Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32822.t1 | XP_003603139.1 | 87.9 | 605 | 73 | 0 | 1 | 605 | 1 | 605 | 8.10E-227 | 796.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32822.t1 | Q96AE4 | 32.0 | 247 | 146 | 7 | 29 | 263 | 33 | 269 | 1.9e-22 | 109.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32822.t1 | G7J7L9 | 87.9 | 605 | 73 | 0 | 1 | 605 | 1 | 605 | 5.9e-227 | 796.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73791 | MS.gene32822 | PPI |
| MS.gene46269 | MS.gene32822 | PPI |
| MS.gene32822 | MS.gene03206 | PPI |
| MS.gene73790 | MS.gene32822 | PPI |
| MS.gene46271 | MS.gene32822 | PPI |
| MS.gene32822 | MS.gene013791 | PPI |
| MS.gene013796 | MS.gene32822 | PPI |
| MS.gene02577 | MS.gene32822 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32822.t1 | MTR_3g104280 | 97.521 | 605 | 15 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1130 |
| MS.gene32822.t1 | MTR_3g104270 | 97.355 | 605 | 16 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1129 |
| MS.gene32822.t1 | MTR_1g016760 | 62.754 | 639 | 144 | 17 | 1 | 587 | 1 | 597 | 0.0 | 593 |
| MS.gene32822.t1 | MTR_5g008420 | 41.699 | 518 | 225 | 23 | 82 | 563 | 181 | 657 | 6.24e-71 | 244 |
| MS.gene32822.t1 | MTR_1g090773 | 29.187 | 209 | 117 | 6 | 89 | 283 | 39 | 230 | 2.08e-11 | 66.2 |
| MS.gene32822.t1 | MTR_7g010340 | 27.675 | 542 | 256 | 27 | 68 | 560 | 95 | 549 | 5.54e-11 | 65.9 |
| MS.gene32822.t1 | MTR_7g010340 | 27.675 | 542 | 256 | 27 | 68 | 560 | 79 | 533 | 7.59e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32822.t1 | AT2G25970 | 53.266 | 597 | 181 | 26 | 26 | 586 | 66 | 600 | 1.67e-130 | 397 |
| MS.gene32822.t1 | AT1G33680 | 36.973 | 522 | 232 | 26 | 86 | 573 | 232 | 690 | 1.28e-53 | 196 |
| MS.gene32822.t1 | AT4G10070 | 43.617 | 282 | 128 | 10 | 82 | 349 | 172 | 436 | 9.16e-53 | 192 |
| MS.gene32822.t1 | AT5G04430 | 30.769 | 208 | 124 | 7 | 89 | 289 | 38 | 232 | 5.82e-14 | 73.9 |
| MS.gene32822.t1 | AT5G04430 | 31.548 | 168 | 102 | 4 | 89 | 253 | 38 | 195 | 2.86e-12 | 68.6 |
Find 233 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAGGTTGGCCTTATAAT+TGG | 0.202642 | 3.1:-82280192 | MS.gene32822:intron |
| GGTAGGGTTGGTGTTCTTAT+TGG | 0.218158 | 3.1:-82281483 | MS.gene32822:CDS |
| CAGTAGTGGGTTGGGAAGTT+TGG | 0.232400 | 3.1:+82278284 | None:intergenic |
| GACTAGGATGGTTGAACTTA+TGG | 0.236098 | 3.1:-82281370 | MS.gene32822:CDS |
| CAGAATCGTCTCAGAAATTC+AGG | 0.249484 | 3.1:-82278853 | MS.gene32822:CDS |
| AGTAGTGGGTTGGGAAGTTT+GGG | 0.253746 | 3.1:+82278285 | None:intergenic |
| AGTGCAAATCCACCTGTTTA+TGG | 0.260187 | 3.1:-82278118 | MS.gene32822:CDS |
| CTCCTCCTTTACCAATTATA+AGG | 0.261517 | 3.1:+82280181 | None:intergenic |
| TAGGCTGAAGCTGGGGCTTC+TGG | 0.266896 | 3.1:-82280376 | MS.gene32822:CDS |
| AGTTGGAAGCGTGCCCTTCT+TGG | 0.286199 | 3.1:+82278329 | None:intergenic |
| GGTTGGTAGCATAGCCTTGC+TGG | 0.287848 | 3.1:+82278257 | None:intergenic |
| ATTACTCCCACTGCCATAAC+TGG | 0.291727 | 3.1:+82278357 | None:intergenic |
| TTCTACCGGAGCACGAATTC+AGG | 0.305971 | 3.1:-82280136 | MS.gene32822:intron |
| AGACGGATGGTTGCACAATC+TGG | 0.309169 | 3.1:-82280343 | MS.gene32822:CDS |
| ACCATCCTAGTCTGAGAATT+AGG | 0.309685 | 3.1:+82281381 | None:intergenic |
| CATCCCCACACCTTATTGTT+TGG | 0.311267 | 3.1:+82280295 | None:intergenic |
| CTTTCTGTTGATGTATCACC+TGG | 0.313635 | 3.1:+82279928 | None:intergenic |
| GAAGGGCACGCTTCCAACTA+TGG | 0.327467 | 3.1:-82278325 | MS.gene32822:CDS |
| TATAATGCGCAACAACAATC+TGG | 0.353841 | 3.1:-82278430 | MS.gene32822:CDS |
| CCGGTGGATATTCCGCCAAC+TGG | 0.354362 | 3.1:-82278651 | MS.gene32822:CDS |
| TTTGCTGTTGCTGGGGTTGT+TGG | 0.358645 | 3.1:+82278566 | None:intergenic |
| TCATATGGAAATAGTTCTTA+TGG | 0.360383 | 3.1:-82277908 | MS.gene32822:CDS |
| GTTATCGGACTTGGTTCGTT+TGG | 0.360575 | 3.1:+82281605 | None:intergenic |
| AACTTCTTGAGCTCGTTGTT+TGG | 0.361408 | 3.1:+82281677 | None:intergenic |
| GAAGCTGGGGCTTCTGGCGG+TGG | 0.361827 | 3.1:-82280370 | MS.gene32822:CDS |
| TTTGCTGATTCAATTTGATC+AGG | 0.363459 | 3.1:+82279883 | None:intergenic |
| GATTCAAGTTACTCGTGATA+TGG | 0.369842 | 3.1:-82281412 | MS.gene32822:CDS |
| CCATAGGCCGCTTGGGAGGT+AGG | 0.372582 | 3.1:+82278199 | None:intergenic |
| TTTATTAACTAGGCTGAAGC+TGG | 0.373039 | 3.1:-82280385 | MS.gene32822:intron |
| CGGAGCACCGTTATCGGACT+TGG | 0.374382 | 3.1:+82281596 | None:intergenic |
| GATGCAAATACCAAACAATA+AGG | 0.377129 | 3.1:-82280305 | MS.gene32822:intron |
| TTATCGGACTTGGTTCGTTT+GGG | 0.378392 | 3.1:+82281606 | None:intergenic |
| GAGTTCGATGTCCGTGGCGG+TGG | 0.387307 | 3.1:+82281713 | None:intergenic |
| TGTTGCTGATCATATGTTTG+TGG | 0.391746 | 3.1:+82278397 | None:intergenic |
| GGTCCTTCACAGCCAGCTGA+TGG | 0.395783 | 3.1:-82278535 | MS.gene32822:CDS |
| GGCCAGACTCCGCCGTCATA+TGG | 0.396618 | 3.1:-82277923 | MS.gene32822:CDS |
| GTTGGTGTTCTTATTGGTAA+AGG | 0.399271 | 3.1:-82281477 | MS.gene32822:CDS |
| CCTACCTCCCAAGCGGCCTA+TGG | 0.399491 | 3.1:-82278199 | MS.gene32822:CDS |
| GATAACGGTGCTCCGCAATC+AGG | 0.402443 | 3.1:-82281588 | MS.gene32822:CDS |
| CCCCAGCAACAGCAAAATCC+TGG | 0.404109 | 3.1:-82278559 | MS.gene32822:CDS |
| TTCCATATGACGGCGGAGTC+TGG | 0.406065 | 3.1:+82277921 | None:intergenic |
| AGTCAACCACAGTCTGGTTA+TGG | 0.407882 | 3.1:-82278175 | MS.gene32822:CDS |
| GTTGGAAGCGTGCCCTTCTT+GGG | 0.411122 | 3.1:+82278330 | None:intergenic |
| TATGATCAGCAACAAGGTTA+TGG | 0.411167 | 3.1:-82278388 | MS.gene32822:CDS |
| CAAGGTGGCCAGCCTGGCTA+TGG | 0.413475 | 3.1:-82277944 | MS.gene32822:CDS |
| AATCCCGACCACCGTCTAGC+TGG | 0.415564 | 3.1:-82278798 | MS.gene32822:CDS |
| CATAGGCCGCTTGGGAGGTA+GGG | 0.417451 | 3.1:+82278200 | None:intergenic |
| ACTAGGATGGTTGAACTTAT+GGG | 0.418819 | 3.1:-82281369 | MS.gene32822:CDS |
| AACTGCACAGGCTGTTCCAC+AGG | 0.420141 | 3.1:-82277843 | MS.gene32822:CDS |
| TATGGCTCTGCTCCCAGTTA+TGG | 0.425707 | 3.1:-82278370 | MS.gene32822:CDS |
| AGCCAACCAGGACAGGGTTA+TGG | 0.429254 | 3.1:-82278472 | MS.gene32822:CDS |
| CTGGTTGAGGAGTTCCTTGT+TGG | 0.431801 | 3.1:+82278236 | None:intergenic |
| GAAGCGTGCCCTTCTTGGGT+TGG | 0.433826 | 3.1:+82278334 | None:intergenic |
| TGGTTATAGCCAACCAGGAC+AGG | 0.437107 | 3.1:-82278479 | MS.gene32822:CDS |
| TAGTGGGTTGGGAAGTTTGG+GGG | 0.438776 | 3.1:+82278287 | None:intergenic |
| CTGGGCAACAGTAGTGGGTT+GGG | 0.439592 | 3.1:+82278276 | None:intergenic |
| GCTTGTTGCACAGGAGCAGC+AGG | 0.441689 | 3.1:+82278769 | None:intergenic |
| GCTCCTCAAGGTGGCCAGCC+TGG | 0.443253 | 3.1:-82277950 | MS.gene32822:CDS |
| TCTTGACCATAACCCTGTCC+TGG | 0.444195 | 3.1:+82278466 | None:intergenic |
| GACGGATGGTTGCACAATCT+GGG | 0.446354 | 3.1:-82280342 | MS.gene32822:CDS |
| GTTGACTTCCATAGGCCGCT+TGG | 0.454305 | 3.1:+82278191 | None:intergenic |
| AGCCCAGCTAGACGGTGGTC+GGG | 0.454864 | 3.1:+82278795 | None:intergenic |
| AGTGGGTTGGGAAGTTTGGG+GGG | 0.456628 | 3.1:+82278288 | None:intergenic |
| GTCCTTCACAGCCAGCTGAT+GGG | 0.456888 | 3.1:-82278534 | MS.gene32822:CDS |
| TTGACTTCCATAGGCCGCTT+GGG | 0.461597 | 3.1:+82278192 | None:intergenic |
| AGCTAGACGGTGGTCGGGAT+TGG | 0.461750 | 3.1:+82278800 | None:intergenic |
| AATTGAATCAGCAAAGCAAT+TGG | 0.464801 | 3.1:-82279875 | MS.gene32822:CDS |
| AAGTATCTTCAGATGCAATC+TGG | 0.464861 | 3.1:-82281441 | MS.gene32822:CDS |
| CCTGTGCAACAAGCTGGTTA+TGG | 0.465420 | 3.1:-82278760 | MS.gene32822:CDS |
| AGAACACCAACCCTACCATT+AGG | 0.466222 | 3.1:+82281489 | None:intergenic |
| TACAGTCAACCTCCTTCCTC+TGG | 0.467231 | 3.1:-82278499 | MS.gene32822:CDS |
| TGATTGCGGAGCACCGTTAT+CGG | 0.468350 | 3.1:+82281590 | None:intergenic |
| TTATGGTGCTGGTTATGCTC+AGG | 0.470224 | 3.1:-82277891 | MS.gene32822:CDS |
| GGAAATAGTTCTTATGGTGC+TGG | 0.472518 | 3.1:-82277902 | MS.gene32822:CDS |
| TTGCTGATTCAATTTGATCA+GGG | 0.472599 | 3.1:+82279884 | None:intergenic |
| TCGCAGCAAGGTGGTAGTTA+TGG | 0.474269 | 3.1:-82281534 | MS.gene32822:CDS |
| AAGAAGATTGAAATACCTAA+TGG | 0.476293 | 3.1:-82281504 | MS.gene32822:CDS |
| GTTGGCCTTATAATTGGTAA+AGG | 0.477296 | 3.1:-82280186 | MS.gene32822:CDS |
| GGCGGAGTCTGGCCATAGCC+AGG | 0.479964 | 3.1:+82277932 | None:intergenic |
| GACCCATCAGCTGGCTGTGA+AGG | 0.481746 | 3.1:+82278532 | None:intergenic |
| GGTTATGGCTATGGGCAACC+TGG | 0.488138 | 3.1:-82278745 | MS.gene32822:CDS |
| GAGTCTGGCCATAGCCAGGC+TGG | 0.490778 | 3.1:+82277936 | None:intergenic |
| CAACAAGCTGGTTATGGCTA+TGG | 0.490845 | 3.1:-82278754 | MS.gene32822:CDS |
| GCTGAGCATACCCAGAAGGC+GGG | 0.493910 | 3.1:+82278032 | None:intergenic |
| CCATAACCAGCTTGTTGCAC+AGG | 0.496256 | 3.1:+82278760 | None:intergenic |
| CTTCTGGCGGTGGCACTAGA+CGG | 0.497957 | 3.1:-82280360 | MS.gene32822:CDS |
| GATGGACCAGAGTATGATCC+AGG | 0.501151 | 3.1:+82278727 | None:intergenic |
| TTCTGTTGATGTATCACCTG+GGG | 0.507849 | 3.1:+82279930 | None:intergenic |
| GTAGTGGGTTGGGAAGTTTG+GGG | 0.508308 | 3.1:+82278286 | None:intergenic |
| CCCAGCAACAGCAAAATCCT+GGG | 0.508607 | 3.1:-82278558 | MS.gene32822:CDS |
| GTTGGTAGCATAGCCTTGCT+GGG | 0.508853 | 3.1:+82278258 | None:intergenic |
| GGTGAGATGGTGCAGTGGAT+TGG | 0.508922 | 3.1:+82278626 | None:intergenic |
| CCTAGCACAGCAGGAGGCTA+TGG | 0.510304 | 3.1:-82278082 | MS.gene32822:CDS |
| CTGCTCCCAGTTATGGCAGT+GGG | 0.512052 | 3.1:-82278363 | MS.gene32822:CDS |
| GACTGTGATTGACCATAAAC+AGG | 0.513068 | 3.1:+82278106 | None:intergenic |
| TCAGCAGAAGAAACAGCATC+AGG | 0.513260 | 3.1:+82281342 | None:intergenic |
| TATGGAAGTCAACCACAGTC+TGG | 0.513429 | 3.1:-82278181 | MS.gene32822:CDS |
| CCATAGCCTCCTGCTGTGCT+AGG | 0.513919 | 3.1:+82278082 | None:intergenic |
| TGCTGATTCAATTTGATCAG+GGG | 0.517465 | 3.1:+82279885 | None:intergenic |
| GCTGCTCCTGTGCAACAAGC+TGG | 0.519086 | 3.1:-82278766 | MS.gene32822:CDS |
| CTTGGTTCGTTTGGGATCGT+AGG | 0.519590 | 3.1:+82281614 | None:intergenic |
| GAAATACCTAATGGTAGGGT+TGG | 0.520361 | 3.1:-82281495 | MS.gene32822:CDS |
| TCACAGTCACCTAGCACAGC+AGG | 0.521102 | 3.1:-82278091 | MS.gene32822:CDS |
| GCTCTCTGAGTGCCTAACTC+TGG | 0.522190 | 3.1:+82278010 | None:intergenic |
| CCAGTTGGCGGAATATCCAC+CGG | 0.522965 | 3.1:+82278651 | None:intergenic |
| GACCATAACCCTGTCCTGGT+TGG | 0.526303 | 3.1:+82278470 | None:intergenic |
| ATAGGCCGCTTGGGAGGTAG+GGG | 0.527994 | 3.1:+82278201 | None:intergenic |
| GCCTTGCTGGGCAACAGTAG+TGG | 0.528254 | 3.1:+82278270 | None:intergenic |
| GGGTATGCTCAGCCAGAGTT+AGG | 0.529419 | 3.1:-82278022 | MS.gene32822:CDS |
| GCACCAGTGCAACCAGGGTA+TGG | 0.529757 | 3.1:-82277989 | MS.gene32822:CDS |
| ATCTGCTTGTGATCCATAGT+TGG | 0.529858 | 3.1:+82278312 | None:intergenic |
| AGTTCGATGTCCGTGGCGGT+GGG | 0.530955 | 3.1:+82281714 | None:intergenic |
| ATCCCGACCACCGTCTAGCT+GGG | 0.531596 | 3.1:-82278797 | MS.gene32822:CDS |
| TATCCACCGGGTTGCTGAGG+AGG | 0.532429 | 3.1:+82278664 | None:intergenic |
| GGGAGTAATCCAACCCAAGA+AGG | 0.532914 | 3.1:-82278343 | MS.gene32822:CDS |
| GAGCCCAGCTAGACGGTGGT+CGG | 0.534258 | 3.1:+82278794 | None:intergenic |
| GAGGGAGGAGCACCATAGCT+AGG | 0.535314 | 3.1:+82278151 | None:intergenic |
| AGTGGATTGGTCCCAGTTGG+CGG | 0.535684 | 3.1:+82278639 | None:intergenic |
| GGTGTTCTTATTGGTAAAGG+AGG | 0.535918 | 3.1:-82281474 | MS.gene32822:CDS |
| GCTGAAGCTGGGGCTTCTGG+CGG | 0.536744 | 3.1:-82280373 | MS.gene32822:CDS |
| AACAAGCTGGTTATGGCTAT+GGG | 0.538613 | 3.1:-82278753 | MS.gene32822:CDS |
| GCAGGAGGAGCCCAGCTAGA+CGG | 0.538714 | 3.1:+82278787 | None:intergenic |
| CACCAGCAGTCTACTCATGC+AGG | 0.540059 | 3.1:-82278607 | MS.gene32822:CDS |
| TAAACAGGTGGATTTGCACT+TGG | 0.540765 | 3.1:+82278121 | None:intergenic |
| TTATTAACTAGGCTGAAGCT+GGG | 0.541792 | 3.1:-82280384 | MS.gene32822:intron |
| TCTGCTCCCAGTTATGGCAG+TGG | 0.543356 | 3.1:-82278364 | MS.gene32822:CDS |
| ATGCCTCAGCCACCATATGC+AGG | 0.544233 | 3.1:-82278691 | MS.gene32822:CDS |
| GCTGGGCAACAGTAGTGGGT+TGG | 0.546458 | 3.1:+82278275 | None:intergenic |
| GCTCGTCTTCTCAGCGTCAC+CGG | 0.548114 | 3.1:-82281651 | MS.gene32822:CDS |
| TTTCTGTTGATGTATCACCT+GGG | 0.548846 | 3.1:+82279929 | None:intergenic |
| CTGATCCTAATTCTCAGACT+AGG | 0.549418 | 3.1:-82281386 | MS.gene32822:CDS |
| TGAGGAGGATAGCCTGCATA+TGG | 0.549695 | 3.1:+82278679 | None:intergenic |
| CAGAGAGCACCAGTGCAACC+AGG | 0.550434 | 3.1:-82277995 | MS.gene32822:CDS |
| TGAGCATACCCAGAAGGCGG+GGG | 0.550683 | 3.1:+82278034 | None:intergenic |
| TTGAGGAGTTCCTTGTTGGT+TGG | 0.551933 | 3.1:+82278240 | None:intergenic |
| AAGAGTATGCAAGCTTCTAC+CGG | 0.552343 | 3.1:-82280150 | MS.gene32822:CDS |
| TAGCGATGGAGCAACTGCAC+AGG | 0.553254 | 3.1:-82277855 | MS.gene32822:CDS |
| TAGCCTGCATATGGTGGCTG+AGG | 0.553849 | 3.1:+82278688 | None:intergenic |
| GGACCATACCCTGGTTGCAC+TGG | 0.555058 | 3.1:+82277986 | None:intergenic |
| GGCTATCCTCCTCAGCAACC+CGG | 0.555442 | 3.1:-82278670 | MS.gene32822:CDS |
| AGATTGAAATACCTAATGGT+AGG | 0.556097 | 3.1:-82281500 | MS.gene32822:CDS |
| AAACGAACCAAGTCCGATAA+CGG | 0.556846 | 3.1:-82281603 | MS.gene32822:CDS |
| TAGCCAGGCTGGCCACCTTG+AGG | 0.557256 | 3.1:+82277947 | None:intergenic |
| TTGGTTAATCAAATCCTCAC+TGG | 0.558998 | 3.1:-82279856 | MS.gene32822:CDS |
| TCCTCTGGTTATAGCCAACC+AGG | 0.559096 | 3.1:-82278484 | MS.gene32822:CDS |
| GCGCAACAACAATCTGGGTA+TGG | 0.561377 | 3.1:-82278424 | MS.gene32822:CDS |
| CGGTGGATATTCCGCCAACT+GGG | 0.563001 | 3.1:-82278650 | MS.gene32822:CDS |
| CAATCATACGGTGCTCCTCA+AGG | 0.564374 | 3.1:-82277962 | MS.gene32822:CDS |
| CTCAGAAATTCAGGGAACTC+AGG | 0.566464 | 3.1:-82278844 | MS.gene32822:CDS |
| GAGAACCTGAATTCGTGCTC+CGG | 0.566604 | 3.1:+82280131 | None:intergenic |
| GCTCCATCGCTAGCATACGC+TGG | 0.567046 | 3.1:+82277866 | None:intergenic |
| TCTGGTTATGGACCTAGCTA+TGG | 0.569183 | 3.1:-82278163 | MS.gene32822:CDS |
| CTGTATGCAGACCCATCAGC+TGG | 0.570591 | 3.1:+82278523 | None:intergenic |
| GGGTATGGTCCGCAATCATA+CGG | 0.574711 | 3.1:-82277974 | MS.gene32822:CDS |
| GGCCTTATAATTGGTAAAGG+AGG | 0.574874 | 3.1:-82280183 | MS.gene32822:CDS |
| GTAGGAGAGTGGTGGAGCGC+CGG | 0.574920 | 3.1:+82281632 | None:intergenic |
| CCTTGCTGGGCAACAGTAGT+GGG | 0.574987 | 3.1:+82278271 | None:intergenic |
| AGAATCGTCTCAGAAATTCA+GGG | 0.575702 | 3.1:-82278852 | MS.gene32822:CDS |
| GCTCCAGCGTATGCTAGCGA+TGG | 0.580238 | 3.1:-82277869 | MS.gene32822:CDS |
| GGCTGAGCATACCCAGAAGG+CGG | 0.581423 | 3.1:+82278031 | None:intergenic |
| GGCATGTTATACTGCGGTGA+TGG | 0.581623 | 3.1:+82278709 | None:intergenic |
| GAATATCCACCGGGTTGCTG+AGG | 0.583120 | 3.1:+82278661 | None:intergenic |
| ATAACGGTGCTCCGCAATCA+GGG | 0.583366 | 3.1:-82281587 | MS.gene32822:CDS |
| TGCAGTGGATTGGTCCCAGT+TGG | 0.583764 | 3.1:+82278636 | None:intergenic |
| GTAGGGGCTACCGCATAACC+TGG | 0.584297 | 3.1:+82278217 | None:intergenic |
| GATTGAAATACCTAATGGTA+GGG | 0.585821 | 3.1:-82281499 | MS.gene32822:CDS |
| TGTTGCACAGGAGCAGCAGG+AGG | 0.586770 | 3.1:+82278772 | None:intergenic |
| GGGCAACCTGGATCATACTC+TGG | 0.588895 | 3.1:-82278733 | MS.gene32822:CDS |
| TGGCGGTGGCACTAGACGGA+TGG | 0.589779 | 3.1:-82280356 | MS.gene32822:CDS |
| CCCACTACTGTTGCCCAGCA+AGG | 0.593544 | 3.1:-82278271 | MS.gene32822:CDS |
| TTACTCCCACTGCCATAACT+GGG | 0.595665 | 3.1:+82278358 | None:intergenic |
| ATAATGCGCAACAACAATCT+GGG | 0.598425 | 3.1:-82278429 | MS.gene32822:CDS |
| CGTTTGGGATCGTAGGAGAG+TGG | 0.599323 | 3.1:+82281621 | None:intergenic |
| ACGGATGGTTGCACAATCTG+GGG | 0.600123 | 3.1:-82280341 | MS.gene32822:CDS |
| CACCTGCATGAGTAGACTGC+TGG | 0.604282 | 3.1:+82278605 | None:intergenic |
| CATCAATGAGGTCCTTGCTG+AGG | 0.607914 | 3.1:-82281313 | MS.gene32822:intron |
| TAAGAACTATTTCCATATGA+CGG | 0.608805 | 3.1:+82277911 | None:intergenic |
| TCCTAATTCTCAGACTAGGA+TGG | 0.609354 | 3.1:-82281382 | MS.gene32822:CDS |
| TGAGTAGACTGCTGGTGAGA+TGG | 0.609532 | 3.1:+82278613 | None:intergenic |
| GGTTATAGCCAACCAGGACA+GGG | 0.609709 | 3.1:-82278478 | MS.gene32822:CDS |
| CAGTTGGCGGAATATCCACC+GGG | 0.609806 | 3.1:+82278652 | None:intergenic |
| CCACCTTGCTGCGAGTATTG+CGG | 0.611213 | 3.1:+82281543 | None:intergenic |
| GGAGTAATCCAACCCAAGAA+GGG | 0.613412 | 3.1:-82278342 | MS.gene32822:CDS |
| AACTCCTCAACCAGGTTATG+CGG | 0.616557 | 3.1:-82278227 | MS.gene32822:CDS |
| TTGGGATCGTAGGAGAGTGG+TGG | 0.618282 | 3.1:+82281624 | None:intergenic |
| GCTACCGCATAACCTGGTTG+AGG | 0.618491 | 3.1:+82278223 | None:intergenic |
| GGAGGAGCCCAGCTAGACGG+TGG | 0.623688 | 3.1:+82278790 | None:intergenic |
| AGACTGTGGTTGACTTCCAT+AGG | 0.624998 | 3.1:+82278183 | None:intergenic |
| TAATCAAATCCTCACTGGTG+AGG | 0.625790 | 3.1:-82279851 | MS.gene32822:intron |
| CAACAAGGAACTCCTCAACC+AGG | 0.626608 | 3.1:-82278235 | MS.gene32822:CDS |
| TCTGTTGATGTATCACCTGG+GGG | 0.627155 | 3.1:+82279931 | None:intergenic |
| CTGAGCATACCCAGAAGGCG+GGG | 0.628553 | 3.1:+82278033 | None:intergenic |
| GGTTATGGTCAAGAAAGCTA+TGG | 0.629248 | 3.1:-82278457 | MS.gene32822:CDS |
| ACTTCCATAGGCCGCTTGGG+AGG | 0.629551 | 3.1:+82278195 | None:intergenic |
| TATGATTGCGGACCATACCC+TGG | 0.630591 | 3.1:+82277977 | None:intergenic |
| TCCTGGTTGGCTATAACCAG+AGG | 0.630777 | 3.1:+82278483 | None:intergenic |
| GGAGGATAGCCTGCATATGG+TGG | 0.632205 | 3.1:+82278682 | None:intergenic |
| TGCTGAGAAACTCATCAATG+AGG | 0.634906 | 3.1:-82281325 | MS.gene32822:CDS |
| GACTTCGAGTTCGATGTCCG+TGG | 0.636506 | 3.1:+82281707 | None:intergenic |
| GGCTATGCTACCAACCAACA+AGG | 0.638622 | 3.1:-82278250 | MS.gene32822:CDS |
| TGAGGAGCACCGTATGATTG+CGG | 0.639312 | 3.1:+82277965 | None:intergenic |
| CAAACATATGATCAGCAACA+AGG | 0.642194 | 3.1:-82278394 | MS.gene32822:CDS |
| TATTAACTAGGCTGAAGCTG+GGG | 0.642830 | 3.1:-82280383 | MS.gene32822:intron |
| TCAGGTGGCTATACTCAGCA+AGG | 0.643161 | 3.1:-82278826 | MS.gene32822:CDS |
| CGATGAACAACCCACCGCCA+CGG | 0.645490 | 3.1:-82281724 | MS.gene32822:CDS |
| AAGCCGCAATACTCGCAGCA+AGG | 0.647111 | 3.1:-82281546 | MS.gene32822:CDS |
| TAAGAATCAAACCCTGATTG+CGG | 0.648437 | 3.1:+82281576 | None:intergenic |
| AGAGAGCACCAGTGCAACCA+GGG | 0.650050 | 3.1:-82277994 | MS.gene32822:CDS |
| ACTGCACAGGCTGTTCCACA+GGG | 0.651647 | 3.1:-82277842 | MS.gene32822:CDS |
| GGTTGGCTATAACCAGAGGA+AGG | 0.652858 | 3.1:+82278487 | None:intergenic |
| CCAAGAAACAAACCTCAGCA+AGG | 0.654175 | 3.1:+82281301 | None:intergenic |
| TCTGGCTGAGCATACCCAGA+AGG | 0.654308 | 3.1:+82278028 | None:intergenic |
| TGGCTATAACCAGAGGAAGG+AGG | 0.658440 | 3.1:+82278490 | None:intergenic |
| AGAAATTCAGGGAACTCAGG+TGG | 0.658761 | 3.1:-82278841 | MS.gene32822:CDS |
| CGGATGGTTGCACAATCTGG+GGG | 0.666739 | 3.1:-82280340 | MS.gene32822:CDS |
| CCAGCAACAGCAAAATCCTG+GGG | 0.670269 | 3.1:-82278557 | MS.gene32822:CDS |
| CAGTCACCTAGCACAGCAGG+AGG | 0.674325 | 3.1:-82278088 | MS.gene32822:CDS |
| TTCGAGTTCGATGTCCGTGG+CGG | 0.677834 | 3.1:+82281710 | None:intergenic |
| CAGCAGTCTACTCATGCAGG+TGG | 0.682332 | 3.1:-82278604 | MS.gene32822:CDS |
| CTGCTGGTGAGATGGTGCAG+TGG | 0.682356 | 3.1:+82278621 | None:intergenic |
| ACTTTAGCAACACCGCCCTG+TGG | 0.690074 | 3.1:+82277827 | None:intergenic |
| CCGCAATACTCGCAGCAAGG+TGG | 0.697265 | 3.1:-82281543 | MS.gene32822:CDS |
| TGTGATTGACCATAAACAGG+TGG | 0.715400 | 3.1:+82278109 | None:intergenic |
| TATCCTCCTCAGCAACCCGG+TGG | 0.720805 | 3.1:-82278667 | MS.gene32822:CDS |
| CTAGGTCCATAACCAGACTG+TGG | 0.724556 | 3.1:+82278169 | None:intergenic |
| GCACAGGCTGTTCCACAGGG+CGG | 0.725045 | 3.1:-82277839 | MS.gene32822:CDS |
| GGTGACGCTGAGAAGACGAG+CGG | 0.728767 | 3.1:+82281653 | None:intergenic |
| GAACTATTTCCATATGACGG+CGG | 0.728848 | 3.1:+82277914 | None:intergenic |
| CAGCAACAGCAAAATCCTGG+GGG | 0.736266 | 3.1:-82278556 | MS.gene32822:CDS |
| TCATACGGTGCTCCTCAAGG+TGG | 0.736772 | 3.1:-82277959 | MS.gene32822:CDS |
| GGCTGAGGCATGTTATACTG+CGG | 0.750903 | 3.1:+82278703 | None:intergenic |
| GATAACATACCTCACCAGTG+AGG | 0.751081 | 3.1:+82279842 | None:intergenic |
| GGTAGCCCCTACCTCCCAAG+CGG | 0.751590 | 3.1:-82278206 | MS.gene32822:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATTAATCAAATTATTAT+CGG | + | chr3.1:82278322-82278341 | None:intergenic | 10.0% |
| !!! | AAATTATGACTAATTTTTAT+TGG | - | chr3.1:82280569-82280588 | MS.gene32822:intron | 10.0% |
| !!! | CTTTTTTAAGTTTAAAATTA+TGG | - | chr3.1:82279811-82279830 | MS.gene32822:intron | 10.0% |
| !!! | TTTTAAACTTAAAAAAGATT+TGG | + | chr3.1:82279808-82279827 | None:intergenic | 10.0% |
| !! | AAATTCACTTTCAATTATAA+TGG | - | chr3.1:82280350-82280369 | MS.gene32822:CDS | 15.0% |
| !!! | AAAAGGTCAATAATTTTATA+AGG | + | chr3.1:82279893-82279912 | None:intergenic | 15.0% |
| !!! | AAAATGAATAACAATTTTGT+AGG | + | chr3.1:82279926-82279945 | None:intergenic | 15.0% |
| !! | AAAGAACATTAAAAATCGAT+GGG | - | chr3.1:82279667-82279686 | MS.gene32822:intron | 20.0% |
| !! | ATTGAAAGTGAATTTAACAT+AGG | + | chr3.1:82280345-82280364 | None:intergenic | 20.0% |
| !! | TAATCAATGATATTTCACTA+AGG | + | chr3.1:82278484-82278503 | None:intergenic | 20.0% |
| !! | TATATTATAGTTACAGAATC+AGG | + | chr3.1:82279086-82279105 | None:intergenic | 20.0% |
| !! | TTTAATCCTAAAACTAAACA+TGG | + | chr3.1:82279845-82279864 | None:intergenic | 20.0% |
| !!! | ACACATTTTTTTGTTTTATC+TGG | - | chr3.1:82279758-82279777 | MS.gene32822:intron | 20.0% |
| !!! | CTAATATCATCAATTTTTTC+AGG | - | chr3.1:82279605-82279624 | MS.gene32822:intron | 20.0% |
| !!! | CTTCGTATATTTTTATGTTT+TGG | - | chr3.1:82280650-82280669 | MS.gene32822:intron | 20.0% |
| !!! | TTATAACCATGTTTAGTTTT+AGG | - | chr3.1:82279836-82279855 | MS.gene32822:intron | 20.0% |
| !!! | TTTTATTTCATAGTTTGTTG+AGG | - | chr3.1:82280397-82280416 | MS.gene32822:intron | 20.0% |
| ! | AAGAAGATTGAAATACCTAA+TGG | - | chr3.1:82278072-82278091 | MS.gene32822:CDS | 25.0% |
| ! | GAAAGAACATTAAAAATCGA+TGG | - | chr3.1:82279666-82279685 | MS.gene32822:intron | 25.0% |
| ! | GTGATTTCAAAACATGAATT+GGG | + | chr3.1:82278450-82278469 | None:intergenic | 25.0% |
| ! | TAAAATTAGACAACACTTTG+AGG | - | chr3.1:82280111-82280130 | MS.gene32822:intron | 25.0% |
| ! | TAAATATGCTCAAATGATGT+TGG | - | chr3.1:82279120-82279139 | MS.gene32822:intron | 25.0% |
| ! | TAAGAACTATTTCCATATGA+CGG | + | chr3.1:82281668-82281687 | None:intergenic | 25.0% |
| ! | TCAACAAGTCAAAATTCAAA+AGG | + | chr3.1:82280075-82280094 | None:intergenic | 25.0% |
| ! | TCATATGGAAATAGTTCTTA+TGG | - | chr3.1:82281668-82281687 | MS.gene32822:CDS | 25.0% |
| ! | TGTGATTTCAAAACATGAAT+TGG | + | chr3.1:82278451-82278470 | None:intergenic | 25.0% |
| ! | TTGGTGAAACATTCATTAAT+AGG | - | chr3.1:82278868-82278887 | MS.gene32822:intron | 25.0% |
| !! | CTAATTTTTATTGGCATCAA+CGG | - | chr3.1:82280578-82280597 | MS.gene32822:intron | 25.0% |
| !! | TAATTTTTATTGGCATCAAC+GGG | - | chr3.1:82280579-82280598 | MS.gene32822:intron | 25.0% |
| !! | TTGAAGTATTTCTTATCGTT+GGG | - | chr3.1:82280243-82280262 | MS.gene32822:intron | 25.0% |
| !!! | ATACGTGTTGTTTATTAACT+AGG | - | chr3.1:82279181-82279200 | MS.gene32822:intron | 25.0% |
| !!! | ATTTTTATGTTTTGGTACGT+TGG | - | chr3.1:82280658-82280677 | MS.gene32822:intron | 25.0% |
| !!! | CAAAGTGTTGTCTAATTTTA+TGG | + | chr3.1:82280111-82280130 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTATTCTCGTTT+GGG | - | chr3.1:82279338-82279357 | MS.gene32822:intron | 25.0% |
| !!! | TTTATCTGGCTTATCATTTT+TGG | - | chr3.1:82279772-82279791 | MS.gene32822:intron | 25.0% |
| !!! | TTTTTATGTTTTGGTACGTT+GGG | - | chr3.1:82280659-82280678 | MS.gene32822:intron | 25.0% |
| AAATACCAAACAATAAGGTG+TGG | - | chr3.1:82279276-82279295 | MS.gene32822:intron | 30.0% | |
| AATACCAAACAATAAGGTGT+GGG | - | chr3.1:82279277-82279296 | MS.gene32822:intron | 30.0% | |
| AATAGATGTACACACAAAAC+GGG | + | chr3.1:82280629-82280648 | None:intergenic | 30.0% | |
| AATCGACAGAAATACACAAA+TGG | + | chr3.1:82280205-82280224 | None:intergenic | 30.0% | |
| AATTGAATCAGCAAAGCAAT+TGG | - | chr3.1:82279701-82279720 | MS.gene32822:intron | 30.0% | |
| ACTGTAATTGTTACTAGTCA+GGG | - | chr3.1:82278355-82278374 | MS.gene32822:CDS | 30.0% | |
| AGATTGAAATACCTAATGGT+AGG | - | chr3.1:82278076-82278095 | MS.gene32822:CDS | 30.0% | |
| ATTGTCTCTATTTATGTTCC+TGG | - | chr3.1:82280144-82280163 | MS.gene32822:CDS | 30.0% | |
| CAATAGATGTACACACAAAA+CGG | + | chr3.1:82280630-82280649 | None:intergenic | 30.0% | |
| CTCAAATGATGTTTCAATGA+CGG | - | chr3.1:82278693-82278712 | MS.gene32822:CDS | 30.0% | |
| GAGAATTGTTTCAATGTACT+TGG | - | chr3.1:82280453-82280472 | MS.gene32822:intron | 30.0% | |
| GATGCAAATACCAAACAATA+AGG | - | chr3.1:82279271-82279290 | MS.gene32822:intron | 30.0% | |
| GATTGAAATACCTAATGGTA+GGG | - | chr3.1:82278077-82278096 | MS.gene32822:CDS | 30.0% | |
| TACTGTAATTGTTACTAGTC+AGG | - | chr3.1:82278354-82278373 | MS.gene32822:CDS | 30.0% | |
| TCATATGCTCAACTTTCATT+TGG | - | chr3.1:82280266-82280285 | MS.gene32822:intron | 30.0% | |
| TCTAATCTTGCACAATTTCA+TGG | - | chr3.1:82278813-82278832 | MS.gene32822:CDS | 30.0% | |
| TGAGTTATCATGGTTTCATT+TGG | + | chr3.1:82280012-82280031 | None:intergenic | 30.0% | |
| TGCTCAAATGATGTTGAAAT+TGG | - | chr3.1:82278595-82278614 | MS.gene32822:CDS | 30.0% | |
| TTAATGAATGTTTCACCAAG+AGG | + | chr3.1:82278867-82278886 | None:intergenic | 30.0% | |
| TTACTCACTAGAGCAAATAT+GGG | + | chr3.1:82280518-82280537 | None:intergenic | 30.0% | |
| TTGATAAATCATAGCTACTG+CGG | + | chr3.1:82280044-82280063 | None:intergenic | 30.0% | |
| TTGTAGGAACTAAACTCAAA+AGG | + | chr3.1:82279910-82279929 | None:intergenic | 30.0% | |
| TTTACTCACTAGAGCAAATA+TGG | + | chr3.1:82280519-82280538 | None:intergenic | 30.0% | |
| ! | CTGATTTGATAACTGTAGTA+TGG | - | chr3.1:82278517-82278536 | MS.gene32822:CDS | 30.0% |
| ! | CTTGAAGTATTTCTTATCGT+TGG | - | chr3.1:82280242-82280261 | MS.gene32822:intron | 30.0% |
| !! | GTGCTCATATTTTTACAGTA+TGG | - | chr3.1:82279973-82279992 | MS.gene32822:intron | 30.0% |
| !! | TTGCTGATTCAATTTGATCA+GGG | + | chr3.1:82279695-82279714 | None:intergenic | 30.0% |
| !! | TTTGCTGATTCAATTTGATC+AGG | + | chr3.1:82279696-82279715 | None:intergenic | 30.0% |
| !!! | ATTTGGCATAGTTTTATCCT+TGG | - | chr3.1:82280283-82280302 | MS.gene32822:intron | 30.0% |
| !!! | CTAGTTCGCTTTTTAATTTG+TGG | - | chr3.1:82280682-82280701 | MS.gene32822:intron | 30.0% |
| !!! | GAGCACCTTATTTTTACAAA+AGG | + | chr3.1:82279959-82279978 | None:intergenic | 30.0% |
| !!! | GTGTTTTGTTTATTCTCGTT+TGG | - | chr3.1:82279337-82279356 | MS.gene32822:intron | 30.0% |
| !!! | TTTGGCATAGTTTTATCCTT+GGG | - | chr3.1:82280284-82280303 | MS.gene32822:intron | 30.0% |
| AAGTATCTTCAGATGCAATC+TGG | - | chr3.1:82278135-82278154 | MS.gene32822:CDS | 35.0% | |
| AATATGAAATCCAAGTCGTC+GGG | + | chr3.1:82279570-82279589 | None:intergenic | 35.0% | |
| ACTAGGATGGTTGAACTTAT+GGG | - | chr3.1:82278207-82278226 | MS.gene32822:CDS | 35.0% | |
| AGAATCGTCTCAGAAATTCA+GGG | - | chr3.1:82280724-82280743 | MS.gene32822:intron | 35.0% | |
| ATAATGCGCAACAACAATCT+GGG | - | chr3.1:82281147-82281166 | MS.gene32822:intron | 35.0% | |
| ATACCAAACAATAAGGTGTG+GGG | - | chr3.1:82279278-82279297 | MS.gene32822:intron | 35.0% | |
| ATGACTGTAACTTTACCTCT+TGG | - | chr3.1:82278849-82278868 | MS.gene32822:CDS | 35.0% | |
| CAAACATATGATCAGCAACA+AGG | - | chr3.1:82281182-82281201 | MS.gene32822:intron | 35.0% | |
| CAGTCAGATACAACAAAATC+AGG | + | chr3.1:82278632-82278651 | None:intergenic | 35.0% | |
| CTCCTCCTTTACCAATTATA+AGG | + | chr3.1:82279398-82279417 | None:intergenic | 35.0% | |
| CTGTAGTATGGAGTTTCAAT+AGG | - | chr3.1:82278529-82278548 | MS.gene32822:CDS | 35.0% | |
| GAAACCATGATAACTCAAAC+TGG | - | chr3.1:82280015-82280034 | MS.gene32822:intron | 35.0% | |
| GAATATGAAATCCAAGTCGT+CGG | + | chr3.1:82279571-82279590 | None:intergenic | 35.0% | |
| GATGAAATATATCCAGTTGC+AGG | - | chr3.1:82279300-82279319 | MS.gene32822:intron | 35.0% | |
| GGTTTCTTGTGTACATCTTT+AGG | - | chr3.1:82279368-82279387 | MS.gene32822:intron | 35.0% | |
| TAAGAATCAAACCCTGATTG+CGG | + | chr3.1:82278003-82278022 | None:intergenic | 35.0% | |
| TATAATGCGCAACAACAATC+TGG | - | chr3.1:82281146-82281165 | MS.gene32822:intron | 35.0% | |
| TATGATCAGCAACAAGGTTA+TGG | - | chr3.1:82281188-82281207 | MS.gene32822:intron | 35.0% | |
| TCAAACAAAATCTAACAGCC+AGG | + | chr3.1:82280165-82280184 | None:intergenic | 35.0% | |
| TCTTGTGTACATCTTTAGGT+TGG | - | chr3.1:82279372-82279391 | MS.gene32822:intron | 35.0% | |
| TGATGTACGGTCTGTATAAT+TGG | - | chr3.1:82280483-82280502 | MS.gene32822:intron | 35.0% | |
| TGATGTTTCAATGACGGTAA+AGG | - | chr3.1:82278699-82278718 | MS.gene32822:CDS | 35.0% | |
| TGCTCAAATGATGTTGGAAT+TGG | - | chr3.1:82279126-82279145 | MS.gene32822:intron | 35.0% | |
| TGTTGCTGATCATATGTTTG+TGG | + | chr3.1:82281182-82281201 | None:intergenic | 35.0% | |
| TTATTAACTAGGCTGAAGCT+GGG | - | chr3.1:82279192-82279211 | MS.gene32822:intron | 35.0% | |
| TTGGTTAATCAAATCCTCAC+TGG | - | chr3.1:82279720-82279739 | MS.gene32822:intron | 35.0% | |
| TTTATTAACTAGGCTGAAGC+TGG | - | chr3.1:82279191-82279210 | MS.gene32822:intron | 35.0% | |
| TTTCTGTTGATGTATCACCT+GGG | + | chr3.1:82279650-82279669 | None:intergenic | 35.0% | |
| ! | CTGCGCCTTTTGTAAAAATA+AGG | - | chr3.1:82279951-82279970 | MS.gene32822:CDS | 35.0% |
| ! | GATTCAAGTTACTCGTGATA+TGG | - | chr3.1:82278164-82278183 | MS.gene32822:CDS | 35.0% |
| ! | GTTGGTGTTCTTATTGGTAA+AGG | - | chr3.1:82278099-82278118 | MS.gene32822:CDS | 35.0% |
| ! | TTCATCGTACTTGCGTTTTA+GGG | + | chr3.1:82277839-82277858 | None:intergenic | 35.0% |
| !! | ATCTGGCTTATCATTTTTGG+AGG | - | chr3.1:82279775-82279794 | MS.gene32822:intron | 35.0% |
| !! | CTTTAGGTTGGCCTTATAAT+TGG | - | chr3.1:82279384-82279403 | MS.gene32822:intron | 35.0% |
| !! | GTTGGCCTTATAATTGGTAA+AGG | - | chr3.1:82279390-82279409 | MS.gene32822:intron | 35.0% |
| !! | TCTGGCTTATCATTTTTGGA+GGG | - | chr3.1:82279776-82279795 | MS.gene32822:intron | 35.0% |
| !! | TGCTGATTCAATTTGATCAG+GGG | + | chr3.1:82279694-82279713 | None:intergenic | 35.0% |
| AAACGAACCAAGTCCGATAA+CGG | - | chr3.1:82277973-82277992 | MS.gene32822:CDS | 40.0% | |
| AACAAGCTGGTTATGGCTAT+GGG | - | chr3.1:82280823-82280842 | MS.gene32822:intron | 40.0% | |
| AACTTCTTGAGCTCGTTGTT+TGG | + | chr3.1:82277902-82277921 | None:intergenic | 40.0% | |
| ACCATCCTAGTCTGAGAATT+AGG | + | chr3.1:82278198-82278217 | None:intergenic | 40.0% | |
| AGTGCAAATCCACCTGTTTA+TGG | - | chr3.1:82281458-82281477 | MS.gene32822:CDS | 40.0% | |
| ATCTGCTTGTGATCCATAGT+TGG | + | chr3.1:82281267-82281286 | None:intergenic | 40.0% | |
| CAGAATCGTCTCAGAAATTC+AGG | - | chr3.1:82280723-82280742 | MS.gene32822:intron | 40.0% | |
| CTGATCCTAATTCTCAGACT+AGG | - | chr3.1:82278190-82278209 | MS.gene32822:CDS | 40.0% | |
| CTTTCTGTTGATGTATCACC+TGG | + | chr3.1:82279651-82279670 | None:intergenic | 40.0% | |
| GAAATACCTAATGGTAGGGT+TGG | - | chr3.1:82278081-82278100 | MS.gene32822:CDS | 40.0% | |
| GAACTATTTCCATATGACGG+CGG | + | chr3.1:82281665-82281684 | None:intergenic | 40.0% | |
| GACTAGGATGGTTGAACTTA+TGG | - | chr3.1:82278206-82278225 | MS.gene32822:CDS | 40.0% | |
| GACTGTGATTGACCATAAAC+AGG | + | chr3.1:82281473-82281492 | None:intergenic | 40.0% | |
| GGAAATAGTTCTTATGGTGC+TGG | - | chr3.1:82281674-82281693 | MS.gene32822:CDS | 40.0% | |
| GGTGTTCTTATTGGTAAAGG+AGG | - | chr3.1:82278102-82278121 | MS.gene32822:CDS | 40.0% | |
| GGTTATGGTCAAGAAAGCTA+TGG | - | chr3.1:82281119-82281138 | MS.gene32822:intron | 40.0% | |
| TAATCAAATCCTCACTGGTG+AGG | - | chr3.1:82279725-82279744 | MS.gene32822:intron | 40.0% | |
| TATTAACTAGGCTGAAGCTG+GGG | - | chr3.1:82279193-82279212 | MS.gene32822:intron | 40.0% | |
| TCCTAATTCTCAGACTAGGA+TGG | - | chr3.1:82278194-82278213 | MS.gene32822:CDS | 40.0% | |
| TGCTGAGAAACTCATCAATG+AGG | - | chr3.1:82278251-82278270 | MS.gene32822:CDS | 40.0% | |
| TGTGATTGACCATAAACAGG+TGG | + | chr3.1:82281470-82281489 | None:intergenic | 40.0% | |
| TTCTGTTGATGTATCACCTG+GGG | + | chr3.1:82279649-82279668 | None:intergenic | 40.0% | |
| ! | AAGAGTATGCAAGCTTCTAC+CGG | - | chr3.1:82279426-82279445 | MS.gene32822:intron | 40.0% |
| ! | GGCCTTATAATTGGTAAAGG+AGG | - | chr3.1:82279393-82279412 | MS.gene32822:intron | 40.0% |
| ! | GTCTCCAGTTTGAGTTATCA+TGG | + | chr3.1:82280022-82280041 | None:intergenic | 40.0% |
| ! | GTTCATCGTACTTGCGTTTT+AGG | + | chr3.1:82277840-82277859 | None:intergenic | 40.0% |
| ! | TAAACAGGTGGATTTGCACT+TGG | + | chr3.1:82281458-82281477 | None:intergenic | 40.0% |
| ! | TTATCGGACTTGGTTCGTTT+GGG | + | chr3.1:82277973-82277992 | None:intergenic | 40.0% |
| !! | ACTTGGTGCTTAGTGATGTA+CGG | - | chr3.1:82280470-82280489 | MS.gene32822:intron | 40.0% |
| !! | ATTTGCACTTGGCTTTTGAG+AGG | + | chr3.1:82281447-82281466 | None:intergenic | 40.0% |
| !! | TATTCTCGTTTGGGTTGATG+TGG | - | chr3.1:82279347-82279366 | MS.gene32822:intron | 40.0% |
| !! | TTTGCACTTGGCTTTTGAGA+GGG | + | chr3.1:82281446-82281465 | None:intergenic | 40.0% |
| AACTCCTCAACCAGGTTATG+CGG | - | chr3.1:82281349-82281368 | MS.gene32822:CDS | 45.0% | |
| AGAAATTCAGGGAACTCAGG+TGG | - | chr3.1:82280735-82280754 | MS.gene32822:intron | 45.0% | |
| AGAACACCAACCCTACCATT+AGG | + | chr3.1:82278090-82278109 | None:intergenic | 45.0% | |
| AGTCAACCACAGTCTGGTTA+TGG | - | chr3.1:82281401-82281420 | MS.gene32822:CDS | 45.0% | |
| ATTACTCCCACTGCCATAAC+TGG | + | chr3.1:82281222-82281241 | None:intergenic | 45.0% | |
| CAACAAGCTGGTTATGGCTA+TGG | - | chr3.1:82280822-82280841 | MS.gene32822:intron | 45.0% | |
| CATCCCCACACCTTATTGTT+TGG | + | chr3.1:82279284-82279303 | None:intergenic | 45.0% | |
| CCAAAAAACATGCCTGCAAC+TGG | + | chr3.1:82279315-82279334 | None:intergenic | 45.0% | |
| CCAAGAAACAAACCTCAGCA+AGG | + | chr3.1:82278278-82278297 | None:intergenic | 45.0% | |
| CTCAGAAATTCAGGGAACTC+AGG | - | chr3.1:82280732-82280751 | MS.gene32822:intron | 45.0% | |
| GATAACATACCTCACCAGTG+AGG | + | chr3.1:82279737-82279756 | None:intergenic | 45.0% | |
| GGAGTAATCCAACCCAAGAA+GGG | - | chr3.1:82281234-82281253 | MS.gene32822:intron | 45.0% | |
| TATGGAAGTCAACCACAGTC+TGG | - | chr3.1:82281395-82281414 | MS.gene32822:CDS | 45.0% | |
| TATTGGCATCAACGGGAATG+AGG | - | chr3.1:82280586-82280605 | MS.gene32822:intron | 45.0% | |
| TCAGCAGAAGAAACAGCATC+AGG | + | chr3.1:82278237-82278256 | None:intergenic | 45.0% | |
| TCTGGTTATGGACCTAGCTA+TGG | - | chr3.1:82281413-82281432 | MS.gene32822:CDS | 45.0% | |
| TCTGTTGATGTATCACCTGG+GGG | + | chr3.1:82279648-82279667 | None:intergenic | 45.0% | |
| TGAGGCTGACCTGTTAGATT+GGG | - | chr3.1:82280415-82280434 | MS.gene32822:intron | 45.0% | |
| TTACTCCCACTGCCATAACT+GGG | + | chr3.1:82281221-82281240 | None:intergenic | 45.0% | |
| TTCCCTCAACCCAATCTAAC+AGG | + | chr3.1:82280427-82280446 | None:intergenic | 45.0% | |
| TTGAGGAGTTCCTTGTTGGT+TGG | + | chr3.1:82281339-82281358 | None:intergenic | 45.0% | |
| TTGAGGCTGACCTGTTAGAT+TGG | - | chr3.1:82280414-82280433 | MS.gene32822:intron | 45.0% | |
| ! | AGACTGTGGTTGACTTCCAT+AGG | + | chr3.1:82281396-82281415 | None:intergenic | 45.0% |
| ! | CCTTGCTGAGGTTTGTTTCT+TGG | - | chr3.1:82278275-82278294 | MS.gene32822:CDS | 45.0% |
| ! | GTTATCGGACTTGGTTCGTT+TGG | + | chr3.1:82277974-82277993 | None:intergenic | 45.0% |
| ! | TGACCTGTTAGATTGGGTTG+AGG | - | chr3.1:82280421-82280440 | MS.gene32822:intron | 45.0% |
| !! | AGTAGTGGGTTGGGAAGTTT+GGG | + | chr3.1:82281294-82281313 | None:intergenic | 45.0% |
| !! | GACCTGTTAGATTGGGTTGA+GGG | - | chr3.1:82280422-82280441 | MS.gene32822:intron | 45.0% |
| !! | GGTAGGGTTGGTGTTCTTAT+TGG | - | chr3.1:82278093-82278112 | MS.gene32822:CDS | 45.0% |
| !! | TGTTAGATTGGGTTGAGGGA+AGG | - | chr3.1:82280426-82280445 | MS.gene32822:intron | 45.0% |
| !! | TTATGGTGCTGGTTATGCTC+AGG | - | chr3.1:82281685-82281704 | MS.gene32822:CDS | 45.0% |
| !!! | CCAGTTGCAGGCATGTTTTT+TGG | - | chr3.1:82279312-82279331 | MS.gene32822:intron | 45.0% |
| !!! | TTTTTTAAGTTTAAAATTAT+GGG | - | chr3.1:82279812-82279831 | MS.gene32822:intron | 5.0% |
| ACGGATGGTTGCACAATCTG+GGG | - | chr3.1:82279235-82279254 | MS.gene32822:intron | 50.0% | |
| AGACGGATGGTTGCACAATC+TGG | - | chr3.1:82279233-82279252 | MS.gene32822:intron | 50.0% | |
| ATAACGGTGCTCCGCAATCA+GGG | - | chr3.1:82277989-82278008 | MS.gene32822:CDS | 50.0% | |
| CAACAAGGAACTCCTCAACC+AGG | - | chr3.1:82281341-82281360 | MS.gene32822:CDS | 50.0% | |
| CAATCATACGGTGCTCCTCA+AGG | - | chr3.1:82281614-82281633 | MS.gene32822:CDS | 50.0% | |
| CAGCAACAGCAAAATCCTGG+GGG | - | chr3.1:82281020-82281039 | MS.gene32822:intron | 50.0% | |
| CATCAATGAGGTCCTTGCTG+AGG | - | chr3.1:82278263-82278282 | MS.gene32822:CDS | 50.0% | |
| CCAGCAACAGCAAAATCCTG+GGG | - | chr3.1:82281019-82281038 | MS.gene32822:intron | 50.0% | |
| CCCAGCAACAGCAAAATCCT+GGG | - | chr3.1:82281018-82281037 | MS.gene32822:intron | 50.0% | |
| CCTGTGCAACAAGCTGGTTA+TGG | - | chr3.1:82280816-82280835 | MS.gene32822:intron | 50.0% | |
| CTAGGTCCATAACCAGACTG+TGG | + | chr3.1:82281410-82281429 | None:intergenic | 50.0% | |
| CTGGTTGAGGAGTTCCTTGT+TGG | + | chr3.1:82281343-82281362 | None:intergenic | 50.0% | |
| GACGGATGGTTGCACAATCT+GGG | - | chr3.1:82279234-82279253 | MS.gene32822:intron | 50.0% | |
| GAGAACCTGAATTCGTGCTC+CGG | + | chr3.1:82279448-82279467 | None:intergenic | 50.0% | |
| GATGGACCAGAGTATGATCC+AGG | + | chr3.1:82280852-82280871 | None:intergenic | 50.0% | |
| GCGCAACAACAATCTGGGTA+TGG | - | chr3.1:82281152-82281171 | MS.gene32822:intron | 50.0% | |
| GGCATGTTATACTGCGGTGA+TGG | + | chr3.1:82280870-82280889 | None:intergenic | 50.0% | |
| GGCTATGCTACCAACCAACA+AGG | - | chr3.1:82281326-82281345 | MS.gene32822:CDS | 50.0% | |
| GGCTGAGGCATGTTATACTG+CGG | + | chr3.1:82280876-82280895 | None:intergenic | 50.0% | |
| GGGAGTAATCCAACCCAAGA+AGG | - | chr3.1:82281233-82281252 | MS.gene32822:intron | 50.0% | |
| GGGTATGGTCCGCAATCATA+CGG | - | chr3.1:82281602-82281621 | MS.gene32822:CDS | 50.0% | |
| GGTTATAGCCAACCAGGACA+GGG | - | chr3.1:82281098-82281117 | MS.gene32822:intron | 50.0% | |
| TACAGTCAACCTCCTTCCTC+TGG | - | chr3.1:82281077-82281096 | MS.gene32822:intron | 50.0% | |
| TATGATTGCGGACCATACCC+TGG | + | chr3.1:82281602-82281621 | None:intergenic | 50.0% | |
| TCAGGTGGCTATACTCAGCA+AGG | - | chr3.1:82280750-82280769 | MS.gene32822:intron | 50.0% | |
| TCCTCTGGTTATAGCCAACC+AGG | - | chr3.1:82281092-82281111 | MS.gene32822:intron | 50.0% | |
| TCGCAGCAAGGTGGTAGTTA+TGG | - | chr3.1:82278042-82278061 | MS.gene32822:CDS | 50.0% | |
| TCTTGACCATAACCCTGTCC+TGG | + | chr3.1:82281113-82281132 | None:intergenic | 50.0% | |
| TGAGGAGGATAGCCTGCATA+TGG | + | chr3.1:82280900-82280919 | None:intergenic | 50.0% | |
| TGAGTAGACTGCTGGTGAGA+TGG | + | chr3.1:82280966-82280985 | None:intergenic | 50.0% | |
| TGGCTATAACCAGAGGAAGG+AGG | + | chr3.1:82281089-82281108 | None:intergenic | 50.0% | |
| TGGTTATAGCCAACCAGGAC+AGG | - | chr3.1:82281097-82281116 | MS.gene32822:intron | 50.0% | |
| TTCTACCGGAGCACGAATTC+AGG | - | chr3.1:82279440-82279459 | MS.gene32822:intron | 50.0% | |
| TTGACTTCCATAGGCCGCTT+GGG | + | chr3.1:82281387-82281406 | None:intergenic | 50.0% | |
| ! | CTTGGTTCGTTTGGGATCGT+AGG | + | chr3.1:82277965-82277984 | None:intergenic | 50.0% |
| ! | GGTTGGCTATAACCAGAGGA+AGG | + | chr3.1:82281092-82281111 | None:intergenic | 50.0% |
| ! | TATGGCTCTGCTCCCAGTTA+TGG | - | chr3.1:82281206-82281225 | MS.gene32822:intron | 50.0% |
| ! | TCCTGGTTGGCTATAACCAG+AGG | + | chr3.1:82281096-82281115 | None:intergenic | 50.0% |
| !! | CAGTAGTGGGTTGGGAAGTT+TGG | + | chr3.1:82281295-82281314 | None:intergenic | 50.0% |
| !! | CCATAACCAGCTTGTTGCAC+AGG | + | chr3.1:82280819-82280838 | None:intergenic | 50.0% |
| !! | GTAGTGGGTTGGGAAGTTTG+GGG | + | chr3.1:82281293-82281312 | None:intergenic | 50.0% |
| !! | GTTGGTAGCATAGCCTTGCT+GGG | + | chr3.1:82281321-82281340 | None:intergenic | 50.0% |
| !! | TAGTGGGTTGGGAAGTTTGG+GGG | + | chr3.1:82281292-82281311 | None:intergenic | 50.0% |
| !! | TGAGGAGCACCGTATGATTG+CGG | + | chr3.1:82281614-82281633 | None:intergenic | 50.0% |
| !! | TGATTGCGGAGCACCGTTAT+CGG | + | chr3.1:82277989-82278008 | None:intergenic | 50.0% |
| !! | TTTGCTGTTGCTGGGGTTGT+TGG | + | chr3.1:82281013-82281032 | None:intergenic | 50.0% |
| !!! | CCAGGATTTTGCTGTTGCTG+GGG | + | chr3.1:82281020-82281039 | None:intergenic | 50.0% |
| !!! | CCCAGGATTTTGCTGTTGCT+GGG | + | chr3.1:82281021-82281040 | None:intergenic | 50.0% |
| AACTGCACAGGCTGTTCCAC+AGG | - | chr3.1:82281733-82281752 | MS.gene32822:CDS | 55.0% | |
| AAGCCGCAATACTCGCAGCA+AGG | - | chr3.1:82278030-82278049 | MS.gene32822:CDS | 55.0% | |
| ACTGCACAGGCTGTTCCACA+GGG | - | chr3.1:82281734-82281753 | MS.gene32822:CDS | 55.0% | |
| ACTTTAGCAACACCGCCCTG+TGG | + | chr3.1:82281752-82281771 | None:intergenic | 55.0% | |
| AGCCAACCAGGACAGGGTTA+TGG | - | chr3.1:82281104-82281123 | MS.gene32822:intron | 55.0% | |
| ATACCTTTGCATCCTCCCCC+AGG | - | chr3.1:82279630-82279649 | MS.gene32822:intron | 55.0% | |
| ATGCCTCAGCCACCATATGC+AGG | - | chr3.1:82280885-82280904 | MS.gene32822:intron | 55.0% | |
| CACCAGCAGTCTACTCATGC+AGG | - | chr3.1:82280969-82280988 | MS.gene32822:intron | 55.0% | |
| CACCTGCATGAGTAGACTGC+TGG | + | chr3.1:82280974-82280993 | None:intergenic | 55.0% | |
| CAGCAGTCTACTCATGCAGG+TGG | - | chr3.1:82280972-82280991 | MS.gene32822:intron | 55.0% | |
| CAGTTGGCGGAATATCCACC+GGG | + | chr3.1:82280927-82280946 | None:intergenic | 55.0% | |
| CCAGTTGGCGGAATATCCAC+CGG | + | chr3.1:82280928-82280947 | None:intergenic | 55.0% | |
| CCCCAGCAACAGCAAAATCC+TGG | - | chr3.1:82281017-82281036 | MS.gene32822:intron | 55.0% | |
| CCTTGCTGGGCAACAGTAGT+GGG | + | chr3.1:82281308-82281327 | None:intergenic | 55.0% | |
| CGGATGGTTGCACAATCTGG+GGG | - | chr3.1:82279236-82279255 | MS.gene32822:intron | 55.0% | |
| CGGTGGATATTCCGCCAACT+GGG | - | chr3.1:82280926-82280945 | MS.gene32822:intron | 55.0% | |
| CTGCTCCCAGTTATGGCAGT+GGG | - | chr3.1:82281213-82281232 | MS.gene32822:intron | 55.0% | |
| CTGTATGCAGACCCATCAGC+TGG | + | chr3.1:82281056-82281075 | None:intergenic | 55.0% | |
| GAATATCCACCGGGTTGCTG+AGG | + | chr3.1:82280918-82280937 | None:intergenic | 55.0% | |
| GACCATAACCCTGTCCTGGT+TGG | + | chr3.1:82281109-82281128 | None:intergenic | 55.0% | |
| GCTACCGCATAACCTGGTTG+AGG | + | chr3.1:82281356-82281375 | None:intergenic | 55.0% | |
| GCTCTCTGAGTGCCTAACTC+TGG | + | chr3.1:82281569-82281588 | None:intergenic | 55.0% | |
| GGAGGATAGCCTGCATATGG+TGG | + | chr3.1:82280897-82280916 | None:intergenic | 55.0% | |
| GGGCAACCTGGATCATACTC+TGG | - | chr3.1:82280843-82280862 | MS.gene32822:intron | 55.0% | |
| GGGTATGCTCAGCCAGAGTT+AGG | - | chr3.1:82281554-82281573 | MS.gene32822:CDS | 55.0% | |
| GGTGAGATGGTGCAGTGGAT+TGG | + | chr3.1:82280953-82280972 | None:intergenic | 55.0% | |
| GGTTATGGCTATGGGCAACC+TGG | - | chr3.1:82280831-82280850 | MS.gene32822:intron | 55.0% | |
| GTAGATGAGCGCAAGTCCCA+AGG | + | chr3.1:82280303-82280322 | None:intergenic | 55.0% | |
| GTCCTTCACAGCCAGCTGAT+GGG | - | chr3.1:82281042-82281061 | MS.gene32822:intron | 55.0% | |
| GTTGATGTATCACCTGGGGG+AGG | + | chr3.1:82279645-82279664 | None:intergenic | 55.0% | |
| TAGCCTGCATATGGTGGCTG+AGG | + | chr3.1:82280891-82280910 | None:intergenic | 55.0% | |
| TAGCGATGGAGCAACTGCAC+AGG | - | chr3.1:82281721-82281740 | MS.gene32822:CDS | 55.0% | |
| TCACAGTCACCTAGCACAGC+AGG | - | chr3.1:82281485-82281504 | MS.gene32822:CDS | 55.0% | |
| TCATACGGTGCTCCTCAAGG+TGG | - | chr3.1:82281617-82281636 | MS.gene32822:CDS | 55.0% | |
| TCTGCTCCCAGTTATGGCAG+TGG | - | chr3.1:82281212-82281231 | MS.gene32822:intron | 55.0% | |
| TCTGGCTGAGCATACCCAGA+AGG | + | chr3.1:82281551-82281570 | None:intergenic | 55.0% | |
| TTCCATATGACGGCGGAGTC+TGG | + | chr3.1:82281658-82281677 | None:intergenic | 55.0% | |
| TTGGGATCGTAGGAGAGTGG+TGG | + | chr3.1:82277955-82277974 | None:intergenic | 55.0% | |
| ! | AGTTGGAAGCGTGCCCTTCT+TGG | + | chr3.1:82281250-82281269 | None:intergenic | 55.0% |
| ! | CCACCTTGCTGCGAGTATTG+CGG | + | chr3.1:82278036-82278055 | None:intergenic | 55.0% |
| ! | CGTTTGGGATCGTAGGAGAG+TGG | + | chr3.1:82277958-82277977 | None:intergenic | 55.0% |
| ! | GAAGGGCACGCTTCCAACTA+TGG | - | chr3.1:82281251-82281270 | MS.gene32822:intron | 55.0% |
| ! | GACTTCGAGTTCGATGTCCG+TGG | + | chr3.1:82277872-82277891 | None:intergenic | 55.0% |
| ! | GATAACGGTGCTCCGCAATC+AGG | - | chr3.1:82277988-82278007 | MS.gene32822:CDS | 55.0% |
| ! | GTTGACTTCCATAGGCCGCT+TGG | + | chr3.1:82281388-82281407 | None:intergenic | 55.0% |
| ! | GTTGGAAGCGTGCCCTTCTT+GGG | + | chr3.1:82281249-82281268 | None:intergenic | 55.0% |
| ! | TTCGAGTTCGATGTCCGTGG+CGG | + | chr3.1:82277869-82277888 | None:intergenic | 55.0% |
| !! | AGAGAGCACCAGTGCAACCA+GGG | - | chr3.1:82281582-82281601 | MS.gene32822:CDS | 55.0% |
| !! | AGTGGATTGGTCCCAGTTGG+CGG | + | chr3.1:82280940-82280959 | None:intergenic | 55.0% |
| !! | AGTGGGTTGGGAAGTTTGGG+GGG | + | chr3.1:82281291-82281310 | None:intergenic | 55.0% |
| !! | CTGGGCAACAGTAGTGGGTT+GGG | + | chr3.1:82281303-82281322 | None:intergenic | 55.0% |
| !! | GCACTTGGCTTTTGAGAGGG+AGG | + | chr3.1:82281443-82281462 | None:intergenic | 55.0% |
| !! | GGTTGGTAGCATAGCCTTGC+TGG | + | chr3.1:82281322-82281341 | None:intergenic | 55.0% |
| !! | TGCAGTGGATTGGTCCCAGT+TGG | + | chr3.1:82280943-82280962 | None:intergenic | 55.0% |
| !!! | CCCCAGGATTTTGCTGTTGC+TGG | + | chr3.1:82281022-82281041 | None:intergenic | 55.0% |
| AATCCCGACCACCGTCTAGC+TGG | - | chr3.1:82280778-82280797 | MS.gene32822:intron | 60.0% | |
| ACTTCCATAGGCCGCTTGGG+AGG | + | chr3.1:82281384-82281403 | None:intergenic | 60.0% | |
| AGCTAGACGGTGGTCGGGAT+TGG | + | chr3.1:82280779-82280798 | None:intergenic | 60.0% | |
| AGTTCGATGTCCGTGGCGGT+GGG | + | chr3.1:82277865-82277884 | None:intergenic | 60.0% | |
| ATAGGCCGCTTGGGAGGTAG+GGG | + | chr3.1:82281378-82281397 | None:intergenic | 60.0% | |
| ATCCCGACCACCGTCTAGCT+GGG | - | chr3.1:82280779-82280798 | MS.gene32822:intron | 60.0% | |
| CAGTCACCTAGCACAGCAGG+AGG | - | chr3.1:82281488-82281507 | MS.gene32822:CDS | 60.0% | |
| CATAGGCCGCTTGGGAGGTA+GGG | + | chr3.1:82281379-82281398 | None:intergenic | 60.0% | |
| CCATAGCCTCCTGCTGTGCT+AGG | + | chr3.1:82281497-82281516 | None:intergenic | 60.0% | |
| CCCACTACTGTTGCCCAGCA+AGG | - | chr3.1:82281305-82281324 | MS.gene32822:intron | 60.0% | |
| CCGCAATACTCGCAGCAAGG+TGG | - | chr3.1:82278033-82278052 | MS.gene32822:CDS | 60.0% | |
| CCGGTGGATATTCCGCCAAC+TGG | - | chr3.1:82280925-82280944 | MS.gene32822:intron | 60.0% | |
| CCTAGCACAGCAGGAGGCTA+TGG | - | chr3.1:82281494-82281513 | MS.gene32822:CDS | 60.0% | |
| CGATGAACAACCCACCGCCA+CGG | - | chr3.1:82277852-82277871 | MS.gene32822:CDS | 60.0% | |
| CTGAGCATACCCAGAAGGCG+GGG | + | chr3.1:82281546-82281565 | None:intergenic | 60.0% | |
| CTGCTGGTGAGATGGTGCAG+TGG | + | chr3.1:82280958-82280977 | None:intergenic | 60.0% | |
| CTTCTGGCGGTGGCACTAGA+CGG | - | chr3.1:82279216-82279235 | MS.gene32822:intron | 60.0% | |
| GAAGCGTGCCCTTCTTGGGT+TGG | + | chr3.1:82281245-82281264 | None:intergenic | 60.0% | |
| GACCCATCAGCTGGCTGTGA+AGG | + | chr3.1:82281047-82281066 | None:intergenic | 60.0% | |
| GCACCAGTGCAACCAGGGTA+TGG | - | chr3.1:82281587-82281606 | MS.gene32822:CDS | 60.0% | |
| GCCTTGCTGGGCAACAGTAG+TGG | + | chr3.1:82281309-82281328 | None:intergenic | 60.0% | |
| GCTCCAGCGTATGCTAGCGA+TGG | - | chr3.1:82281707-82281726 | MS.gene32822:CDS | 60.0% | |
| GCTCCATCGCTAGCATACGC+TGG | + | chr3.1:82281713-82281732 | None:intergenic | 60.0% | |
| GCTCGTCTTCTCAGCGTCAC+CGG | - | chr3.1:82277925-82277944 | MS.gene32822:CDS | 60.0% | |
| GCTGAGCATACCCAGAAGGC+GGG | + | chr3.1:82281547-82281566 | None:intergenic | 60.0% | |
| GCTGCTCCTGTGCAACAAGC+TGG | - | chr3.1:82280810-82280829 | MS.gene32822:intron | 60.0% | |
| GGACCATACCCTGGTTGCAC+TGG | + | chr3.1:82281593-82281612 | None:intergenic | 60.0% | |
| GGCTATCCTCCTCAGCAACC+CGG | - | chr3.1:82280906-82280925 | MS.gene32822:intron | 60.0% | |
| GGCTGAGCATACCCAGAAGG+CGG | + | chr3.1:82281548-82281567 | None:intergenic | 60.0% | |
| GGTCCTTCACAGCCAGCTGA+TGG | - | chr3.1:82281041-82281060 | MS.gene32822:intron | 60.0% | |
| GGTGACGCTGAGAAGACGAG+CGG | + | chr3.1:82277926-82277945 | None:intergenic | 60.0% | |
| GTAGGGGCTACCGCATAACC+TGG | + | chr3.1:82281362-82281381 | None:intergenic | 60.0% | |
| TAGGCTGAAGCTGGGGCTTC+TGG | - | chr3.1:82279200-82279219 | MS.gene32822:intron | 60.0% | |
| TATCCACCGGGTTGCTGAGG+AGG | + | chr3.1:82280915-82280934 | None:intergenic | 60.0% | |
| TATCCTCCTCAGCAACCCGG+TGG | - | chr3.1:82280909-82280928 | MS.gene32822:intron | 60.0% | |
| TCACCTGGGGGAGGATGCAA+AGG | + | chr3.1:82279636-82279655 | None:intergenic | 60.0% | |
| TGAGCATACCCAGAAGGCGG+GGG | + | chr3.1:82281545-82281564 | None:intergenic | 60.0% | |
| TGTTGCACAGGAGCAGCAGG+AGG | + | chr3.1:82280807-82280826 | None:intergenic | 60.0% | |
| ! | GCTTGTTGCACAGGAGCAGC+AGG | + | chr3.1:82280810-82280829 | None:intergenic | 60.0% |
| !! | CAGAGAGCACCAGTGCAACC+AGG | - | chr3.1:82281581-82281600 | MS.gene32822:CDS | 60.0% |
| !! | CGGAGCACCGTTATCGGACT+TGG | + | chr3.1:82277983-82278002 | None:intergenic | 60.0% |
| !! | GAGGGAGGAGCACCATAGCT+AGG | + | chr3.1:82281428-82281447 | None:intergenic | 60.0% |
| !! | GCTGGGCAACAGTAGTGGGT+TGG | + | chr3.1:82281304-82281323 | None:intergenic | 60.0% |
| AGCCCAGCTAGACGGTGGTC+GGG | + | chr3.1:82280784-82280803 | None:intergenic | 65.0% | |
| CAAGGTGGCCAGCCTGGCTA+TGG | - | chr3.1:82281632-82281651 | MS.gene32822:CDS | 65.0% | |
| CAGCTGACTGCCCGACGACT+TGG | - | chr3.1:82279557-82279576 | MS.gene32822:intron | 65.0% | |
| CCATAGGCCGCTTGGGAGGT+AGG | + | chr3.1:82281380-82281399 | None:intergenic | 65.0% | |
| CCTACCTCCCAAGCGGCCTA+TGG | - | chr3.1:82281377-82281396 | MS.gene32822:CDS | 65.0% | |
| GAGCCCAGCTAGACGGTGGT+CGG | + | chr3.1:82280785-82280804 | None:intergenic | 65.0% | |
| GAGTCTGGCCATAGCCAGGC+TGG | + | chr3.1:82281643-82281662 | None:intergenic | 65.0% | |
| GAGTTCGATGTCCGTGGCGG+TGG | + | chr3.1:82277866-82277885 | None:intergenic | 65.0% | |
| GCACAGGCTGTTCCACAGGG+CGG | - | chr3.1:82281737-82281756 | MS.gene32822:CDS | 65.0% | |
| GCAGGAGGAGCCCAGCTAGA+CGG | + | chr3.1:82280792-82280811 | None:intergenic | 65.0% | |
| GCTGAAGCTGGGGCTTCTGG+CGG | - | chr3.1:82279203-82279222 | MS.gene32822:intron | 65.0% | |
| GGCCAGACTCCGCCGTCATA+TGG | - | chr3.1:82281653-82281672 | MS.gene32822:CDS | 65.0% | |
| GGTAGCCCCTACCTCCCAAG+CGG | - | chr3.1:82281370-82281389 | MS.gene32822:CDS | 65.0% | |
| TGGCGGTGGCACTAGACGGA+TGG | - | chr3.1:82279220-82279239 | MS.gene32822:intron | 65.0% | |
| ! | GTAGGAGAGTGGTGGAGCGC+CGG | + | chr3.1:82277947-82277966 | None:intergenic | 65.0% |
| ! | TAGCCAGGCTGGCCACCTTG+AGG | + | chr3.1:82281632-82281651 | None:intergenic | 65.0% |
| CATACCCAGAAGGCGGGGGC+TGG | + | chr3.1:82281541-82281560 | None:intergenic | 70.0% | |
| CTAGCCAGCCCCCGCCTTCT+GGG | - | chr3.1:82281534-82281553 | MS.gene32822:CDS | 70.0% | |
| GAAGCTGGGGCTTCTGGCGG+TGG | - | chr3.1:82279206-82279225 | MS.gene32822:intron | 70.0% | |
| GCTCCTCAAGGTGGCCAGCC+TGG | - | chr3.1:82281626-82281645 | MS.gene32822:CDS | 70.0% | |
| GCTGGCTGTGAAGGACCCCC+AGG | + | chr3.1:82281038-82281057 | None:intergenic | 70.0% | |
| GGAGGAGCCCAGCTAGACGG+TGG | + | chr3.1:82280789-82280808 | None:intergenic | 70.0% | |
| GGCGGAGTCTGGCCATAGCC+AGG | + | chr3.1:82281647-82281666 | None:intergenic | 70.0% | |
| TCTAGCCAGCCCCCGCCTTC+TGG | - | chr3.1:82281533-82281552 | MS.gene32822:CDS | 70.0% | |
| !! | AGAAGGCGGGGGCTGGCTAG+AGG | + | chr3.1:82281534-82281553 | None:intergenic | 70.0% |
| !! | GAAGGCGGGGGCTGGCTAGA+GGG | + | chr3.1:82281533-82281552 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 82277811 | 82281787 | 82277811 | ID=MS.gene32822 |
| chr3.1 | mRNA | 82277811 | 82281787 | 82277811 | ID=MS.gene32822.t1;Parent=MS.gene32822 |
| chr3.1 | exon | 82281314 | 82281787 | 82281314 | ID=MS.gene32822.t1.exon1;Parent=MS.gene32822.t1 |
| chr3.1 | CDS | 82281314 | 82281787 | 82281314 | ID=cds.MS.gene32822.t1;Parent=MS.gene32822.t1 |
| chr3.1 | exon | 82280306 | 82280395 | 82280306 | ID=MS.gene32822.t1.exon2;Parent=MS.gene32822.t1 |
| chr3.1 | CDS | 82280306 | 82280395 | 82280306 | ID=cds.MS.gene32822.t1;Parent=MS.gene32822.t1 |
| chr3.1 | exon | 82280137 | 82280208 | 82280137 | ID=MS.gene32822.t1.exon3;Parent=MS.gene32822.t1 |
| chr3.1 | CDS | 82280137 | 82280208 | 82280137 | ID=cds.MS.gene32822.t1;Parent=MS.gene32822.t1 |
| chr3.1 | exon | 82279852 | 82279971 | 82279852 | ID=MS.gene32822.t1.exon4;Parent=MS.gene32822.t1 |
| chr3.1 | CDS | 82279852 | 82279971 | 82279852 | ID=cds.MS.gene32822.t1;Parent=MS.gene32822.t1 |
| chr3.1 | exon | 82277811 | 82278872 | 82277811 | ID=MS.gene32822.t1.exon5;Parent=MS.gene32822.t1 |
| chr3.1 | CDS | 82277811 | 82278872 | 82277811 | ID=cds.MS.gene32822.t1;Parent=MS.gene32822.t1 |
| Gene Sequence |
| Protein sequence |
