGGATGGTGTAGGAACACT+GGG | 0.570410 | 4.4:-22842519 | MS.gene32196:CDS |
| GATTAGGGTACCCATCTTCG+TGG | 0.574153 | 4.4:+22840226 | None:intergenic |
| TTACATTACGCAATCTCTGA+GGG | 0.574332 | 4.4:+22842130 | None:intergenic |
| TCCCGAGGATGCAAGAAATG+TGG | 0.574766 | 4.4:-22841916 | MS.gene32196:CDS |
| ATGGATACAGGAGCAACAGT+TGG | 0.574946 | 4.4:-22841065 | MS.gene32196:CDS |
| AGATGTATTTGTTCTTGAGG+GGG | 0.579956 | 4.4:-22842655 | MS.gene32196:CDS |
| TATTAAGTTTGAATACTCAT+GGG | 0.580134 | 4.4:+22841142 | None:intergenic |
| ACTCCAGTTGGATAAGGAGT+AGG | 0.582137 | 4.4:-22842476 | MS.gene32196:CDS |
| TAATACGTATTTCTTCCTCT+GGG | 0.582447 | 4.4:+22840337 | None:intergenic |
| ATAACAGGTTAGTGAAGAAG+TGG | 0.585362 | 4.4:-22843238 | MS.gene32196:intron |
| CTTATGTAGATTCTTGGGAG+CGG | 0.585739 | 4.4:-22842017 | MS.gene32196:intron |
| CTGCAAGTTATATTAAAGGA+TGG | 0.591505 | 4.4:-22842534 | MS.gene32196:CDS |
| GCGGCATGTCAAATAAGATG+TGG | 0.597175 | 4.4:-22841998 | MS.gene32196:CDS |
| CTTACATTACGCAATCTCTG+AGG | 0.597794 | 4.4:+22842129 | None:intergenic |
| AGCTGAGTGATACTGGTCGT+TGG | 0.598925 | 4.4:+22841851 | None:intergenic |
| TAGATGTATTTGTTCTTGAG+GGG | 0.601798 | 4.4:-22842656 | MS.gene32196:CDS |
| CAAGGTATTAGCAGAATGCA+CGG | 0.602936 | 4.4:-22844258 | None:intergenic |
| CTTAAGGCAGCTTTGAGATG+GGG | 0.606673 | 4.4:-22840111 | MS.gene32196:CDS |
| ATTTCAAATTCTACTTACAG+AGG | 0.608028 | 4.4:-22840375 | MS.gene32196:CDS |
| CCCACCGGCCTTGCATGATG+AGG | 0.608643 | 4.4:-22842256 | MS.gene32196:CDS |
| CGGCATGTCAAATAAGATGT+GGG | 0.610029 | 4.4:-22841997 | MS.gene32196:CDS |
| CCTCATCATGCAAGGCCGGT+GGG | 0.611404 | 4.4:+22842256 | None:intergenic |
| GAAAGTAGAAGGTGAGCAAG+GGG | 0.613508 | 4.4:-22842754 | MS.gene32196:CDS |
| GCCCACAACAGCTTTGCCCG+AGG | 0.615891 | 4.4:+22840143 | None:intergenic |
| TGCAGATCGCCAGACAGAAG+AGG | 0.616462 | 4.4:+22842552 | None:intergenic |
| TGCACGTTATTGAGTATGAT+GGG | 0.623578 | 4.4:-22841232 | MS.gene32196:CDS |
| TTGCTCCGTATGTTTAACAT+GGG | 0.630977 | 4.4:-22840276 | MS.gene32196:CDS |
| TCTCCAAACCTCATCATGCA+AGG | 0.631609 | 4.4:+22842248 | None:intergenic |
| TGGGAACCCATGAGAGCCTG+AGG | 0.631909 | 4.4:+22841161 | None:intergenic |
| GATTGTTGAAGCCTTGAAGG+TGG | 0.639647 | 4.4:-22844021 | MS.gene32196:CDS |
| AAGTCTTCGCATGCTCAACA+AGG | 0.645387 | 4.4:+22841970 | None:intergenic |
| GTATTAGCAGAATGCACGGA+AGG | 0.647545 | 4.4:-22844254 | None:intergenic |
| AATTGAAAGAAGCATGTGCA+TGG | 0.648736 | 4.4:+22840250 | None:intergenic |
| ACTTTATGTATATTATCCCG+AGG | 0.649519 | 4.4:-22841931 | MS.gene32196:CDS |
| CATATTGTGAAAGAACGTGA+AGG | 0.655058 | 4.4:-22842582 | MS.gene32196:CDS |
| CGAGGATGCAAGAAATGTGG+GGG | 0.655440 | 4.4:-22841913 | MS.gene32196:CDS |
| TGATCATCATGTAGCTAGGG+CGG | 0.657688 | 4.4:-22844226 | MS.gene32196:CDS |
| ATGCCACAAACAGTAACACA+CGG | 0.658400 | 4.4:-22840414 | MS.gene32196:CDS |
| CCGAGGATGCAAGAAATGTG+GGG | 0.658464 | 4.4:-22841914 | MS.gene32196:CDS |
| ATTAGGGTACCCATCTTCGT+GGG | 0.661719 | 4.4:+22840227 | None:intergenic |
| ATTGTAAATTATTGTCATCG+GGG | 0.664217 | 4.4:+22842820 | None:intergenic |
| GCGAAGACTTGTGTTCTCAG+TGG | 0.675741 | 4.4:-22841957 | MS.gene32196:CDS |
| ATACAAGAAACACTACCCAC+CGG | 0.676079 | 4.4:-22842271 | MS.gene32196:CDS |
| TTCACTGTTAAGGATCATCG+TGG | 0.682664 | 4.4:-22842378 | MS.gene32196:CDS |
| GTCCCACCAAGCTTAATGGG+AGG | 0.683314 | 4.4:-22843194 | MS.gene32196:intron |
| AGTTGAAGACTTCTTCCCAG+AGG | 0.686584 | 4.4:-22840352 | MS.gene32196:CDS |
| TGCCACAAACAGTAACACAC+GGG | 0.702886 | 4.4:-22840413 | MS.gene32196:CDS |
| GGATGGTGTAGGAACACTGG+GGG | 0.712741 | 4.4:-22842517 | MS.gene32196:CDS |
| GGAGTAGGAAGTTCAGATTG+GGG | 0.725755 | 4.4:-22842461 | MS.gene32196:CDS |
| GCAGGTTTATGTGGACACGT+TGG | 0.737780 | 4.4:-22841279 | MS.gene32196:intron |
| AGGATGGTGTAGGAACACTG+GGG | 0.798727 | 4.4:-22842518 | MS.gene32196:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATAATTAATGTTATTTC+TGG | - | chr4.4:22842798-22842817 | MS.gene32196:CDS | 10.0% |
| !!! | TTTATATTTAGGTTTTAATT+CGG | - | chr4.4:22842509-22842528 | MS.gene32196:CDS | 10.0% |
| !! | CTAAAAGATATAAACATAAT+TGG | - | chr4.4:22842649-22842668 | MS.gene32196:CDS | 15.0% |
| !! | TAAACAAAAATAGAATAAAC+AGG | + | chr4.4:22840393-22840412 | None:intergenic | 15.0% |
| !! | TATTAACTACAAAAGTAAAA+GGG | - | chr4.4:22843278-22843297 | MS.gene32196:intron | 15.0% |
| !!! | AAACAATAAAAGTGATATTT+TGG | + | chr4.4:22840461-22840480 | None:intergenic | 15.0% |
| !!! | AAGTAGCTTTTTTAATAAAA+TGG | + | chr4.4:22840516-22840535 | None:intergenic | 15.0% |
| !!! | GCTTAGAAAATTTTATATTT+AGG | - | chr4.4:22842498-22842517 | MS.gene32196:CDS | 15.0% |
| !!! | TAATACAAAAATGTTTTACA+AGG | + | chr4.4:22843263-22843282 | None:intergenic | 15.0% |
| !!! | TTTTTATGATAGTAAACAAA+TGG | - | chr4.4:22840633-22840652 | MS.gene32196:intron | 15.0% |
| !!! | TTTTTGTTTAATTCATTTGT+TGG | - | chr4.4:22840403-22840422 | MS.gene32196:CDS | 15.0% |
| !! | AACCTATTCCAAATAAAAAA+TGG | - | chr4.4:22841259-22841278 | MS.gene32196:CDS | 20.0% |
| !! | AATTGTAAATTATTGTCATC+GGG | + | chr4.4:22841474-22841493 | None:intergenic | 20.0% |
| !! | ACCTATTCCAAATAAAAAAT+GGG | - | chr4.4:22841260-22841279 | MS.gene32196:CDS | 20.0% |
| !! | AGACTTAGATATAATTGAAT+AGG | - | chr4.4:22840822-22840841 | MS.gene32196:intron | 20.0% |
| !! | CAATTGTAAATTATTGTCAT+CGG | + | chr4.4:22841475-22841494 | None:intergenic | 20.0% |
| !! | GTATTAACTACAAAAGTAAA+AGG | - | chr4.4:22843277-22843296 | MS.gene32196:intron | 20.0% |
| !! | TATTAAGTTTGAATACTCAT+GGG | + | chr4.4:22843151-22843170 | None:intergenic | 20.0% |
| !! | TGGCTAAAAAAAAATAGAAA+CGG | + | chr4.4:22840441-22840460 | None:intergenic | 20.0% |
| !! | TGTATAATTAAACATGCTAA+GGG | + | chr4.4:22841135-22841154 | None:intergenic | 20.0% |
| !! | TTACAATCAGGATAAAAATT+TGG | - | chr4.4:22843095-22843114 | MS.gene32196:intron | 20.0% |
| !! | TTAGCATGTTTAATTATACA+GGG | - | chr4.4:22841135-22841154 | MS.gene32196:CDS | 20.0% |
| !!! | AATCTATTTTATTTGGTGAT+TGG | - | chr4.4:22841332-22841351 | MS.gene32196:intron | 20.0% |
| !!! | ACTTCGAATAAAACTTTTAT+TGG | + | chr4.4:22843394-22843413 | None:intergenic | 20.0% |
| !!! | AGAAATAACTTTTCATTTTG+AGG | + | chr4.4:22840543-22840562 | None:intergenic | 20.0% |
| !!! | AGTTTTAATGACAAGAAAAT+TGG | + | chr4.4:22843454-22843473 | None:intergenic | 20.0% |
| !!! | GATATTTCCCATTTTTTATT+TGG | + | chr4.4:22841270-22841289 | None:intergenic | 20.0% |
| !!! | GTTTTAATGACAAGAAAATT+GGG | + | chr4.4:22843453-22843472 | None:intergenic | 20.0% |
| !!! | TTTTAATGACAAGAAAATTG+GGG | + | chr4.4:22843452-22843471 | None:intergenic | 20.0% |
| !!! | TTTTTTCTAAATAAAGCCAA+TGG | - | chr4.4:22842980-22842999 | MS.gene32196:intron | 20.0% |
| ! | AAAATGCGTTATCATCAAAT+TGG | + | chr4.4:22843782-22843801 | None:intergenic | 25.0% |
| ! | AACTTCAAAGAAGTGAAAAT+GGG | - | chr4.4:22843841-22843860 | MS.gene32196:intron | 25.0% |
| ! | AAGAACAAATACATCTAGTT+TGG | + | chr4.4:22841631-22841650 | None:intergenic | 25.0% |
| ! | AATATGTGCATAGATAAGAT+AGG | - | chr4.4:22842823-22842842 | MS.gene32196:CDS | 25.0% |
| ! | AATCACATTTATGAATTGAG+CGG | - | chr4.4:22842408-22842427 | MS.gene32196:CDS | 25.0% |
| ! | ATCAACCAAAACAATATGTA+TGG | + | chr4.4:22841565-22841584 | None:intergenic | 25.0% |
| ! | ATCTAAATTCTTGCTCATTT+AGG | - | chr4.4:22842185-22842204 | MS.gene32196:CDS | 25.0% |
| ! | ATCTTTCTTATGTAGATTCT+TGG | - | chr4.4:22842267-22842286 | MS.gene32196:CDS | 25.0% |
| ! | ATTGTAAATTATTGTCATCG+GGG | + | chr4.4:22841473-22841492 | None:intergenic | 25.0% |
| ! | ATTTCAAATTCTACTTACAG+AGG | - | chr4.4:22843915-22843934 | MS.gene32196:intron | 25.0% |
| ! | CATTCAAACAAAAAATGCTA+AGG | - | chr4.4:22840867-22840886 | MS.gene32196:intron | 25.0% |
| ! | CTGTATAATTAAACATGCTA+AGG | + | chr4.4:22841136-22841155 | None:intergenic | 25.0% |
| ! | CTTAGCATGTTTAATTATAC+AGG | - | chr4.4:22841134-22841153 | MS.gene32196:CDS | 25.0% |
| ! | GTATTAAGTTTGAATACTCA+TGG | + | chr4.4:22843152-22843171 | None:intergenic | 25.0% |
| ! | GTCATTAAAACTACTAAAGT+TGG | - | chr4.4:22843462-22843481 | MS.gene32196:intron | 25.0% |
| ! | TAAGAAAATTCACTTCATTG+TGG | - | chr4.4:22840343-22840362 | MS.gene32196:CDS | 25.0% |
| ! | TAATACCCTAATTCAAATTC+AGG | - | chr4.4:22841424-22841443 | MS.gene32196:intron | 25.0% |
| ! | TACCTATTAACAACTTTGTT+TGG | - | chr4.4:22840166-22840185 | MS.gene32196:CDS | 25.0% |
| ! | TAGCATGTTTAATTATACAG+GGG | - | chr4.4:22841136-22841155 | MS.gene32196:CDS | 25.0% |
| ! | TCTTTCTTATGTAGATTCTT+GGG | - | chr4.4:22842268-22842287 | MS.gene32196:CDS | 25.0% |
| ! | TTGTATACTATATAGTCCAA+AGG | + | chr4.4:22842005-22842024 | None:intergenic | 25.0% |
| !! | AATTTTATTGTCTTTTAGCC+TGG | - | chr4.4:22840776-22840795 | MS.gene32196:intron | 25.0% |
| !! | ACACTGCAATCTATTTTATT+TGG | - | chr4.4:22841325-22841344 | MS.gene32196:intron | 25.0% |
| !! | ACCTATTAACAACTTTGTTT+GGG | - | chr4.4:22840167-22840186 | MS.gene32196:CDS | 25.0% |
| !! | GTTAGGAGTGTAAATATAAT+AGG | + | chr4.4:22842766-22842785 | None:intergenic | 25.0% |
| !! | TAATATGTGCTACTAAGAAA+TGG | - | chr4.4:22842883-22842902 | MS.gene32196:intron | 25.0% |
| !! | TGAAGAAAGCATATGATAAT+TGG | - | chr4.4:22843034-22843053 | MS.gene32196:intron | 25.0% |
| !!! | AGTTTTTCGCCTTTTAAAAA+TGG | - | chr4.4:22843642-22843661 | MS.gene32196:intron | 25.0% |
| !!! | ATCATCTTTTTATTTCACTG+TGG | + | chr4.4:22842959-22842978 | None:intergenic | 25.0% |
| !!! | ATTCATTTGTTGGAAAGTTT+TGG | - | chr4.4:22840413-22840432 | MS.gene32196:CDS | 25.0% |
| !!! | ATTTTGCCTAGTTTTATTCT+TGG | - | chr4.4:22842716-22842735 | MS.gene32196:CDS | 25.0% |
| !!! | TCCCATTTTTTATTTGGAAT+AGG | + | chr4.4:22841264-22841283 | None:intergenic | 25.0% |
| !!! | TGTTTTAACGAAATTTCCTT+TGG | - | chr4.4:22841986-22842005 | MS.gene32196:CDS | 25.0% |
| !!! | TTCATTTGTTGGAAAGTTTT+GGG | - | chr4.4:22840414-22840433 | MS.gene32196:CDS | 25.0% |
| !!! | TTTATTTAGCCTTTTGTGAA+AGG | + | chr4.4:22842093-22842112 | None:intergenic | 25.0% |
| AAAATGCTAAGGTTTATGAG+AGG | - | chr4.4:22840878-22840897 | MS.gene32196:intron | 30.0% | |
| AAACAGTCTATAGATTGACA+TGG | + | chr4.4:22843614-22843633 | None:intergenic | 30.0% | |
| AAACTACTAAAGTTGGCAAA+TGG | - | chr4.4:22843469-22843488 | MS.gene32196:intron | 30.0% | |
| AAGAAATGGTAGGTAATCAA+TGG | - | chr4.4:22842897-22842916 | MS.gene32196:intron | 30.0% | |
| AAGTTCGATTTCACTAAAAG+TGG | - | chr4.4:22843410-22843429 | MS.gene32196:intron | 30.0% | |
| ACCCAAACAAAGTTGTTAAT+AGG | + | chr4.4:22840171-22840190 | None:intergenic | 30.0% | |
| ACTAGATGTATTTGTTCTTG+AGG | - | chr4.4:22841632-22841651 | MS.gene32196:intron | 30.0% | |
| ACTTTATGTATATTATCCCG+AGG | - | chr4.4:22842359-22842378 | MS.gene32196:intron | 30.0% | |
| AGAAGACCTGAATTTGAATT+AGG | + | chr4.4:22841433-22841452 | None:intergenic | 30.0% | |
| ATAACCCAACTTTCATCATA+TGG | + | chr4.4:22842584-22842603 | None:intergenic | 30.0% | |
| ATAATGAGGACGATGAAAAT+TGG | - | chr4.4:22841664-22841683 | MS.gene32196:intron | 30.0% | |
| ATACCTTAAGGCTTAAAGTA+AGG | + | chr4.4:22840737-22840756 | None:intergenic | 30.0% | |
| ATTAGTATTCTGTGATTGCA+TGG | + | chr4.4:22843745-22843764 | None:intergenic | 30.0% | |
| CAACTTCAAAGAAGTGAAAA+TGG | - | chr4.4:22843840-22843859 | MS.gene32196:intron | 30.0% | |
| CGATCTGCAAGTTATATTAA+AGG | - | chr4.4:22841752-22841771 | MS.gene32196:intron | 30.0% | |
| CTAGATGTATTTGTTCTTGA+GGG | - | chr4.4:22841633-22841652 | MS.gene32196:intron | 30.0% | |
| CTGCAAGTTATATTAAAGGA+TGG | - | chr4.4:22841756-22841775 | MS.gene32196:intron | 30.0% | |
| GAAGACCTGAATTTGAATTA+GGG | + | chr4.4:22841432-22841451 | None:intergenic | 30.0% | |
| GCTTACTTGGCAAAAAATTT+GGG | - | chr4.4:22841197-22841216 | MS.gene32196:CDS | 30.0% | |
| GTCTCTACTAAATTACAATC+AGG | - | chr4.4:22843083-22843102 | MS.gene32196:intron | 30.0% | |
| GTTATATTAAAGGATGGTGT+AGG | - | chr4.4:22841762-22841781 | MS.gene32196:intron | 30.0% | |
| TAAAGTTGGCAAATGGTATT+TGG | - | chr4.4:22843476-22843495 | MS.gene32196:intron | 30.0% | |
| TAATACGTATTTCTTCCTCT+GGG | + | chr4.4:22843956-22843975 | None:intergenic | 30.0% | |
| TACCTTAAGGCTTAAAGTAA+GGG | + | chr4.4:22840736-22840755 | None:intergenic | 30.0% | |
| TAGATGTATTTGTTCTTGAG+GGG | - | chr4.4:22841634-22841653 | MS.gene32196:intron | 30.0% | |
| TGAAGTGAATCTATGTTACT+TGG | - | chr4.4:22840978-22840997 | MS.gene32196:intron | 30.0% | |
| TTCTGATGACATTTCATCAT+GGG | + | chr4.4:22843548-22843567 | None:intergenic | 30.0% | |
| ! | GTAAGTAGAATTTGAAATGC+TGG | + | chr4.4:22843913-22843932 | None:intergenic | 30.0% |
| !! | TCATTTGTTGGAAAGTTTTG+GGG | - | chr4.4:22840415-22840434 | MS.gene32196:CDS | 30.0% |
| !!! | GCATTTTTTGTTTGAATGTG+TGG | + | chr4.4:22840865-22840884 | None:intergenic | 30.0% |
| AAACCTGCAATAGAAACCAT+TGG | + | chr4.4:22842999-22843018 | None:intergenic | 35.0% | |
| AACAGTGAAAGCTTCTGATT+TGG | + | chr4.4:22841901-22841920 | None:intergenic | 35.0% | |
| ACTTGGCAAAAAATTTGGGT+TGG | - | chr4.4:22841201-22841220 | MS.gene32196:CDS | 35.0% | |
| AGATGTATTTGTTCTTGAGG+GGG | - | chr4.4:22841635-22841654 | MS.gene32196:intron | 35.0% | |
| ATAAAACCCTGTGCAAAGTT+AGG | + | chr4.4:22842783-22842802 | None:intergenic | 35.0% | |
| ATAACAGGTTAGTGAAGAAG+TGG | - | chr4.4:22841052-22841071 | MS.gene32196:intron | 35.0% | |
| ATACAACAATGTTCAGTGCT+TGG | - | chr4.4:22842685-22842704 | MS.gene32196:CDS | 35.0% | |
| ATCAGAAGCTTTCACTGTTA+AGG | - | chr4.4:22841902-22841921 | MS.gene32196:CDS | 35.0% | |
| ATGAAAGAAAGACGCCAATA+TGG | + | chr4.4:22842536-22842555 | None:intergenic | 35.0% | |
| ATGCACGTTATTGAGTATGA+TGG | - | chr4.4:22843057-22843076 | MS.gene32196:intron | 35.0% | |
| ATTATACCTCCCATTAAGCT+TGG | + | chr4.4:22841105-22841124 | None:intergenic | 35.0% | |
| CACAAAAGGCTAAATAAAGC+AGG | - | chr4.4:22842095-22842114 | MS.gene32196:intron | 35.0% | |
| CAGAGTCCAAGAATAAAACT+AGG | + | chr4.4:22842725-22842744 | None:intergenic | 35.0% | |
| CATATTGTGAAAGAACGTGA+AGG | - | chr4.4:22841708-22841727 | MS.gene32196:intron | 35.0% | |
| CTAATACGTATTTCTTCCTC+TGG | + | chr4.4:22843957-22843976 | None:intergenic | 35.0% | |
| CTTCTGATGACATTTCATCA+TGG | + | chr4.4:22843549-22843568 | None:intergenic | 35.0% | |
| GAGACCATATGATGAAAGTT+GGG | - | chr4.4:22842577-22842596 | MS.gene32196:CDS | 35.0% | |
| GGCTTACTTGGCAAAAAATT+TGG | - | chr4.4:22841196-22841215 | MS.gene32196:CDS | 35.0% | |
| GTTTCTATTGCAGGTTTATG+TGG | - | chr4.4:22843002-22843021 | MS.gene32196:intron | 35.0% | |
| TGAAAGAACGTGAAGGAAAA+AGG | - | chr4.4:22841715-22841734 | MS.gene32196:intron | 35.0% | |
| TGAGACCATATGATGAAAGT+TGG | - | chr4.4:22842576-22842595 | MS.gene32196:CDS | 35.0% | |
| TGCACGTTATTGAGTATGAT+GGG | - | chr4.4:22843058-22843077 | MS.gene32196:intron | 35.0% | |
| TTAATTAACCTAGCCAAAGC+AGG | + | chr4.4:22840146-22840165 | None:intergenic | 35.0% | |
| TTACATTACGCAATCTCTGA+GGG | + | chr4.4:22842163-22842182 | None:intergenic | 35.0% | |
| TTGCTCCGTATGTTTAACAT+GGG | - | chr4.4:22844014-22844033 | MS.gene32196:CDS | 35.0% | |
| TTTGCTCCGTATGTTTAACA+TGG | - | chr4.4:22844013-22844032 | MS.gene32196:CDS | 35.0% | |
| ! | AAAGGGTTCTTCAGTTGTTT+TGG | - | chr4.4:22843295-22843314 | MS.gene32196:intron | 35.0% |
| ! | ATGTGCTACTAAGAAATGGT+AGG | - | chr4.4:22842887-22842906 | MS.gene32196:intron | 35.0% |
| ! | TCCAGGGCTAATCTTAATTT+TGG | - | chr4.4:22841233-22841252 | MS.gene32196:CDS | 35.0% |
| ! | TTATTGTCTTTTAGCCTGGT+AGG | - | chr4.4:22840780-22840799 | MS.gene32196:intron | 35.0% |
| !! | AAGTAAGGGTGCATTTGTTT+TGG | + | chr4.4:22840722-22840741 | None:intergenic | 35.0% |
| !! | GGGTATTTTTGTTAGGAAGA+AGG | - | chr4.4:22844199-22844218 | MS.gene32196:CDS | 35.0% |
| !! | GTGAGCTCACCATTTTTAAA+AGG | + | chr4.4:22843654-22843673 | None:intergenic | 35.0% |
| !! | TGAGATGGGGTATTTTTGTT+AGG | - | chr4.4:22844192-22844211 | MS.gene32196:CDS | 35.0% |
| !! | TTTCTTGCTTGCTGTATAAC+AGG | - | chr4.4:22841037-22841056 | MS.gene32196:intron | 35.0% |
| !!! | GGTTTTAATTCGGACCATAT+TGG | - | chr4.4:22842519-22842538 | MS.gene32196:CDS | 35.0% |
| AAGCCAATGGTTTCTATTGC+AGG | - | chr4.4:22842993-22843012 | MS.gene32196:intron | 40.0% | |
| AAGGAGTAGGAAGTTCAGAT+TGG | - | chr4.4:22841827-22841846 | MS.gene32196:CDS | 40.0% | |
| AAGGTTTATGAGAGGCTTTC+TGG | - | chr4.4:22840886-22840905 | MS.gene32196:intron | 40.0% | |
| AATGACAAGAAAATTGGGGC+AGG | + | chr4.4:22843448-22843467 | None:intergenic | 40.0% | |
| ACGTTGATCATCATGTAGCT+AGG | - | chr4.4:22840060-22840079 | MS.gene32196:CDS | 40.0% | |
| AGGAGTAGGAAGTTCAGATT+GGG | - | chr4.4:22841828-22841847 | MS.gene32196:CDS | 40.0% | |
| AGGATGGTTCCTTTCACAAA+AGG | - | chr4.4:22842081-22842100 | MS.gene32196:intron | 40.0% | |
| AGTGAAAATGGGATGATGCT+TGG | - | chr4.4:22843852-22843871 | MS.gene32196:intron | 40.0% | |
| ATACAAGAAACACTACCCAC+CGG | - | chr4.4:22842019-22842038 | MS.gene32196:intron | 40.0% | |
| ATCATATGGTCTCAGAAGTC+AGG | + | chr4.4:22842570-22842589 | None:intergenic | 40.0% | |
| ATGACAAGAAAATTGGGGCA+GGG | + | chr4.4:22843447-22843466 | None:intergenic | 40.0% | |
| ATGCCACAAACAGTAACACA+CGG | - | chr4.4:22843876-22843895 | MS.gene32196:intron | 40.0% | |
| ATGTCTGCAGGTTATCATGA+TGG | - | chr4.4:22843702-22843721 | MS.gene32196:intron | 40.0% | |
| CAAAATGAGTCAGGGTAGAT+TGG | - | chr4.4:22841162-22841181 | MS.gene32196:CDS | 40.0% | |
| CACCCTTACTTTAAGCCTTA+AGG | - | chr4.4:22840731-22840750 | MS.gene32196:intron | 40.0% | |
| CAGATGCAAGTGATACCTTA+AGG | + | chr4.4:22840749-22840768 | None:intergenic | 40.0% | |
| CATTCCATCACAAAAACCTG+AGG | + | chr4.4:22841865-22841884 | None:intergenic | 40.0% | |
| CATTTACTGACAACTCCAGT+TGG | - | chr4.4:22841802-22841821 | MS.gene32196:intron | 40.0% | |
| CGGCATGTCAAATAAGATGT+GGG | - | chr4.4:22842293-22842312 | MS.gene32196:intron | 40.0% | |
| CGTTAGTCAACGTGTGAATT+TGG | - | chr4.4:22841291-22841310 | MS.gene32196:intron | 40.0% | |
| CGTTGATCATCATGTAGCTA+GGG | - | chr4.4:22840061-22840080 | MS.gene32196:CDS | 40.0% | |
| CTGATTACGTATATGTCTGC+AGG | - | chr4.4:22843690-22843709 | MS.gene32196:intron | 40.0% | |
| CTTACAACTCTGCGTAGAAT+AGG | + | chr4.4:22840327-22840346 | None:intergenic | 40.0% | |
| CTTACATTACGCAATCTCTG+AGG | + | chr4.4:22842164-22842183 | None:intergenic | 40.0% | |
| CTTATGTAGATTCTTGGGAG+CGG | - | chr4.4:22842273-22842292 | MS.gene32196:CDS | 40.0% | |
| CTTTCAATTCCCACGAAGAT+GGG | - | chr4.4:22844054-22844073 | MS.gene32196:intron | 40.0% | |
| GAGTGTATTGAACAAAGCGA+GGG | + | chr4.4:22843367-22843386 | None:intergenic | 40.0% | |
| GGCTTCCCATGTTAAACATA+CGG | + | chr4.4:22844022-22844041 | None:intergenic | 40.0% | |
| GGGTTGGAATTAAAAGTCCA+GGG | - | chr4.4:22841217-22841236 | MS.gene32196:CDS | 40.0% | |
| GGTCTCTGATAACAAGTCTT+AGG | + | chr4.4:22842142-22842161 | None:intergenic | 40.0% | |
| TACACTCCTAACTTTGCACA+GGG | - | chr4.4:22842774-22842793 | MS.gene32196:CDS | 40.0% | |
| TACTTTCCCGCCAGTAAAAA+GGG | + | chr4.4:22841523-22841542 | None:intergenic | 40.0% | |
| TATTCTTGGACTCTGTCTTG+TGG | - | chr4.4:22842730-22842749 | MS.gene32196:CDS | 40.0% | |
| TCTTTCAATTCCCACGAAGA+TGG | - | chr4.4:22844053-22844072 | MS.gene32196:intron | 40.0% | |
| TGAGGGGGATTTCAATAATG+AGG | - | chr4.4:22841650-22841669 | MS.gene32196:intron | 40.0% | |
| TGAGTGTATTGAACAAAGCG+AGG | + | chr4.4:22843368-22843387 | None:intergenic | 40.0% | |
| TGTGATTGTTGAAGCCTTGA+AGG | - | chr4.4:22840266-22840285 | MS.gene32196:CDS | 40.0% | |
| TTACACTCCTAACTTTGCAC+AGG | - | chr4.4:22842773-22842792 | MS.gene32196:CDS | 40.0% | |
| TTACTGGATGTGGCAAACTA+TGG | + | chr4.4:22843188-22843207 | None:intergenic | 40.0% | |
| TTCACTGTTAAGGATCATCG+TGG | - | chr4.4:22841912-22841931 | MS.gene32196:CDS | 40.0% | |
| TTGCCACATCCAGTAAATAC+AGG | - | chr4.4:22843192-22843211 | MS.gene32196:intron | 40.0% | |
| TTGTGGTTACAAGCACTTCA+TGG | - | chr4.4:22842618-22842637 | MS.gene32196:CDS | 40.0% | |
| TTGTTTGAATGTGTGGTCAG+TGG | + | chr4.4:22840858-22840877 | None:intergenic | 40.0% | |
| ! | AATTTGAAATGCTGGCAGTC+TGG | + | chr4.4:22843905-22843924 | None:intergenic | 40.0% |
| ! | GCAAATGGTATTTGGAACAC+TGG | - | chr4.4:22843484-22843503 | MS.gene32196:intron | 40.0% |
| ! | GCCAAAATTAAGATTAGCCC+TGG | + | chr4.4:22841237-22841256 | None:intergenic | 40.0% |
| ! | GGCAGCCATACATATTGTTT+TGG | - | chr4.4:22841557-22841576 | MS.gene32196:intron | 40.0% |
| ! | GTTTCCTCAGGTTTTTGTGA+TGG | - | chr4.4:22841858-22841877 | MS.gene32196:CDS | 40.0% |
| ! | TGGGTTGGAATTAAAAGTCC+AGG | - | chr4.4:22841216-22841235 | MS.gene32196:CDS | 40.0% |
| ! | TTCTCTCTCTGAGAGTCAAA+AGG | - | chr4.4:22842464-22842483 | MS.gene32196:CDS | 40.0% |
| ! | TTGTAGCTCATGTTGTTTGC+AGG | + | chr4.4:22844104-22844123 | None:intergenic | 40.0% |
| !! | ACTCTGAGATACAGACTTTC+AGG | + | chr4.4:22840922-22840941 | None:intergenic | 40.0% |
| !! | CACTTCTTTGAAGTTGAGCT+TGG | + | chr4.4:22843836-22843855 | None:intergenic | 40.0% |
| !! | GGTAGATTGGTTTGTCTTGT+CGG | - | chr4.4:22841175-22841194 | MS.gene32196:CDS | 40.0% |
| !! | TCTTTGAAGTTGAGCTTGGT+GGG | + | chr4.4:22843832-22843851 | None:intergenic | 40.0% |
| !! | TTCTTTGAAGTTGAGCTTGG+TGG | + | chr4.4:22843833-22843852 | None:intergenic | 40.0% |
| !!! | GTTTTGGTTGATGCAAACAC+AGG | - | chr4.4:22841573-22841592 | MS.gene32196:intron | 40.0% |
| AAAAAGGGGAAGGGATAGTC+TGG | + | chr4.4:22841508-22841527 | None:intergenic | 45.0% | |
| AAAGGATGGTGTAGGAACAC+TGG | - | chr4.4:22841770-22841789 | MS.gene32196:intron | 45.0% | |
| AAATACAGGCCAGCCTTCAA+TGG | - | chr4.4:22843206-22843225 | MS.gene32196:CDS | 45.0% | |
| AACATCTCACCTCCTAAGTG+AGG | + | chr4.4:22842230-22842249 | None:intergenic | 45.0% | |
| AAGGATGGTGTAGGAACACT+GGG | - | chr4.4:22841771-22841790 | MS.gene32196:intron | 45.0% | |
| AAGTCTTCGCATGCTCAACA+AGG | + | chr4.4:22842323-22842342 | None:intergenic | 45.0% | |
| ACATCTCACCTCCTAAGTGA+GGG | + | chr4.4:22842229-22842248 | None:intergenic | 45.0% | |
| ACTCCAGTTGGATAAGGAGT+AGG | - | chr4.4:22841814-22841833 | MS.gene32196:intron | 45.0% | |
| ACTTTCCCGCCAGTAAAAAG+GGG | + | chr4.4:22841522-22841541 | None:intergenic | 45.0% | |
| AGTTGAAGACTTCTTCCCAG+AGG | - | chr4.4:22843938-22843957 | MS.gene32196:intron | 45.0% | |
| ATACCTCCCATTAAGCTTGG+TGG | + | chr4.4:22841102-22841121 | None:intergenic | 45.0% | |
| ATGGATACAGGAGCAACAGT+TGG | - | chr4.4:22843225-22843244 | MS.gene32196:CDS | 45.0% | |
| CGATGAGCCAAAAAGTTCCT+CGG | - | chr4.4:22844130-22844149 | MS.gene32196:intron | 45.0% | |
| CTACTTTCCCGCCAGTAAAA+AGG | + | chr4.4:22841524-22841543 | None:intergenic | 45.0% | |
| CTAGTTTGGCACATGACTCT+GGG | + | chr4.4:22841617-22841636 | None:intergenic | 45.0% | |
| CTGACAACTCCAGTTGGATA+AGG | - | chr4.4:22841808-22841827 | MS.gene32196:intron | 45.0% | |
| CTGCATACTATCCACCTTCA+AGG | + | chr4.4:22840283-22840302 | None:intergenic | 45.0% | |
| CTGGAGAAGATTGGTAAGGA+TGG | - | chr4.4:22842065-22842084 | MS.gene32196:intron | 45.0% | |
| CTTCCTACTCCTTATCCAAC+TGG | + | chr4.4:22841820-22841839 | None:intergenic | 45.0% | |
| GAAAGTAGAAGGTGAGCAAG+GGG | - | chr4.4:22841536-22841555 | MS.gene32196:intron | 45.0% | |
| GAAGAGAATAACAGTGCCAC+CGG | - | chr4.4:22843565-22843584 | MS.gene32196:intron | 45.0% | |
| GAGAATCAGCTGAGTGATAC+TGG | + | chr4.4:22842449-22842468 | None:intergenic | 45.0% | |
| GAGACTGGAGAAGATTGGTA+AGG | - | chr4.4:22842061-22842080 | MS.gene32196:intron | 45.0% | |
| GATGAGCCAAAAAGTTCCTC+GGG | - | chr4.4:22844131-22844150 | MS.gene32196:intron | 45.0% | |
| GATTCCACTTCTGCTGAAGA+TGG | - | chr4.4:22840101-22840120 | MS.gene32196:CDS | 45.0% | |
| GATTGACATGGATTTCGAGC+AGG | + | chr4.4:22843602-22843621 | None:intergenic | 45.0% | |
| GATTGTTGAAGCCTTGAAGG+TGG | - | chr4.4:22840269-22840288 | MS.gene32196:CDS | 45.0% | |
| GCGGCATGTCAAATAAGATG+TGG | - | chr4.4:22842292-22842311 | MS.gene32196:intron | 45.0% | |
| GGAAAGTAGAAGGTGAGCAA+GGG | - | chr4.4:22841535-22841554 | MS.gene32196:intron | 45.0% | |
| GGAGTAGGAAGTTCAGATTG+GGG | - | chr4.4:22841829-22841848 | MS.gene32196:CDS | 45.0% | |
| GTAACCACAACCAGATCTCA+GGG | + | chr4.4:22842608-22842627 | None:intergenic | 45.0% | |
| GTTGCTCCTGTATCCATTGA+AGG | + | chr4.4:22843222-22843241 | None:intergenic | 45.0% | |
| GTTTGGAGACTGGAGAAGAT+TGG | - | chr4.4:22842056-22842075 | MS.gene32196:intron | 45.0% | |
| TACCTCCCATTAAGCTTGGT+GGG | + | chr4.4:22841101-22841120 | None:intergenic | 45.0% | |
| TAGGTCCCACCAAGCTTAAT+GGG | - | chr4.4:22841093-22841112 | MS.gene32196:CDS | 45.0% | |
| TCTCCAAACCTCATCATGCA+AGG | + | chr4.4:22842045-22842064 | None:intergenic | 45.0% | |
| TCTTCTCCAAAGCGCATAGA+AGG | - | chr4.4:22841447-22841466 | MS.gene32196:intron | 45.0% | |
| TGAACAAAGCGAGGGAAAAG+TGG | + | chr4.4:22843359-22843378 | None:intergenic | 45.0% | |
| TGACAAGAAAATTGGGGCAG+GGG | + | chr4.4:22843446-22843465 | None:intergenic | 45.0% | |
| TGATCATCATGTAGCTAGGG+CGG | - | chr4.4:22840064-22840083 | MS.gene32196:CDS | 45.0% | |
| TGCCACAAACAGTAACACAC+GGG | - | chr4.4:22843877-22843896 | MS.gene32196:intron | 45.0% | |
| TGGCCTGTATTTACTGGATG+TGG | + | chr4.4:22843198-22843217 | None:intergenic | 45.0% | |
| TGTAACCACAACCAGATCTC+AGG | + | chr4.4:22842609-22842628 | None:intergenic | 45.0% | |
| TTTACTGGCGGGAAAGTAGA+AGG | - | chr4.4:22841525-22841544 | MS.gene32196:intron | 45.0% | |
| ! | AACCCGTGTGTTACTGTTTG+TGG | + | chr4.4:22843882-22843901 | None:intergenic | 45.0% |
| ! | ATTAGGGTACCCATCTTCGT+GGG | + | chr4.4:22844066-22844085 | None:intergenic | 45.0% |
| ! | CTATCCCTTCCCCTTTTTAC+TGG | - | chr4.4:22841510-22841529 | MS.gene32196:intron | 45.0% |
| ! | TCTAGTTTGGCACATGACTC+TGG | + | chr4.4:22841618-22841637 | None:intergenic | 45.0% |
| ! | TCTTTTAGCCTGGTAGGTCT+TGG | - | chr4.4:22840786-22840805 | MS.gene32196:intron | 45.0% |
| !! | AGCTTAAGGCAGCTTTGAGA+TGG | - | chr4.4:22844177-22844196 | MS.gene32196:CDS | 45.0% |
| !! | AGGGGTGTCAAAATGAGTCA+GGG | - | chr4.4:22841154-22841173 | MS.gene32196:CDS | 45.0% |
| !! | CTTAAGGCAGCTTTGAGATG+GGG | - | chr4.4:22844179-22844198 | MS.gene32196:CDS | 45.0% |
| !! | CTTTGAAGTTGAGCTTGGTG+GGG | + | chr4.4:22843831-22843850 | None:intergenic | 45.0% |
| !! | GCATGTGTGCAGATGGATTA+GGG | + | chr4.4:22844082-22844101 | None:intergenic | 45.0% |
| !! | GCTTAAGGCAGCTTTGAGAT+GGG | - | chr4.4:22844178-22844197 | MS.gene32196:CDS | 45.0% |
| !! | GTTTGTCTTGTCGGCTTACT+TGG | - | chr4.4:22841184-22841203 | MS.gene32196:CDS | 45.0% |
| AAAGCAGGTCGTTTCCGATC+AGG | + | chr4.4:22840131-22840150 | None:intergenic | 50.0% | |
| ACAGGCCATATTGTCACGTC+AGG | - | chr4.4:22841591-22841610 | MS.gene32196:intron | 50.0% | |
| AGCTGAGTGATACTGGTCGT+TGG | + | chr4.4:22842442-22842461 | None:intergenic | 50.0% | |
| AGGATGGTGTAGGAACACTG+GGG | - | chr4.4:22841772-22841791 | MS.gene32196:intron | 50.0% | |
| AGTTGAAGCCAAGACCTACC+AGG | + | chr4.4:22840797-22840816 | None:intergenic | 50.0% | |
| CAAACCTCATCATGCAAGGC+CGG | + | chr4.4:22842041-22842060 | None:intergenic | 50.0% | |
| CCCACATTTCTTGCATCCTC+GGG | + | chr4.4:22842378-22842397 | None:intergenic | 50.0% | |
| CCCCACATTTCTTGCATCCT+CGG | + | chr4.4:22842379-22842398 | None:intergenic | 50.0% | |
| CCCGAGGATGCAAGAAATGT+GGG | - | chr4.4:22842375-22842394 | MS.gene32196:CDS | 50.0% | |
| CCGAGGATGCAAGAAATGTG+GGG | - | chr4.4:22842376-22842395 | MS.gene32196:CDS | 50.0% | |
| CGAGCAGGTCACTATTTGTC+CGG | + | chr4.4:22843587-22843606 | None:intergenic | 50.0% | |
| CGAGGATGCAAGAAATGTGG+GGG | - | chr4.4:22842377-22842396 | MS.gene32196:CDS | 50.0% | |
| CTAGGTCCCACCAAGCTTAA+TGG | - | chr4.4:22841092-22841111 | MS.gene32196:CDS | 50.0% | |
| CTCCTGTATCCATTGAAGGC+TGG | + | chr4.4:22843218-22843237 | None:intergenic | 50.0% | |
| CTGAAGATGGTCAGCCTGAT+CGG | - | chr4.4:22840114-22840133 | MS.gene32196:CDS | 50.0% | |
| CTGACCATCTTCAGCAGAAG+TGG | + | chr4.4:22840108-22840127 | None:intergenic | 50.0% | |
| CTGTGATTGCATGGAGAAGC+TGG | + | chr4.4:22843736-22843755 | None:intergenic | 50.0% | |
| GAGCGTGCTTTGGCAAAACT+AGG | - | chr4.4:22841074-22841093 | MS.gene32196:CDS | 50.0% | |
| GATACAGGAGCAACAGTTGG+AGG | - | chr4.4:22843228-22843247 | MS.gene32196:CDS | 50.0% | |
| GCAGGTTTATGTGGACACGT+TGG | - | chr4.4:22843011-22843030 | MS.gene32196:intron | 50.0% | |
| GCATGATGAGGTTTGGAGAC+TGG | - | chr4.4:22842046-22842065 | MS.gene32196:intron | 50.0% | |
| GCGAAGACTTGTGTTCTCAG+TGG | - | chr4.4:22842333-22842352 | MS.gene32196:intron | 50.0% | |
| GGAAAAAGGCCTCTTCTGTC+TGG | - | chr4.4:22841729-22841748 | MS.gene32196:intron | 50.0% | |
| GGGAAAGTAGAAGGTGAGCA+AGG | - | chr4.4:22841534-22841553 | MS.gene32196:intron | 50.0% | |
| TAGGGCGGAGAAGAGAAGTT+TGG | - | chr4.4:22840079-22840098 | MS.gene32196:CDS | 50.0% | |
| TATGCCCTGAGATCTGGTTG+TGG | - | chr4.4:22842601-22842620 | MS.gene32196:CDS | 50.0% | |
| TCCCGAGGATGCAAGAAATG+TGG | - | chr4.4:22842374-22842393 | MS.gene32196:CDS | 50.0% | |
| TGAAGAAGTGGAGCGTGCTT+TGG | - | chr4.4:22841064-22841083 | MS.gene32196:CDS | 50.0% | |
| TGATCGGAAACGACCTGCTT+TGG | - | chr4.4:22840130-22840149 | MS.gene32196:CDS | 50.0% | |
| TTGGGGCTGAAAGTTTCCTC+AGG | - | chr4.4:22841846-22841865 | MS.gene32196:CDS | 50.0% | |
| TTGGGTTATGCCCTGAGATC+TGG | - | chr4.4:22842595-22842614 | MS.gene32196:CDS | 50.0% | |
| TTTGCAGGCATGTGTGCAGA+TGG | + | chr4.4:22844089-22844108 | None:intergenic | 50.0% | |
| ! | GATTAGGGTACCCATCTTCG+TGG | + | chr4.4:22844067-22844086 | None:intergenic | 50.0% |
| ! | GCTTTGCCCGAGGAACTTTT+TGG | + | chr4.4:22844140-22844159 | None:intergenic | 50.0% |
| ! | GGCATGTGTGCAGATGGATT+AGG | + | chr4.4:22844083-22844102 | None:intergenic | 50.0% |
| ! | TCCCTTCCCCTTTTTACTGG+CGG | - | chr4.4:22841513-22841532 | MS.gene32196:intron | 50.0% |
| ! | TTTGGAACCTGCTCATCCTC+AGG | - | chr4.4:22843113-22843132 | MS.gene32196:intron | 50.0% |
| !! | CAGGGGTGTCAAAATGAGTC+AGG | - | chr4.4:22841153-22841172 | MS.gene32196:CDS | 50.0% |
| !! | GAAGGCTGGCCTGTATTTAC+TGG | + | chr4.4:22843204-22843223 | None:intergenic | 50.0% |
| !! | TGTCGACTCTTCCCTCACTT+AGG | - | chr4.4:22842215-22842234 | MS.gene32196:CDS | 50.0% |
| ATGAGAGCCTGAGGATGAGC+AGG | + | chr4.4:22843123-22843142 | None:intergenic | 55.0% | |
| CAAGAAAATTGGGGCAGGGG+TGG | + | chr4.4:22843443-22843462 | None:intergenic | 55.0% | |
| CCCGCCAGTAAAAAGGGGAA+GGG | + | chr4.4:22841517-22841536 | None:intergenic | 55.0% | |
| CGACTCTTCCCTCACTTAGG+AGG | - | chr4.4:22842218-22842237 | MS.gene32196:CDS | 55.0% | |
| CGGCCTTGCATGATGAGGTT+TGG | - | chr4.4:22842039-22842058 | MS.gene32196:intron | 55.0% | |
| CTGGGCCTGACGTGACAATA+TGG | + | chr4.4:22841599-22841618 | None:intergenic | 55.0% | |
| GAAGAAGGCTGCTGACAGAC+GGG | - | chr4.4:22844214-22844233 | MS.gene32196:CDS | 55.0% | |
| GCAGGTCACTATTTGTCCGG+TGG | + | chr4.4:22843584-22843603 | None:intergenic | 55.0% | |
| GCTCATCCTCAGGCTCTCAT+GGG | - | chr4.4:22843123-22843142 | MS.gene32196:intron | 55.0% | |
| GGAAACGACCTGCTTTGGCT+AGG | - | chr4.4:22840135-22840154 | MS.gene32196:CDS | 55.0% | |
| GGAAGAAGGCTGCTGACAGA+CGG | - | chr4.4:22844213-22844232 | MS.gene32196:CDS | 55.0% | |
| GGATGGTGTAGGAACACTGG+GGG | - | chr4.4:22841773-22841792 | MS.gene32196:intron | 55.0% | |
| GGCCAGCCTTCAATGGATAC+AGG | - | chr4.4:22843213-22843232 | MS.gene32196:CDS | 55.0% | |
| GTCCCACCAAGCTTAATGGG+AGG | - | chr4.4:22841096-22841115 | MS.gene32196:CDS | 55.0% | |
| TCCCGCCAGTAAAAAGGGGA+AGG | + | chr4.4:22841518-22841537 | None:intergenic | 55.0% | |
| TCCTCGGGCAAAGCTGTTGT+GGG | - | chr4.4:22844146-22844165 | MS.gene32196:intron | 55.0% | |
| TGCAGATCGCCAGACAGAAG+AGG | + | chr4.4:22841741-22841760 | None:intergenic | 55.0% | |
| TGCTCATCCTCAGGCTCTCA+TGG | - | chr4.4:22843122-22843141 | MS.gene32196:intron | 55.0% | |
| TTCCTCGGGCAAAGCTGTTG+TGG | - | chr4.4:22844145-22844164 | MS.gene32196:intron | 55.0% | |
| ! | CCCTTCCCCTTTTTACTGGC+GGG | - | chr4.4:22841514-22841533 | MS.gene32196:intron | 55.0% |
| !! | TGTGGGCTGGCTCAAGCTTA+AGG | - | chr4.4:22844163-22844182 | MS.gene32196:CDS | 55.0% |
| ACCTCATCATGCAAGGCCGG+TGG | + | chr4.4:22842038-22842057 | None:intergenic | 60.0% | |
| CCTCATCATGCAAGGCCGGT+GGG | + | chr4.4:22842037-22842056 | None:intergenic | 60.0% | |
| GGTGGGGAACACTCATCAGC+TGG | + | chr4.4:22843815-22843834 | None:intergenic | 60.0% | |
| TCGGGGCCTTCTATGCGCTT+TGG | + | chr4.4:22841456-22841475 | None:intergenic | 60.0% | |
| TGGGAACCCATGAGAGCCTG+AGG | + | chr4.4:22843132-22843151 | None:intergenic | 60.0% | |
| CCCACCGGCCTTGCATGATG+AGG | - | chr4.4:22842034-22842053 | MS.gene32196:intron | 65.0% | |
| CGGGCAAAGCTGTTGTGGGC+TGG | - | chr4.4:22844150-22844169 | MS.gene32196:intron | 65.0% | |
| GCCCACAACAGCTTTGCCCG+AGG | + | chr4.4:22844150-22844169 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 22840047 | 22844265 | 22840047 | ID=MS.gene32196 |
| chr4.4 | mRNA | 22840047 | 22844265 | 22840047 | ID=MS.gene32196.t1;Parent=MS.gene32196 |
| chr4.4 | exon | 22844156 | 22844265 | 22844156 | ID=MS.gene32196.t1.exon1;Parent=MS.gene32196.t1 |
| chr4.4 | CDS | 22844156 | 22844265 | 22844156 | ID=cds.MS.gene32196.t1;Parent=MS.gene32196.t1 |
| chr4.4 | exon | 22843971 | 22844046 | 22843971 | ID=MS.gene32196.t1.exon2;Parent=MS.gene32196.t1 |
| chr4.4 | CDS | 22843971 | 22844046 | 22843971 | ID=cds.MS.gene32196.t1;Parent=MS.gene32196.t1 |
| chr4.4 | exon | 22843195 | 22843253 | 22843195 | ID=MS.gene32196.t1.exon3;Parent=MS.gene32196.t1 |
| chr4.4 | CDS | 22843195 | 22843253 | 22843195 | ID=cds.MS.gene32196.t1;Parent=MS.gene32196.t1 |
| chr4.4 | exon | 22842373 | 22842866 | 22842373 | ID=MS.gene32196.t1.exon4;Parent=MS.gene32196.t1 |
| chr4.4 | CDS | 22842373 | 22842866 | 22842373 | ID=cds.MS.gene32196.t1;Parent=MS.gene32196.t1 |
| chr4.4 | exon | 22842134 | 22842294 | 22842134 | ID=MS.gene32196.t1.exon5;Parent=MS.gene32196.t1 |
| chr4.4 | CDS | 22842134 | 22842294 | 22842134 | ID=cds.MS.gene32196.t1;Parent=MS.gene32196.t1 |
| chr4.4 | exon | 22841827 | 22842030 | 22841827 | ID=MS.gene32196.t1.exon6;Parent=MS.gene32196.t1 |
| chr4.4 | CDS | 22841827 | 22842030 | 22841827 | ID=cds.MS.gene32196.t1;Parent=MS.gene32196.t1 |
| chr4.4 | exon | 22841063 | 22841297 | 22841063 | ID=MS.gene32196.t1.exon7;Parent=MS.gene32196.t1 |
| chr4.4 | CDS | 22841063 | 22841297 | 22841063 | ID=cds.MS.gene32196.t1;Parent=MS.gene32196.t1 |
| chr4.4 | exon | 22840047 | 22840600 | 22840047 | ID=MS.gene32196.t1.exon8;Parent=MS.gene32196.t1 |
| chr4.4 | CDS | 22840047 | 22840600 | 22840047 | ID=cds.MS.gene32196.t1;Parent=MS.gene32196.t1 |
| Gene Sequence |
| Protein sequence |
