Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32212.t1 | XP_003608251.2 | 99.3 | 586 | 4 | 0 | 1 | 586 | 3 | 588 | 0.00E+00 | 1196.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32212.t1 | Q570C0 | 56.5 | 565 | 241 | 1 | 24 | 583 | 9 | 573 | 1.5e-186 | 654.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32212.t1 | G7JRV7 | 99.3 | 586 | 4 | 0 | 1 | 586 | 3 | 588 | 0.0e+00 | 1196.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052563 | MS.gene32212 | 0.976806 | 1.55E-142 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32212.t1 | MTR_4g091290 | 99.317 | 586 | 4 | 0 | 1 | 586 | 3 | 588 | 0.0 | 1206 |
| MS.gene32212.t1 | MTR_8g098695 | 83.390 | 590 | 77 | 3 | 1 | 586 | 1 | 573 | 0.0 | 1008 |
| MS.gene32212.t1 | MTR_1g088950 | 53.765 | 571 | 259 | 1 | 21 | 586 | 11 | 581 | 0.0 | 646 |
| MS.gene32212.t1 | MTR_7g083610 | 54.737 | 570 | 249 | 3 | 24 | 586 | 4 | 571 | 0.0 | 631 |
| MS.gene32212.t1 | MTR_5g065490 | 51.042 | 576 | 273 | 4 | 19 | 586 | 42 | 616 | 0.0 | 558 |
| MS.gene32212.t1 | MTR_3g100860 | 49.828 | 580 | 275 | 5 | 22 | 586 | 15 | 593 | 0.0 | 553 |
| MS.gene32212.t1 | MTR_5g081870 | 32.323 | 594 | 369 | 13 | 13 | 586 | 2 | 582 | 1.85e-88 | 285 |
| MS.gene32212.t1 | MTR_3g070140 | 30.664 | 587 | 371 | 10 | 26 | 586 | 17 | 593 | 9.28e-77 | 255 |
| MS.gene32212.t1 | MTR_5g086490 | 46.032 | 126 | 53 | 1 | 24 | 149 | 4 | 114 | 5.00e-28 | 109 |
| MS.gene32212.t1 | MTR_2g021030 | 23.562 | 539 | 304 | 16 | 24 | 537 | 11 | 466 | 2.02e-21 | 99.0 |
| MS.gene32212.t1 | MTR_2g021030 | 23.960 | 505 | 277 | 15 | 24 | 504 | 11 | 432 | 1.34e-20 | 95.5 |
| MS.gene32212.t1 | MTR_1g018790 | 24.632 | 475 | 247 | 18 | 17 | 473 | 57 | 438 | 4.99e-17 | 84.7 |
| MS.gene32212.t1 | MTR_4g094932 | 23.503 | 451 | 254 | 18 | 16 | 426 | 38 | 437 | 3.35e-13 | 72.8 |
| MS.gene32212.t1 | MTR_7g112570 | 25.512 | 537 | 311 | 23 | 16 | 519 | 38 | 518 | 3.38e-13 | 72.8 |
| MS.gene32212.t1 | MTR_7g112570 | 25.512 | 537 | 311 | 23 | 16 | 519 | 38 | 518 | 3.72e-13 | 72.8 |
| MS.gene32212.t1 | MTR_7g112570 | 25.512 | 537 | 311 | 23 | 16 | 519 | 38 | 518 | 4.53e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32212.t1 | AT3G62980 | 56.460 | 565 | 241 | 1 | 24 | 583 | 9 | 573 | 0.0 | 639 |
| MS.gene32212.t1 | AT1G12820 | 54.181 | 574 | 252 | 3 | 24 | 586 | 4 | 577 | 0.0 | 632 |
| MS.gene32212.t1 | AT3G26810 | 54.450 | 573 | 250 | 4 | 24 | 586 | 4 | 575 | 0.0 | 622 |
| MS.gene32212.t1 | AT4G03190 | 52.734 | 567 | 264 | 1 | 24 | 586 | 5 | 571 | 0.0 | 603 |
| MS.gene32212.t1 | AT4G24390 | 51.313 | 571 | 265 | 4 | 26 | 586 | 56 | 623 | 0.0 | 578 |
| MS.gene32212.t1 | AT4G24390 | 51.313 | 571 | 265 | 4 | 26 | 586 | 56 | 623 | 0.0 | 578 |
| MS.gene32212.t1 | AT5G49980 | 50.687 | 582 | 278 | 4 | 13 | 586 | 39 | 619 | 0.0 | 566 |
| MS.gene32212.t1 | AT2G39940 | 31.952 | 579 | 368 | 9 | 26 | 586 | 18 | 588 | 4.26e-95 | 303 |
| MS.gene32212.t1 | AT4G15475 | 24.528 | 530 | 308 | 17 | 24 | 536 | 11 | 465 | 8.88e-22 | 100 |
| MS.gene32212.t1 | AT3G07550 | 24.122 | 427 | 224 | 18 | 9 | 414 | 2 | 349 | 2.10e-11 | 66.6 |
| MS.gene32212.t1 | AT3G07550 | 24.122 | 427 | 224 | 18 | 9 | 414 | 2 | 349 | 2.10e-11 | 66.6 |
Find 129 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACACCCTTTCTGGTTTA+TGG | 0.081215 | 4.4:-22638836 | MS.gene32212:CDS |
| TCCAATGATGTAAAGCTTTC+TGG | 0.105464 | 4.4:+22639098 | None:intergenic |
| TCAACTTGGTTCCTGCAAAT+TGG | 0.172792 | 4.4:-22640796 | MS.gene32212:CDS |
| AGAGAAAGAGCTTTGAAATT+AGG | 0.185626 | 4.4:+22640653 | None:intergenic |
| AGAAGTCTTCACACCCTTTC+TGG | 0.194538 | 4.4:-22638843 | MS.gene32212:CDS |
| TCACACCCTTTCTGGTTTAT+GGG | 0.221558 | 4.4:-22638835 | MS.gene32212:CDS |
| CAACTTGGTTCCTGCAAATT+GGG | 0.244113 | 4.4:-22640795 | MS.gene32212:CDS |
| GTCCTAATCTTCGACGCCTT+TGG | 0.252400 | 4.4:-22638698 | MS.gene32212:CDS |
| CCCAGAAAGCTTTACATCAT+TGG | 0.287120 | 4.4:-22639099 | MS.gene32212:CDS |
| TATGTTTATCGTTCTGTTGC+TGG | 0.293070 | 4.4:-22637866 | MS.gene32212:CDS |
| TCCTAATCTTCGACGCCTTT+GGG | 0.296633 | 4.4:-22638697 | MS.gene32212:intron |
| AGTGTAACACTTCTTATGTT+TGG | 0.320668 | 4.4:+22640845 | None:intergenic |
| GGCTGTTAGTGATGAAAGTT+TGG | 0.351341 | 4.4:-22640696 | MS.gene32212:CDS |
| AATGGAGGTGCATCCCTTCT+TGG | 0.351887 | 4.4:+22637842 | None:intergenic |
| GCACACGGGGTTACTGAATC+AGG | 0.363016 | 4.4:-22638454 | MS.gene32212:CDS |
| TTCTGGTTTATGGGTTGCTT+CGG | 0.367090 | 4.4:-22638826 | MS.gene32212:CDS |
| TTGATGACAAAAGTGGTAAT+TGG | 0.369657 | 4.4:-22639133 | MS.gene32212:CDS |
| ACCTGACATTTGAGTATATA+GGG | 0.370498 | 4.4:-22638186 | MS.gene32212:CDS |
| GGTTCACCCGTCTGGTAATC+TGG | 0.376560 | 4.4:+22638286 | None:intergenic |
| CCAATGATGTAAAGCTTTCT+GGG | 0.380230 | 4.4:+22639099 | None:intergenic |
| CAGCTCTGTGAGCTTGGTAC+TGG | 0.385066 | 4.4:-22638930 | MS.gene32212:CDS |
| GTCTGGTAATCTGGCTGACC+AGG | 0.389112 | 4.4:+22638295 | None:intergenic |
| GAACCTATGGACGAGGCCTT+TGG | 0.389930 | 4.4:-22638268 | MS.gene32212:CDS |
| AGACAGAAGCTCAGTTTCAT+TGG | 0.392214 | 4.4:-22640966 | MS.gene32212:CDS |
| CTCCAAAGGCTTGCTGTGTC+AGG | 0.396046 | 4.4:-22638220 | MS.gene32212:CDS |
| CGTCCATAGGTTCACCCGTC+TGG | 0.415830 | 4.4:+22638278 | None:intergenic |
| TTGAGGAGGGCGCTGCACAC+GGG | 0.416863 | 4.4:-22638468 | MS.gene32212:CDS |
| ACACGTTCCAACACTTCATC+TGG | 0.420875 | 4.4:+22641013 | None:intergenic |
| ATATCAGCACCCCAATTTGC+AGG | 0.422242 | 4.4:+22640785 | None:intergenic |
| GTGTGCAGCGCCCTCCTCAA+AGG | 0.422333 | 4.4:+22638471 | None:intergenic |
| GAAGTGTTGGAACGTGTTCT+TGG | 0.425811 | 4.4:-22641007 | MS.gene32212:CDS |
| AGAAGGAGGTGATGATAGTC+AGG | 0.433187 | 4.4:-22637900 | MS.gene32212:CDS |
| AGCCTTAACTCTTCAAGAAA+AGG | 0.433803 | 4.4:+22640728 | None:intergenic |
| CGAAGTTTACATCATTGCTT+AGG | 0.435730 | 4.4:+22639057 | None:intergenic |
| ACCCAAAGGCGTCGAAGATT+AGG | 0.441455 | 4.4:+22638696 | None:intergenic |
| TGGATTTAGCACTGATGGCT+TGG | 0.443514 | 4.4:-22640618 | MS.gene32212:CDS |
| GCTGCGAAAACTTGAGATAA+GGG | 0.450178 | 4.4:-22638074 | MS.gene32212:CDS |
| TTTGAGGAGGGCGCTGCACA+CGG | 0.456573 | 4.4:-22638469 | MS.gene32212:CDS |
| AGAGTTAAGGCTTAAGAGAA+TGG | 0.457818 | 4.4:-22640717 | MS.gene32212:CDS |
| TTTCATTGGTATGCAAAGAA+TGG | 0.457884 | 4.4:-22640952 | MS.gene32212:CDS |
| AACCTGACACAGCAAGCCTT+TGG | 0.459468 | 4.4:+22638218 | None:intergenic |
| GGGGTGCTGATATTCATTCA+TGG | 0.461105 | 4.4:-22640775 | MS.gene32212:CDS |
| TGTGCAGCGCCCTCCTCAAA+GGG | 0.461411 | 4.4:+22638472 | None:intergenic |
| TTTCAGAGAGTGAGAACAAA+TGG | 0.469459 | 4.4:+22637824 | None:intergenic |
| GTTTACATCATTGCTTAGGT+TGG | 0.470344 | 4.4:+22639061 | None:intergenic |
| TCCCTATATACTCAAATGTC+AGG | 0.472134 | 4.4:+22638185 | None:intergenic |
| GCTCCTCAGCTCTGTGAGCT+TGG | 0.474654 | 4.4:-22638936 | MS.gene32212:CDS |
| CCCTCCTCAAAGGGATCCCC+AGG | 0.475568 | 4.4:+22638481 | None:intergenic |
| TGCTGATATTCATTCATGGT+TGG | 0.476550 | 4.4:-22640771 | MS.gene32212:CDS |
| TTTGAAATTAGGAAAAGAAA+AGG | 0.478989 | 4.4:+22640664 | None:intergenic |
| GACTGCAAAGTGACGATGAA+TGG | 0.480292 | 4.4:-22637977 | MS.gene32212:CDS |
| AAGCCTTTGGAGTTTAGTGC+AGG | 0.480883 | 4.4:+22638231 | None:intergenic |
| CGGCTCTGCATCATGACCCC+TGG | 0.482603 | 4.4:-22638313 | MS.gene32212:CDS |
| AAGTGTTGGAACGTGTTCTT+GGG | 0.483900 | 4.4:-22641006 | MS.gene32212:CDS |
| AGCTGCGAAAACTTGAGATA+AGG | 0.491311 | 4.4:-22638075 | MS.gene32212:CDS |
| GTTGAAGTGATGCAGGAAGA+AGG | 0.492159 | 4.4:-22637917 | MS.gene32212:CDS |
| CCTGGGGATCCCTTTGAGGA+GGG | 0.495250 | 4.4:-22638481 | MS.gene32212:CDS |
| AACAGTAGCAACAGCAGCAT+TGG | 0.495798 | 4.4:+22638366 | None:intergenic |
| TGTTAGCACAAGAAAGGCCT+AGG | 0.496849 | 4.4:-22637946 | MS.gene32212:CDS |
| TCATCTGACGGCAAAAGTAT+AGG | 0.497985 | 4.4:+22638389 | None:intergenic |
| AGCCGAAAATGAGTAAAGTC+GGG | 0.498384 | 4.4:+22638331 | None:intergenic |
| AAAGTCAGATTTGTGCATGC+AGG | 0.502622 | 4.4:+22638780 | None:intergenic |
| TTACCAGACGGGTGAACCTA+TGG | 0.503626 | 4.4:-22638281 | MS.gene32212:CDS |
| GGGTTTATTGCTGTCTCTGA+AGG | 0.505827 | 4.4:-22638433 | MS.gene32212:CDS |
| GAGATAAGGGACAGTCCATT+CGG | 0.509689 | 4.4:-22638061 | MS.gene32212:CDS |
| GCTCCAAAGGCCTCGTCCAT+AGG | 0.509988 | 4.4:+22638265 | None:intergenic |
| GACCTGACATTTGAGTATAT+AGG | 0.511207 | 4.4:-22638187 | MS.gene32212:CDS |
| AATCTACGTGTCAAGATCTC+AGG | 0.511329 | 4.4:+22640869 | None:intergenic |
| TCCTGGGGATCCCTTTGAGG+AGG | 0.517046 | 4.4:-22638482 | MS.gene32212:CDS |
| AACTTGGTTCCTGCAAATTG+GGG | 0.521996 | 4.4:-22640794 | MS.gene32212:CDS |
| AGCAACCCATAAACCAGAAA+GGG | 0.522236 | 4.4:+22638830 | None:intergenic |
| CTTAACTGAACTTGACATAC+AGG | 0.524884 | 4.4:-22639165 | MS.gene32212:CDS |
| ATGAGTCAATGAGGTCACTT+TGG | 0.525296 | 4.4:-22638006 | MS.gene32212:CDS |
| AAACTTGGAAACACTTTCAG+TGG | 0.526917 | 4.4:-22638152 | MS.gene32212:CDS |
| TTGGGCAATGCAATGTGTAC+TGG | 0.527001 | 4.4:-22638110 | MS.gene32212:CDS |
| TTCTGTTGCTGGACCAAGAA+GGG | 0.527558 | 4.4:-22637855 | MS.gene32212:CDS |
| TGTGATGGATTTAGCACTGA+TGG | 0.530648 | 4.4:-22640623 | MS.gene32212:CDS |
| GGAGGTGATGATAGTCAGGC+TGG | 0.533488 | 4.4:-22637896 | MS.gene32212:CDS |
| GAGCCGAAAATGAGTAAAGT+CGG | 0.533812 | 4.4:+22638330 | None:intergenic |
| ATAGGACGTAGTGTAGCTTC+CGG | 0.538684 | 4.4:+22638407 | None:intergenic |
| TTGCTGTCTCTGAAGGATGC+CGG | 0.538728 | 4.4:-22638426 | MS.gene32212:CDS |
| GGTAGAGTGCAAGAGAAAGA+AGG | 0.541481 | 4.4:-22641083 | MS.gene32212:CDS |
| ATAAGAAGTGTTACACTGAA+AGG | 0.544660 | 4.4:-22640839 | MS.gene32212:CDS |
| TGCTGCTGTTGCTACTGTTG+TGG | 0.545043 | 4.4:-22638362 | MS.gene32212:CDS |
| GGTCTTAACAACTGCTCCAA+AGG | 0.546055 | 4.4:+22638252 | None:intergenic |
| ATCATATTGTCCATTGCTTG+AGG | 0.546358 | 4.4:-22638518 | MS.gene32212:CDS |
| CACAGTTGAAGACAAGGGAC+TGG | 0.553399 | 4.4:-22638551 | MS.gene32212:CDS |
| GTAGATTGTTAGCACAAGAA+AGG | 0.553487 | 4.4:-22637952 | MS.gene32212:CDS |
| AATGGTACAACGCTGAAAGA+TGG | 0.557820 | 4.4:-22640934 | MS.gene32212:CDS |
| GTTGAATGTTGAAGTGATGC+AGG | 0.558963 | 4.4:-22637924 | MS.gene32212:CDS |
| GACAAGGGACTGGAAGCTGT+TGG | 0.564143 | 4.4:-22638541 | MS.gene32212:CDS |
| TCTGGTAATCTGGCTGACCA+GGG | 0.566207 | 4.4:+22638296 | None:intergenic |
| CGCTCGAGAAACTTGTCGCT+AGG | 0.566311 | 4.4:-22639031 | MS.gene32212:CDS |
| AAGTCAGATTTGTGCATGCA+GGG | 0.569612 | 4.4:+22638781 | None:intergenic |
| TGAGGAGGGCGCTGCACACG+GGG | 0.570885 | 4.4:-22638467 | MS.gene32212:CDS |
| GGTTAACAAAAGCGTAACAC+TGG | 0.573261 | 4.4:-22638985 | MS.gene32212:CDS |
| AAGCAACCCATAAACCAGAA+AGG | 0.574385 | 4.4:+22638829 | None:intergenic |
| AGCGAACAAGAAGCTTAGAA+AGG | 0.582298 | 4.4:+22638721 | None:intergenic |
| GCTCACAGAGCTGAGGAGCA+CGG | 0.584117 | 4.4:+22638940 | None:intergenic |
| GAACTTGACATACAGGAGAA+TGG | 0.585101 | 4.4:-22639158 | MS.gene32212:CDS |
| AATGAGGTCACTTTGGATGT+CGG | 0.587841 | 4.4:-22637999 | MS.gene32212:CDS |
| ACACGTAGCTCCTCAAGCAA+TGG | 0.587975 | 4.4:+22638508 | None:intergenic |
| CACACGGGGTTACTGAATCA+GGG | 0.590850 | 4.4:-22638453 | MS.gene32212:CDS |
| TGCATGCAGGGTATAGAACT+TGG | 0.591316 | 4.4:+22638793 | None:intergenic |
| GGTCAGCCAGATTACCAGAC+GGG | 0.595288 | 4.4:-22638292 | MS.gene32212:CDS |
| AAAAGTGCGGCATTGCCGAA+TGG | 0.605142 | 4.4:+22638046 | None:intergenic |
| TTGACAAGTATGAGTCAATG+AGG | 0.615233 | 4.4:-22638015 | MS.gene32212:CDS |
| CAGCAGCATTGGTCATCTGA+CGG | 0.617061 | 4.4:+22638377 | None:intergenic |
| GTTGGAACGTGTTCTTGGGA+TGG | 0.625125 | 4.4:-22641002 | MS.gene32212:CDS |
| TATGCTCCTCTTGACAGTGA+AGG | 0.626044 | 4.4:-22638744 | MS.gene32212:CDS |
| GAAAGGCCTTCACTGTCAAG+AGG | 0.633239 | 4.4:+22638738 | None:intergenic |
| GACGGGTGAACCTATGGACG+AGG | 0.637310 | 4.4:-22638275 | MS.gene32212:CDS |
| GTACCAAGCTCACAGAGCTG+AGG | 0.638389 | 4.4:+22638933 | None:intergenic |
| CTGGTAATCTGGCTGACCAG+GGG | 0.645030 | 4.4:+22638297 | None:intergenic |
| GTTCTGTTGCTGGACCAAGA+AGG | 0.646237 | 4.4:-22637856 | MS.gene32212:CDS |
| AGACCTGCACTAAACTCCAA+AGG | 0.647440 | 4.4:-22638234 | MS.gene32212:CDS |
| GCAATGCAATGTGTACTGGT+TGG | 0.650372 | 4.4:-22638106 | MS.gene32212:CDS |
| AATGGCGTTGATGACAAAAG+TGG | 0.653111 | 4.4:-22639140 | MS.gene32212:CDS |
| ATTGGACACAGTTGAAGACA+AGG | 0.658409 | 4.4:-22638557 | MS.gene32212:CDS |
| CAGAGAGTGAGAACAAATGG+AGG | 0.669946 | 4.4:+22637827 | None:intergenic |
| TGGTCAGCCAGATTACCAGA+CGG | 0.670071 | 4.4:-22638293 | MS.gene32212:CDS |
| ACAACGCTGAAAGATGGTCA+AGG | 0.670965 | 4.4:-22640928 | MS.gene32212:CDS |
| GCCGAAAATGAGTAAAGTCG+GGG | 0.679717 | 4.4:+22638332 | None:intergenic |
| ATCACTTCAACATTCAACCT+AGG | 0.683951 | 4.4:+22637929 | None:intergenic |
| GAAGTGATGCAGGAAGAAGG+AGG | 0.684299 | 4.4:-22637914 | MS.gene32212:CDS |
| GTCAAAACCAGACAAAAGTG+CGG | 0.706806 | 4.4:+22638033 | None:intergenic |
| AAGAGAAAGAAGGAATCACA+AGG | 0.713526 | 4.4:-22641073 | MS.gene32212:CDS |
| ACGCTGAAAGATGGTCAAGG+AGG | 0.726925 | 4.4:-22640925 | MS.gene32212:CDS |
| TTGGACACAGTTGAAGACAA+GGG | 0.735277 | 4.4:-22638556 | MS.gene32212:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTATTTATCTAGAATT+AGG | - | chr4.4:22639013-22639032 | MS.gene32212:CDS | 10.0% |
| !! | AACATTTATAAGGATTTAAT+TGG | + | chr4.4:22639439-22639458 | None:intergenic | 15.0% |
| !! | AAGTCACATATATAATTAAT+TGG | + | chr4.4:22639324-22639343 | None:intergenic | 15.0% |
| !! | ATGATCTATATTATTCAAAT+CGG | + | chr4.4:22638711-22638730 | None:intergenic | 15.0% |
| !!! | TTTAAGATAGTTTTAATGAA+AGG | - | chr4.4:22639343-22639362 | MS.gene32212:intron | 15.0% |
| !! | AAGTTTCACTAACATTTATA+AGG | + | chr4.4:22639449-22639468 | None:intergenic | 20.0% |
| !! | AATTATAGTGTGATGTATTA+GGG | - | chr4.4:22639489-22639508 | MS.gene32212:intron | 20.0% |
| !! | CAATTCATTAAAAACTTTGA+AGG | - | chr4.4:22639905-22639924 | MS.gene32212:intron | 20.0% |
| !! | CCAAAACTGAAAAATTAAAT+AGG | + | chr4.4:22638396-22638415 | None:intergenic | 20.0% |
| !! | TAATTATAGTGTGATGTATT+AGG | - | chr4.4:22639488-22639507 | MS.gene32212:intron | 20.0% |
| !!! | CCTATTTAATTTTTCAGTTT+TGG | - | chr4.4:22638393-22638412 | MS.gene32212:CDS | 20.0% |
| !!! | TAATTTTTCAGTTTTGGATT+TGG | - | chr4.4:22638399-22638418 | MS.gene32212:CDS | 20.0% |
| !!! | TATTTGATTTATGATGTGTA+AGG | - | chr4.4:22638432-22638451 | MS.gene32212:CDS | 20.0% |
| !!! | TTTATTTATCTAGAATTAGG+TGG | - | chr4.4:22639016-22639035 | MS.gene32212:CDS | 20.0% |
| !!! | TTTGAAATTAGGAAAAGAAA+AGG | + | chr4.4:22638250-22638269 | None:intergenic | 20.0% |
| !!! | TTTTTATTTCGGCATAAATA+AGG | + | chr4.4:22638956-22638975 | None:intergenic | 20.0% |
| ! | ACTATATAACATCATCCAAA+AGG | + | chr4.4:22638617-22638636 | None:intergenic | 25.0% |
| ! | AGAAAATCTCTACAAAATAG+TGG | + | chr4.4:22639612-22639631 | None:intergenic | 25.0% |
| ! | AGGTGAAAAAAACAATAACA+TGG | - | chr4.4:22637858-22637877 | MS.gene32212:CDS | 25.0% |
| ! | ATCATCTTCTGAATATTACT+TGG | - | chr4.4:22639714-22639733 | MS.gene32212:intron | 25.0% |
| ! | ATTATAGTGTGATGTATTAG+GGG | - | chr4.4:22639490-22639509 | MS.gene32212:intron | 25.0% |
| ! | GAAAATTATCATTCTTGCAA+AGG | + | chr4.4:22639152-22639171 | None:intergenic | 25.0% |
| !! | CTTTTTCTTTTCTTGGATAA+AGG | - | chr4.4:22639109-22639128 | MS.gene32212:CDS | 25.0% |
| !! | TTTTATATTTACTGCTGATG+AGG | - | chr4.4:22638524-22638543 | MS.gene32212:CDS | 25.0% |
| !!! | AGTTTTCGATTGGTTTTTTT+CGG | - | chr4.4:22640287-22640306 | MS.gene32212:intron | 25.0% |
| AAAAGAAAAAGCAGCAAATC+AGG | + | chr4.4:22639100-22639119 | None:intergenic | 30.0% | |
| AAGTTGAAATCAGAAAAACG+AGG | + | chr4.4:22638102-22638121 | None:intergenic | 30.0% | |
| AATGAGTAACATCATCAACT+TGG | + | chr4.4:22638572-22638591 | None:intergenic | 30.0% | |
| ACAGTCAAGAAAACAGAAAA+AGG | + | chr4.4:22638748-22638767 | None:intergenic | 30.0% | |
| ACCTGACATTTGAGTATATA+GGG | - | chr4.4:22640725-22640744 | MS.gene32212:CDS | 30.0% | |
| AGAAAGAAAATCATACCCAA+AGG | + | chr4.4:22640232-22640251 | None:intergenic | 30.0% | |
| AGCAACAAAATGCATCATAA+TGG | + | chr4.4:22639672-22639691 | None:intergenic | 30.0% | |
| AGCACAGACAATTTATACAA+AGG | + | chr4.4:22638686-22638705 | None:intergenic | 30.0% | |
| AGTGTAACACTTCTTATGTT+TGG | + | chr4.4:22638069-22638088 | None:intergenic | 30.0% | |
| ATTTGAGCATCAATTGAGAA+TGG | - | chr4.4:22638915-22638934 | MS.gene32212:CDS | 30.0% | |
| GCACAGACAATTTATACAAA+GGG | + | chr4.4:22638685-22638704 | None:intergenic | 30.0% | |
| GTAGAGAAAATTTACACTTG+TGG | + | chr4.4:22639283-22639302 | None:intergenic | 30.0% | |
| TTAATTGGTATTCAATGCCA+GGG | + | chr4.4:22639424-22639443 | None:intergenic | 30.0% | |
| TTATAGTGTGATGTATTAGG+GGG | - | chr4.4:22639491-22639510 | MS.gene32212:intron | 30.0% | |
| TTTAATTGGTATTCAATGCC+AGG | + | chr4.4:22639425-22639444 | None:intergenic | 30.0% | |
| TTTCATTGGTATGCAAAGAA+TGG | - | chr4.4:22637959-22637978 | MS.gene32212:CDS | 30.0% | |
| TTTGAGCATCAATTGAGAAT+GGG | - | chr4.4:22638916-22638935 | MS.gene32212:CDS | 30.0% | |
| ! | ATCCTTTTCTTGAAGAGTTA+AGG | - | chr4.4:22638181-22638200 | MS.gene32212:CDS | 30.0% |
| ! | TTGATGACAAAAGTGGTAAT+TGG | - | chr4.4:22639778-22639797 | MS.gene32212:intron | 30.0% |
| !! | AGAGAAAGAGCTTTGAAATT+AGG | + | chr4.4:22638261-22638280 | None:intergenic | 30.0% |
| !! | ATAAGAAGTGTTACACTGAA+AGG | - | chr4.4:22638072-22638091 | MS.gene32212:CDS | 30.0% |
| !! | TCGTTTTTCTGATTTCAACT+TGG | - | chr4.4:22638101-22638120 | MS.gene32212:CDS | 30.0% |
| !! | TGATGAAAGTTTGGAGTTTT+TGG | - | chr4.4:22638224-22638243 | MS.gene32212:CDS | 30.0% |
| !!! | AAATTGTTGCTTTTGCCTTT+TGG | - | chr4.4:22638599-22638618 | MS.gene32212:intron | 30.0% |
| !!! | TCGATTTTGAAGTTTTCGAT+TGG | - | chr4.4:22640277-22640296 | MS.gene32212:intron | 30.0% |
| !!! | TTTGCTGCTTTTTCTTTTCT+TGG | - | chr4.4:22639102-22639121 | MS.gene32212:CDS | 30.0% |
| AAACTTGGAAACACTTTCAG+TGG | - | chr4.4:22640759-22640778 | MS.gene32212:CDS | 35.0% | |
| AAGAGAAAGAAGGAATCACA+AGG | - | chr4.4:22637838-22637857 | MS.gene32212:CDS | 35.0% | |
| AGAGTTAAGGCTTAAGAGAA+TGG | - | chr4.4:22638194-22638213 | MS.gene32212:CDS | 35.0% | |
| AGCCTTAACTCTTCAAGAAA+AGG | + | chr4.4:22638186-22638205 | None:intergenic | 35.0% | |
| ATCAATTGAGAATGGGAACA+AGG | - | chr4.4:22638923-22638942 | MS.gene32212:CDS | 35.0% | |
| ATCACTTCAACATTCAACCT+AGG | + | chr4.4:22640985-22641004 | None:intergenic | 35.0% | |
| ATCATATTGTCCATTGCTTG+AGG | - | chr4.4:22640393-22640412 | MS.gene32212:intron | 35.0% | |
| ATTCACAAACATCTCACCAA+TGG | + | chr4.4:22638816-22638835 | None:intergenic | 35.0% | |
| CCAATGATGTAAAGCTTTCT+GGG | + | chr4.4:22639815-22639834 | None:intergenic | 35.0% | |
| CGAAGTTTACATCATTGCTT+AGG | + | chr4.4:22639857-22639876 | None:intergenic | 35.0% | |
| CTTAACTGAACTTGACATAC+AGG | - | chr4.4:22639746-22639765 | MS.gene32212:intron | 35.0% | |
| GACCTGACATTTGAGTATAT+AGG | - | chr4.4:22640724-22640743 | MS.gene32212:CDS | 35.0% | |
| GTAGATTGTTAGCACAAGAA+AGG | - | chr4.4:22640959-22640978 | MS.gene32212:CDS | 35.0% | |
| GTTTACATCATTGCTTAGGT+TGG | + | chr4.4:22639853-22639872 | None:intergenic | 35.0% | |
| TATGTTTATCGTTCTGTTGC+TGG | - | chr4.4:22641045-22641064 | MS.gene32212:CDS | 35.0% | |
| TCCAATGATGTAAAGCTTTC+TGG | + | chr4.4:22639816-22639835 | None:intergenic | 35.0% | |
| TCCCTATATACTCAAATGTC+AGG | + | chr4.4:22640729-22640748 | None:intergenic | 35.0% | |
| TCTGAATATTACTTGGATGC+AGG | - | chr4.4:22639721-22639740 | MS.gene32212:intron | 35.0% | |
| TGCTGATATTCATTCATGGT+TGG | - | chr4.4:22638140-22638159 | MS.gene32212:CDS | 35.0% | |
| TGTGTAAAAAATCTTTGCCC+TGG | - | chr4.4:22639404-22639423 | MS.gene32212:intron | 35.0% | |
| TTCACAAACATCTCACCAAT+GGG | + | chr4.4:22638815-22638834 | None:intergenic | 35.0% | |
| TTGACAAGTATGAGTCAATG+AGG | - | chr4.4:22640896-22640915 | MS.gene32212:CDS | 35.0% | |
| TTTGTGAATTATGTTGCCAG+TGG | - | chr4.4:22638827-22638846 | MS.gene32212:CDS | 35.0% | |
| ! | AGATTTTCCAGATGAAGTGT+TGG | - | chr4.4:22637891-22637910 | MS.gene32212:CDS | 35.0% |
| ! | AGGGAAGTATGCTAAAAACT+TGG | - | chr4.4:22640744-22640763 | MS.gene32212:CDS | 35.0% |
| ! | CTCTCAAAATCACAGTTTTG+TGG | + | chr4.4:22638866-22638885 | None:intergenic | 35.0% |
| ! | TCAAGGAGGAATGTTTTCAT+AGG | - | chr4.4:22638000-22638019 | MS.gene32212:CDS | 35.0% |
| ! | TTTCTGTTTTCTTGACTGTC+TGG | - | chr4.4:22638749-22638768 | MS.gene32212:CDS | 35.0% |
| !!! | CTTTCTCTTTTGAGTTGTGA+TGG | - | chr4.4:22638273-22638292 | MS.gene32212:CDS | 35.0% |
| AAAAACAGAAGCTACGACGT+AGG | - | chr4.4:22638980-22638999 | MS.gene32212:CDS | 40.0% | |
| AAAACAGAAGCTACGACGTA+GGG | - | chr4.4:22638981-22639000 | MS.gene32212:CDS | 40.0% | |
| AAAGTCAGATTTGTGCATGC+AGG | + | chr4.4:22640134-22640153 | None:intergenic | 40.0% | |
| AACTTGGTTCCTGCAAATTG+GGG | - | chr4.4:22638117-22638136 | MS.gene32212:CDS | 40.0% | |
| AAGCAACCCATAAACCAGAA+AGG | + | chr4.4:22640085-22640104 | None:intergenic | 40.0% | |
| AAGTCAGATTTGTGCATGCA+GGG | + | chr4.4:22640133-22640152 | None:intergenic | 40.0% | |
| AATCTACGTGTCAAGATCTC+AGG | + | chr4.4:22638045-22638064 | None:intergenic | 40.0% | |
| AATGGTACAACGCTGAAAGA+TGG | - | chr4.4:22637977-22637996 | MS.gene32212:CDS | 40.0% | |
| AGACAGAAGCTCAGTTTCAT+TGG | - | chr4.4:22637945-22637964 | MS.gene32212:CDS | 40.0% | |
| AGCAACCCATAAACCAGAAA+GGG | + | chr4.4:22640084-22640103 | None:intergenic | 40.0% | |
| AGCCGAAAATGAGTAAAGTC+GGG | + | chr4.4:22640583-22640602 | None:intergenic | 40.0% | |
| AGCGAACAAGAAGCTTAGAA+AGG | + | chr4.4:22640193-22640212 | None:intergenic | 40.0% | |
| AGCTGCGAAAACTTGAGATA+AGG | - | chr4.4:22640836-22640855 | MS.gene32212:CDS | 40.0% | |
| ATGAGTCAATGAGGTCACTT+TGG | - | chr4.4:22640905-22640924 | MS.gene32212:CDS | 40.0% | |
| ATTGGACACAGTTGAAGACA+AGG | - | chr4.4:22640354-22640373 | MS.gene32212:intron | 40.0% | |
| CAACTTGGTTCCTGCAAATT+GGG | - | chr4.4:22638116-22638135 | MS.gene32212:CDS | 40.0% | |
| CATCTACCTTATGCAGGTAT+TGG | - | chr4.4:22640336-22640355 | MS.gene32212:intron | 40.0% | |
| CATCTGAACACAGTACTTGA+AGG | + | chr4.4:22639519-22639538 | None:intergenic | 40.0% | |
| CCCAGAAAGCTTTACATCAT+TGG | - | chr4.4:22639812-22639831 | MS.gene32212:intron | 40.0% | |
| GAACTTGACATACAGGAGAA+TGG | - | chr4.4:22639753-22639772 | MS.gene32212:intron | 40.0% | |
| GAGCCGAAAATGAGTAAAGT+CGG | + | chr4.4:22640584-22640603 | None:intergenic | 40.0% | |
| GCTGCGAAAACTTGAGATAA+GGG | - | chr4.4:22640837-22640856 | MS.gene32212:CDS | 40.0% | |
| GGCTGTTAGTGATGAAAGTT+TGG | - | chr4.4:22638215-22638234 | MS.gene32212:CDS | 40.0% | |
| GTCAAAACCAGACAAAAGTG+CGG | + | chr4.4:22640881-22640900 | None:intergenic | 40.0% | |
| GTTGAATGTTGAAGTGATGC+AGG | - | chr4.4:22640987-22641006 | MS.gene32212:CDS | 40.0% | |
| TCAACTTGGTTCCTGCAAAT+TGG | - | chr4.4:22638115-22638134 | MS.gene32212:CDS | 40.0% | |
| TCGAATACACTTTCGTTAGC+AGG | + | chr4.4:22640315-22640334 | None:intergenic | 40.0% | |
| TTCGAACATCTACCTTATGC+AGG | - | chr4.4:22640330-22640349 | MS.gene32212:intron | 40.0% | |
| TTGGACACAGTTGAAGACAA+GGG | - | chr4.4:22640355-22640374 | MS.gene32212:intron | 40.0% | |
| ! | AATGAGGTCACTTTGGATGT+CGG | - | chr4.4:22640912-22640931 | MS.gene32212:CDS | 40.0% |
| ! | ATCTCAAGTTTTCGCAGCTT+CGG | + | chr4.4:22640835-22640854 | None:intergenic | 40.0% |
| ! | GGTTAACAAAAGCGTAACAC+TGG | - | chr4.4:22639926-22639945 | MS.gene32212:intron | 40.0% |
| ! | TCATCTGACGGCAAAAGTAT+AGG | + | chr4.4:22640525-22640544 | None:intergenic | 40.0% |
| ! | TCATTTTCACAAGAGCTGAC+AGG | - | chr4.4:22640005-22640024 | MS.gene32212:intron | 40.0% |
| ! | TTTTGCTGGAAGCAGTGATT+GGG | - | chr4.4:22640783-22640802 | MS.gene32212:CDS | 40.0% |
| !! | AAGTGTTGGAACGTGTTCTT+GGG | - | chr4.4:22637905-22637924 | MS.gene32212:CDS | 40.0% |
| !! | AATGGCGTTGATGACAAAAG+TGG | - | chr4.4:22639771-22639790 | MS.gene32212:intron | 40.0% |
| !! | TCACACCCTTTCTGGTTTAT+GGG | - | chr4.4:22640076-22640095 | MS.gene32212:intron | 40.0% |
| !! | TGTGATGGATTTAGCACTGA+TGG | - | chr4.4:22638288-22638307 | MS.gene32212:CDS | 40.0% |
| !! | TTCACACCCTTTCTGGTTTA+TGG | - | chr4.4:22640075-22640094 | MS.gene32212:intron | 40.0% |
| !! | TTCTGGTTTATGGGTTGCTT+CGG | - | chr4.4:22640085-22640104 | MS.gene32212:intron | 40.0% |
| AACAGTAGCAACAGCAGCAT+TGG | + | chr4.4:22640548-22640567 | None:intergenic | 45.0% | |
| ACAACGCTGAAAGATGGTCA+AGG | - | chr4.4:22637983-22638002 | MS.gene32212:CDS | 45.0% | |
| ACACGTTCCAACACTTCATC+TGG | + | chr4.4:22637901-22637920 | None:intergenic | 45.0% | |
| AGAAGGAGGTGATGATAGTC+AGG | - | chr4.4:22641011-22641030 | MS.gene32212:CDS | 45.0% | |
| AGAAGTCTTCACACCCTTTC+TGG | - | chr4.4:22640068-22640087 | MS.gene32212:intron | 45.0% | |
| AGACCTGCACTAAACTCCAA+AGG | - | chr4.4:22640677-22640696 | MS.gene32212:CDS | 45.0% | |
| AGCCAACTCTATCCTCATTC+TGG | + | chr4.4:22639058-22639077 | None:intergenic | 45.0% | |
| ATAGGACGTAGTGTAGCTTC+CGG | + | chr4.4:22640507-22640526 | None:intergenic | 45.0% | |
| ATATCAGCACCCCAATTTGC+AGG | + | chr4.4:22638129-22638148 | None:intergenic | 45.0% | |
| ATCCTCATTCTGGACTGCTA+AGG | + | chr4.4:22639048-22639067 | None:intergenic | 45.0% | |
| CAGAGAGTGAGAACAAATGG+AGG | + | chr4.4:22641087-22641106 | None:intergenic | 45.0% | |
| CTGTGTCCAATACCTGCATA+AGG | + | chr4.4:22640345-22640364 | None:intergenic | 45.0% | |
| GACTGCAAAGTGACGATGAA+TGG | - | chr4.4:22640934-22640953 | MS.gene32212:CDS | 45.0% | |
| GAGATAAGGGACAGTCCATT+CGG | - | chr4.4:22640850-22640869 | MS.gene32212:CDS | 45.0% | |
| GCCGAAAATGAGTAAAGTCG+GGG | + | chr4.4:22640582-22640601 | None:intergenic | 45.0% | |
| GGGTTTATTGCTGTCTCTGA+AGG | - | chr4.4:22640478-22640497 | MS.gene32212:intron | 45.0% | |
| GGTAGAGTGCAAGAGAAAGA+AGG | - | chr4.4:22637828-22637847 | MS.gene32212:CDS | 45.0% | |
| GGTCTTAACAACTGCTCCAA+AGG | + | chr4.4:22640662-22640681 | None:intergenic | 45.0% | |
| GTCCAGAATGAGGATAGAGT+TGG | - | chr4.4:22639053-22639072 | MS.gene32212:CDS | 45.0% | |
| GTTGAAGTGATGCAGGAAGA+AGG | - | chr4.4:22640994-22641013 | MS.gene32212:CDS | 45.0% | |
| TACCTTAGCAGTCCAGAATG+AGG | - | chr4.4:22639043-22639062 | MS.gene32212:CDS | 45.0% | |
| TATGCTCCTCTTGACAGTGA+AGG | - | chr4.4:22640167-22640186 | MS.gene32212:intron | 45.0% | |
| TCCTAATCTTCGACGCCTTT+GGG | - | chr4.4:22640214-22640233 | MS.gene32212:intron | 45.0% | |
| TGCATGCAGGGTATAGAACT+TGG | + | chr4.4:22640121-22640140 | None:intergenic | 45.0% | |
| TGGTCAGATTCTGTTTCCAC+TGG | + | chr4.4:22638846-22638865 | None:intergenic | 45.0% | |
| TGTTAGCACAAGAAAGGCCT+AGG | - | chr4.4:22640965-22640984 | MS.gene32212:CDS | 45.0% | |
| TTCTGTTGCTGGACCAAGAA+GGG | - | chr4.4:22641056-22641075 | MS.gene32212:CDS | 45.0% | |
| TTGGGCAATGCAATGTGTAC+TGG | - | chr4.4:22640801-22640820 | MS.gene32212:CDS | 45.0% | |
| ! | ACACTTTCAGTGGCTTTTGC+TGG | - | chr4.4:22640769-22640788 | MS.gene32212:CDS | 45.0% |
| ! | AGGAGCTACGTGTTTTTCCT+GGG | - | chr4.4:22640413-22640432 | MS.gene32212:intron | 45.0% |
| ! | CTTTTGCTGGAAGCAGTGAT+TGG | - | chr4.4:22640782-22640801 | MS.gene32212:CDS | 45.0% |
| ! | GCAATGCAATGTGTACTGGT+TGG | - | chr4.4:22640805-22640824 | MS.gene32212:CDS | 45.0% |
| ! | GCATCGATGCAATTTCCCAT+TGG | - | chr4.4:22638797-22638816 | MS.gene32212:CDS | 45.0% |
| ! | GCCCCGACTTTACTCATTTT+CGG | - | chr4.4:22640578-22640597 | MS.gene32212:intron | 45.0% |
| !! | AAGCCTTTGGAGTTTAGTGC+AGG | + | chr4.4:22640683-22640702 | None:intergenic | 45.0% |
| !! | GAAGTGTTGGAACGTGTTCT+TGG | - | chr4.4:22637904-22637923 | MS.gene32212:CDS | 45.0% |
| !! | GGGGTGCTGATATTCATTCA+TGG | - | chr4.4:22638136-22638155 | MS.gene32212:CDS | 45.0% |
| !! | TGGATTTAGCACTGATGGCT+TGG | - | chr4.4:22638293-22638312 | MS.gene32212:CDS | 45.0% |
| !!! | TGTTTTTTTTTTTTTTATTT+CGG | + | chr4.4:22638967-22638986 | None:intergenic | 5.0% |
| AACCTGACACAGCAAGCCTT+TGG | + | chr4.4:22640696-22640715 | None:intergenic | 50.0% | |
| ACACGTAGCTCCTCAAGCAA+TGG | + | chr4.4:22640406-22640425 | None:intergenic | 50.0% | |
| ACGCTGAAAGATGGTCAAGG+AGG | - | chr4.4:22637986-22638005 | MS.gene32212:CDS | 50.0% | |
| CACACGGGGTTACTGAATCA+GGG | - | chr4.4:22640458-22640477 | MS.gene32212:intron | 50.0% | |
| CACAGTTGAAGACAAGGGAC+TGG | - | chr4.4:22640360-22640379 | MS.gene32212:intron | 50.0% | |
| CGATGCACGACACGTTCAAA+TGG | + | chr4.4:22638783-22638802 | None:intergenic | 50.0% | |
| GAAAGGCCTTCACTGTCAAG+AGG | + | chr4.4:22640176-22640195 | None:intergenic | 50.0% | |
| GAAGTGATGCAGGAAGAAGG+AGG | - | chr4.4:22640997-22641016 | MS.gene32212:CDS | 50.0% | |
| GTCCTAATCTTCGACGCCTT+TGG | - | chr4.4:22640213-22640232 | MS.gene32212:intron | 50.0% | |
| GTTCTGTTGCTGGACCAAGA+AGG | - | chr4.4:22641055-22641074 | MS.gene32212:CDS | 50.0% | |
| GTTGGAACGTGTTCTTGGGA+TGG | - | chr4.4:22637909-22637928 | MS.gene32212:CDS | 50.0% | |
| TCTGGTAATCTGGCTGACCA+GGG | + | chr4.4:22640618-22640637 | None:intergenic | 50.0% | |
| TGCTGCTGTTGCTACTGTTG+TGG | - | chr4.4:22640549-22640568 | MS.gene32212:intron | 50.0% | |
| TGGTCAGCCAGATTACCAGA+CGG | - | chr4.4:22640618-22640637 | MS.gene32212:CDS | 50.0% | |
| TTACCAGACGGGTGAACCTA+TGG | - | chr4.4:22640630-22640649 | MS.gene32212:CDS | 50.0% | |
| ! | AAAAGTGCGGCATTGCCGAA+TGG | + | chr4.4:22640868-22640887 | None:intergenic | 50.0% |
| ! | AATGGAGGTGCATCCCTTCT+TGG | + | chr4.4:22641072-22641091 | None:intergenic | 50.0% |
| ! | GAGGAGCTACGTGTTTTTCC+TGG | - | chr4.4:22640412-22640431 | MS.gene32212:intron | 50.0% |
| ! | GGAGCTACGTGTTTTTCCTG+GGG | - | chr4.4:22640414-22640433 | MS.gene32212:intron | 50.0% |
| ! | TTGCTGTCTCTGAAGGATGC+CGG | - | chr4.4:22640485-22640504 | MS.gene32212:intron | 50.0% |
| ! | TTTTCCTGGGGATCCCTTTG+AGG | - | chr4.4:22640426-22640445 | MS.gene32212:intron | 50.0% |
| !! | ACCCAAAGGCGTCGAAGATT+AGG | + | chr4.4:22640218-22640237 | None:intergenic | 50.0% |
| !! | CAGCAGCATTGGTCATCTGA+CGG | + | chr4.4:22640537-22640556 | None:intergenic | 50.0% |
| CAGCTCTGTGAGCTTGGTAC+TGG | - | chr4.4:22639981-22640000 | MS.gene32212:intron | 55.0% | |
| CGCTCGAGAAACTTGTCGCT+AGG | - | chr4.4:22639880-22639899 | MS.gene32212:intron | 55.0% | |
| CTGGTAATCTGGCTGACCAG+GGG | + | chr4.4:22640617-22640636 | None:intergenic | 55.0% | |
| GAACCTATGGACGAGGCCTT+TGG | - | chr4.4:22640643-22640662 | MS.gene32212:CDS | 55.0% | |
| GACAAGGGACTGGAAGCTGT+TGG | - | chr4.4:22640370-22640389 | MS.gene32212:intron | 55.0% | |
| GCACACGGGGTTACTGAATC+AGG | - | chr4.4:22640457-22640476 | MS.gene32212:intron | 55.0% | |
| GGAGGTGATGATAGTCAGGC+TGG | - | chr4.4:22641015-22641034 | MS.gene32212:CDS | 55.0% | |
| GGTCAGCCAGATTACCAGAC+GGG | - | chr4.4:22640619-22640638 | MS.gene32212:CDS | 55.0% | |
| GGTTCACCCGTCTGGTAATC+TGG | + | chr4.4:22640628-22640647 | None:intergenic | 55.0% | |
| GTACCAAGCTCACAGAGCTG+AGG | + | chr4.4:22639981-22640000 | None:intergenic | 55.0% | |
| GTCTGGTAATCTGGCTGACC+AGG | + | chr4.4:22640619-22640638 | None:intergenic | 55.0% | |
| ! | GGCAATGCCGCACTTTTGTC+TGG | - | chr4.4:22640871-22640890 | MS.gene32212:CDS | 55.0% |
| !! | CTCCAAAGGCTTGCTGTGTC+AGG | - | chr4.4:22640691-22640710 | MS.gene32212:CDS | 55.0% |
| CGTCCATAGGTTCACCCGTC+TGG | + | chr4.4:22640636-22640655 | None:intergenic | 60.0% | |
| GACGGGTGAACCTATGGACG+AGG | - | chr4.4:22640636-22640655 | MS.gene32212:CDS | 60.0% | |
| GCTCACAGAGCTGAGGAGCA+CGG | + | chr4.4:22639974-22639993 | None:intergenic | 60.0% | |
| GCTCCAAAGGCCTCGTCCAT+AGG | + | chr4.4:22640649-22640668 | None:intergenic | 60.0% | |
| GCTCCTCAGCTCTGTGAGCT+TGG | - | chr4.4:22639975-22639994 | MS.gene32212:intron | 60.0% | |
| TGTGCAGCGCCCTCCTCAAA+GGG | + | chr4.4:22640442-22640461 | None:intergenic | 60.0% | |
| ! | CCTGGGGATCCCTTTGAGGA+GGG | - | chr4.4:22640430-22640449 | MS.gene32212:intron | 60.0% |
| ! | TCCTGGGGATCCCTTTGAGG+AGG | - | chr4.4:22640429-22640448 | MS.gene32212:intron | 60.0% |
| !! | TTTGAGGAGGGCGCTGCACA+CGG | - | chr4.4:22640442-22640461 | MS.gene32212:intron | 60.0% |
| CCCTCCTCAAAGGGATCCCC+AGG | + | chr4.4:22640433-22640452 | None:intergenic | 65.0% | |
| CGGCTCTGCATCATGACCCC+TGG | - | chr4.4:22640598-22640617 | MS.gene32212:CDS | 65.0% | |
| GTGTGCAGCGCCCTCCTCAA+AGG | + | chr4.4:22640443-22640462 | None:intergenic | 65.0% | |
| !! | TTGAGGAGGGCGCTGCACAC+GGG | - | chr4.4:22640443-22640462 | MS.gene32212:intron | 65.0% |
| !! | TGAGGAGGGCGCTGCACACG+GGG | - | chr4.4:22640444-22640463 | MS.gene32212:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 22637826 | 22641107 | 22637826 | ID=MS.gene32212 |
| chr4.4 | mRNA | 22637826 | 22641107 | 22637826 | ID=MS.gene32212.t1;Parent=MS.gene32212 |
| chr4.4 | exon | 22640596 | 22641107 | 22640596 | ID=MS.gene32212.t1.exon1;Parent=MS.gene32212.t1 |
| chr4.4 | CDS | 22640596 | 22641107 | 22640596 | ID=cds.MS.gene32212.t1;Parent=MS.gene32212.t1 |
| chr4.4 | exon | 22638698 | 22639190 | 22638698 | ID=MS.gene32212.t1.exon2;Parent=MS.gene32212.t1 |
| chr4.4 | CDS | 22638698 | 22639190 | 22638698 | ID=cds.MS.gene32212.t1;Parent=MS.gene32212.t1 |
| chr4.4 | exon | 22637826 | 22638581 | 22637826 | ID=MS.gene32212.t1.exon3;Parent=MS.gene32212.t1 |
| chr4.4 | CDS | 22637826 | 22638581 | 22637826 | ID=cds.MS.gene32212.t1;Parent=MS.gene32212.t1 |
| Gene Sequence |
| Protein sequence |
