Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32244.t1 | XP_003628441.2 | 92.9 | 980 | 60 | 3 | 6 | 977 | 3 | 980 | 0.00E+00 | 1735.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32244.t1 | G7LBX4 | 92.9 | 980 | 60 | 3 | 6 | 977 | 3 | 980 | 0.0e+00 | 1735.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050297 | MS.gene32244 | 0.817054 | 4.02E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32244.t1 | MTR_8g058270 | 93.163 | 980 | 57 | 3 | 6 | 977 | 3 | 980 | 0.0 | 1841 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32244.t1 | AT5G52950 | 36.739 | 1018 | 491 | 39 | 14 | 956 | 7 | 946 | 8.04e-143 | 450 |
MS.gene32244.t1 | AT5G52950 | 34.656 | 756 | 386 | 23 | 14 | 717 | 7 | 706 | 7.72e-88 | 297 |
Find 222 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACACTCGGCTTCTGATTT+TGG | 0.068118 | 8.3:-48280552 | MS.gene32244:CDS |
CGATGAGATTTGCGGCTTTC+GGG | 0.120490 | 8.3:+48281543 | None:intergenic |
AAACCACGAAACTCCGATTT+TGG | 0.120518 | 8.3:+48281109 | None:intergenic |
TCAATTGACTCTTGAGATTT+TGG | 0.125367 | 8.3:-48281054 | MS.gene32244:CDS |
CTTCGAAAGGTGATCTTTCT+TGG | 0.174348 | 8.3:+48278736 | None:intergenic |
TTTGACAAACTTCTGTTTAC+TGG | 0.180166 | 8.3:+48279534 | None:intergenic |
TTTCTGTTCGTTGTTGTTCT+AGG | 0.195874 | 8.3:-48281088 | MS.gene32244:CDS |
CAAGGGTGCTGTGGGAATTA+AGG | 0.206701 | 8.3:-48280439 | MS.gene32244:CDS |
TGAGATTGGGACTAGGAAAT+TGG | 0.214715 | 8.3:-48281201 | MS.gene32244:CDS |
GATTTCATACCCTTCTGTTT+TGG | 0.218761 | 8.3:+48278758 | None:intergenic |
TCGATGAGATTTGCGGCTTT+CGG | 0.221153 | 8.3:+48281542 | None:intergenic |
GGTTCTGCTCTTGTTCCTTT+TGG | 0.225270 | 8.3:-48281143 | MS.gene32244:CDS |
CGGAAAGGTGGATAGGGTTT+TGG | 0.243521 | 8.3:+48281586 | None:intergenic |
ATTAGTAAAAGAACTGTTAA+AGG | 0.257556 | 8.3:-48279851 | MS.gene32244:CDS |
CAGTCGGAGGTTTAGGTCTA+AGG | 0.261696 | 8.3:-48281303 | MS.gene32244:CDS |
TCGGTGTCGGCGTCGGAATT+AGG | 0.263416 | 8.3:+48281482 | None:intergenic |
GAGATGCTAGCAACTGAATT+TGG | 0.280223 | 8.3:-48280747 | MS.gene32244:CDS |
AGTTGCTAAGGCATTGTTTC+AGG | 0.282962 | 8.3:-48278519 | MS.gene32244:CDS |
GAATGCCTGCTTTGCGAGTT+TGG | 0.283433 | 8.3:-48278784 | MS.gene32244:CDS |
TTGTTAATTCATCTATTTAC+TGG | 0.283516 | 8.3:-48279969 | MS.gene32244:CDS |
TTGTTGTGATCTTCAAGTTT+TGG | 0.298264 | 8.3:-48281003 | MS.gene32244:CDS |
AATTCATTTAATTCTCTTGC+AGG | 0.302417 | 8.3:-48281404 | MS.gene32244:CDS |
CCTTCTGCAAATATCTGATT+TGG | 0.304133 | 8.3:+48280198 | None:intergenic |
TCGAAGGAGAAAGAGTGTTT+AGG | 0.304410 | 8.3:+48281638 | None:intergenic |
GCAAATATCTGATTTGGCTT+GGG | 0.314154 | 8.3:+48280204 | None:intergenic |
TTGCCTCTCTGATTCGGTTC+TGG | 0.323665 | 8.3:-48280835 | MS.gene32244:CDS |
GGAATGTCAGTCGGAGGTTT+AGG | 0.327136 | 8.3:-48281310 | MS.gene32244:CDS |
GCGAAAATCTGTTCCCGTTT+GGG | 0.329348 | 8.3:-48280712 | MS.gene32244:CDS |
GACCGTGTGCTTCTTGTCAT+TGG | 0.329994 | 8.3:+48278608 | None:intergenic |
TGCTGAGGTTGCAACGAAAA+AGG | 0.330612 | 8.3:-48280097 | MS.gene32244:CDS |
AAAGTGGAGGGAAAGAAAAT+AGG | 0.331106 | 8.3:+48281741 | None:intergenic |
CGAAGGAGAAAGAGTGTTTA+GGG | 0.331515 | 8.3:+48281639 | None:intergenic |
TGCAAATATCTGATTTGGCT+TGG | 0.333080 | 8.3:+48280203 | None:intergenic |
TGCTTTGCAGCTATGTCCTT+GGG | 0.334093 | 8.3:+48279826 | None:intergenic |
CATGGATTTGGTGGATTCTC+AGG | 0.335829 | 8.3:-48280463 | MS.gene32244:CDS |
TCATAAAATCTACAACAAAA+TGG | 0.336080 | 8.3:-48279044 | MS.gene32244:CDS |
AATGCCTGCTTTGCGAGTTT+GGG | 0.336980 | 8.3:-48278783 | MS.gene32244:CDS |
ATTTCACAAGAACATGGATT+TGG | 0.340682 | 8.3:-48280475 | MS.gene32244:CDS |
ACCTTTCGAAGATTCCAAAA+AGG | 0.351163 | 8.3:-48278724 | MS.gene32244:CDS |
GGCGAAAATCTGTTCCCGTT+TGG | 0.355166 | 8.3:-48280713 | MS.gene32244:CDS |
ATCTTTATAGAGAAGATTGC+TGG | 0.357617 | 8.3:-48280674 | MS.gene32244:CDS |
TTTAAAATGCTGGATGAAAC+AGG | 0.359064 | 8.3:-48280268 | MS.gene32244:CDS |
GACCGTGTGTTTCTTGTCAT+TGG | 0.366056 | 8.3:+48278659 | None:intergenic |
GAGATTGGGACTAGGAAATT+GGG | 0.366553 | 8.3:-48281200 | MS.gene32244:CDS |
CTAAGGGTGTTCATTGTAGT+TGG | 0.366811 | 8.3:-48281286 | MS.gene32244:CDS |
ATGCTTTGCAGCTATGTCCT+TGG | 0.370627 | 8.3:+48279825 | None:intergenic |
TGGGACTAGGAAATTGGGTT+GGG | 0.384135 | 8.3:-48281195 | MS.gene32244:CDS |
TAGAGAAGATTGCTGGGCTT+TGG | 0.384846 | 8.3:-48280667 | MS.gene32244:CDS |
CCTATTAAAAGAATTCATAT+TGG | 0.390807 | 8.3:+48280524 | None:intergenic |
AGCAACTGAATTTGGCTGTC+AGG | 0.391010 | 8.3:-48280739 | MS.gene32244:CDS |
CGCTGTTAAATAAACAATCC+TGG | 0.391161 | 8.3:+48278990 | None:intergenic |
CCACAGGTGGTTGTGTCAGC+TGG | 0.395042 | 8.3:-48280126 | MS.gene32244:CDS |
GGCTATGTCAGAAGGTTGAT+AGG | 0.401561 | 8.3:-48279948 | MS.gene32244:CDS |
TTGAACGAGTTACCTCAAAA+TGG | 0.402053 | 8.3:-48280162 | MS.gene32244:CDS |
AAGTGGAGGGAAAGAAAATA+GGG | 0.402505 | 8.3:+48281742 | None:intergenic |
GTAAACAAGAGAATTAAATT+AGG | 0.404827 | 8.3:+48281437 | None:intergenic |
TACGTGGGTTGTTTGAGATT+GGG | 0.405017 | 8.3:-48281214 | MS.gene32244:CDS |
AAAGAGTGTTTAGGGAGAAA+AGG | 0.405219 | 8.3:+48281647 | None:intergenic |
TCTTTCGAACAGGATTCAAC+AGG | 0.413600 | 8.3:-48280037 | MS.gene32244:CDS |
GGTTTGATATATCCCAAAAT+CGG | 0.415160 | 8.3:-48281122 | MS.gene32244:CDS |
GAAGTATTGCCTCTCTGATT+CGG | 0.415432 | 8.3:-48280841 | MS.gene32244:CDS |
ATACGTGGGTTGTTTGAGAT+TGG | 0.416885 | 8.3:-48281215 | MS.gene32244:CDS |
CGGTCAAGCCCGCAGTCAAT+AGG | 0.418193 | 8.3:-48278590 | MS.gene32244:CDS |
GAATGTATGAAGGTAGATTC+AGG | 0.421746 | 8.3:-48280795 | MS.gene32244:CDS |
TTGTTGTTCTAGGGAAGTTA+AGG | 0.427135 | 8.3:-48281078 | MS.gene32244:CDS |
TCACAACAATTGTACTCAAT+AGG | 0.429558 | 8.3:+48281017 | None:intergenic |
CATTTGCAGAAGAATGTAAG+AGG | 0.431045 | 8.3:-48278869 | MS.gene32244:CDS |
AAGGGTGCTGTGGGAATTAA+GGG | 0.431550 | 8.3:-48280438 | MS.gene32244:CDS |
CGAGGACAGCAGCAAATCAT+TGG | 0.433001 | 8.3:-48278969 | MS.gene32244:CDS |
AGCTTCTTCATGATTACCCC+TGG | 0.442582 | 8.3:-48281508 | MS.gene32244:CDS |
AGAGCCGAAGAAACGGTAAA+AGG | 0.443658 | 8.3:+48280594 | None:intergenic |
GGCGTCGGAATTAGGTTCCC+AGG | 0.446140 | 8.3:+48281490 | None:intergenic |
TATTATCTTTCAGAGGAGAA+TGG | 0.446387 | 8.3:+48279902 | None:intergenic |
CTCAACAACATCTCCCAAAC+GGG | 0.448144 | 8.3:+48280699 | None:intergenic |
AGTCATAGACCTCGTAGCTT+TGG | 0.448648 | 8.3:-48280001 | MS.gene32244:CDS |
TTCTGTTCGTTGTTGTTCTA+GGG | 0.450145 | 8.3:-48281087 | MS.gene32244:CDS |
ACATTCTTCTGCAAATGAAA+AGG | 0.450632 | 8.3:+48278875 | None:intergenic |
CTTTCAGAGGAGAATGGACC+TGG | 0.451514 | 8.3:+48279908 | None:intergenic |
TTTGGAGAGGAGATTGAAAG+TGG | 0.451773 | 8.3:+48281604 | None:intergenic |
GTGTGGGAGTAACGTATCAT+TGG | 0.455687 | 8.3:+48281860 | None:intergenic |
TTTGGTGGATTCTCAGGTCA+AGG | 0.468267 | 8.3:-48280457 | MS.gene32244:CDS |
TCTGCTTCTGTTTGTAAATG+AGG | 0.468775 | 8.3:-48279020 | MS.gene32244:CDS |
TGTTGTGAAGGAGGAGGAGT+GGG | 0.470230 | 8.3:+48281807 | None:intergenic |
GGTGTTCATTGTAGTTGGAT+TGG | 0.471438 | 8.3:-48281281 | MS.gene32244:CDS |
TGATATGAAAGAGGGAAATT+CGG | 0.473474 | 8.3:+48281566 | None:intergenic |
GCGAAAAGAGAGGTTGAAAG+TGG | 0.478832 | 8.3:+48281725 | None:intergenic |
TTGGGATATATCAAACCAAA+AGG | 0.480635 | 8.3:+48281128 | None:intergenic |
AGGAGATTGAAAGTGGAGAA+AGG | 0.481724 | 8.3:+48281611 | None:intergenic |
ATCATATACCAAATCACAAA+AGG | 0.483932 | 8.3:+48280359 | None:intergenic |
AGAAGTTGTGGCGTCGGTGT+CGG | 0.485832 | 8.3:+48281469 | None:intergenic |
GGAAATTCGGAAAGGTGGAT+AGG | 0.491520 | 8.3:+48281579 | None:intergenic |
GTGTTGTGAAGGAGGAGGAG+TGG | 0.492896 | 8.3:+48281806 | None:intergenic |
TGTTGGTGGTGTTGTGAAGG+AGG | 0.494572 | 8.3:+48281798 | None:intergenic |
TTTACAAGGTGGTGGAAGGA+AGG | 0.495046 | 8.3:-48280946 | MS.gene32244:CDS |
TGTTCGGTGATTATAGTAGT+TGG | 0.496366 | 8.3:+48279760 | None:intergenic |
AAAGAGAGGTTGAAAGTGGA+GGG | 0.496489 | 8.3:+48281729 | None:intergenic |
TTGGGACTAGGAAATTGGGT+TGG | 0.496846 | 8.3:-48281196 | MS.gene32244:CDS |
TGTCATAACATGCCCTTGTT+CGG | 0.497159 | 8.3:+48278696 | None:intergenic |
TAGAGAAAGAGAGATGAGGT+GGG | 0.497897 | 8.3:+48281678 | None:intergenic |
TCACAAGAACATGGATTTGG+TGG | 0.498628 | 8.3:-48280472 | MS.gene32244:CDS |
GAGGTTGTGGCATGTGTGTT+CGG | 0.500639 | 8.3:-48280922 | MS.gene32244:CDS |
TTAGAGAAAGAGAGATGAGG+TGG | 0.501079 | 8.3:+48281677 | None:intergenic |
TTCTCAGGTCAAGGGTGCTG+TGG | 0.503409 | 8.3:-48280448 | MS.gene32244:CDS |
GGTATATGATCAATTTGAGA+TGG | 0.504143 | 8.3:-48280346 | MS.gene32244:CDS |
GGGGCCCAAACTCGCAAAGC+AGG | 0.504337 | 8.3:+48278779 | None:intergenic |
GGTGAAAATGATGTCGGTAA+TGG | 0.505855 | 8.3:-48278920 | MS.gene32244:CDS |
AAATGGTGGTGATGATGATA+AGG | 0.506403 | 8.3:-48281252 | MS.gene32244:CDS |
AAATTGCAAAGGAATATAGA+AGG | 0.507991 | 8.3:-48278845 | MS.gene32244:CDS |
GTGGAAGGAAGGAGAGGTTG+TGG | 0.509059 | 8.3:-48280935 | MS.gene32244:CDS |
GAGGGAATCGATGAGATTTG+CGG | 0.509287 | 8.3:+48281535 | None:intergenic |
ATACTCTCTAACAACATGTT+CGG | 0.509656 | 8.3:+48279744 | None:intergenic |
CAAATATCTGATTTGGCTTG+GGG | 0.510230 | 8.3:+48280205 | None:intergenic |
AGTGTTTAGGGAGAAAAGGA+TGG | 0.516378 | 8.3:+48281651 | None:intergenic |
AGAAGAGAAGAAGAATTTGA+AGG | 0.517755 | 8.3:+48281703 | None:intergenic |
AACATTCAGTGCCACATGGA+AGG | 0.518047 | 8.3:-48279490 | MS.gene32244:CDS |
GAATTAAATGAATTGAAGAA+AGG | 0.518176 | 8.3:+48281413 | None:intergenic |
AGACAAAAGAGCCGAAGAAA+CGG | 0.519576 | 8.3:+48280587 | None:intergenic |
TGTGGCGTCGGTGTCGGCGT+CGG | 0.522219 | 8.3:+48281475 | None:intergenic |
TTTATGAACAATGTCTTCAA+GGG | 0.522676 | 8.3:+48279060 | None:intergenic |
ACTCAACAACATCTCCCAAA+CGG | 0.525892 | 8.3:+48280698 | None:intergenic |
GGGACTAGGAAATTGGGTTG+GGG | 0.528099 | 8.3:-48281194 | MS.gene32244:CDS |
GCAACTGAATTTGGCTGTCA+GGG | 0.529058 | 8.3:-48280738 | MS.gene32244:CDS |
GAAATTCGGAAAGGTGGATA+GGG | 0.529156 | 8.3:+48281580 | None:intergenic |
GTTGACAATGGTAAAGGTGG+TGG | 0.529773 | 8.3:-48280639 | MS.gene32244:CDS |
ACATTCAGTGCCACATGGAA+GGG | 0.533071 | 8.3:-48279489 | MS.gene32244:CDS |
AAGAGGGAAATTCGGAAAGG+TGG | 0.533318 | 8.3:+48281574 | None:intergenic |
AGTTGTTGGTGGTGTTGTGA+AGG | 0.538955 | 8.3:+48281795 | None:intergenic |
CATGCATTATTATCTTTCAG+AGG | 0.540832 | 8.3:+48279895 | None:intergenic |
GAATTTGAAGGCGAAAAGAG+AGG | 0.542776 | 8.3:+48281715 | None:intergenic |
TCTTTATAGAGAAGATTGCT+GGG | 0.543170 | 8.3:-48280673 | MS.gene32244:CDS |
ACCACAATTACATGGCTGAT+GGG | 0.543663 | 8.3:-48278559 | MS.gene32244:CDS |
GGAAACAATTCCTCAGATCC+AGG | 0.543683 | 8.3:-48279926 | MS.gene32244:CDS |
GCTGTTAAATAAACAATCCT+GGG | 0.543796 | 8.3:+48278991 | None:intergenic |
TCTCAGGTCAAGGGTGCTGT+GGG | 0.546577 | 8.3:-48280447 | MS.gene32244:CDS |
AAAGGTGGTGGATCTTGTGT+TGG | 0.550127 | 8.3:-48280627 | MS.gene32244:CDS |
TTGGTGGATTCTCAGGTCAA+GGG | 0.550615 | 8.3:-48280456 | MS.gene32244:CDS |
TGTAAATGAGGATGAAGCCC+AGG | 0.550673 | 8.3:-48279008 | MS.gene32244:CDS |
GACCACAATTACATGGCTGA+TGG | 0.551502 | 8.3:-48278560 | MS.gene32244:CDS |
GGTTGTTTGAGATTGGGACT+AGG | 0.551975 | 8.3:-48281208 | MS.gene32244:CDS |
TCCCATCAGCCATGTAATTG+TGG | 0.552739 | 8.3:+48278558 | None:intergenic |
TCTCAGACATCTGATGCAGC+AGG | 0.553878 | 8.3:-48279784 | MS.gene32244:CDS |
GATGTGAATTTACAAGGTGG+TGG | 0.556488 | 8.3:-48280954 | MS.gene32244:CDS |
CTGAATTTGGCTGTCAGGGG+CGG | 0.556844 | 8.3:-48280734 | MS.gene32244:CDS |
ATCATGAAGAAGCTGAGTGA+GGG | 0.557936 | 8.3:+48281517 | None:intergenic |
TTGTGGCATGTGTGTTCGGA+TGG | 0.557955 | 8.3:-48280918 | MS.gene32244:CDS |
GCGTCGGAATTAGGTTCCCA+GGG | 0.558197 | 8.3:+48281491 | None:intergenic |
CATTCAGTGCCACATGGAAG+GGG | 0.558623 | 8.3:-48279488 | MS.gene32244:CDS |
TATTTACTGGCTATGTCAGA+AGG | 0.559398 | 8.3:-48279956 | MS.gene32244:CDS |
TGGTGGTGTTGTGAAGGAGG+AGG | 0.560802 | 8.3:+48281801 | None:intergenic |
AAAAGAGAGGTTGAAAGTGG+AGG | 0.562608 | 8.3:+48281728 | None:intergenic |
CATCTGAACCTATTGACTGC+GGG | 0.563441 | 8.3:+48278582 | None:intergenic |
TGAATTTACAAGGTGGTGGA+AGG | 0.564516 | 8.3:-48280950 | MS.gene32244:CDS |
GCATGAGGTTTACTATGCGA+TGG | 0.565898 | 8.3:-48280319 | MS.gene32244:CDS |
AGTATGTGGTTCAGTTGCTA+AGG | 0.566719 | 8.3:-48278531 | MS.gene32244:CDS |
AGATTGCTGGGCTTTGGTGT+CGG | 0.568158 | 8.3:-48280661 | MS.gene32244:CDS |
TTGGAACCTTGAAAATTATG+TGG | 0.569037 | 8.3:-48279452 | MS.gene32244:CDS |
ATCCCAAAATCGGAGTTTCG+TGG | 0.569945 | 8.3:-48281112 | MS.gene32244:CDS |
AACAATAGAAGTTGTGGCGT+CGG | 0.572685 | 8.3:+48281463 | None:intergenic |
TTCAGATGACCACAATTACA+TGG | 0.573240 | 8.3:-48278567 | MS.gene32244:CDS |
AGTGGAGAAAGGATGATCGA+AGG | 0.573497 | 8.3:+48281622 | None:intergenic |
AGTTTGGGCCCCAAAACAGA+AGG | 0.577145 | 8.3:-48278768 | MS.gene32244:CDS |
AACGGCAAAATTGAAAGTTA+CGG | 0.577309 | 8.3:-48280895 | MS.gene32244:CDS |
GCTATGTCAGAAGGTTGATA+GGG | 0.578195 | 8.3:-48279947 | MS.gene32244:CDS |
ATTCTGACAAAGTCAGATCA+TGG | 0.578418 | 8.3:+48280229 | None:intergenic |
GTGTCGGTTGACAATGGTAA+AGG | 0.578965 | 8.3:-48280645 | MS.gene32244:CDS |
TGGTGAACAGCTAGTCCCAC+AGG | 0.586283 | 8.3:-48280142 | MS.gene32244:CDS |
CCAGCTGACACAACCACCTG+TGG | 0.587485 | 8.3:+48280126 | None:intergenic |
TGATTCGGTTCTGGTGCGTG+AGG | 0.589110 | 8.3:-48280826 | MS.gene32244:CDS |
ATTTGAGATGGATCTGCATG+AGG | 0.589438 | 8.3:-48280334 | MS.gene32244:CDS |
GCTTCTTCATGATTACCCCT+GGG | 0.589735 | 8.3:-48281507 | MS.gene32244:CDS |
AGGCGAAACAATAGAAGTTG+TGG | 0.591476 | 8.3:+48281457 | None:intergenic |
CCAAATCAGATATTTGCAGA+AGG | 0.592593 | 8.3:-48280198 | MS.gene32244:CDS |
GGGGAGGATGTGAATTTACA+AGG | 0.594209 | 8.3:-48280960 | MS.gene32244:CDS |
AAGGTGGTGGAAGGAAGGAG+AGG | 0.597324 | 8.3:-48280941 | MS.gene32244:CDS |
AGAACTGTTAAAGGATCCCA+AGG | 0.597965 | 8.3:-48279842 | MS.gene32244:CDS |
GGAGAATGGACCTGGATCTG+AGG | 0.599289 | 8.3:+48279916 | None:intergenic |
ACTGAATGTTCTCTAAGAGT+AGG | 0.599397 | 8.3:+48279503 | None:intergenic |
AGTCGGAGGTTTAGGTCTAA+GGG | 0.603476 | 8.3:-48281302 | MS.gene32244:CDS |
TCGCATATTTCACAAGAACA+TGG | 0.604505 | 8.3:-48280481 | MS.gene32244:CDS |
CAAATCAGATATTTGCAGAA+GGG | 0.604754 | 8.3:-48280197 | MS.gene32244:CDS |
AGTTTAGAGAAAGAGAGATG+AGG | 0.610468 | 8.3:+48281674 | None:intergenic |
GCTTTCGGGTGATATGAAAG+AGG | 0.611011 | 8.3:+48281557 | None:intergenic |
GCATGTGTGTTCGGATGGAA+CGG | 0.614181 | 8.3:-48280913 | MS.gene32244:CDS |
CCAAAATCAGAAGCCGAGTG+TGG | 0.615958 | 8.3:+48280552 | None:intergenic |
TGGTGATGATGATAAGGATG+AGG | 0.620265 | 8.3:-48281246 | MS.gene32244:CDS |
CAGCTGACACAACCACCTGT+GGG | 0.621240 | 8.3:+48280127 | None:intergenic |
AATTCGCAACGAATCCTCAC+CGG | 0.621527 | 8.3:+48281370 | None:intergenic |
TTACAATCAGAGGTTGGACG+CGG | 0.622665 | 8.3:-48279568 | MS.gene32244:CDS |
ATTCAGTGCCACATGGAAGG+GGG | 0.624518 | 8.3:-48279487 | MS.gene32244:CDS |
ATGTAAGAGGAAAATTGCAA+AGG | 0.624974 | 8.3:-48278856 | MS.gene32244:CDS |
GAAGAACGATGCGGTTTGTG+TGG | 0.627819 | 8.3:+48281843 | None:intergenic |
TTCAGTGCCACATGGAAGGG+GGG | 0.628285 | 8.3:-48279486 | MS.gene32244:CDS |
TAATAATGCATGTAGTAGCA+TGG | 0.628562 | 8.3:-48279884 | MS.gene32244:CDS |
CTTTCGAACAGGATTCAACA+GGG | 0.630126 | 8.3:-48280036 | MS.gene32244:CDS |
AATCATGAAGAAGCTGAGTG+AGG | 0.630853 | 8.3:+48281516 | None:intergenic |
ATGTACTTCGAAACCTCACA+TGG | 0.630930 | 8.3:-48280386 | MS.gene32244:CDS |
TCGGTTGACAATGGTAAAGG+TGG | 0.634473 | 8.3:-48280642 | MS.gene32244:CDS |
CTTTCGGGTGATATGAAAGA+GGG | 0.636994 | 8.3:+48281558 | None:intergenic |
GAGATGGGTGAAAATGATGT+CGG | 0.641552 | 8.3:-48278926 | MS.gene32244:CDS |
CAACTGAATTTGGCTGTCAG+GGG | 0.644940 | 8.3:-48280737 | MS.gene32244:CDS |
CACAAAAGGAGCTCCATGTG+AGG | 0.649703 | 8.3:+48280373 | None:intergenic |
ATGAGGTTGATATTATACGT+GGG | 0.650955 | 8.3:-48281229 | MS.gene32244:CDS |
GATGAGGTTGATATTATACG+TGG | 0.651489 | 8.3:-48281230 | MS.gene32244:CDS |
AAGAACGATGCGGTTTGTGT+GGG | 0.655015 | 8.3:+48281844 | None:intergenic |
TGAAAGAGGGAAATTCGGAA+AGG | 0.656495 | 8.3:+48281571 | None:intergenic |
TCATCTGAACCTATTGACTG+CGG | 0.657698 | 8.3:+48278581 | None:intergenic |
GCTTTGGTGTCGGTTGACAA+TGG | 0.659635 | 8.3:-48280651 | MS.gene32244:CDS |
TGCTGCATCAGATGTCTGAG+AGG | 0.663550 | 8.3:+48279786 | None:intergenic |
TTGCAAAGGAATATAGAAGG+TGG | 0.666119 | 8.3:-48278842 | MS.gene32244:CDS |
AGAGAACATTCAGTGCCACA+TGG | 0.668548 | 8.3:-48279494 | MS.gene32244:CDS |
CGCCAATGACAAGAAGCACA+CGG | 0.669971 | 8.3:-48278610 | MS.gene32244:CDS |
CGCCAATGACAAGAAACACA+CGG | 0.669971 | 8.3:-48278661 | MS.gene32244:CDS |
GTTTGGGCCCCAAAACAGAA+GGG | 0.683185 | 8.3:-48278767 | MS.gene32244:CDS |
GCTGATGGGAATCAAGTATG+TGG | 0.688438 | 8.3:-48278545 | MS.gene32244:CDS |
GTCGCTCTGCCAAAGCTACG+AGG | 0.690345 | 8.3:+48279992 | None:intergenic |
GGATTGTTTATTTAACAGCG+AGG | 0.690954 | 8.3:-48278987 | MS.gene32244:CDS |
GTCAGCTGGAATTAATGCTG+AGG | 0.696346 | 8.3:-48280112 | MS.gene32244:CDS |
GCACCAGAACCGAATCAGAG+AGG | 0.732452 | 8.3:+48280832 | None:intergenic |
TGAACAGCTAGTCCCACAGG+TGG | 0.739835 | 8.3:-48280139 | MS.gene32244:CDS |
GATCTATGAGAAGAACGATG+CGG | 0.745129 | 8.3:+48281834 | None:intergenic |
GAGGATGTGAATTTACAAGG+TGG | 0.746096 | 8.3:-48280957 | MS.gene32244:CDS |
CGTCGGAATTAGGTTCCCAG+GGG | 0.749727 | 8.3:+48281492 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATCATAAACATAAATTA+CGG | + | chr8.3:48280699-48280718 | None:intergenic | 10.0% |
!!! | TATTTTGTTTTCTAAATTTA+CGG | - | chr8.3:48280725-48280744 | MS.gene32244:CDS | 10.0% |
!! | ATTAGTAAAAGAACTGTTAA+AGG | - | chr8.3:48280550-48280569 | MS.gene32244:CDS | 20.0% |
!! | CCTATTAAAAGAATTCATAT+TGG | + | chr8.3:48279880-48279899 | None:intergenic | 20.0% |
!! | GAATTAAATGAATTGAAGAA+AGG | + | chr8.3:48278991-48279010 | None:intergenic | 20.0% |
!! | GTAAACAAGAGAATTAAATT+AGG | + | chr8.3:48278967-48278986 | None:intergenic | 20.0% |
!! | TCATAAAATCTACAACAAAA+TGG | - | chr8.3:48281357-48281376 | MS.gene32244:CDS | 20.0% |
!! | TCATATCTAATTCTTACTTA+AGG | + | chr8.3:48280785-48280804 | None:intergenic | 20.0% |
!! | TTGTTAATTCATCTATTTAC+TGG | - | chr8.3:48280432-48280451 | MS.gene32244:CDS | 20.0% |
!!! | AGAGATTTTTAGGTTTTTTT+GGG | - | chr8.3:48279070-48279089 | MS.gene32244:CDS | 20.0% |
!!! | CCAATATGAATTCTTTTAAT+AGG | - | chr8.3:48279877-48279896 | MS.gene32244:CDS | 20.0% |
!!! | TCATTGGATAGAAAATTTTA+CGG | - | chr8.3:48281448-48281467 | MS.gene32244:CDS | 20.0% |
! | AAATTGCAAAGGAATATAGA+AGG | - | chr8.3:48281556-48281575 | MS.gene32244:CDS | 25.0% |
! | AATTCATTTAATTCTCTTGC+AGG | - | chr8.3:48278997-48279016 | MS.gene32244:CDS | 25.0% |
! | ACCGAAAATGTCATATATAT+TGG | + | chr8.3:48281159-48281178 | None:intergenic | 25.0% |
! | ATCATATACCAAATCACAAA+AGG | + | chr8.3:48280045-48280064 | None:intergenic | 25.0% |
! | ATTACGGAAAATGTGATAAA+AGG | + | chr8.3:48280683-48280702 | None:intergenic | 25.0% |
! | TTTATGAACAATGTCTTCAA+GGG | + | chr8.3:48281344-48281363 | None:intergenic | 25.0% |
!! | ATGAATTCTTTTAATAGGAC+AGG | - | chr8.3:48279882-48279901 | MS.gene32244:CDS | 25.0% |
!! | ATTGGAAATTTTACAATCAG+AGG | - | chr8.3:48280823-48280842 | MS.gene32244:CDS | 25.0% |
!! | GCCAATATATATGACATTTT+CGG | - | chr8.3:48281155-48281174 | MS.gene32244:CDS | 25.0% |
!! | TTTTATGAACAATGTCTTCA+AGG | + | chr8.3:48281345-48281364 | None:intergenic | 25.0% |
!!! | AATGTTTTTGATGTAGTTGT+TGG | + | chr8.3:48278623-48278642 | None:intergenic | 25.0% |
!!! | ACTGCAAATTTTATTTCGAT+TGG | - | chr8.3:48280805-48280824 | MS.gene32244:CDS | 25.0% |
!!! | AGTTGAAGTTTTTAAAATGC+TGG | - | chr8.3:48280123-48280142 | MS.gene32244:CDS | 25.0% |
!!! | AGTTTGATTCTCTTTTTTCA+TGG | - | chr8.3:48281227-48281246 | MS.gene32244:CDS | 25.0% |
!!! | ATCTTCAAGTTTTGGATTTT+AGG | - | chr8.3:48279406-48279425 | MS.gene32244:intron | 25.0% |
!!! | GAGAGATTTTTAGGTTTTTT+TGG | - | chr8.3:48279069-48279088 | MS.gene32244:CDS | 25.0% |
!!! | TCTTCAAGTTTTGGATTTTA+GGG | - | chr8.3:48279407-48279426 | MS.gene32244:intron | 25.0% |
!!! | TTTTTAGAAATCTTTCGAAC+AGG | - | chr8.3:48280354-48280373 | MS.gene32244:CDS | 25.0% |
AACGGCAAAATTGAAAGTTA+CGG | - | chr8.3:48279506-48279525 | MS.gene32244:CDS | 30.0% | |
ACATTCTTCTGCAAATGAAA+AGG | + | chr8.3:48281529-48281548 | None:intergenic | 30.0% | |
AGAAGAGAAGAAGAATTTGA+AGG | + | chr8.3:48278701-48278720 | None:intergenic | 30.0% | |
AGGATTTCTTAGTTTCTGTT+TGG | - | chr8.3:48281088-48281107 | MS.gene32244:CDS | 30.0% | |
ATACTCTCTAACAACATGTT+CGG | + | chr8.3:48280660-48280679 | None:intergenic | 30.0% | |
ATCTTTATAGAGAAGATTGC+TGG | - | chr8.3:48279727-48279746 | MS.gene32244:intron | 30.0% | |
ATGTAAGAGGAAAATTGCAA+AGG | - | chr8.3:48281545-48281564 | MS.gene32244:CDS | 30.0% | |
ATTTCACAAGAACATGGATT+TGG | - | chr8.3:48279926-48279945 | MS.gene32244:CDS | 30.0% | |
CAAATCAGATATTTGCAGAA+GGG | - | chr8.3:48280204-48280223 | MS.gene32244:CDS | 30.0% | |
CATGCATTATTATCTTTCAG+AGG | + | chr8.3:48280509-48280528 | None:intergenic | 30.0% | |
GCTGTTAAATAAACAATCCT+GGG | + | chr8.3:48281413-48281432 | None:intergenic | 30.0% | |
GGTATATGATCAATTTGAGA+TGG | - | chr8.3:48280055-48280074 | MS.gene32244:CDS | 30.0% | |
GGTTTGATATATCCCAAAAT+CGG | - | chr8.3:48279279-48279298 | MS.gene32244:intron | 30.0% | |
TAATAATGCATGTAGTAGCA+TGG | - | chr8.3:48280517-48280536 | MS.gene32244:CDS | 30.0% | |
TATTATCTTTCAGAGGAGAA+TGG | + | chr8.3:48280502-48280521 | None:intergenic | 30.0% | |
TCACAACAATTGTACTCAAT+AGG | + | chr8.3:48279387-48279406 | None:intergenic | 30.0% | |
TCTTTATAGAGAAGATTGCT+GGG | - | chr8.3:48279728-48279747 | MS.gene32244:intron | 30.0% | |
TGATATGAAAGAGGGAAATT+CGG | + | chr8.3:48278838-48278857 | None:intergenic | 30.0% | |
TTATGCTTTAGCATGAACTA+TGG | - | chr8.3:48281058-48281077 | MS.gene32244:CDS | 30.0% | |
TTGGAACCTTGAAAATTATG+TGG | - | chr8.3:48280949-48280968 | MS.gene32244:CDS | 30.0% | |
TTGGGATATATCAAACCAAA+AGG | + | chr8.3:48279276-48279295 | None:intergenic | 30.0% | |
TTTGACAAACTTCTGTTTAC+TGG | + | chr8.3:48280870-48280889 | None:intergenic | 30.0% | |
! | AAAATTTTACGGAGATGAGA+TGG | - | chr8.3:48281459-48281478 | MS.gene32244:CDS | 30.0% |
! | AAATTTTACGGAGATGAGAT+GGG | - | chr8.3:48281460-48281479 | MS.gene32244:CDS | 30.0% |
! | ATTTCATACCCTTCTGTTTT+GGG | + | chr8.3:48281645-48281664 | None:intergenic | 30.0% |
! | GAAATTTTACAATCAGAGGT+TGG | - | chr8.3:48280827-48280846 | MS.gene32244:CDS | 30.0% |
! | TCTTTCTGTGAGAGATTTTT+AGG | - | chr8.3:48279060-48279079 | MS.gene32244:CDS | 30.0% |
! | TCTTTGCCACATAATTTTCA+AGG | + | chr8.3:48280958-48280977 | None:intergenic | 30.0% |
! | TCTTTGGATTCAATTTTGCT+TGG | - | chr8.3:48279237-48279256 | MS.gene32244:intron | 30.0% |
! | TTGAGATTTTGGATGTGAAT+GGG | - | chr8.3:48279358-48279377 | MS.gene32244:intron | 30.0% |
! | TTTAAAATGCTGGATGAAAC+AGG | - | chr8.3:48280133-48280152 | MS.gene32244:CDS | 30.0% |
!! | AGTTGGATTGGTGTTAAAAA+TGG | - | chr8.3:48279132-48279151 | MS.gene32244:intron | 30.0% |
!! | ATGAGGTTGATATTATACGT+GGG | - | chr8.3:48279172-48279191 | MS.gene32244:intron | 30.0% |
!! | CAAATGAAAAGGCTTGTTTT+CGG | + | chr8.3:48281518-48281537 | None:intergenic | 30.0% |
!! | TCAATTGACTCTTGAGATTT+TGG | - | chr8.3:48279347-48279366 | MS.gene32244:intron | 30.0% |
!! | TTGTTGTGATCTTCAAGTTT+TGG | - | chr8.3:48279398-48279417 | MS.gene32244:intron | 30.0% |
!!! | AGAAAATAGGGTTTTAGAAG+TGG | + | chr8.3:48278650-48278669 | None:intergenic | 30.0% |
!!! | ATTTTAGGGTTTTTGGTAGA+GGG | - | chr8.3:48279421-48279440 | MS.gene32244:intron | 30.0% |
!!! | GTTTTGGATTTTAGGGTTTT+TGG | - | chr8.3:48279414-48279433 | MS.gene32244:intron | 30.0% |
AAAAAGGAAAGACCGAACAA+GGG | - | chr8.3:48281693-48281712 | MS.gene32244:CDS | 35.0% | |
AAAGTGGAGGGAAAGAAAAT+AGG | + | chr8.3:48278663-48278682 | None:intergenic | 35.0% | |
AAGTGGAGGGAAAGAAAATA+GGG | + | chr8.3:48278662-48278681 | None:intergenic | 35.0% | |
ACCTTTCGAAGATTCCAAAA+AGG | - | chr8.3:48281677-48281696 | MS.gene32244:CDS | 35.0% | |
AGTTTAGAGAAAGAGAGATG+AGG | + | chr8.3:48278730-48278749 | None:intergenic | 35.0% | |
ATTCTGACAAAGTCAGATCA+TGG | + | chr8.3:48280175-48280194 | None:intergenic | 35.0% | |
CATTTGCAGAAGAATGTAAG+AGG | - | chr8.3:48281532-48281551 | MS.gene32244:CDS | 35.0% | |
CCAAATCAGATATTTGCAGA+AGG | - | chr8.3:48280203-48280222 | MS.gene32244:CDS | 35.0% | |
CCTTCTGCAAATATCTGATT+TGG | + | chr8.3:48280206-48280225 | None:intergenic | 35.0% | |
CGCTGTTAAATAAACAATCC+TGG | + | chr8.3:48281414-48281433 | None:intergenic | 35.0% | |
GAATGTATGAAGGTAGATTC+AGG | - | chr8.3:48279606-48279625 | MS.gene32244:intron | 35.0% | |
GCATGAACTATGGAGATTTA+AGG | - | chr8.3:48281068-48281087 | MS.gene32244:CDS | 35.0% | |
GGATTGTTTATTTAACAGCG+AGG | - | chr8.3:48281414-48281433 | MS.gene32244:CDS | 35.0% | |
GTGTGTGCTTTCTTTACTTT+AGG | + | chr8.3:48281279-48281298 | None:intergenic | 35.0% | |
TCGCATATTTCACAAGAACA+TGG | - | chr8.3:48279920-48279939 | MS.gene32244:CDS | 35.0% | |
TCTGCTTCTGTTTGTAAATG+AGG | - | chr8.3:48281381-48281400 | MS.gene32244:CDS | 35.0% | |
TGAGCAGAAAAAGAAGATGA+CGG | - | chr8.3:48279986-48280005 | MS.gene32244:CDS | 35.0% | |
TGGCAAAGATCATAAAAAGC+AGG | - | chr8.3:48280969-48280988 | MS.gene32244:CDS | 35.0% | |
TGTGAAATCTGCGAAATTTC+AGG | - | chr8.3:48281308-48281327 | MS.gene32244:CDS | 35.0% | |
TTCAGATGACCACAATTACA+TGG | - | chr8.3:48281834-48281853 | MS.gene32244:CDS | 35.0% | |
TTGAACGAGTTACCTCAAAA+TGG | - | chr8.3:48280239-48280258 | MS.gene32244:CDS | 35.0% | |
TTGCAAAGGAATATAGAAGG+TGG | - | chr8.3:48281559-48281578 | MS.gene32244:CDS | 35.0% | |
! | AAATGGTGGTGATGATGATA+AGG | - | chr8.3:48279149-48279168 | MS.gene32244:intron | 35.0% |
! | ACTGAATGTTCTCTAAGAGT+AGG | + | chr8.3:48280901-48280920 | None:intergenic | 35.0% |
! | CTTGAGATTTTGGATGTGAA+TGG | - | chr8.3:48279357-48279376 | MS.gene32244:intron | 35.0% |
! | GATTTCATACCCTTCTGTTT+TGG | + | chr8.3:48281646-48281665 | None:intergenic | 35.0% |
! | GTTTTTGATGTAGTTGTTGG+TGG | + | chr8.3:48278620-48278639 | None:intergenic | 35.0% |
! | TAGACCTTTTACCGTTTCTT+CGG | - | chr8.3:48279803-48279822 | MS.gene32244:CDS | 35.0% |
! | TATTTACTGGCTATGTCAGA+AGG | - | chr8.3:48280445-48280464 | MS.gene32244:CDS | 35.0% |
! | TGTTCGGTGATTATAGTAGT+TGG | + | chr8.3:48280644-48280663 | None:intergenic | 35.0% |
! | TTCTGTTCGTTGTTGTTCTA+GGG | - | chr8.3:48279314-48279333 | MS.gene32244:intron | 35.0% |
! | TTTCATACCCTTCTGTTTTG+GGG | + | chr8.3:48281644-48281663 | None:intergenic | 35.0% |
! | TTTCTGTTCGTTGTTGTTCT+AGG | - | chr8.3:48279313-48279332 | MS.gene32244:intron | 35.0% |
!! | AAAGAGTGTTTAGGGAGAAA+AGG | + | chr8.3:48278757-48278776 | None:intergenic | 35.0% |
!! | CAAATATCTGATTTGGCTTG+GGG | + | chr8.3:48280199-48280218 | None:intergenic | 35.0% |
!! | GATGAGGTTGATATTATACG+TGG | - | chr8.3:48279171-48279190 | MS.gene32244:intron | 35.0% |
!! | GCAAATATCTGATTTGGCTT+GGG | + | chr8.3:48280200-48280219 | None:intergenic | 35.0% |
!! | TGCAAATATCTGATTTGGCT+TGG | + | chr8.3:48280201-48280220 | None:intergenic | 35.0% |
!! | TGGATTGGTGTTAAAAATGG+TGG | - | chr8.3:48279135-48279154 | MS.gene32244:intron | 35.0% |
!! | TTGTTGTTCTAGGGAAGTTA+AGG | - | chr8.3:48279323-48279342 | MS.gene32244:intron | 35.0% |
!!! | AGGTGAGTTTTTTGCTGATA+GGG | - | chr8.3:48279626-48279645 | MS.gene32244:intron | 35.0% |
!!! | GATTTTAGGGTTTTTGGTAG+AGG | - | chr8.3:48279420-48279439 | MS.gene32244:intron | 35.0% |
!!! | GTTTTTTTGGGAATGTCAGT+CGG | - | chr8.3:48279082-48279101 | MS.gene32244:intron | 35.0% |
!!! | TCCTTTTTGGAATCTTCGAA+AGG | + | chr8.3:48281681-48281700 | None:intergenic | 35.0% |
!!! | TTTTAGGGTTTTTGGTAGAG+GGG | - | chr8.3:48279422-48279441 | MS.gene32244:intron | 35.0% |
AAAAGAGAGGTTGAAAGTGG+AGG | + | chr8.3:48278676-48278695 | None:intergenic | 40.0% | |
AAAGAGAGGTTGAAAGTGGA+GGG | + | chr8.3:48278675-48278694 | None:intergenic | 40.0% | |
AACAATAGAAGTTGTGGCGT+CGG | + | chr8.3:48278941-48278960 | None:intergenic | 40.0% | |
AATCATGAAGAAGCTGAGTG+AGG | + | chr8.3:48278888-48278907 | None:intergenic | 40.0% | |
ACCACAATTACATGGCTGAT+GGG | - | chr8.3:48281842-48281861 | MS.gene32244:CDS | 40.0% | |
ACTCAACAACATCTCCCAAA+CGG | + | chr8.3:48279706-48279725 | None:intergenic | 40.0% | |
AGAACTGTTAAAGGATCCCA+AGG | - | chr8.3:48280559-48280578 | MS.gene32244:CDS | 40.0% | |
AGACAAAAGAGCCGAAGAAA+CGG | + | chr8.3:48279817-48279836 | None:intergenic | 40.0% | |
AGGAGATTGAAAGTGGAGAA+AGG | + | chr8.3:48278793-48278812 | None:intergenic | 40.0% | |
AGGCGAAACAATAGAAGTTG+TGG | + | chr8.3:48278947-48278966 | None:intergenic | 40.0% | |
AGTATGTGGTTCAGTTGCTA+AGG | - | chr8.3:48281870-48281889 | MS.gene32244:CDS | 40.0% | |
AGTGTTTAGGGAGAAAAGGA+TGG | + | chr8.3:48278753-48278772 | None:intergenic | 40.0% | |
ATCATGAAGAAGCTGAGTGA+GGG | + | chr8.3:48278887-48278906 | None:intergenic | 40.0% | |
ATGTACTTCGAAACCTCACA+TGG | - | chr8.3:48280015-48280034 | MS.gene32244:CDS | 40.0% | |
CAAAAAGGAAAGACCGAACA+AGG | - | chr8.3:48281692-48281711 | MS.gene32244:CDS | 40.0% | |
CTTCGAAAGGTGATCTTTCT+TGG | + | chr8.3:48281668-48281687 | None:intergenic | 40.0% | |
CTTTCGAACAGGATTCAACA+GGG | - | chr8.3:48280365-48280384 | MS.gene32244:CDS | 40.0% | |
GAAATTCGGAAAGGTGGATA+GGG | + | chr8.3:48278824-48278843 | None:intergenic | 40.0% | |
GAATTTGAAGGCGAAAAGAG+AGG | + | chr8.3:48278689-48278708 | None:intergenic | 40.0% | |
GAGATGCTAGCAACTGAATT+TGG | - | chr8.3:48279654-48279673 | MS.gene32244:intron | 40.0% | |
GAGATGGGTGAAAATGATGT+CGG | - | chr8.3:48281475-48281494 | MS.gene32244:CDS | 40.0% | |
GAGATTGGGACTAGGAAATT+GGG | - | chr8.3:48279201-48279220 | MS.gene32244:intron | 40.0% | |
GAGGATGTGAATTTACAAGG+TGG | - | chr8.3:48279444-48279463 | MS.gene32244:CDS | 40.0% | |
GATCTATGAGAAGAACGATG+CGG | + | chr8.3:48278570-48278589 | None:intergenic | 40.0% | |
GATGTGAATTTACAAGGTGG+TGG | - | chr8.3:48279447-48279466 | MS.gene32244:CDS | 40.0% | |
GGTGAAAATGATGTCGGTAA+TGG | - | chr8.3:48281481-48281500 | MS.gene32244:CDS | 40.0% | |
GGTGTTCATTGTAGTTGGAT+TGG | - | chr8.3:48279120-48279139 | MS.gene32244:intron | 40.0% | |
TAGAGAAAGAGAGATGAGGT+GGG | + | chr8.3:48278726-48278745 | None:intergenic | 40.0% | |
TCACAAGAACATGGATTTGG+TGG | - | chr8.3:48279929-48279948 | MS.gene32244:CDS | 40.0% | |
TCTTTCGAACAGGATTCAAC+AGG | - | chr8.3:48280364-48280383 | MS.gene32244:CDS | 40.0% | |
TGAAAGAGGGAAATTCGGAA+AGG | + | chr8.3:48278833-48278852 | None:intergenic | 40.0% | |
TGAGATTGGGACTAGGAAAT+TGG | - | chr8.3:48279200-48279219 | MS.gene32244:intron | 40.0% | |
TGTCATAACATGCCCTTGTT+CGG | + | chr8.3:48281708-48281727 | None:intergenic | 40.0% | |
TTAGAGAAAGAGAGATGAGG+TGG | + | chr8.3:48278727-48278746 | None:intergenic | 40.0% | |
TTTGGAGAGGAGATTGAAAG+TGG | + | chr8.3:48278800-48278819 | None:intergenic | 40.0% | |
! | AAACCACGAAACTCCGATTT+TGG | + | chr8.3:48279295-48279314 | None:intergenic | 40.0% |
! | AACCACGAAACTCCGATTTT+GGG | + | chr8.3:48279294-48279313 | None:intergenic | 40.0% |
! | ACTAGCTGTTCACCATTTTG+AGG | + | chr8.3:48280254-48280273 | None:intergenic | 40.0% |
! | ATACGTGGGTTGTTTGAGAT+TGG | - | chr8.3:48279186-48279205 | MS.gene32244:intron | 40.0% |
! | ATGGAGCTCCTTTTGTGATT+TGG | - | chr8.3:48280034-48280053 | MS.gene32244:CDS | 40.0% |
! | ATTTGAGATGGATCTGCATG+AGG | - | chr8.3:48280067-48280086 | MS.gene32244:CDS | 40.0% |
! | CTTGTTCGGTCTTTCCTTTT+TGG | + | chr8.3:48281694-48281713 | None:intergenic | 40.0% |
! | CTTTCGGGTGATATGAAAGA+GGG | + | chr8.3:48278846-48278865 | None:intergenic | 40.0% |
! | TACGTGGGTTGTTTGAGATT+GGG | - | chr8.3:48279187-48279206 | MS.gene32244:intron | 40.0% |
! | TCATCTGAACCTATTGACTG+CGG | + | chr8.3:48281823-48281842 | None:intergenic | 40.0% |
! | TGGTGATGATGATAAGGATG+AGG | - | chr8.3:48279155-48279174 | MS.gene32244:intron | 40.0% |
! | TTCGGCTCTTTTGTCTGTTT+TGG | - | chr8.3:48279821-48279840 | MS.gene32244:CDS | 40.0% |
!! | AGTTGCTAAGGCATTGTTTC+AGG | - | chr8.3:48281882-48281901 | MS.gene32244:CDS | 40.0% |
!! | CGAAGGAGAAAGAGTGTTTA+GGG | + | chr8.3:48278765-48278784 | None:intergenic | 40.0% |
!! | CTAAGGGTGTTCATTGTAGT+TGG | - | chr8.3:48279115-48279134 | MS.gene32244:intron | 40.0% |
!! | CTTGCAGGATTTTTCGATTC+CGG | - | chr8.3:48279012-48279031 | MS.gene32244:CDS | 40.0% |
!! | GAAGTATTGCCTCTCTGATT+CGG | - | chr8.3:48279560-48279579 | MS.gene32244:CDS | 40.0% |
!! | GCTATGTCAGAAGGTTGATA+GGG | - | chr8.3:48280454-48280473 | MS.gene32244:CDS | 40.0% |
!! | TCGAAGGAGAAAGAGTGTTT+AGG | + | chr8.3:48278766-48278785 | None:intergenic | 40.0% |
!! | TGAATTTACAAGGTGGTGGA+AGG | - | chr8.3:48279451-48279470 | MS.gene32244:CDS | 40.0% |
!!! | CAGGTGAGTTTTTTGCTGAT+AGG | - | chr8.3:48279625-48279644 | MS.gene32244:intron | 40.0% |
!!! | GGTTTTAGGGGAATGTATGA+AGG | - | chr8.3:48279596-48279615 | MS.gene32244:CDS | 40.0% |
AACATTCAGTGCCACATGGA+AGG | - | chr8.3:48280911-48280930 | MS.gene32244:CDS | 45.0% | |
AAGAACGATGCGGTTTGTGT+GGG | + | chr8.3:48278560-48278579 | None:intergenic | 45.0% | |
AAGAGGGAAATTCGGAAAGG+TGG | + | chr8.3:48278830-48278849 | None:intergenic | 45.0% | |
AATGCCTGCTTTGCGAGTTT+GGG | - | chr8.3:48281618-48281637 | MS.gene32244:CDS | 45.0% | |
AATTCGCAACGAATCCTCAC+CGG | + | chr8.3:48279034-48279053 | None:intergenic | 45.0% | |
ACATTCAGTGCCACATGGAA+GGG | - | chr8.3:48280912-48280931 | MS.gene32244:CDS | 45.0% | |
AGAGAACATTCAGTGCCACA+TGG | - | chr8.3:48280907-48280926 | MS.gene32244:CDS | 45.0% | |
AGAGCCGAAGAAACGGTAAA+AGG | + | chr8.3:48279810-48279829 | None:intergenic | 45.0% | |
AGCAACTGAATTTGGCTGTC+AGG | - | chr8.3:48279662-48279681 | MS.gene32244:intron | 45.0% | |
AGCTTCTTCATGATTACCCC+TGG | - | chr8.3:48278893-48278912 | MS.gene32244:CDS | 45.0% | |
AGTCATAGACCTCGTAGCTT+TGG | - | chr8.3:48280400-48280419 | MS.gene32244:CDS | 45.0% | |
AGTCGGAGGTTTAGGTCTAA+GGG | - | chr8.3:48279099-48279118 | MS.gene32244:intron | 45.0% | |
AGTGGAGAAAGGATGATCGA+AGG | + | chr8.3:48278782-48278801 | None:intergenic | 45.0% | |
ATCCCAAAATCGGAGTTTCG+TGG | - | chr8.3:48279289-48279308 | MS.gene32244:intron | 45.0% | |
ATGCTTTGCAGCTATGTCCT+TGG | + | chr8.3:48280579-48280598 | None:intergenic | 45.0% | |
CAACTGAATTTGGCTGTCAG+GGG | - | chr8.3:48279664-48279683 | MS.gene32244:intron | 45.0% | |
CGCCAATGACAAGAAACACA+CGG | - | chr8.3:48281740-48281759 | MS.gene32244:CDS | 45.0% | |
CTCAACAACATCTCCCAAAC+GGG | + | chr8.3:48279705-48279724 | None:intergenic | 45.0% | |
GACCACAATTACATGGCTGA+TGG | - | chr8.3:48281841-48281860 | MS.gene32244:CDS | 45.0% | |
GACCGTGTGTTTCTTGTCAT+TGG | + | chr8.3:48281745-48281764 | None:intergenic | 45.0% | |
GAGGGAATCGATGAGATTTG+CGG | + | chr8.3:48278869-48278888 | None:intergenic | 45.0% | |
GCAACTGAATTTGGCTGTCA+GGG | - | chr8.3:48279663-48279682 | MS.gene32244:intron | 45.0% | |
GCATGAGGTTTACTATGCGA+TGG | - | chr8.3:48280082-48280101 | MS.gene32244:CDS | 45.0% | |
GCGAAAAGAGAGGTTGAAAG+TGG | + | chr8.3:48278679-48278698 | None:intergenic | 45.0% | |
GCGAAAATCTGTTCCCGTTT+GGG | - | chr8.3:48279689-48279708 | MS.gene32244:intron | 45.0% | |
GCTGATGGGAATCAAGTATG+TGG | - | chr8.3:48281856-48281875 | MS.gene32244:CDS | 45.0% | |
GCTTCTTCATGATTACCCCT+GGG | - | chr8.3:48278894-48278913 | MS.gene32244:CDS | 45.0% | |
GGAAACAATTCCTCAGATCC+AGG | - | chr8.3:48280475-48280494 | MS.gene32244:CDS | 45.0% | |
GGAAATTCGGAAAGGTGGAT+AGG | + | chr8.3:48278825-48278844 | None:intergenic | 45.0% | |
GGGGAGGATGTGAATTTACA+AGG | - | chr8.3:48279441-48279460 | MS.gene32244:CDS | 45.0% | |
GTCAGCTGGAATTAATGCTG+AGG | - | chr8.3:48280289-48280308 | MS.gene32244:CDS | 45.0% | |
GTGTGGGAGTAACGTATCAT+TGG | + | chr8.3:48278544-48278563 | None:intergenic | 45.0% | |
GTTGACAATGGTAAAGGTGG+TGG | - | chr8.3:48279762-48279781 | MS.gene32244:CDS | 45.0% | |
TAGAGAAGATTGCTGGGCTT+TGG | - | chr8.3:48279734-48279753 | MS.gene32244:intron | 45.0% | |
TCCCATCAGCCATGTAATTG+TGG | + | chr8.3:48281846-48281865 | None:intergenic | 45.0% | |
TCGATGAGATTTGCGGCTTT+CGG | + | chr8.3:48278862-48278881 | None:intergenic | 45.0% | |
TCGGTTGACAATGGTAAAGG+TGG | - | chr8.3:48279759-48279778 | MS.gene32244:CDS | 45.0% | |
TGCTGAGGTTGCAACGAAAA+AGG | - | chr8.3:48280304-48280323 | MS.gene32244:CDS | 45.0% | |
TGCTTTGCAGCTATGTCCTT+GGG | + | chr8.3:48280578-48280597 | None:intergenic | 45.0% | |
TGGGACTAGGAAATTGGGTT+GGG | - | chr8.3:48279206-48279225 | MS.gene32244:intron | 45.0% | |
TGTAAATGAGGATGAAGCCC+AGG | - | chr8.3:48281393-48281412 | MS.gene32244:CDS | 45.0% | |
TTACAATCAGAGGTTGGACG+CGG | - | chr8.3:48280833-48280852 | MS.gene32244:CDS | 45.0% | |
TTGGGACTAGGAAATTGGGT+TGG | - | chr8.3:48279205-48279224 | MS.gene32244:intron | 45.0% | |
! | CATCTGAACCTATTGACTGC+GGG | + | chr8.3:48281822-48281841 | None:intergenic | 45.0% |
! | GCTTTCGGGTGATATGAAAG+AGG | + | chr8.3:48278847-48278866 | None:intergenic | 45.0% |
! | GGCTATGTCAGAAGGTTGAT+AGG | - | chr8.3:48280453-48280472 | MS.gene32244:CDS | 45.0% |
! | GGGTTGGGGTTTTTGTTCTT+TGG | - | chr8.3:48279221-48279240 | MS.gene32244:intron | 45.0% |
! | GGTTCTGCTCTTGTTCCTTT+TGG | - | chr8.3:48279258-48279277 | MS.gene32244:intron | 45.0% |
! | GGTTGTTTGAGATTGGGACT+AGG | - | chr8.3:48279193-48279212 | MS.gene32244:intron | 45.0% |
! | TTCTGGTGCGTGAGGTTTTA+GGG | - | chr8.3:48279583-48279602 | MS.gene32244:CDS | 45.0% |
!! | AAAGGTGGTGGATCTTGTGT+TGG | - | chr8.3:48279774-48279793 | MS.gene32244:CDS | 45.0% |
!! | AAGGGTGCTGTGGGAATTAA+GGG | - | chr8.3:48279963-48279982 | MS.gene32244:CDS | 45.0% |
!! | AGGATTTTTCGATTCCGGTG+AGG | - | chr8.3:48279017-48279036 | MS.gene32244:CDS | 45.0% |
!! | AGTTGTTGGTGGTGTTGTGA+AGG | + | chr8.3:48278609-48278628 | None:intergenic | 45.0% |
!! | CATGGATTTGGTGGATTCTC+AGG | - | chr8.3:48279938-48279957 | MS.gene32244:CDS | 45.0% |
!! | GGCTCTTTTGTCTGTTTTGG+AGG | - | chr8.3:48279824-48279843 | MS.gene32244:CDS | 45.0% |
!! | GGCTTGTTTTCGGCTGAAAA+AGG | + | chr8.3:48281508-48281527 | None:intergenic | 45.0% |
!! | GTGTCGGTTGACAATGGTAA+AGG | - | chr8.3:48279756-48279775 | MS.gene32244:CDS | 45.0% |
!! | TTGGTGGATTCTCAGGTCAA+GGG | - | chr8.3:48279945-48279964 | MS.gene32244:CDS | 45.0% |
!! | TTTACAAGGTGGTGGAAGGA+AGG | - | chr8.3:48279455-48279474 | MS.gene32244:CDS | 45.0% |
!! | TTTGGTGGATTCTCAGGTCA+AGG | - | chr8.3:48279944-48279963 | MS.gene32244:CDS | 45.0% |
!! | TTTTTGGGAATGTCAGTCGG+AGG | - | chr8.3:48279085-48279104 | MS.gene32244:intron | 45.0% |
!!! | TGTTTTGGAGGATCCACACT+CGG | - | chr8.3:48279836-48279855 | MS.gene32244:CDS | 45.0% |
AGTTTGGGCCCCAAAACAGA+AGG | - | chr8.3:48281633-48281652 | MS.gene32244:CDS | 50.0% | |
ATTCAGTGCCACATGGAAGG+GGG | - | chr8.3:48280914-48280933 | MS.gene32244:CDS | 50.0% | |
CACAAAAGGAGCTCCATGTG+AGG | + | chr8.3:48280031-48280050 | None:intergenic | 50.0% | |
CAGTCGGAGGTTTAGGTCTA+AGG | - | chr8.3:48279098-48279117 | MS.gene32244:intron | 50.0% | |
CATTCAGTGCCACATGGAAG+GGG | - | chr8.3:48280913-48280932 | MS.gene32244:CDS | 50.0% | |
CCAAAATCAGAAGCCGAGTG+TGG | + | chr8.3:48279852-48279871 | None:intergenic | 50.0% | |
CGAGGACAGCAGCAAATCAT+TGG | - | chr8.3:48281432-48281451 | MS.gene32244:CDS | 50.0% | |
CGATGAGATTTGCGGCTTTC+GGG | + | chr8.3:48278861-48278880 | None:intergenic | 50.0% | |
CTTTCAGAGGAGAATGGACC+TGG | + | chr8.3:48280496-48280515 | None:intergenic | 50.0% | |
GAAGAACGATGCGGTTTGTG+TGG | + | chr8.3:48278561-48278580 | None:intergenic | 50.0% | |
GAATGCCTGCTTTGCGAGTT+TGG | - | chr8.3:48281617-48281636 | MS.gene32244:CDS | 50.0% | |
GACCGTGTGCTTCTTGTCAT+TGG | + | chr8.3:48281796-48281815 | None:intergenic | 50.0% | |
GAGGTTGTGGCATGTGTGTT+CGG | - | chr8.3:48279479-48279498 | MS.gene32244:CDS | 50.0% | |
GCATGTGTGTTCGGATGGAA+CGG | - | chr8.3:48279488-48279507 | MS.gene32244:CDS | 50.0% | |
GGAATGTCAGTCGGAGGTTT+AGG | - | chr8.3:48279091-48279110 | MS.gene32244:intron | 50.0% | |
GGCGAAAATCTGTTCCCGTT+TGG | - | chr8.3:48279688-48279707 | MS.gene32244:intron | 50.0% | |
GTTTGGGCCCCAAAACAGAA+GGG | - | chr8.3:48281634-48281653 | MS.gene32244:CDS | 50.0% | |
TCTCAGACATCTGATGCAGC+AGG | - | chr8.3:48280617-48280636 | MS.gene32244:CDS | 50.0% | |
TGCTGCATCAGATGTCTGAG+AGG | + | chr8.3:48280618-48280637 | None:intergenic | 50.0% | |
TGTTGTGAAGGAGGAGGAGT+GGG | + | chr8.3:48278597-48278616 | None:intergenic | 50.0% | |
TTGTGGCATGTGTGTTCGGA+TGG | - | chr8.3:48279483-48279502 | MS.gene32244:CDS | 50.0% | |
! | AAGGGGGGTTCTTTGGTGAT+TGG | - | chr8.3:48280930-48280949 | MS.gene32244:CDS | 50.0% |
! | AGATTGCTGGGCTTTGGTGT+CGG | - | chr8.3:48279740-48279759 | MS.gene32244:intron | 50.0% |
! | CCACACTCGGCTTCTGATTT+TGG | - | chr8.3:48279849-48279868 | MS.gene32244:CDS | 50.0% |
! | CGCCAATGACAAGAAGCACA+CGG | - | chr8.3:48281791-48281810 | MS.gene32244:CDS | 50.0% |
! | CGGAAAGGTGGATAGGGTTT+TGG | + | chr8.3:48278818-48278837 | None:intergenic | 50.0% |
! | GGGACTAGGAAATTGGGTTG+GGG | - | chr8.3:48279207-48279226 | MS.gene32244:intron | 50.0% |
! | GTTCTGGTGCGTGAGGTTTT+AGG | - | chr8.3:48279582-48279601 | MS.gene32244:CDS | 50.0% |
!! | CAAGGGTGCTGTGGGAATTA+AGG | - | chr8.3:48279962-48279981 | MS.gene32244:CDS | 50.0% |
!! | GCTTTGGTGTCGGTTGACAA+TGG | - | chr8.3:48279750-48279769 | MS.gene32244:CDS | 50.0% |
!! | TCTGGTGCGTGAGGTTTTAG+GGG | - | chr8.3:48279584-48279603 | MS.gene32244:CDS | 50.0% |
!! | TGTTGGTGGTGTTGTGAAGG+AGG | + | chr8.3:48278606-48278625 | None:intergenic | 50.0% |
!! | TTGCCTCTCTGATTCGGTTC+TGG | - | chr8.3:48279566-48279585 | MS.gene32244:CDS | 50.0% |
!!! | AGGTGGATAGGGTTTTGGAG+AGG | + | chr8.3:48278813-48278832 | None:intergenic | 50.0% |
!!! | TAGGGTTTTTGGTAGAGGGG+AGG | - | chr8.3:48279425-48279444 | MS.gene32244:intron | 50.0% |
CAAAGAACCCCCCTTCCATG+TGG | + | chr8.3:48280925-48280944 | None:intergenic | 55.0% | |
CACATGGAAGGGGGGTTCTT+TGG | - | chr8.3:48280923-48280942 | MS.gene32244:CDS | 55.0% | |
CAGCTGACACAACCACCTGT+GGG | + | chr8.3:48280277-48280296 | None:intergenic | 55.0% | |
CGTCGGAATTAGGTTCCCAG+GGG | + | chr8.3:48278912-48278931 | None:intergenic | 55.0% | |
CTGAATTTGGCTGTCAGGGG+CGG | - | chr8.3:48279667-48279686 | MS.gene32244:intron | 55.0% | |
GCACCAGAACCGAATCAGAG+AGG | + | chr8.3:48279572-48279591 | None:intergenic | 55.0% | |
GCGTCGGAATTAGGTTCCCA+GGG | + | chr8.3:48278913-48278932 | None:intergenic | 55.0% | |
GGAGAATGGACCTGGATCTG+AGG | + | chr8.3:48280488-48280507 | None:intergenic | 55.0% | |
GTGGAAGGAAGGAGAGGTTG+TGG | - | chr8.3:48279466-48279485 | MS.gene32244:CDS | 55.0% | |
GTGTTGTGAAGGAGGAGGAG+TGG | + | chr8.3:48278598-48278617 | None:intergenic | 55.0% | |
TGAACAGCTAGTCCCACAGG+TGG | - | chr8.3:48280262-48280281 | MS.gene32244:CDS | 55.0% | |
TGGTGAACAGCTAGTCCCAC+AGG | - | chr8.3:48280259-48280278 | MS.gene32244:CDS | 55.0% | |
TTCAGTGCCACATGGAAGGG+GGG | - | chr8.3:48280915-48280934 | MS.gene32244:CDS | 55.0% | |
!! | AAGGTGGTGGAAGGAAGGAG+AGG | - | chr8.3:48279460-48279479 | MS.gene32244:CDS | 55.0% |
!! | AGAAGTTGTGGCGTCGGTGT+CGG | + | chr8.3:48278935-48278954 | None:intergenic | 55.0% |
!! | TCTCAGGTCAAGGGTGCTGT+GGG | - | chr8.3:48279954-48279973 | MS.gene32244:CDS | 55.0% |
!! | TGATTCGGTTCTGGTGCGTG+AGG | - | chr8.3:48279575-48279594 | MS.gene32244:CDS | 55.0% |
!! | TGGTGGTGTTGTGAAGGAGG+AGG | + | chr8.3:48278603-48278622 | None:intergenic | 55.0% |
!! | TTCTCAGGTCAAGGGTGCTG+TGG | - | chr8.3:48279953-48279972 | MS.gene32244:CDS | 55.0% |
CCACAGGTGGTTGTGTCAGC+TGG | - | chr8.3:48280275-48280294 | MS.gene32244:CDS | 60.0% | |
CCAGCTGACACAACCACCTG+TGG | + | chr8.3:48280278-48280297 | None:intergenic | 60.0% | |
CGGTCAAGCCCGCAGTCAAT+AGG | - | chr8.3:48281811-48281830 | MS.gene32244:CDS | 60.0% | |
GTCGCTCTGCCAAAGCTACG+AGG | + | chr8.3:48280412-48280431 | None:intergenic | 60.0% | |
! | GGCGTCGGAATTAGGTTCCC+AGG | + | chr8.3:48278914-48278933 | None:intergenic | 60.0% |
!! | TCGGTGTCGGCGTCGGAATT+AGG | + | chr8.3:48278922-48278941 | None:intergenic | 60.0% |
GGGGCCCAAACTCGCAAAGC+AGG | + | chr8.3:48281625-48281644 | None:intergenic | 65.0% | |
!! | TGTGGCGTCGGTGTCGGCGT+CGG | + | chr8.3:48278929-48278948 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 48278514 | 48281909 | 48278514 | ID=MS.gene32244 |
chr8.3 | mRNA | 48278514 | 48281909 | 48278514 | ID=MS.gene32244.t1;Parent=MS.gene32244 |
chr8.3 | exon | 48279748 | 48281909 | 48279748 | ID=MS.gene32244.t1.exon1;Parent=MS.gene32244.t1 |
chr8.3 | CDS | 48279748 | 48281909 | 48279748 | ID=cds.MS.gene32244.t1;Parent=MS.gene32244.t1 |
chr8.3 | exon | 48279433 | 48279624 | 48279433 | ID=MS.gene32244.t1.exon2;Parent=MS.gene32244.t1 |
chr8.3 | CDS | 48279433 | 48279624 | 48279433 | ID=cds.MS.gene32244.t1;Parent=MS.gene32244.t1 |
chr8.3 | exon | 48278514 | 48279093 | 48278514 | ID=MS.gene32244.t1.exon3;Parent=MS.gene32244.t1 |
chr8.3 | CDS | 48278514 | 48279093 | 48278514 | ID=cds.MS.gene32244.t1;Parent=MS.gene32244.t1 |
Gene Sequence |
Protein sequence |