Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32857.t1 | XP_013461810.1 | 94.3 | 714 | 34 | 1 | 1 | 714 | 1 | 707 | 0.00E+00 | 1194.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32857.t1 | Q5UNY4 | 33.2 | 373 | 211 | 10 | 326 | 678 | 135 | 489 | 9.6e-50 | 199.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32857.t1 | A0A072VCH4 | 94.3 | 714 | 34 | 1 | 1 | 714 | 1 | 707 | 0.0e+00 | 1194.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050937 | MS.gene32857 | 0.818248 | 2.16E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32857.t1 | MTR_3g103410 | 95.658 | 714 | 24 | 1 | 1 | 714 | 1 | 707 | 0.0 | 1343 |
| MS.gene32857.t1 | MTR_6g445440 | 66.850 | 727 | 132 | 7 | 4 | 714 | 3 | 636 | 0.0 | 947 |
| MS.gene32857.t1 | MTR_5g045130 | 69.271 | 576 | 95 | 6 | 143 | 714 | 2 | 499 | 0.0 | 778 |
| MS.gene32857.t1 | MTR_5g045160 | 79.792 | 480 | 52 | 4 | 235 | 714 | 230 | 664 | 0.0 | 760 |
| MS.gene32857.t1 | MTR_5g045160 | 68.649 | 185 | 38 | 1 | 3 | 167 | 2 | 186 | 7.02e-80 | 268 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32857.t1 | AT5G13210 | 63.556 | 450 | 130 | 3 | 288 | 714 | 235 | 673 | 0.0 | 592 |
| MS.gene32857.t1 | AT5G13210 | 54.595 | 185 | 73 | 2 | 3 | 176 | 2 | 186 | 9.10e-60 | 214 |
| MS.gene32857.t1 | AT5G43400 | 61.470 | 449 | 133 | 5 | 294 | 714 | 219 | 655 | 0.0 | 553 |
| MS.gene32857.t1 | AT5G43400 | 53.684 | 190 | 77 | 3 | 1 | 179 | 1 | 190 | 2.65e-63 | 223 |
| MS.gene32857.t1 | AT3G24780 | 62.830 | 417 | 119 | 2 | 288 | 668 | 287 | 703 | 0.0 | 546 |
| MS.gene32857.t1 | AT3G24780 | 67.742 | 124 | 40 | 0 | 41 | 164 | 107 | 230 | 2.11e-52 | 194 |
| MS.gene32857.t1 | AT5G43390 | 59.060 | 447 | 145 | 6 | 294 | 714 | 209 | 643 | 2.55e-175 | 516 |
| MS.gene32857.t1 | AT5G43390 | 53.261 | 184 | 79 | 3 | 1 | 182 | 1 | 179 | 1.48e-60 | 215 |
Find 209 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTCCATTCTTGTTTC+TGG | -0.005923 | 3.1:+81863107 | None:intergenic |
| GTCCCTTCCCTTGCTGAATT+TGG | 0.166800 | 3.1:-81863193 | MS.gene32857:CDS |
| AAAGAGGTTTGAGAAGTATT+TGG | 0.190204 | 3.1:-81862255 | MS.gene32857:CDS |
| TCATGACATTATTCGGTCTT+TGG | 0.197358 | 3.1:-81862183 | MS.gene32857:CDS |
| GCCTCAGCTTCATGTGATTC+AGG | 0.225556 | 3.1:-81861946 | MS.gene32857:CDS |
| ATAGGGTTCGTGATCGTTTA+AGG | 0.225810 | 3.1:-81862421 | MS.gene32857:CDS |
| AGTCTCCGGAGGAGAGTTTC+GGG | 0.227712 | 3.1:+81863367 | None:intergenic |
| ATATTGGATGTCGCTGTAAA+TGG | 0.230642 | 3.1:-81861840 | MS.gene32857:CDS |
| GGAGGTTACAGACAAGTTTA+AGG | 0.239461 | 3.1:+81863311 | None:intergenic |
| GAATCTGCTGAAATTGTTCT+TGG | 0.240842 | 3.1:-81861583 | MS.gene32857:CDS |
| TGCTTCCTCATGACATTATT+CGG | 0.263127 | 3.1:-81862190 | MS.gene32857:CDS |
| GCTTCTATGCCGCTGCTCTT+TGG | 0.266382 | 3.1:-81863252 | MS.gene32857:CDS |
| GCTTTCTGAGTGGCCGGCAC+TGG | 0.266848 | 3.1:+81861633 | None:intergenic |
| AGAAGACGGTAAAGGATTTC+TGG | 0.284365 | 3.1:+81863154 | None:intergenic |
| CGGTTGACTCTTCATTTGAT+AGG | 0.290913 | 3.1:-81862526 | MS.gene32857:CDS |
| CATGACATTATTCGGTCTTT+GGG | 0.290932 | 3.1:-81862182 | MS.gene32857:CDS |
| CTTTCTGAGTGGCCGGCACT+GGG | 0.294884 | 3.1:+81861634 | None:intergenic |
| CTTGCTGTGTGTGATGTCTC+TGG | 0.301456 | 3.1:-81862074 | MS.gene32857:CDS |
| GACATTAGAAGCCAGGGTTT+TGG | 0.301639 | 3.1:+81863213 | None:intergenic |
| GAGTTGCCTGAGGTGTTTAT+TGG | 0.306469 | 3.1:-81862365 | MS.gene32857:CDS |
| AAGTCTCCGGAGGAGAGTTT+CGG | 0.307135 | 3.1:+81863366 | None:intergenic |
| AGTTGCCTGAGGTGTTTATT+GGG | 0.312322 | 3.1:-81862364 | MS.gene32857:CDS |
| AAGGGTGGTGAGTGGGTTAT+AGG | 0.313785 | 3.1:+81863330 | None:intergenic |
| TGGAGATGGTGGAGAGGTGG+CGG | 0.346229 | 3.1:-81862156 | MS.gene32857:CDS |
| GGAAATTGATTCCTTACAAC+AGG | 0.348079 | 3.1:-81862331 | MS.gene32857:CDS |
| ATCAAGCATCTGCAAACTCT+TGG | 0.358801 | 3.1:-81861758 | MS.gene32857:CDS |
| GCCTTCACGATCGGACTTGC+CGG | 0.365526 | 3.1:+81863273 | None:intergenic |
| AGGAGGCGCATTATGCTTAT+AGG | 0.369882 | 3.1:-81862439 | MS.gene32857:CDS |
| GCTATGGAAGCTGCAATTGC+TGG | 0.375178 | 3.1:-81861498 | MS.gene32857:CDS |
| TTAGTGTCATTGGTGGGTTT+TGG | 0.376605 | 3.1:+81863470 | None:intergenic |
| GAAGTACCGAAAAGGGGTTT+TGG | 0.380728 | 3.1:+81862915 | None:intergenic |
| ATATGCGATCAAATACCTTC+TGG | 0.382272 | 3.1:+81861859 | None:intergenic |
| GGGTGGAGATGGTGGAGAGG+TGG | 0.389441 | 3.1:-81862159 | MS.gene32857:CDS |
| GAAGGTATTTGATCGCATAT+TGG | 0.402007 | 3.1:-81861856 | MS.gene32857:CDS |
| GGTGCCGTTGAGGAAGGTTT+TGG | 0.404840 | 3.1:-81862387 | MS.gene32857:CDS |
| ACAATCTTCTTCTCTTTCTT+CGG | 0.408408 | 3.1:+81862710 | None:intergenic |
| GATGTCTCTGGGAGTATGAC+TGG | 0.411259 | 3.1:-81862062 | MS.gene32857:CDS |
| GGAGGCGCATTATGCTTATA+GGG | 0.411872 | 3.1:-81862438 | MS.gene32857:CDS |
| GTTTGTGAGGAAGATGGATT+GGG | 0.416637 | 3.1:-81861898 | MS.gene32857:CDS |
| AAATTAGTCTTGCTGCGAAA+TGG | 0.427219 | 3.1:-81862556 | MS.gene32857:CDS |
| ACTAGGAAGTATAGAGAGAA+AGG | 0.427301 | 3.1:-81861714 | MS.gene32857:CDS |
| CACAACTAGTTTCTGATACT+CGG | 0.428515 | 3.1:+81861473 | None:intergenic |
| AGTTTGTGAGGAAGATGGAT+TGG | 0.430138 | 3.1:-81861899 | MS.gene32857:CDS |
| TAATCGTGAAGTACCGAAAA+GGG | 0.430475 | 3.1:+81862908 | None:intergenic |
| TATGGACGTGTGTGTGGCAT+TGG | 0.437885 | 3.1:-81862033 | MS.gene32857:CDS |
| TGCTGCGAAATGGTGTCCTT+CGG | 0.445450 | 3.1:-81862546 | MS.gene32857:CDS |
| GAGGGATGAGGCGAGGGCTG+CGG | 0.448398 | 3.1:-81862846 | MS.gene32857:CDS |
| GGGCTGCGGCGAGGGCTAAG+AGG | 0.455206 | 3.1:-81862832 | MS.gene32857:CDS |
| ACAACTAGTTTCTGATACTC+GGG | 0.457651 | 3.1:+81861474 | None:intergenic |
| GACAGAGTTTGTGAGGAAGA+TGG | 0.458990 | 3.1:-81861904 | MS.gene32857:CDS |
| TATACTTCCTAGTGATTGCT+TGG | 0.460791 | 3.1:+81861724 | None:intergenic |
| TATTGGATGTCGCTGTAAAT+GGG | 0.461124 | 3.1:-81861839 | MS.gene32857:CDS |
| TGAGGCGAGGGCTGCGGCGA+GGG | 0.461273 | 3.1:-81862840 | MS.gene32857:CDS |
| CTCCGCGGCATCCGTGGTAC+CGG | 0.461336 | 3.1:-81863292 | MS.gene32857:CDS |
| CAGGGTTGCGTCTGTGGCCA+TGG | 0.461754 | 3.1:-81862312 | MS.gene32857:CDS |
| TATTTGGAGGATGTGAAAGC+GGG | 0.463495 | 3.1:-81862239 | MS.gene32857:CDS |
| CACTCAGAAAGCAGTGGCGC+TGG | 0.468283 | 3.1:-81861622 | MS.gene32857:CDS |
| GTGTGTGGCATTGGGATTGT+TGG | 0.469061 | 3.1:-81862024 | MS.gene32857:CDS |
| TCAAGCATCTGCAAACTCTT+GGG | 0.470390 | 3.1:-81861757 | MS.gene32857:CDS |
| GAGGTTACAGACAAGTTTAA+GGG | 0.471004 | 3.1:+81863312 | None:intergenic |
| GAAGACGGTAAAGGATTTCT+GGG | 0.472411 | 3.1:+81863155 | None:intergenic |
| GTGGATGATTTGCTCAAGAA+AGG | 0.473549 | 3.1:-81862113 | MS.gene32857:CDS |
| AGGAATCAATTTCCATCGAT+TGG | 0.473816 | 3.1:+81862340 | None:intergenic |
| GGTTGACTCTTCATTTGATA+GGG | 0.474183 | 3.1:-81862525 | MS.gene32857:CDS |
| CTTCCTCACAAACTCTGTCT+TGG | 0.475579 | 3.1:+81861908 | None:intergenic |
| AAAATTCTATCAAGAACAAT+GGG | 0.475978 | 3.1:-81863008 | MS.gene32857:CDS |
| TTGCTGTGTGTGATGTCTCT+GGG | 0.479823 | 3.1:-81862073 | MS.gene32857:CDS |
| GAAAGAGAAGAAGATTGTAT+TGG | 0.481046 | 3.1:-81862705 | MS.gene32857:CDS |
| AGGAGGATCAGATGATTAAG+AGG | 0.485373 | 3.1:-81861809 | MS.gene32857:CDS |
| GAGGTTTGAGAAGTATTTGG+AGG | 0.487381 | 3.1:-81862252 | MS.gene32857:CDS |
| GGCTGCGGCGAGGGCTAAGA+GGG | 0.487543 | 3.1:-81862831 | MS.gene32857:CDS |
| TCACCAACATTTCTCTCTAC+AGG | 0.488275 | 3.1:-81863436 | MS.gene32857:CDS |
| TGGGCCAACGAGTGTGGTGG+CGG | 0.489398 | 3.1:+81863579 | None:intergenic |
| CTTCATTGTCTGTCAGCAGA+TGG | 0.492060 | 3.1:+81861541 | None:intergenic |
| GGGAAGGGACATTAGAAGCC+AGG | 0.492480 | 3.1:+81863206 | None:intergenic |
| AAGTATAGAGAGAAAGGGTA+TGG | 0.494035 | 3.1:-81861708 | MS.gene32857:CDS |
| CCTCAGCTTCATGTGATTCA+GGG | 0.494334 | 3.1:-81861945 | MS.gene32857:CDS |
| GTATCAGAAACTAGTTGTGC+TGG | 0.495109 | 3.1:-81861469 | MS.gene32857:CDS |
| ATAATCGTGAAGTACCGAAA+AGG | 0.495430 | 3.1:+81862907 | None:intergenic |
| CTGAATTGTGTGAGGAACCT+TGG | 0.496491 | 3.1:-81861998 | MS.gene32857:CDS |
| ACAGACGCAACCCTGTTGTA+AGG | 0.499366 | 3.1:+81862320 | None:intergenic |
| TTTCTGGATCTTGCGTATGT+TGG | 0.499395 | 3.1:+81863123 | None:intergenic |
| CTCGATGGCGACCCCAGTGC+CGG | 0.502159 | 3.1:-81861646 | MS.gene32857:CDS |
| ATTATGAGAAGAAAGAGAAG+AGG | 0.504648 | 3.1:-81862757 | MS.gene32857:CDS |
| AGAGATTGCGGTGAGGGATG+AGG | 0.504746 | 3.1:-81862858 | MS.gene32857:CDS |
| GAGTATGACTGGGATCCCTA+TGG | 0.505208 | 3.1:-81862051 | MS.gene32857:CDS |
| GCCAACGAGTGTGGTGGCGG+TGG | 0.506505 | 3.1:+81863582 | None:intergenic |
| TTACAACAGGGTTGCGTCTG+TGG | 0.507137 | 3.1:-81862318 | MS.gene32857:CDS |
| AAAGCAGTGGCGCTGGTAAG+TGG | 0.507190 | 3.1:-81861615 | MS.gene32857:CDS |
| TGTTTATTGGGGCCAATCGA+TGG | 0.508233 | 3.1:-81862352 | MS.gene32857:CDS |
| TGCGGTGAGGGATGAGGCGA+GGG | 0.508537 | 3.1:-81862852 | MS.gene32857:CDS |
| GGAGTATGAAGGTGTGGAGG+AGG | 0.511393 | 3.1:-81862456 | MS.gene32857:CDS |
| GTGACGGTGGTGTATATCTC+GGG | 0.512300 | 3.1:+81863556 | None:intergenic |
| GTAATCACCTTCCCTTTCCA+AGG | 0.512812 | 3.1:+81861981 | None:intergenic |
| GCCACTGCTTTCTGAGTGGC+CGG | 0.516326 | 3.1:+81861627 | None:intergenic |
| TCATGAAGAAACTTAAAATG+AGG | 0.516979 | 3.1:+81862650 | None:intergenic |
| TTTCCTAGGGAGGAGTATGA+AGG | 0.518283 | 3.1:-81862467 | MS.gene32857:CDS |
| ATTTGTTATCATTTGATCGA+TGG | 0.519081 | 3.1:+81863513 | None:intergenic |
| GAGTGAAGAGATTGCGGTGA+GGG | 0.519795 | 3.1:-81862864 | MS.gene32857:CDS |
| ATGACATTATTCGGTCTTTG+GGG | 0.524131 | 3.1:-81862181 | MS.gene32857:CDS |
| GAAGGTGATATAAGCCCTCT+AGG | 0.525667 | 3.1:-81861522 | MS.gene32857:CDS |
| GGTGACGGTGGTGTATATCT+CGG | 0.526645 | 3.1:+81863555 | None:intergenic |
| TATAAGCCCTCTAGGAGCTA+TGG | 0.526879 | 3.1:-81861514 | MS.gene32857:CDS |
| AATGCCACACACACGTCCAT+AGG | 0.527660 | 3.1:+81862035 | None:intergenic |
| TTTCTGTTAGTGTCATTGGT+GGG | 0.528326 | 3.1:+81863464 | None:intergenic |
| GACATTATTCGGTCTTTGGG+GGG | 0.529268 | 3.1:-81862179 | MS.gene32857:CDS |
| CTTCTCTTTATAAAACTCCA+TGG | 0.529872 | 3.1:+81862295 | None:intergenic |
| GGCATAGAAGCCTTCACGAT+CGG | 0.537064 | 3.1:+81863264 | None:intergenic |
| TTTGTTAGTGGTGGCGGTGA+CGG | 0.537839 | 3.1:+81863540 | None:intergenic |
| CTGATTACCAAGCAATCACT+AGG | 0.538407 | 3.1:-81861731 | MS.gene32857:CDS |
| TGCTCAAGAAAGGGAAGATG+AGG | 0.538489 | 3.1:-81862103 | MS.gene32857:CDS |
| ATGAGGCGAGGGCTGCGGCG+AGG | 0.539072 | 3.1:-81862841 | MS.gene32857:CDS |
| GGGAAGACTACGATCGCTGC+TGG | 0.539340 | 3.1:-81862218 | MS.gene32857:CDS |
| GCAAGATCCAGAAACAAGAA+TGG | 0.540077 | 3.1:-81863114 | MS.gene32857:CDS |
| ATGGACGTGTGTGTGGCATT+GGG | 0.541189 | 3.1:-81862032 | MS.gene32857:CDS |
| TGTAACCTCCGCGGCATCCG+TGG | 0.543934 | 3.1:-81863298 | MS.gene32857:CDS |
| CAAGTTTAAGGGTGGTGAGT+GGG | 0.544099 | 3.1:+81863323 | None:intergenic |
| GAAAATTCTATCAAGAACAA+TGG | 0.546038 | 3.1:-81863009 | MS.gene32857:CDS |
| TGGAAGAAGAAGTCGAGACA+TGG | 0.548748 | 3.1:+81863409 | None:intergenic |
| TACCTTGCAGAAGACGGTAA+AGG | 0.552943 | 3.1:+81863146 | None:intergenic |
| GGGGTTTAACTTGAACCAAA+GGG | 0.555835 | 3.1:+81862954 | None:intergenic |
| CTCGGGTGGGCCAACGAGTG+TGG | 0.556190 | 3.1:+81863573 | None:intergenic |
| GGGTGGGCCAACGAGTGTGG+TGG | 0.563217 | 3.1:+81863576 | None:intergenic |
| ACACCTTCATACTCCTCCCT+AGG | 0.564028 | 3.1:+81862464 | None:intergenic |
| AACCAAATTCAGCAAGGGAA+GGG | 0.566367 | 3.1:+81863191 | None:intergenic |
| TGACATTATTCGGTCTTTGG+GGG | 0.566528 | 3.1:-81862180 | MS.gene32857:CDS |
| TTGGAATCTGAGAGACTCGA+TGG | 0.569037 | 3.1:-81861661 | MS.gene32857:CDS |
| GGAGGAGTATGAAGGTGTGG+AGG | 0.569192 | 3.1:-81862459 | MS.gene32857:CDS |
| ATGCCACACACACGTCCATA+GGG | 0.569765 | 3.1:+81862036 | None:intergenic |
| ATCCTTTACCGTCTTCTGCA+AGG | 0.570084 | 3.1:-81863148 | MS.gene32857:CDS |
| GGGGAGTGTCGGGGACAACA+TGG | 0.570272 | 3.1:+81863389 | None:intergenic |
| TCTCCGGAGGAGAGTTTCGG+GGG | 0.571817 | 3.1:+81863369 | None:intergenic |
| TTGCGGTGAGGGATGAGGCG+AGG | 0.572019 | 3.1:-81862853 | MS.gene32857:CDS |
| CCCTGAATCACATGAAGCTG+AGG | 0.572263 | 3.1:+81861945 | None:intergenic |
| GGAGTTACAGTGGACGAGAA+TGG | 0.572730 | 3.1:-81862135 | MS.gene32857:CDS |
| TGTGTTGGTGCCGTTGAGGA+AGG | 0.572986 | 3.1:-81862393 | MS.gene32857:CDS |
| TGTGTGAGGAACCTTGGAAA+GGG | 0.574082 | 3.1:-81861992 | MS.gene32857:CDS |
| GGAAGGGACATTAGAAGCCA+GGG | 0.574195 | 3.1:+81863207 | None:intergenic |
| ACGGTGGTGTATATCTCGGG+TGG | 0.575504 | 3.1:+81863559 | None:intergenic |
| TTGGCCCCAATAAACACCTC+AGG | 0.575991 | 3.1:+81862359 | None:intergenic |
| CATGAAGAAACTTAAAATGA+GGG | 0.577911 | 3.1:+81862651 | None:intergenic |
| TGGATGATTTGCTCAAGAAA+GGG | 0.578023 | 3.1:-81862112 | MS.gene32857:CDS |
| CTAGGAAGTATAGAGAGAAA+GGG | 0.581276 | 3.1:-81861713 | MS.gene32857:CDS |
| CAGCTTCCATAGCTCCTAGA+GGG | 0.582415 | 3.1:+81861508 | None:intergenic |
| GGTTCGTGATCGTTTAAGGA+AGG | 0.582564 | 3.1:-81862417 | MS.gene32857:CDS |
| ACCATGCTAGTTGAAGTCTC+CGG | 0.584289 | 3.1:+81863353 | None:intergenic |
| GTTGCCTGAGGTGTTTATTG+GGG | 0.585601 | 3.1:-81862363 | MS.gene32857:CDS |
| GGTTTAACTTGAACGAAAGG+AGG | 0.587513 | 3.1:+81862977 | None:intergenic |
| TAACCAAATTCAGCAAGGGA+AGG | 0.588634 | 3.1:+81863190 | None:intergenic |
| GTATTTGGAGGATGTGAAAG+CGG | 0.588845 | 3.1:-81862240 | MS.gene32857:CDS |
| CGCTGTAAATGGGAATCTCA+AGG | 0.590397 | 3.1:-81861829 | MS.gene32857:CDS |
| GAAGTAACCAAATTCAGCAA+GGG | 0.590777 | 3.1:+81863186 | None:intergenic |
| TGCCGGTACCACGGATGCCG+CGG | 0.590984 | 3.1:+81863290 | None:intergenic |
| CGGTGGTGTATATCTCGGGT+GGG | 0.595220 | 3.1:+81863560 | None:intergenic |
| TCCGGAGACTTCAACTAGCA+TGG | 0.595620 | 3.1:-81863354 | MS.gene32857:CDS |
| TGAAGTAACCAAATTCAGCA+AGG | 0.597355 | 3.1:+81863185 | None:intergenic |
| CTCAGCTTCATGTGATTCAG+GGG | 0.597407 | 3.1:-81861944 | MS.gene32857:CDS |
| TTTGTGAGGAAGATGGATTG+GGG | 0.599203 | 3.1:-81861897 | MS.gene32857:CDS |
| GGTTTAACTTGAACCAAAGG+GGG | 0.600927 | 3.1:+81862956 | None:intergenic |
| GCCACCGCCACCACACTCGT+TGG | 0.601442 | 3.1:-81863583 | MS.gene32857:CDS |
| ATGTCTCTGGGAGTATGACT+GGG | 0.602698 | 3.1:-81862061 | MS.gene32857:CDS |
| TTTCTGAGTGGCCGGCACTG+GGG | 0.602919 | 3.1:+81861635 | None:intergenic |
| GATCGGACTTGCCGGTACCA+CGG | 0.606070 | 3.1:+81863281 | None:intergenic |
| GAGAGGTGGCGGAGTTACAG+TGG | 0.606406 | 3.1:-81862145 | MS.gene32857:CDS |
| CAGCGCCACTGCTTTCTGAG+TGG | 0.606568 | 3.1:+81861623 | None:intergenic |
| ACAAGTTTAAGGGTGGTGAG+TGG | 0.610115 | 3.1:+81863322 | None:intergenic |
| CCATCACCACCCCAAAACCC+TGG | 0.617883 | 3.1:-81863224 | MS.gene32857:CDS |
| TTGTGAGGAAGATGGATTGG+GGG | 0.618528 | 3.1:-81861896 | MS.gene32857:CDS |
| AGTCCAAGACAGAGTTTGTG+AGG | 0.622585 | 3.1:-81861911 | MS.gene32857:CDS |
| TAGGGAGGAGTATGAAGGTG+TGG | 0.624294 | 3.1:-81862462 | MS.gene32857:CDS |
| GATATTTGTATTCAGTGACA+TGG | 0.624325 | 3.1:-81861787 | MS.gene32857:CDS |
| ATTTGGAGGATGTGAAAGCG+GGG | 0.632099 | 3.1:-81862238 | MS.gene32857:CDS |
| TGTTGGTACCTTGCAGAAGA+CGG | 0.632980 | 3.1:+81863140 | None:intergenic |
| GCCGGCCACTCAGAAAGCAG+TGG | 0.634703 | 3.1:-81861628 | MS.gene32857:CDS |
| GGAAGAAGAAGTCGAGACAT+GGG | 0.635379 | 3.1:+81863410 | None:intergenic |
| ACCGGCAAGTCCGATCGTGA+AGG | 0.635632 | 3.1:-81863274 | MS.gene32857:CDS |
| TGGCTAAGAAGCTTGTTGAA+CGG | 0.636234 | 3.1:-81862685 | MS.gene32857:CDS |
| GATCCCTATGGACGTGTGTG+TGG | 0.637269 | 3.1:-81862039 | MS.gene32857:CDS |
| AAATTGTTCTTGGACAATGA+AGG | 0.639905 | 3.1:-81861573 | MS.gene32857:CDS |
| GTTAGTGGTGGCGGTGACGG+TGG | 0.643408 | 3.1:+81863543 | None:intergenic |
| CATCTGCTGACAGACAATGA+AGG | 0.644075 | 3.1:-81861540 | MS.gene32857:CDS |
| AACTCCAAAACCTTCCTCAA+CGG | 0.645488 | 3.1:+81862383 | None:intergenic |
| GTCTCCGGAGGAGAGTTTCG+GGG | 0.647607 | 3.1:+81863368 | None:intergenic |
| TCAAATGAAGAGTCAACCGA+AGG | 0.647905 | 3.1:+81862530 | None:intergenic |
| TCGTTTAAGGAAGGATGTGT+TGG | 0.648398 | 3.1:-81862408 | MS.gene32857:CDS |
| TTGCCTGTAGAGAGAAATGT+TGG | 0.651123 | 3.1:+81863433 | None:intergenic |
| AGGATGTGTTGGTGCCGTTG+AGG | 0.652976 | 3.1:-81862397 | MS.gene32857:CDS |
| TTGTGTGAGGAACCTTGGAA+AGG | 0.654898 | 3.1:-81861993 | MS.gene32857:CDS |
| GGGTTTAACTTGAACCAAAG+GGG | 0.656071 | 3.1:+81862955 | None:intergenic |
| CGGTACCACGGATGCCGCGG+AGG | 0.656528 | 3.1:+81863293 | None:intergenic |
| GTTACAGTGGACGAGAATGG+TGG | 0.656838 | 3.1:-81862132 | MS.gene32857:CDS |
| TGTGTGAGAGTATTGCAAAG+AGG | 0.657314 | 3.1:-81862493 | MS.gene32857:CDS |
| AATCGTGAAGTACCGAAAAG+GGG | 0.664349 | 3.1:+81862909 | None:intergenic |
| AAAGACCGAATAATGTCATG+AGG | 0.667681 | 3.1:+81862185 | None:intergenic |
| GTTACAGACAAGTTTAAGGG+TGG | 0.668561 | 3.1:+81863315 | None:intergenic |
| GATGAACACTGATTTCCAGA+AGG | 0.673235 | 3.1:-81861874 | MS.gene32857:CDS |
| GTTGGTGTCTGAATTGTGTG+AGG | 0.673906 | 3.1:-81862006 | MS.gene32857:CDS |
| TTTGATGAGTGAAGAGATTG+CGG | 0.678619 | 3.1:-81862870 | MS.gene32857:CDS |
| TGAGGAACCTTGGAAAGGGA+AGG | 0.678969 | 3.1:-81861988 | MS.gene32857:CDS |
| ATGCTAGTTGAAGTCTCCGG+AGG | 0.682629 | 3.1:+81863356 | None:intergenic |
| GCAGCTTCCATAGCTCCTAG+AGG | 0.684535 | 3.1:+81861507 | None:intergenic |
| GAAATTGATTCCTTACAACA+GGG | 0.685549 | 3.1:-81862330 | MS.gene32857:CDS |
| TCAGCTTCATGTGATTCAGG+GGG | 0.686603 | 3.1:-81861943 | MS.gene32857:CDS |
| ATGGTGAAACCAAAGAGCAG+CGG | 0.699924 | 3.1:+81863243 | None:intergenic |
| CAACTAGTTTCTGATACTCG+GGG | 0.701259 | 3.1:+81861475 | None:intergenic |
| TGAGTGAAGAGATTGCGGTG+AGG | 0.713300 | 3.1:-81862865 | MS.gene32857:CDS |
| CTCCGGAGGAGAGTTTCGGG+GGG | 0.715021 | 3.1:+81863370 | None:intergenic |
| AAACTTGTCTGTAACCTCCG+CGG | 0.727247 | 3.1:-81863307 | MS.gene32857:CDS |
| TGTAAATGGGAATCTCAAGG+AGG | 0.765353 | 3.1:-81861826 | MS.gene32857:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGCTATTTTTTTTTCTAT+AGG | + | chr3.1:81861981-81862000 | None:intergenic | 15.0% |
| !! | AAAATTCTATCAAGAACAAT+GGG | - | chr3.1:81862042-81862061 | MS.gene32857:CDS | 20.0% |
| !!! | ATATTGAGTTTTTGAAATGT+GGG | - | chr3.1:81862461-81862480 | MS.gene32857:CDS | 20.0% |
| ! | AGATTCCAAAAAACTATTTG+AGG | + | chr3.1:81863378-81863397 | None:intergenic | 25.0% |
| ! | CATGAAGAAACTTAAAATGA+GGG | + | chr3.1:81862402-81862421 | None:intergenic | 25.0% |
| ! | GAAAATTCTATCAAGAACAA+TGG | - | chr3.1:81862041-81862060 | MS.gene32857:CDS | 25.0% |
| ! | TCATGAAGAAACTTAAAATG+AGG | + | chr3.1:81862403-81862422 | None:intergenic | 25.0% |
| !! | AGAATTTTCTTACACCAAAA+CGG | + | chr3.1:81862030-81862049 | None:intergenic | 25.0% |
| !! | ATATTTTCTGTTAGTGTCAT+TGG | + | chr3.1:81861593-81861612 | None:intergenic | 25.0% |
| !! | TTTGGATTTTCTTAACCAAA+GGG | + | chr3.1:81862120-81862139 | None:intergenic | 25.0% |
| !! | TTTTGGATTTTCTTAACCAA+AGG | + | chr3.1:81862121-81862140 | None:intergenic | 25.0% |
| !!! | ATTTGTTATCATTTGATCGA+TGG | + | chr3.1:81861540-81861559 | None:intergenic | 25.0% |
| !!! | GATATTGAGTTTTTGAAATG+TGG | - | chr3.1:81862460-81862479 | MS.gene32857:CDS | 25.0% |
| !!! | TTTTGAAGCATGATAAAAAG+AGG | - | chr3.1:81862779-81862798 | MS.gene32857:CDS | 25.0% |
| AAATTGTTCTTGGACAATGA+AGG | - | chr3.1:81863477-81863496 | MS.gene32857:CDS | 30.0% | |
| ACAATCTTCTTCTCTTTCTT+CGG | + | chr3.1:81862343-81862362 | None:intergenic | 30.0% | |
| ATTATGAGAAGAAAGAGAAG+AGG | - | chr3.1:81862293-81862312 | MS.gene32857:CDS | 30.0% | |
| CTTCTCTTTATAAAACTCCA+TGG | + | chr3.1:81862758-81862777 | None:intergenic | 30.0% | |
| GAAAGAGAAGAAGATTGTAT+TGG | - | chr3.1:81862345-81862364 | MS.gene32857:CDS | 30.0% | |
| GATATTTGTATTCAGTGACA+TGG | - | chr3.1:81863263-81863282 | MS.gene32857:CDS | 30.0% | |
| ! | GAAATTGATTCCTTACAACA+GGG | - | chr3.1:81862720-81862739 | MS.gene32857:CDS | 30.0% |
| ! | GAATTTTCTTACACCAAAAC+GGG | + | chr3.1:81862029-81862048 | None:intergenic | 30.0% |
| ! | TCAAAATCAAAAACCCGTTT+TGG | - | chr3.1:81862013-81862032 | MS.gene32857:CDS | 30.0% |
| ! | TTGGATTTTCTTAACCAAAG+GGG | + | chr3.1:81862119-81862138 | None:intergenic | 30.0% |
| ! | TTTGATTCCATTCTTGTTTC+TGG | + | chr3.1:81861946-81861965 | None:intergenic | 30.0% |
| !! | AAAGAGGTTTGAGAAGTATT+TGG | - | chr3.1:81862795-81862814 | MS.gene32857:CDS | 30.0% |
| AAAGACCGAATAATGTCATG+AGG | + | chr3.1:81862868-81862887 | None:intergenic | 35.0% | |
| AAGTATAGAGAGAAAGGGTA+TGG | - | chr3.1:81863342-81863361 | MS.gene32857:CDS | 35.0% | |
| AGGAATCAATTTCCATCGAT+TGG | + | chr3.1:81862713-81862732 | None:intergenic | 35.0% | |
| ATATGCGATCAAATACCTTC+TGG | + | chr3.1:81863194-81863213 | None:intergenic | 35.0% | |
| ATATTGGATGTCGCTGTAAA+TGG | - | chr3.1:81863210-81863229 | MS.gene32857:CDS | 35.0% | |
| ATGACATTATTCGGTCTTTG+GGG | - | chr3.1:81862869-81862888 | MS.gene32857:CDS | 35.0% | |
| CATGACATTATTCGGTCTTT+GGG | - | chr3.1:81862868-81862887 | MS.gene32857:CDS | 35.0% | |
| GAAGTAACCAAATTCAGCAA+GGG | + | chr3.1:81861867-81861886 | None:intergenic | 35.0% | |
| GAATCTGCTGAAATTGTTCT+TGG | - | chr3.1:81863467-81863486 | MS.gene32857:CDS | 35.0% | |
| GAGGTTACAGACAAGTTTAA+GGG | + | chr3.1:81861741-81861760 | None:intergenic | 35.0% | |
| TATACTTCCTAGTGATTGCT+TGG | + | chr3.1:81863329-81863348 | None:intergenic | 35.0% | |
| TATTGGATGTCGCTGTAAAT+GGG | - | chr3.1:81863211-81863230 | MS.gene32857:CDS | 35.0% | |
| TCATGACATTATTCGGTCTT+TGG | - | chr3.1:81862867-81862886 | MS.gene32857:CDS | 35.0% | |
| TGAAGTAACCAAATTCAGCA+AGG | + | chr3.1:81861868-81861887 | None:intergenic | 35.0% | |
| TGCTTCCTCATGACATTATT+CGG | - | chr3.1:81862860-81862879 | MS.gene32857:CDS | 35.0% | |
| TTTGATGAGTGAAGAGATTG+CGG | - | chr3.1:81862180-81862199 | MS.gene32857:CDS | 35.0% | |
| ! | AAAAACTATTTGAGGCACAG+CGG | + | chr3.1:81863370-81863389 | None:intergenic | 35.0% |
| ! | ACAACTAGTTTCTGATACTC+GGG | + | chr3.1:81863579-81863598 | None:intergenic | 35.0% |
| ! | ACTAGGAAGTATAGAGAGAA+AGG | - | chr3.1:81863336-81863355 | MS.gene32857:CDS | 35.0% |
| ! | CACAACTAGTTTCTGATACT+CGG | + | chr3.1:81863580-81863599 | None:intergenic | 35.0% |
| ! | CTAGGAAGTATAGAGAGAAA+GGG | - | chr3.1:81863337-81863356 | MS.gene32857:CDS | 35.0% |
| ! | GAAAATCCAAAACCCCTTTT+CGG | - | chr3.1:81862129-81862148 | MS.gene32857:CDS | 35.0% |
| ! | GGAAATTGATTCCTTACAAC+AGG | - | chr3.1:81862719-81862738 | MS.gene32857:CDS | 35.0% |
| ! | GGTTGACTCTTCATTTGATA+GGG | - | chr3.1:81862525-81862544 | MS.gene32857:CDS | 35.0% |
| ! | TGCAAAGAGGATTTTTCCTA+GGG | - | chr3.1:81862570-81862589 | MS.gene32857:CDS | 35.0% |
| ! | TGGATTTTCTTAACCAAAGG+GGG | + | chr3.1:81862118-81862137 | None:intergenic | 35.0% |
| ! | TTGCAAAGAGGATTTTTCCT+AGG | - | chr3.1:81862569-81862588 | MS.gene32857:CDS | 35.0% |
| ! | TTTCTGTTAGTGTCATTGGT+GGG | + | chr3.1:81861589-81861608 | None:intergenic | 35.0% |
| !! | AAATTAGTCTTGCTGCGAAA+TGG | - | chr3.1:81862494-81862513 | MS.gene32857:CDS | 35.0% |
| !! | ATAATCGTGAAGTACCGAAA+AGG | + | chr3.1:81862146-81862165 | None:intergenic | 35.0% |
| !! | GAAGGTATTTGATCGCATAT+TGG | - | chr3.1:81863194-81863213 | MS.gene32857:CDS | 35.0% |
| !! | TAATCGTGAAGTACCGAAAA+GGG | + | chr3.1:81862145-81862164 | None:intergenic | 35.0% |
| !! | TGGATGATTTGCTCAAGAAA+GGG | - | chr3.1:81862938-81862957 | MS.gene32857:CDS | 35.0% |
| !! | TTTTCTGTTAGTGTCATTGG+TGG | + | chr3.1:81861590-81861609 | None:intergenic | 35.0% |
| !!! | ATCGATGGAAGTTTTGTTAG+TGG | + | chr3.1:81861525-81861544 | None:intergenic | 35.0% |
| !!! | CTGTGCCTCAAATAGTTTTT+TGG | - | chr3.1:81863370-81863389 | MS.gene32857:CDS | 35.0% |
| !!! | TGGGTTTTGGTTTGTTTGAA+GGG | + | chr3.1:81861570-81861589 | None:intergenic | 35.0% |
| AACCAAATTCAGCAAGGGAA+GGG | + | chr3.1:81861862-81861881 | None:intergenic | 40.0% | |
| AACTCCAAAACCTTCCTCAA+CGG | + | chr3.1:81862670-81862689 | None:intergenic | 40.0% | |
| AGAAGACGGTAAAGGATTTC+TGG | + | chr3.1:81861899-81861918 | None:intergenic | 40.0% | |
| AGGAGGATCAGATGATTAAG+AGG | - | chr3.1:81863241-81863260 | MS.gene32857:CDS | 40.0% | |
| AGTTTGTGAGGAAGATGGAT+TGG | - | chr3.1:81863151-81863170 | MS.gene32857:CDS | 40.0% | |
| ATAGGGTTCGTGATCGTTTA+AGG | - | chr3.1:81862629-81862648 | MS.gene32857:CDS | 40.0% | |
| ATCAAGCATCTGCAAACTCT+TGG | - | chr3.1:81863292-81863311 | MS.gene32857:CDS | 40.0% | |
| CTGATTACCAAGCAATCACT+AGG | - | chr3.1:81863319-81863338 | MS.gene32857:CDS | 40.0% | |
| GAAGACGGTAAAGGATTTCT+GGG | + | chr3.1:81861898-81861917 | None:intergenic | 40.0% | |
| GCAAGATCCAGAAACAAGAA+TGG | - | chr3.1:81861936-81861955 | MS.gene32857:CDS | 40.0% | |
| GGAGGTTACAGACAAGTTTA+AGG | + | chr3.1:81861742-81861761 | None:intergenic | 40.0% | |
| GTATCAGAAACTAGTTGTGC+TGG | - | chr3.1:81863581-81863600 | MS.gene32857:CDS | 40.0% | |
| GTATTTGGAGGATGTGAAAG+CGG | - | chr3.1:81862810-81862829 | MS.gene32857:CDS | 40.0% | |
| GTTACAGACAAGTTTAAGGG+TGG | + | chr3.1:81861738-81861757 | None:intergenic | 40.0% | |
| TAACCAAATTCAGCAAGGGA+AGG | + | chr3.1:81861863-81861882 | None:intergenic | 40.0% | |
| TATTTGGAGGATGTGAAAGC+GGG | - | chr3.1:81862811-81862830 | MS.gene32857:CDS | 40.0% | |
| TCAAATGAAGAGTCAACCGA+AGG | + | chr3.1:81862523-81862542 | None:intergenic | 40.0% | |
| TCAAGCATCTGCAAACTCTT+GGG | - | chr3.1:81863293-81863312 | MS.gene32857:CDS | 40.0% | |
| TCACCAACATTTCTCTCTAC+AGG | - | chr3.1:81861614-81861633 | MS.gene32857:CDS | 40.0% | |
| TCGTTTAAGGAAGGATGTGT+TGG | - | chr3.1:81862642-81862661 | MS.gene32857:CDS | 40.0% | |
| TGACATTATTCGGTCTTTGG+GGG | - | chr3.1:81862870-81862889 | MS.gene32857:CDS | 40.0% | |
| TGTAAATGGGAATCTCAAGG+AGG | - | chr3.1:81863224-81863243 | MS.gene32857:CDS | 40.0% | |
| TTGCCTGTAGAGAGAAATGT+TGG | + | chr3.1:81861620-81861639 | None:intergenic | 40.0% | |
| TTTCTGGATCTTGCGTATGT+TGG | + | chr3.1:81861930-81861949 | None:intergenic | 40.0% | |
| ! | AAAGAGGATTTTTCCTAGGG+AGG | - | chr3.1:81862573-81862592 | MS.gene32857:CDS | 40.0% |
| ! | ACATTAGAAGCCAGGGTTTT+GGG | + | chr3.1:81861839-81861858 | None:intergenic | 40.0% |
| ! | AGTTGCCTGAGGTGTTTATT+GGG | - | chr3.1:81862686-81862705 | MS.gene32857:CDS | 40.0% |
| ! | CAACTAGTTTCTGATACTCG+GGG | + | chr3.1:81863578-81863597 | None:intergenic | 40.0% |
| ! | CGCAGCAAGACTAATTTTTG+TGG | + | chr3.1:81862491-81862510 | None:intergenic | 40.0% |
| ! | CGGTTGACTCTTCATTTGAT+AGG | - | chr3.1:81862524-81862543 | MS.gene32857:CDS | 40.0% |
| ! | GTTTGTGAGGAAGATGGATT+GGG | - | chr3.1:81863152-81863171 | MS.gene32857:CDS | 40.0% |
| !! | AATCGTGAAGTACCGAAAAG+GGG | + | chr3.1:81862144-81862163 | None:intergenic | 40.0% |
| !! | GAGGTTTGAGAAGTATTTGG+AGG | - | chr3.1:81862798-81862817 | MS.gene32857:CDS | 40.0% |
| !! | GATGAACACTGATTTCCAGA+AGG | - | chr3.1:81863176-81863195 | MS.gene32857:CDS | 40.0% |
| !! | GGGGTTTAACTTGAACCAAA+GGG | + | chr3.1:81862099-81862118 | None:intergenic | 40.0% |
| !! | GGGTTTAACTTGAACCAAAG+GGG | + | chr3.1:81862098-81862117 | None:intergenic | 40.0% |
| !! | GGTTTAACTTGAACCAAAGG+GGG | + | chr3.1:81862097-81862116 | None:intergenic | 40.0% |
| !! | GGTTTAACTTGAACGAAAGG+AGG | + | chr3.1:81862076-81862095 | None:intergenic | 40.0% |
| !! | GTGGATGATTTGCTCAAGAA+AGG | - | chr3.1:81862937-81862956 | MS.gene32857:CDS | 40.0% |
| !! | TGGCTAAGAAGCTTGTTGAA+CGG | - | chr3.1:81862365-81862384 | MS.gene32857:CDS | 40.0% |
| !! | TGTGTGAGAGTATTGCAAAG+AGG | - | chr3.1:81862557-81862576 | MS.gene32857:CDS | 40.0% |
| !! | TTTGTGAGGAAGATGGATTG+GGG | - | chr3.1:81863153-81863172 | MS.gene32857:CDS | 40.0% |
| !!! | GATGGAAGTTTTGTTAGTGG+TGG | + | chr3.1:81861522-81861541 | None:intergenic | 40.0% |
| !!! | GTGGGTTTTGGTTTGTTTGA+AGG | + | chr3.1:81861571-81861590 | None:intergenic | 40.0% |
| !!! | TTAGTGTCATTGGTGGGTTT+TGG | + | chr3.1:81861583-81861602 | None:intergenic | 40.0% |
| AAACTTGTCTGTAACCTCCG+CGG | - | chr3.1:81861743-81861762 | MS.gene32857:CDS | 45.0% | |
| ACAAGTTTAAGGGTGGTGAG+TGG | + | chr3.1:81861731-81861750 | None:intergenic | 45.0% | |
| ACCATGCTAGTTGAAGTCTC+CGG | + | chr3.1:81861700-81861719 | None:intergenic | 45.0% | |
| AGTCCAAGACAGAGTTTGTG+AGG | - | chr3.1:81863139-81863158 | MS.gene32857:CDS | 45.0% | |
| ATCCTTTACCGTCTTCTGCA+AGG | - | chr3.1:81861902-81861921 | MS.gene32857:CDS | 45.0% | |
| ATGGTGAAACCAAAGAGCAG+CGG | + | chr3.1:81861810-81861829 | None:intergenic | 45.0% | |
| ATTTGGAGGATGTGAAAGCG+GGG | - | chr3.1:81862812-81862831 | MS.gene32857:CDS | 45.0% | |
| CAAGTTTAAGGGTGGTGAGT+GGG | + | chr3.1:81861730-81861749 | None:intergenic | 45.0% | |
| CATCTGCTGACAGACAATGA+AGG | - | chr3.1:81863510-81863529 | MS.gene32857:CDS | 45.0% | |
| CCTCAGCTTCATGTGATTCA+GGG | - | chr3.1:81863105-81863124 | MS.gene32857:CDS | 45.0% | |
| CGCTGTAAATGGGAATCTCA+AGG | - | chr3.1:81863221-81863240 | MS.gene32857:CDS | 45.0% | |
| CTCAGCTTCATGTGATTCAG+GGG | - | chr3.1:81863106-81863125 | MS.gene32857:CDS | 45.0% | |
| CTGAATTGTGTGAGGAACCT+TGG | - | chr3.1:81863052-81863071 | MS.gene32857:CDS | 45.0% | |
| CTTCATTGTCTGTCAGCAGA+TGG | + | chr3.1:81863512-81863531 | None:intergenic | 45.0% | |
| CTTCCTCACAAACTCTGTCT+TGG | + | chr3.1:81863145-81863164 | None:intergenic | 45.0% | |
| GAAGGTGATATAAGCCCTCT+AGG | - | chr3.1:81863528-81863547 | MS.gene32857:CDS | 45.0% | |
| GACAGAGTTTGTGAGGAAGA+TGG | - | chr3.1:81863146-81863165 | MS.gene32857:CDS | 45.0% | |
| GACATTATTCGGTCTTTGGG+GGG | - | chr3.1:81862871-81862890 | MS.gene32857:CDS | 45.0% | |
| GGAAGAAGAAGTCGAGACAT+GGG | + | chr3.1:81861643-81861662 | None:intergenic | 45.0% | |
| GGTTCGTGATCGTTTAAGGA+AGG | - | chr3.1:81862633-81862652 | MS.gene32857:CDS | 45.0% | |
| GTAATCACCTTCCCTTTCCA+AGG | + | chr3.1:81863072-81863091 | None:intergenic | 45.0% | |
| TACCTTGCAGAAGACGGTAA+AGG | + | chr3.1:81861907-81861926 | None:intergenic | 45.0% | |
| TCAGCTTCATGTGATTCAGG+GGG | - | chr3.1:81863107-81863126 | MS.gene32857:CDS | 45.0% | |
| TGCTCAAGAAAGGGAAGATG+AGG | - | chr3.1:81862947-81862966 | MS.gene32857:CDS | 45.0% | |
| TGGAAGAAGAAGTCGAGACA+TGG | + | chr3.1:81861644-81861663 | None:intergenic | 45.0% | |
| TGTGTGAGGAACCTTGGAAA+GGG | - | chr3.1:81863058-81863077 | MS.gene32857:CDS | 45.0% | |
| TGTTGGTACCTTGCAGAAGA+CGG | + | chr3.1:81861913-81861932 | None:intergenic | 45.0% | |
| TGTTTATTGGGGCCAATCGA+TGG | - | chr3.1:81862698-81862717 | MS.gene32857:CDS | 45.0% | |
| TTGCTGTGTGTGATGTCTCT+GGG | - | chr3.1:81862977-81862996 | MS.gene32857:CDS | 45.0% | |
| TTGGAATCTGAGAGACTCGA+TGG | - | chr3.1:81863389-81863408 | MS.gene32857:CDS | 45.0% | |
| TTGTGTGAGGAACCTTGGAA+AGG | - | chr3.1:81863057-81863076 | MS.gene32857:CDS | 45.0% | |
| ! | AGGAGGCGCATTATGCTTAT+AGG | - | chr3.1:81862611-81862630 | MS.gene32857:CDS | 45.0% |
| ! | ATGTCTCTGGGAGTATGACT+GGG | - | chr3.1:81862989-81863008 | MS.gene32857:CDS | 45.0% |
| ! | CATTAGAAGCCAGGGTTTTG+GGG | + | chr3.1:81861838-81861857 | None:intergenic | 45.0% |
| ! | CGTTCAAGTTAAACCCCCTT+TGG | - | chr3.1:81862081-81862100 | MS.gene32857:CDS | 45.0% |
| ! | GACATTAGAAGCCAGGGTTT+TGG | + | chr3.1:81861840-81861859 | None:intergenic | 45.0% |
| ! | GAGTTGCCTGAGGTGTTTAT+TGG | - | chr3.1:81862685-81862704 | MS.gene32857:CDS | 45.0% |
| ! | GGAGGCGCATTATGCTTATA+GGG | - | chr3.1:81862612-81862631 | MS.gene32857:CDS | 45.0% |
| ! | GGTTCAAGTTAAACCCCCTT+TGG | - | chr3.1:81862102-81862121 | MS.gene32857:CDS | 45.0% |
| ! | GTTGCCTGAGGTGTTTATTG+GGG | - | chr3.1:81862687-81862706 | MS.gene32857:CDS | 45.0% |
| ! | GTTGGTGTCTGAATTGTGTG+AGG | - | chr3.1:81863044-81863063 | MS.gene32857:CDS | 45.0% |
| ! | TATAAGCCCTCTAGGAGCTA+TGG | - | chr3.1:81863536-81863555 | MS.gene32857:CDS | 45.0% |
| ! | TTTCCTAGGGAGGAGTATGA+AGG | - | chr3.1:81862583-81862602 | MS.gene32857:CDS | 45.0% |
| !! | GGGGGTTTAACTTGAACCAA+AGG | + | chr3.1:81862100-81862119 | None:intergenic | 45.0% |
| !! | GGGGGTTTAACTTGAACGAA+AGG | + | chr3.1:81862079-81862098 | None:intergenic | 45.0% |
| !! | TTGTGAGGAAGATGGATTGG+GGG | - | chr3.1:81863154-81863173 | MS.gene32857:CDS | 45.0% |
| !!! | GAAGTACCGAAAAGGGGTTT+TGG | + | chr3.1:81862138-81862157 | None:intergenic | 45.0% |
| !!! | GGAAGTTTTGTTAGTGGTGG+CGG | + | chr3.1:81861519-81861538 | None:intergenic | 45.0% |
| AAGTCTCCGGAGGAGAGTTT+CGG | + | chr3.1:81861687-81861706 | None:intergenic | 50.0% | |
| AATGCCACACACACGTCCAT+AGG | + | chr3.1:81863018-81863037 | None:intergenic | 50.0% | |
| ACACCTTCATACTCCTCCCT+AGG | + | chr3.1:81862589-81862608 | None:intergenic | 50.0% | |
| ACAGACGCAACCCTGTTGTA+AGG | + | chr3.1:81862733-81862752 | None:intergenic | 50.0% | |
| ATGCCACACACACGTCCATA+GGG | + | chr3.1:81863017-81863036 | None:intergenic | 50.0% | |
| ATGCTAGTTGAAGTCTCCGG+AGG | + | chr3.1:81861697-81861716 | None:intergenic | 50.0% | |
| ATGGACGTGTGTGTGGCATT+GGG | - | chr3.1:81863018-81863037 | MS.gene32857:CDS | 50.0% | |
| CAGCTTCCATAGCTCCTAGA+GGG | + | chr3.1:81863545-81863564 | None:intergenic | 50.0% | |
| CCCTGAATCACATGAAGCTG+AGG | + | chr3.1:81863108-81863127 | None:intergenic | 50.0% | |
| GAGTATGACTGGGATCCCTA+TGG | - | chr3.1:81862999-81863018 | MS.gene32857:CDS | 50.0% | |
| GAGTGAAGAGATTGCGGTGA+GGG | - | chr3.1:81862186-81862205 | MS.gene32857:CDS | 50.0% | |
| GCCTCAGCTTCATGTGATTC+AGG | - | chr3.1:81863104-81863123 | MS.gene32857:CDS | 50.0% | |
| GCTATGGAAGCTGCAATTGC+TGG | - | chr3.1:81863552-81863571 | MS.gene32857:CDS | 50.0% | |
| GGAAGGGACATTAGAAGCCA+GGG | + | chr3.1:81861846-81861865 | None:intergenic | 50.0% | |
| GGAGTTACAGTGGACGAGAA+TGG | - | chr3.1:81862915-81862934 | MS.gene32857:CDS | 50.0% | |
| GGCATAGAAGCCTTCACGAT+CGG | + | chr3.1:81861789-81861808 | None:intergenic | 50.0% | |
| GTCCCTTCCCTTGCTGAATT+TGG | - | chr3.1:81861857-81861876 | MS.gene32857:CDS | 50.0% | |
| GTGACGGTGGTGTATATCTC+GGG | + | chr3.1:81861497-81861516 | None:intergenic | 50.0% | |
| GTTACAGTGGACGAGAATGG+TGG | - | chr3.1:81862918-81862937 | MS.gene32857:CDS | 50.0% | |
| TATGGACGTGTGTGTGGCAT+TGG | - | chr3.1:81863017-81863036 | MS.gene32857:CDS | 50.0% | |
| TCCGGAGACTTCAACTAGCA+TGG | - | chr3.1:81861696-81861715 | MS.gene32857:CDS | 50.0% | |
| TGAGGAACCTTGGAAAGGGA+AGG | - | chr3.1:81863062-81863081 | MS.gene32857:CDS | 50.0% | |
| TGAGTGAAGAGATTGCGGTG+AGG | - | chr3.1:81862185-81862204 | MS.gene32857:CDS | 50.0% | |
| TGCTGCGAAATGGTGTCCTT+CGG | - | chr3.1:81862504-81862523 | MS.gene32857:CDS | 50.0% | |
| TTACAACAGGGTTGCGTCTG+TGG | - | chr3.1:81862732-81862751 | MS.gene32857:CDS | 50.0% | |
| TTGGCCCCAATAAACACCTC+AGG | + | chr3.1:81862694-81862713 | None:intergenic | 50.0% | |
| ! | ATTATTCGGTCTTTGGGGGG+TGG | - | chr3.1:81862874-81862893 | MS.gene32857:CDS | 50.0% |
| ! | CTTGCTGTGTGTGATGTCTC+TGG | - | chr3.1:81862976-81862995 | MS.gene32857:CDS | 50.0% |
| ! | GATGTCTCTGGGAGTATGAC+TGG | - | chr3.1:81862988-81863007 | MS.gene32857:CDS | 50.0% |
| ! | GGTGACGGTGGTGTATATCT+CGG | + | chr3.1:81861498-81861517 | None:intergenic | 50.0% |
| ! | GTGTGTGGCATTGGGATTGT+TGG | - | chr3.1:81863026-81863045 | MS.gene32857:CDS | 50.0% |
| ! | TAGGGAGGAGTATGAAGGTG+TGG | - | chr3.1:81862588-81862607 | MS.gene32857:CDS | 50.0% |
| !! | AAGGGTGGTGAGTGGGTTAT+AGG | + | chr3.1:81861723-81861742 | None:intergenic | 50.0% |
| !! | TTTGTTAGTGGTGGCGGTGA+CGG | + | chr3.1:81861513-81861532 | None:intergenic | 50.0% |
| !!! | GAAGGTTTTGGAGTTGCCTG+AGG | - | chr3.1:81862675-81862694 | MS.gene32857:CDS | 50.0% |
| ACGGTGGTGTATATCTCGGG+TGG | + | chr3.1:81861494-81861513 | None:intergenic | 55.0% | |
| AGAGATTGCGGTGAGGGATG+AGG | - | chr3.1:81862192-81862211 | MS.gene32857:CDS | 55.0% | |
| AGTCTCCGGAGGAGAGTTTC+GGG | + | chr3.1:81861686-81861705 | None:intergenic | 55.0% | |
| CGGTGGTGTATATCTCGGGT+GGG | + | chr3.1:81861493-81861512 | None:intergenic | 55.0% | |
| GATCCCTATGGACGTGTGTG+TGG | - | chr3.1:81863011-81863030 | MS.gene32857:CDS | 55.0% | |
| GCAGCTTCCATAGCTCCTAG+AGG | + | chr3.1:81863546-81863565 | None:intergenic | 55.0% | |
| GCTTCTATGCCGCTGCTCTT+TGG | - | chr3.1:81861798-81861817 | MS.gene32857:CDS | 55.0% | |
| GGGAAGGGACATTAGAAGCC+AGG | + | chr3.1:81861847-81861866 | None:intergenic | 55.0% | |
| ! | GGAGGAGTATGAAGGTGTGG+AGG | - | chr3.1:81862591-81862610 | MS.gene32857:CDS | 55.0% |
| ! | GGAGTATGAAGGTGTGGAGG+AGG | - | chr3.1:81862594-81862613 | MS.gene32857:CDS | 55.0% |
| !! | AAAGCAGTGGCGCTGGTAAG+TGG | - | chr3.1:81863435-81863454 | MS.gene32857:CDS | 55.0% |
| !! | AGGATGTGTTGGTGCCGTTG+AGG | - | chr3.1:81862653-81862672 | MS.gene32857:CDS | 55.0% |
| !! | TGTGTTGGTGCCGTTGAGGA+AGG | - | chr3.1:81862657-81862676 | MS.gene32857:CDS | 55.0% |
| !!! | GGTGCCGTTGAGGAAGGTTT+TGG | - | chr3.1:81862663-81862682 | MS.gene32857:CDS | 55.0% |
| !!! | TAGAAGCCAGGGTTTTGGGG+TGG | + | chr3.1:81861835-81861854 | None:intergenic | 55.0% |
| ACCGGCAAGTCCGATCGTGA+AGG | - | chr3.1:81861776-81861795 | MS.gene32857:CDS | 60.0% | |
| CACTCAGAAAGCAGTGGCGC+TGG | - | chr3.1:81863428-81863447 | MS.gene32857:CDS | 60.0% | |
| CAGCGCCACTGCTTTCTGAG+TGG | + | chr3.1:81863430-81863449 | None:intergenic | 60.0% | |
| CCATCACCACCCCAAAACCC+TGG | - | chr3.1:81861826-81861845 | MS.gene32857:CDS | 60.0% | |
| CTTTCTGAGTGGCCGGCACT+GGG | + | chr3.1:81863419-81863438 | None:intergenic | 60.0% | |
| GATCGGACTTGCCGGTACCA+CGG | + | chr3.1:81861772-81861791 | None:intergenic | 60.0% | |
| GCCACTGCTTTCTGAGTGGC+CGG | + | chr3.1:81863426-81863445 | None:intergenic | 60.0% | |
| GCCTTCACGATCGGACTTGC+CGG | + | chr3.1:81861780-81861799 | None:intergenic | 60.0% | |
| GGGAAGACTACGATCGCTGC+TGG | - | chr3.1:81862832-81862851 | MS.gene32857:CDS | 60.0% | |
| GTCTCCGGAGGAGAGTTTCG+GGG | + | chr3.1:81861685-81861704 | None:intergenic | 60.0% | |
| TCTCCGGAGGAGAGTTTCGG+GGG | + | chr3.1:81861684-81861703 | None:intergenic | 60.0% | |
| TTTCTGAGTGGCCGGCACTG+GGG | + | chr3.1:81863418-81863437 | None:intergenic | 60.0% | |
| ! | GAGAGTTTCGGGGGGAGTGT+CGG | + | chr3.1:81861675-81861694 | None:intergenic | 60.0% |
| ! | TCTTTGGGGGGTGGAGATGG+TGG | - | chr3.1:81862883-81862902 | MS.gene32857:CDS | 60.0% |
| !! | AGAGTTTCGGGGGGAGTGTC+GGG | + | chr3.1:81861674-81861693 | None:intergenic | 60.0% |
| !! | GAGAGGTGGCGGAGTTACAG+TGG | - | chr3.1:81862905-81862924 | MS.gene32857:CDS | 60.0% |
| !! | TGGAGATGGTGGAGAGGTGG+CGG | - | chr3.1:81862894-81862913 | MS.gene32857:CDS | 60.0% |
| !!! | CCAGGGTTTTGGGGTGGTGA+TGG | + | chr3.1:81861829-81861848 | None:intergenic | 60.0% |
| CAGGGTTGCGTCTGTGGCCA+TGG | - | chr3.1:81862738-81862757 | MS.gene32857:CDS | 65.0% | |
| CTCCCCCCGAAACTCTCCTC+CGG | - | chr3.1:81861678-81861697 | MS.gene32857:CDS | 65.0% | |
| CTCCGGAGGAGAGTTTCGGG+GGG | + | chr3.1:81861683-81861702 | None:intergenic | 65.0% | |
| GCCGGCCACTCAGAAAGCAG+TGG | - | chr3.1:81863422-81863441 | MS.gene32857:CDS | 65.0% | |
| GCTTTCTGAGTGGCCGGCAC+TGG | + | chr3.1:81863420-81863439 | None:intergenic | 65.0% | |
| TGCGGTGAGGGATGAGGCGA+GGG | - | chr3.1:81862198-81862217 | MS.gene32857:CDS | 65.0% | |
| TGGGCCAACGAGTGTGGTGG+CGG | + | chr3.1:81861474-81861493 | None:intergenic | 65.0% | |
| TGTAACCTCCGCGGCATCCG+TGG | - | chr3.1:81861752-81861771 | MS.gene32857:CDS | 65.0% | |
| TTGCGGTGAGGGATGAGGCG+AGG | - | chr3.1:81862197-81862216 | MS.gene32857:CDS | 65.0% | |
| ! | CGGTCTTTGGGGGGTGGAGA+TGG | - | chr3.1:81862880-81862899 | MS.gene32857:CDS | 65.0% |
| !! | GAGTTTCGGGGGGAGTGTCG+GGG | + | chr3.1:81861673-81861692 | None:intergenic | 65.0% |
| !! | GGGGAGTGTCGGGGACAACA+TGG | + | chr3.1:81861664-81861683 | None:intergenic | 65.0% |
| !! | GGGTGGAGATGGTGGAGAGG+TGG | - | chr3.1:81862891-81862910 | MS.gene32857:CDS | 65.0% |
| !! | GTTAGTGGTGGCGGTGACGG+TGG | + | chr3.1:81861510-81861529 | None:intergenic | 65.0% |
| CTCCGCGGCATCCGTGGTAC+CGG | - | chr3.1:81861758-81861777 | MS.gene32857:CDS | 70.0% | |
| CTCGATGGCGACCCCAGTGC+CGG | - | chr3.1:81863404-81863423 | MS.gene32857:CDS | 70.0% | |
| CTCGGGTGGGCCAACGAGTG+TGG | + | chr3.1:81861480-81861499 | None:intergenic | 70.0% | |
| GAGGGATGAGGCGAGGGCTG+CGG | - | chr3.1:81862204-81862223 | MS.gene32857:CDS | 70.0% | |
| GCCACCGCCACCACACTCGT+TGG | - | chr3.1:81861467-81861486 | MS.gene32857:CDS | 70.0% | |
| GGCTGCGGCGAGGGCTAAGA+GGG | - | chr3.1:81862219-81862238 | MS.gene32857:CDS | 70.0% | |
| GGGTGGGCCAACGAGTGTGG+TGG | + | chr3.1:81861477-81861496 | None:intergenic | 70.0% | |
| TGCCGGTACCACGGATGCCG+CGG | + | chr3.1:81861763-81861782 | None:intergenic | 70.0% | |
| !! | GCCAACGAGTGTGGTGGCGG+TGG | + | chr3.1:81861471-81861490 | None:intergenic | 70.0% |
| !! | GGGGGGTGGAGATGGTGGAG+AGG | - | chr3.1:81862888-81862907 | MS.gene32857:CDS | 70.0% |
| ATGAGGCGAGGGCTGCGGCG+AGG | - | chr3.1:81862209-81862228 | MS.gene32857:CDS | 75.0% | |
| CGGTACCACGGATGCCGCGG+AGG | + | chr3.1:81861760-81861779 | None:intergenic | 75.0% | |
| GGGCTGCGGCGAGGGCTAAG+AGG | - | chr3.1:81862218-81862237 | MS.gene32857:CDS | 75.0% | |
| TGAGGCGAGGGCTGCGGCGA+GGG | - | chr3.1:81862210-81862229 | MS.gene32857:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 81861464 | 81863608 | 81861464 | ID=MS.gene32857 |
| chr3.1 | mRNA | 81861464 | 81863608 | 81861464 | ID=MS.gene32857.t1;Parent=MS.gene32857 |
| chr3.1 | exon | 81861464 | 81863608 | 81861464 | ID=MS.gene32857.t1.exon1;Parent=MS.gene32857.t1 |
| chr3.1 | CDS | 81861464 | 81863608 | 81861464 | ID=cds.MS.gene32857.t1;Parent=MS.gene32857.t1 |
| Gene Sequence |
| Protein sequence |
