Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32823.t1 | XP_003603139.1 | 88.4 | 490 | 46 | 1 | 1 | 479 | 1 | 490 | 1.30E-192 | 682.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32823.t1 | Q96AE4 | 32.0 | 247 | 146 | 7 | 29 | 263 | 33 | 269 | 1.8e-22 | 109.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32823.t1 | G7J7L9 | 88.4 | 490 | 46 | 1 | 1 | 479 | 1 | 490 | 9.3e-193 | 682.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02577 | MS.gene32823 | PPI |
| MS.gene32823 | MS.gene03206 | PPI |
| MS.gene73791 | MS.gene32823 | PPI |
| MS.gene46269 | MS.gene32823 | PPI |
| MS.gene73790 | MS.gene32823 | PPI |
| MS.gene46271 | MS.gene32823 | PPI |
| MS.gene32823 | MS.gene013791 | PPI |
| MS.gene013796 | MS.gene32823 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32823.t1 | MTR_3g104270 | 95.537 | 605 | 16 | 1 | 1 | 594 | 1 | 605 | 0.0 | 1105 |
| MS.gene32823.t1 | MTR_3g104280 | 95.041 | 605 | 19 | 1 | 1 | 594 | 1 | 605 | 0.0 | 1095 |
| MS.gene32823.t1 | MTR_1g016760 | 61.094 | 640 | 142 | 17 | 1 | 576 | 1 | 597 | 0.0 | 576 |
| MS.gene32823.t1 | MTR_5g008420 | 41.973 | 517 | 214 | 24 | 82 | 552 | 181 | 657 | 5.29e-71 | 244 |
| MS.gene32823.t1 | MTR_1g090773 | 29.032 | 217 | 123 | 6 | 89 | 291 | 39 | 238 | 1.15e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32823.t1 | AT2G25970 | 52.305 | 564 | 177 | 21 | 26 | 542 | 66 | 584 | 3.10e-125 | 382 |
| MS.gene32823.t1 | AT1G33680 | 34.397 | 564 | 242 | 25 | 86 | 585 | 232 | 731 | 6.03e-54 | 196 |
| MS.gene32823.t1 | AT4G10070 | 44.961 | 258 | 124 | 7 | 82 | 328 | 172 | 422 | 8.55e-53 | 192 |
| MS.gene32823.t1 | AT5G04430 | 30.288 | 208 | 125 | 7 | 89 | 289 | 38 | 232 | 1.22e-13 | 72.8 |
| MS.gene32823.t1 | AT5G04430 | 31.548 | 168 | 102 | 4 | 89 | 253 | 38 | 195 | 2.43e-12 | 68.6 |
Find 231 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGCCAGGCCCCGCCTTC+TGG | 0.193239 | 3.1:-82252244 | MS.gene32823:CDS |
| CTTTAGGTTGGCCTTATAAT+TGG | 0.202642 | 3.1:-82259144 | MS.gene32823:intron |
| GGTAGGGTTGGTGTTCTTAT+TGG | 0.218158 | 3.1:-82260435 | MS.gene32823:CDS |
| GACTAGGATGGTTGAACTTA+TGG | 0.236098 | 3.1:-82260322 | MS.gene32823:CDS |
| CAGAATCGTCTCAGAAATTC+AGG | 0.249484 | 3.1:-82253021 | MS.gene32823:CDS |
| CAGTAGTGGGTTGGGAAGTT+TGG | 0.252253 | 3.1:+82252452 | None:intergenic |
| CTCCTCCTTTACCAATTATA+AGG | 0.261517 | 3.1:+82259133 | None:intergenic |
| TAGGCTGAAGCTGGGGCTTC+TGG | 0.266896 | 3.1:-82259328 | MS.gene32823:CDS |
| ATTACTCCCACTGCCATAAC+TGG | 0.291727 | 3.1:+82252525 | None:intergenic |
| CTACGGTAGCATAGCCTTGC+TGG | 0.302560 | 3.1:+82252425 | None:intergenic |
| TTCTACCGGAGCACGAATTC+AGG | 0.305971 | 3.1:-82259088 | MS.gene32823:intron |
| AGACGGATGGTTGCACAATC+TGG | 0.309169 | 3.1:-82259295 | MS.gene32823:CDS |
| ACCATCCTAGTCTGAGAATT+AGG | 0.309685 | 3.1:+82260333 | None:intergenic |
| CATCCCCACACCTTATTGTT+TGG | 0.311267 | 3.1:+82259247 | None:intergenic |
| CTTTCTGTTGATGTATCACC+TGG | 0.313635 | 3.1:+82258880 | None:intergenic |
| AGTAGTGGGTTGGGAAGTTT+GGG | 0.330555 | 3.1:+82252453 | None:intergenic |
| TCATATGGAAATAGTTCTTA+TGG | 0.338429 | 3.1:-82252109 | MS.gene32823:CDS |
| GACTGACCATAGCCTCCTGC+TGG | 0.350562 | 3.1:+82252277 | None:intergenic |
| TATAATGCGCAACAACAATC+TGG | 0.353841 | 3.1:-82252598 | MS.gene32823:CDS |
| CCGGTGGATATTCCGCCAAC+TGG | 0.354362 | 3.1:-82252819 | MS.gene32823:CDS |
| TTTGCTGTTGCTGGGGTTGT+TGG | 0.358645 | 3.1:+82252734 | None:intergenic |
| GTTATCGGACTTGGTTCGTT+TGG | 0.360575 | 3.1:+82260557 | None:intergenic |
| AACTTCTTGAGCTCGTTGTT+TGG | 0.361408 | 3.1:+82260629 | None:intergenic |
| GAAGCTGGGGCTTCTGGCGG+TGG | 0.361827 | 3.1:-82259322 | MS.gene32823:CDS |
| AGTGCAAATCCACCTGCTTA+TGG | 0.362303 | 3.1:-82252319 | MS.gene32823:CDS |
| TTTGCTGATTCAATTTGATC+AGG | 0.363459 | 3.1:+82258835 | None:intergenic |
| AGTTGGAAGTGTGCCCCTCT+TGG | 0.365119 | 3.1:+82252497 | None:intergenic |
| GATTCAAGTTACTCGTGATA+TGG | 0.369842 | 3.1:-82260364 | MS.gene32823:CDS |
| CCATAGGCCGCTTGGGAGGT+AGG | 0.372582 | 3.1:+82252400 | None:intergenic |
| TTTATTAACTAGGCTGAAGC+TGG | 0.373039 | 3.1:-82259337 | MS.gene32823:intron |
| CGGAGCACCGTTATCGGACT+TGG | 0.374382 | 3.1:+82260548 | None:intergenic |
| GAGGGGCACACTTCCAACTA+TGG | 0.374400 | 3.1:-82252493 | MS.gene32823:CDS |
| CCTGCACAACAAGCTGGTTA+TGG | 0.376085 | 3.1:-82252928 | MS.gene32823:CDS |
| GATGCAAATACCAAACAATA+AGG | 0.377129 | 3.1:-82259257 | MS.gene32823:intron |
| TTATCGGACTTGGTTCGTTT+GGG | 0.378392 | 3.1:+82260558 | None:intergenic |
| GAGTTCGATGTCCGTGGCGG+TGG | 0.387307 | 3.1:+82260665 | None:intergenic |
| TGTTGCTGATCATATGTTTG+TGG | 0.391746 | 3.1:+82252565 | None:intergenic |
| GGTCCTCCACAGCCAGCTGA+TGG | 0.395783 | 3.1:-82252703 | MS.gene32823:CDS |
| GTTGGTGTTCTTATTGGTAA+AGG | 0.399271 | 3.1:-82260429 | MS.gene32823:CDS |
| CCTACCTCCCAAGCGGCCTA+TGG | 0.399491 | 3.1:-82252400 | MS.gene32823:CDS |
| GATAACGGTGCTCCGCAATC+AGG | 0.402443 | 3.1:-82260540 | MS.gene32823:CDS |
| TTCCATATGACGGTGGAGTC+TGG | 0.403625 | 3.1:+82252122 | None:intergenic |
| CCCCAGCAACAGCAAAATCC+TGG | 0.404109 | 3.1:-82252727 | MS.gene32823:CDS |
| AGTCAACCACAGTCTGGTTA+TGG | 0.407882 | 3.1:-82252376 | MS.gene32823:CDS |
| GGCCAGACTCCACCGTCATA+TGG | 0.410070 | 3.1:-82252124 | MS.gene32823:CDS |
| TATGATCAGCAACAAGGTTA+TGG | 0.411167 | 3.1:-82252556 | MS.gene32823:CDS |
| AATCCCGACCACCGTCTAGC+TGG | 0.415564 | 3.1:-82252966 | MS.gene32823:CDS |
| CATAGGCCGCTTGGGAGGTA+GGG | 0.417451 | 3.1:+82252401 | None:intergenic |
| CATATCCAGAAGGCGGGGCC+TGG | 0.418708 | 3.1:+82252239 | None:intergenic |
| ACTAGGATGGTTGAACTTAT+GGG | 0.418819 | 3.1:-82260321 | MS.gene32823:CDS |
| GCTTGTTGTGCAGGAGCAGC+AGG | 0.419616 | 3.1:+82252937 | None:intergenic |
| TCTGGTTATGGACCTGGTTA+TGG | 0.421938 | 3.1:-82252364 | MS.gene32823:CDS |
| TATGGCTCTGCTCCCAGTTA+TGG | 0.425707 | 3.1:-82252538 | MS.gene32823:CDS |
| AGCCAACCAGGACAGGGTTA+TGG | 0.429254 | 3.1:-82252640 | MS.gene32823:CDS |
| CCATAGCCTCCTGCTGGGCT+AGG | 0.435681 | 3.1:+82252283 | None:intergenic |
| TGGTTATAGCCAACCAGGAC+AGG | 0.437107 | 3.1:-82252647 | MS.gene32823:CDS |
| CTGGGCAACAGTAGTGGGTT+GGG | 0.439592 | 3.1:+82252444 | None:intergenic |
| CAACAAGCTGGTTATGGCTA+TGG | 0.440407 | 3.1:-82252922 | MS.gene32823:CDS |
| GACGGATGGTTGCACAATCT+GGG | 0.446354 | 3.1:-82259294 | MS.gene32823:CDS |
| GAGTCTGGCCATAGCTAGGC+TGG | 0.448899 | 3.1:+82252137 | None:intergenic |
| GTTGACTTCCATAGGCCGCT+TGG | 0.454305 | 3.1:+82252392 | None:intergenic |
| AGCCCAGCTAGACGGTGGTC+GGG | 0.454864 | 3.1:+82252963 | None:intergenic |
| TCCTGACCATAACCCTGTCC+TGG | 0.455249 | 3.1:+82252634 | None:intergenic |
| CCATAACCAGCTTGTTGTGC+AGG | 0.455611 | 3.1:+82252928 | None:intergenic |
| CGCTTGGGAGGTAGGGGCTA+CGG | 0.458136 | 3.1:+82252408 | None:intergenic |
| AACTACACAGGCTGTTCCAC+AGG | 0.458325 | 3.1:-82252044 | MS.gene32823:CDS |
| TTGACTTCCATAGGCCGCTT+GGG | 0.461597 | 3.1:+82252393 | None:intergenic |
| AGCTAGACGGTGGTCGGGAT+TGG | 0.461750 | 3.1:+82252968 | None:intergenic |
| AATTGAATCAGCAAAGCAAT+TGG | 0.464801 | 3.1:-82258827 | MS.gene32823:CDS |
| AAGTATCTTCAGATGCAATC+TGG | 0.464861 | 3.1:-82260393 | MS.gene32823:CDS |
| GTCCTCCACAGCCAGCTGAT+GGG | 0.465554 | 3.1:-82252702 | MS.gene32823:CDS |
| AGAACACCAACCCTACCATT+AGG | 0.466222 | 3.1:+82260441 | None:intergenic |
| AGAAGGCGGGGCCTGGCTAG+AGG | 0.466470 | 3.1:+82252246 | None:intergenic |
| TACAGTCAACCTCCTTCCTC+TGG | 0.467231 | 3.1:-82252667 | MS.gene32823:CDS |
| TGATTGCGGAGCACCGTTAT+CGG | 0.468350 | 3.1:+82260542 | None:intergenic |
| GTTGGAAGTGTGCCCCTCTT+GGG | 0.469268 | 3.1:+82252498 | None:intergenic |
| TTGCTGATTCAATTTGATCA+GGG | 0.472599 | 3.1:+82258836 | None:intergenic |
| TCGCAGCAAGGTGGTAGTTA+TGG | 0.474269 | 3.1:-82260486 | MS.gene32823:CDS |
| AAGAAGATTGAAATACCTAA+TGG | 0.476293 | 3.1:-82260456 | MS.gene32823:CDS |
| GACCCATCAGCTGGCTGTGG+AGG | 0.477036 | 3.1:+82252700 | None:intergenic |
| GTTGGCCTTATAATTGGTAA+AGG | 0.477296 | 3.1:-82259138 | MS.gene32823:CDS |
| GAAGTGTGCCCCTCTTGGGT+TGG | 0.479594 | 3.1:+82252502 | None:intergenic |
| TTATGGTGCTAGTTATGCTC+AGG | 0.481239 | 3.1:-82252092 | MS.gene32823:CDS |
| GAAGGCGGGGCCTGGCTAGA+GGG | 0.486048 | 3.1:+82252247 | None:intergenic |
| GGGTATGGTCCGCAATCATA+TGG | 0.486408 | 3.1:-82252175 | MS.gene32823:CDS |
| GGTTATGGCTATGGGCAACC+TGG | 0.488138 | 3.1:-82252913 | MS.gene32823:CDS |
| CCTAGCCCAGCAGGAGGCTA+TGG | 0.490924 | 3.1:-82252283 | MS.gene32823:CDS |
| GCTGAGCATATCCAGAAGGC+GGG | 0.493910 | 3.1:+82252233 | None:intergenic |
| CTTCTGGCGGTGGCACTAGA+CGG | 0.497957 | 3.1:-82259312 | MS.gene32823:CDS |
| GATGGACCAGAGTATGATCC+AGG | 0.501151 | 3.1:+82252895 | None:intergenic |
| TCACAGTCACCTAGCCCAGC+AGG | 0.505105 | 3.1:-82252292 | MS.gene32823:CDS |
| TTCTGTTGATGTATCACCTG+GGG | 0.507849 | 3.1:+82258882 | None:intergenic |
| ACCAGGACAGGGTTATGGTC+AGG | 0.508383 | 3.1:-82252635 | MS.gene32823:CDS |
| CCCAGCAACAGCAAAATCCT+GGG | 0.508607 | 3.1:-82252726 | MS.gene32823:CDS |
| CTGCTCCCAGTTATGGCAGT+GGG | 0.512052 | 3.1:-82252531 | MS.gene32823:CDS |
| ATCTGCTTGTAATCCATAGT+TGG | 0.512974 | 3.1:+82252480 | None:intergenic |
| TCAGCAGAAGAAACAGCATC+AGG | 0.513260 | 3.1:+82260294 | None:intergenic |
| TATGGAAGTCAACCACAGTC+TGG | 0.513429 | 3.1:-82252382 | MS.gene32823:CDS |
| TGCTGATTCAATTTGATCAG+GGG | 0.517465 | 3.1:+82258837 | None:intergenic |
| CTTGGTTCGTTTGGGATCGT+AGG | 0.519590 | 3.1:+82260566 | None:intergenic |
| GAAATACCTAATGGTAGGGT+TGG | 0.520361 | 3.1:-82260447 | MS.gene32823:CDS |
| GCTCTCTGAGTGCCTAACTC+TGG | 0.522190 | 3.1:+82252211 | None:intergenic |
| CCAGTTGGCGGAATATCCAC+CGG | 0.522965 | 3.1:+82252819 | None:intergenic |
| CAAGGTGGCCAGCCTAGCTA+TGG | 0.524469 | 3.1:-82252145 | MS.gene32823:CDS |
| GACCATAACCCTGTCCTGGT+TGG | 0.526303 | 3.1:+82252638 | None:intergenic |
| ATAGGCCGCTTGGGAGGTAG+GGG | 0.527994 | 3.1:+82252402 | None:intergenic |
| GCCTTGCTGGGCAACAGTAG+TGG | 0.528254 | 3.1:+82252438 | None:intergenic |
| GCACCAGTGCAACCAGGGTA+TGG | 0.529757 | 3.1:-82252190 | MS.gene32823:CDS |
| AGTTCGATGTCCGTGGCGGT+GGG | 0.530955 | 3.1:+82260666 | None:intergenic |
| ATCCCGACCACCGTCTAGCT+GGG | 0.531596 | 3.1:-82252965 | MS.gene32823:CDS |
| AACAAGCTGGTTATGGCTAT+GGG | 0.531625 | 3.1:-82252921 | MS.gene32823:CDS |
| AGTCGATTGGTCCCAGTTGG+CGG | 0.531961 | 3.1:+82252807 | None:intergenic |
| TATCCACCGGGTTGCTGAGG+AGG | 0.532429 | 3.1:+82252832 | None:intergenic |
| GTCAGCATATCCCTCTAGCC+AGG | 0.533284 | 3.1:-82252257 | MS.gene32823:CDS |
| GAGCCCAGCTAGACGGTGGT+CGG | 0.534258 | 3.1:+82252962 | None:intergenic |
| GGTGGAGTCTGGCCATAGCT+AGG | 0.535763 | 3.1:+82252133 | None:intergenic |
| GGTGTTCTTATTGGTAAAGG+AGG | 0.535918 | 3.1:-82260426 | MS.gene32823:CDS |
| GCAGACCCATCAGCTGGCTG+TGG | 0.536196 | 3.1:+82252697 | None:intergenic |
| GCTGAAGCTGGGGCTTCTGG+CGG | 0.536744 | 3.1:-82259325 | MS.gene32823:CDS |
| GGATATGCTCAGCCAGAGTT+AGG | 0.536855 | 3.1:-82252223 | MS.gene32823:CDS |
| GCAGGAGGAGCCCAGCTAGA+CGG | 0.538714 | 3.1:+82252955 | None:intergenic |
| TTATTAACTAGGCTGAAGCT+GGG | 0.541792 | 3.1:-82259336 | MS.gene32823:intron |
| GCTGCTCCTGCACAACAAGC+TGG | 0.542982 | 3.1:-82252934 | MS.gene32823:CDS |
| TCTGCTCCCAGTTATGGCAG+TGG | 0.543356 | 3.1:-82252532 | MS.gene32823:CDS |
| ATGCCTCAGCCACCATATGC+AGG | 0.544233 | 3.1:-82252859 | MS.gene32823:CDS |
| GCTGGGCAACAGTAGTGGGT+TGG | 0.546458 | 3.1:+82252443 | None:intergenic |
| GCTCGTCTTCTCAGCGTCAC+CGG | 0.548114 | 3.1:-82260603 | MS.gene32823:CDS |
| TTTCTGTTGATGTATCACCT+GGG | 0.548846 | 3.1:+82258881 | None:intergenic |
| CTGATCCTAATTCTCAGACT+AGG | 0.549418 | 3.1:-82260338 | MS.gene32823:CDS |
| TGAGGAGGATAGCCTGCATA+TGG | 0.549695 | 3.1:+82252847 | None:intergenic |
| CAGAGAGCACCAGTGCAACC+AGG | 0.550434 | 3.1:-82252196 | MS.gene32823:CDS |
| TAAGCAGGTGGATTTGCACT+TGG | 0.550457 | 3.1:+82252322 | None:intergenic |
| AAGAGTATGCAAGCTTCTAC+CGG | 0.552343 | 3.1:-82259102 | MS.gene32823:CDS |
| TAGCCTGCATATGGTGGCTG+AGG | 0.553849 | 3.1:+82252856 | None:intergenic |
| GGACCATACCCTGGTTGCAC+TGG | 0.555058 | 3.1:+82252187 | None:intergenic |
| GGCTATCCTCCTCAGCAACC+CGG | 0.555442 | 3.1:-82252838 | MS.gene32823:CDS |
| AGTGGGTTGGGAAGTTTGGG+AGG | 0.555622 | 3.1:+82252456 | None:intergenic |
| AGATTGAAATACCTAATGGT+AGG | 0.556097 | 3.1:-82260452 | MS.gene32823:CDS |
| AAACGAACCAAGTCCGATAA+CGG | 0.556846 | 3.1:-82260555 | MS.gene32823:CDS |
| TTGGTTAATCAAATCCTCAC+TGG | 0.558998 | 3.1:-82258808 | MS.gene32823:CDS |
| TACGGTAGCATAGCCTTGCT+GGG | 0.559089 | 3.1:+82252426 | None:intergenic |
| TCCTCTGGTTATAGCCAACC+AGG | 0.559096 | 3.1:-82252652 | MS.gene32823:CDS |
| CCACAGTCTGGTTATGGACC+TGG | 0.560474 | 3.1:-82252370 | MS.gene32823:CDS |
| GCGCAACAACAATCTGGGTA+TGG | 0.561377 | 3.1:-82252592 | MS.gene32823:CDS |
| CGGTGGATATTCCGCCAACT+GGG | 0.563001 | 3.1:-82252818 | MS.gene32823:CDS |
| GAGGGAGGAGCACCATAACC+AGG | 0.563328 | 3.1:+82252352 | None:intergenic |
| CTCAGAAATTCAGGGAACTC+AGG | 0.566464 | 3.1:-82253012 | MS.gene32823:CDS |
| GAGAACCTGAATTCGTGCTC+CGG | 0.566604 | 3.1:+82259083 | None:intergenic |
| GCTCCATCGCTAGCATACGC+TGG | 0.567046 | 3.1:+82252067 | None:intergenic |
| CTGTATGCAGACCCATCAGC+TGG | 0.570591 | 3.1:+82252691 | None:intergenic |
| CACTTGCATGAGTAGACTGC+TGG | 0.572808 | 3.1:+82252773 | None:intergenic |
| TAGCTAGGCTGGCCACCTTG+AGG | 0.574664 | 3.1:+82252148 | None:intergenic |
| GGCCTTATAATTGGTAAAGG+AGG | 0.574874 | 3.1:-82259135 | MS.gene32823:CDS |
| GTAGGAGAGTGGTGGAGCGC+CGG | 0.574920 | 3.1:+82260584 | None:intergenic |
| CCTTGCTGGGCAACAGTAGT+GGG | 0.574987 | 3.1:+82252439 | None:intergenic |
| AGAATCGTCTCAGAAATTCA+GGG | 0.575702 | 3.1:-82253020 | MS.gene32823:CDS |
| GGGAGTAATCCAACCCAAGA+GGG | 0.576300 | 3.1:-82252511 | MS.gene32823:CDS |
| ACTGACCATAGCCTCCTGCT+GGG | 0.577432 | 3.1:+82252278 | None:intergenic |
| GGCTGAGCATATCCAGAAGG+CGG | 0.579823 | 3.1:+82252232 | None:intergenic |
| GCTCCAGCGTATGCTAGCGA+TGG | 0.580238 | 3.1:-82252070 | MS.gene32823:CDS |
| CAATCATATGGTGCTCCTCA+AGG | 0.582124 | 3.1:-82252163 | MS.gene32823:CDS |
| GAATATCCACCGGGTTGCTG+AGG | 0.583120 | 3.1:+82252829 | None:intergenic |
| ATAACGGTGCTCCGCAATCA+GGG | 0.583366 | 3.1:-82260539 | MS.gene32823:CDS |
| TGAGTAGACTGCTGGTGAGA+TGG | 0.584276 | 3.1:+82252781 | None:intergenic |
| GATTGAAATACCTAATGGTA+GGG | 0.585821 | 3.1:-82260451 | MS.gene32823:CDS |
| AGCAGTCGATTGGTCCCAGT+TGG | 0.586343 | 3.1:+82252804 | None:intergenic |
| AGAAATTCAGGGAACTCAGG+TGG | 0.588147 | 3.1:-82253009 | MS.gene32823:CDS |
| GGGCAACCTGGATCATACTC+TGG | 0.588895 | 3.1:-82252901 | MS.gene32823:CDS |
| TGGCGGTGGCACTAGACGGA+TGG | 0.589779 | 3.1:-82259308 | MS.gene32823:CDS |
| CCCACTACTGTTGCCCAGCA+AGG | 0.593544 | 3.1:-82252439 | MS.gene32823:CDS |
| TTACTCCCACTGCCATAACT+GGG | 0.595665 | 3.1:+82252526 | None:intergenic |
| ATAATGCGCAACAACAATCT+GGG | 0.598425 | 3.1:-82252597 | MS.gene32823:CDS |
| CGTTTGGGATCGTAGGAGAG+TGG | 0.599323 | 3.1:+82260573 | None:intergenic |
| ACGGATGGTTGCACAATCTG+GGG | 0.600123 | 3.1:-82259293 | MS.gene32823:CDS |
| TGTTGTGCAGGAGCAGCAGG+AGG | 0.605854 | 3.1:+82252940 | None:intergenic |
| GAAATTCAGGGAACTCAGGT+GGG | 0.606222 | 3.1:-82253008 | MS.gene32823:CDS |
| GACTGTGATTGACCATAAGC+AGG | 0.606917 | 3.1:+82252307 | None:intergenic |
| CATCAATGAGGTCCTTGCTG+AGG | 0.607914 | 3.1:-82260265 | MS.gene32823:intron |
| TCCTAATTCTCAGACTAGGA+TGG | 0.609354 | 3.1:-82260334 | MS.gene32823:CDS |
| GGTTATAGCCAACCAGGACA+GGG | 0.609709 | 3.1:-82252646 | MS.gene32823:CDS |
| CAGTTGGCGGAATATCCACC+GGG | 0.609806 | 3.1:+82252820 | None:intergenic |
| GGTGAGATGGAGCAGTCGAT+TGG | 0.609946 | 3.1:+82252794 | None:intergenic |
| CCACCTTGCTGCGAGTATTG+CGG | 0.611213 | 3.1:+82260495 | None:intergenic |
| TAAGAACTATTTCCATATGA+CGG | 0.615919 | 3.1:+82252112 | None:intergenic |
| GGTTATGGTCAGGAAAGCTA+TGG | 0.616846 | 3.1:-82252625 | MS.gene32823:CDS |
| TTGGGATCGTAGGAGAGTGG+TGG | 0.618282 | 3.1:+82260576 | None:intergenic |
| CAGCAGTCTACTCATGCAAG+TGG | 0.623206 | 3.1:-82252772 | MS.gene32823:CDS |
| GGAGGAGCCCAGCTAGACGG+TGG | 0.623688 | 3.1:+82252958 | None:intergenic |
| AGACTGTGGTTGACTTCCAT+AGG | 0.624998 | 3.1:+82252384 | None:intergenic |
| TAATCAAATCCTCACTGGTG+AGG | 0.625790 | 3.1:-82258803 | MS.gene32823:intron |
| TCTGTTGATGTATCACCTGG+GGG | 0.627155 | 3.1:+82258883 | None:intergenic |
| ACTTCCATAGGCCGCTTGGG+AGG | 0.629551 | 3.1:+82252396 | None:intergenic |
| TCCTGGTTGGCTATAACCAG+AGG | 0.630777 | 3.1:+82252651 | None:intergenic |
| GGAGGATAGCCTGCATATGG+TGG | 0.632205 | 3.1:+82252850 | None:intergenic |
| TATGATTGCGGACCATACCC+TGG | 0.632611 | 3.1:+82252178 | None:intergenic |
| GGCATGTTATAATGCGGTGA+TGG | 0.632872 | 3.1:+82252877 | None:intergenic |
| TGCTGAGAAACTCATCAATG+AGG | 0.634906 | 3.1:-82260277 | MS.gene32823:CDS |
| GACTTCGAGTTCGATGTCCG+TGG | 0.636506 | 3.1:+82260659 | None:intergenic |
| CAAACATATGATCAGCAACA+AGG | 0.642194 | 3.1:-82252562 | MS.gene32823:CDS |
| TATTAACTAGGCTGAAGCTG+GGG | 0.642830 | 3.1:-82259335 | MS.gene32823:intron |
| TCAGGTGGGTATACTCAGCA+AGG | 0.645334 | 3.1:-82252994 | MS.gene32823:CDS |
| CGATGAACAACCCACCGCCA+CGG | 0.645490 | 3.1:-82260676 | MS.gene32823:CDS |
| AAGCCGCAATACTCGCAGCA+AGG | 0.647111 | 3.1:-82260498 | MS.gene32823:CDS |
| TAAGAATCAAACCCTGATTG+CGG | 0.648437 | 3.1:+82260528 | None:intergenic |
| AGAGAGCACCAGTGCAACCA+GGG | 0.650050 | 3.1:-82252195 | MS.gene32823:CDS |
| GGTTGGCTATAACCAGAGGA+AGG | 0.652858 | 3.1:+82252655 | None:intergenic |
| CCAAGAAACAAACCTCAGCA+AGG | 0.654175 | 3.1:+82260253 | None:intergenic |
| CTGAGCATATCCAGAAGGCG+GGG | 0.654248 | 3.1:+82252234 | None:intergenic |
| TCTGGCTGAGCATATCCAGA+AGG | 0.655491 | 3.1:+82252229 | None:intergenic |
| TGGCTATAACCAGAGGAAGG+AGG | 0.658440 | 3.1:+82252658 | None:intergenic |
| TAGCGATGGAGCAACTACAC+AGG | 0.661206 | 3.1:-82252056 | MS.gene32823:CDS |
| CGGATGGTTGCACAATCTGG+GGG | 0.666739 | 3.1:-82259292 | MS.gene32823:CDS |
| ACTACACAGGCTGTTCCACA+GGG | 0.669431 | 3.1:-82252043 | MS.gene32823:CDS |
| CCAGCAACAGCAAAATCCTG+GGG | 0.670269 | 3.1:-82252725 | MS.gene32823:CDS |
| TGAGGAGCACCATATGATTG+CGG | 0.676376 | 3.1:+82252166 | None:intergenic |
| TTCGAGTTCGATGTCCGTGG+CGG | 0.677834 | 3.1:+82260662 | None:intergenic |
| CAGTCACCTAGCCCAGCAGG+AGG | 0.679822 | 3.1:-82252289 | MS.gene32823:CDS |
| TGGGAGTAATCCAACCCAAG+AGG | 0.681350 | 3.1:-82252512 | MS.gene32823:CDS |
| GGAGTAATCCAACCCAAGAG+GGG | 0.687207 | 3.1:-82252510 | MS.gene32823:CDS |
| CCGCAATACTCGCAGCAAGG+TGG | 0.697265 | 3.1:-82260495 | MS.gene32823:CDS |
| TCATATGGTGCTCCTCAAGG+TGG | 0.706407 | 3.1:-82252160 | MS.gene32823:CDS |
| GAACTATTTCCATATGACGG+TGG | 0.711749 | 3.1:+82252115 | None:intergenic |
| ACTTTAGAAACACTGCCCTG+TGG | 0.711905 | 3.1:+82252028 | None:intergenic |
| TGTGATTGACCATAAGCAGG+TGG | 0.719303 | 3.1:+82252310 | None:intergenic |
| TATCCTCCTCAGCAACCCGG+TGG | 0.720805 | 3.1:-82252835 | MS.gene32823:CDS |
| GGTGACGCTGAGAAGACGAG+CGG | 0.728767 | 3.1:+82260605 | None:intergenic |
| CCAGGTCCATAACCAGACTG+TGG | 0.734270 | 3.1:+82252370 | None:intergenic |
| CGTAGCCCCTACCTCCCAAG+CGG | 0.734777 | 3.1:-82252407 | MS.gene32823:CDS |
| CAGCAACAGCAAAATCCTGG+GGG | 0.736266 | 3.1:-82252724 | MS.gene32823:CDS |
| GGCTGAGGCATGTTATAATG+CGG | 0.738374 | 3.1:+82252871 | None:intergenic |
| GATAACATACCTCACCAGTG+AGG | 0.751081 | 3.1:+82258794 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 82252012 | 82260739 | 82252012 | ID=MS.gene32823 |
| chr3.1 | mRNA | 82252012 | 82260739 | 82252012 | ID=MS.gene32823.t1;Parent=MS.gene32823 |
| chr3.1 | exon | 82260266 | 82260739 | 82260266 | ID=MS.gene32823.t1.exon1;Parent=MS.gene32823.t1 |
| chr3.1 | CDS | 82260266 | 82260739 | 82260266 | ID=cds.MS.gene32823.t1;Parent=MS.gene32823.t1 |
| chr3.1 | exon | 82259258 | 82259347 | 82259258 | ID=MS.gene32823.t1.exon2;Parent=MS.gene32823.t1 |
| chr3.1 | CDS | 82259258 | 82259347 | 82259258 | ID=cds.MS.gene32823.t1;Parent=MS.gene32823.t1 |
| chr3.1 | exon | 82259089 | 82259160 | 82259089 | ID=MS.gene32823.t1.exon3;Parent=MS.gene32823.t1 |
| chr3.1 | CDS | 82259089 | 82259160 | 82259089 | ID=cds.MS.gene32823.t1;Parent=MS.gene32823.t1 |
| chr3.1 | exon | 82258804 | 82258923 | 82258804 | ID=MS.gene32823.t1.exon4;Parent=MS.gene32823.t1 |
| chr3.1 | CDS | 82258804 | 82258923 | 82258804 | ID=cds.MS.gene32823.t1;Parent=MS.gene32823.t1 |
| chr3.1 | exon | 82252012 | 82253040 | 82252012 | ID=MS.gene32823.t1.exon5;Parent=MS.gene32823.t1 |
| chr3.1 | CDS | 82252012 | 82253040 | 82252012 | ID=cds.MS.gene32823.t1;Parent=MS.gene32823.t1 |
| Gene Sequence |
| Protein sequence |
